pgBadger-
Global information
- Generated on Thu Aug 13 04:10:04 2026
- Log file: /project/archive/log/postgres/dbdev51/postgresql.log-20260812
- Parsed 645 log entries in 2s
- Log start from 2026-08-12 10:50:55 to 2026-08-12 18:22:15
-
Overview
Global Stats
- 5 Number of unique normalized queries
- 5 Number of queries
- 1m45s Total query duration
- 2026-08-12 10:53:07 First query
- 2026-08-12 14:07:57 Last query
- 1 queries/s at 2026-08-12 14:07:57 Query peak
- 1m45s Total query duration
- 0ms Prepare/parse total duration
- 0ms Bind total duration
- 1m45s Execute total duration
- 15 Number of events
- 3 Number of unique normalized events
- 9 Max number of times the same event was reported
- 0 Number of cancellation
- 0 Total number of automatic vacuums
- 0 Total number of automatic analyzes
- 0 Number temporary file
- 0 Max size of temporary file
- 0.00 B Average size of temporary file
- 73 Total number of sessions
- 14 sessions at 2026-08-12 15:02:35 Session peak
- 9d8h11m48s Total duration of sessions
- 3h4m16s Average duration of sessions
- 0 Average queries per session
- 1s439ms Average queries duration per session
- 3h4m14s Average idle time per session
- 73 Total number of connections
- 9 connections/s at 2026-08-12 15:02:35 Connection peak
- 2 Total number of databases
SQL Traffic
Key values
- 1 queries/s Query Peak
- 2026-08-12 14:07:57 Date
SELECT Traffic
Key values
- 0 queries/s Query Peak
- Date
INSERT/UPDATE/DELETE Traffic
Key values
- 1 queries/s Query Peak
- 2026-08-12 14:07:57 Date
Queries duration
Key values
- 1m45s Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Aug 12 10 4 0ms 20s107ms 20s55ms 40s211ms 40s211ms 40s211ms 11 0 0ms 0ms 0ms 0ms 0ms 0ms 14 1 0ms 24s842ms 24s842ms 24s842ms 24s842ms 24s842ms 15 0 0ms 0ms 0ms 0ms 0ms 0ms 18 0 0ms 0ms 0ms 0ms 0ms 0ms Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Aug 12 10 0 0 0ms 0ms 0ms 0ms 11 0 0 0ms 0ms 0ms 0ms 14 0 0 0ms 0ms 0ms 0ms 15 0 0 0ms 0ms 0ms 0ms 18 0 0 0ms 0ms 0ms 0ms Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Aug 12 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare Aug 12 10 0 4 4.00 0.00% 11 0 0 0.00 0.00% 14 0 1 1.00 0.00% 15 0 0 0.00 0.00% 18 0 0 0.00 0.00% Day Hour Count Average / Second Aug 12 10 0 0.00/s 11 0 0.00/s 14 43 0.01/s 15 30 0.01/s 18 0 0.00/s Day Hour Count Average Duration Average idle time Aug 12 10 0 0ms 0ms 11 0 0ms 0ms 14 34 5h47m39s 5h47m38s 15 34 10m19s 10m19s 18 5 4h16m1s 4h16m1s -
Connections
Established Connections
Key values
- 9 connections Connection Peak
- 2026-08-12 15:02:35 Date
Connections per database
Key values
- ctddev51 Main Database
- 73 connections Total
Connections per user
Key values
- pubeu Main User
- 73 connections Total
-
Sessions
Simultaneous sessions
Key values
- 14 sessions Session Peak
- 2026-08-12 15:02:35 Date
Histogram of session times
Key values
- 32 60000-600000ms duration
Sessions per database
Key values
- ctddev51 Main Database
- 73 sessions Total
Sessions per user
Key values
- pubeu Main User
- 73 sessions Total
Sessions per host
Key values
- 10.12.5.37 Main Host
- 73 sessions Total
Sessions per application
Key values
- unknown Main Application
- 73 sessions Total
Application Count Total Duration Average Duration pgAdmin 4 - CONN:3143212 1 1m28s 1m28s pgAdmin 4 - CONN:3554035 1 1m40s 1m40s pgAdmin 4 - CONN:5932459 1 1m40s 1m40s pgAdmin 4 - CONN:6433780 1 1m40s 1m40s pgAdmin 4 - CONN:6733208 2 1m40s 50s442ms pgAdmin 4 - CONN:77564 1 1m26s 1m26s pgAdmin 4 - CONN:9353275 1 1m40s 1m40s pgAdmin 4 - DB:ctddev51 2 1m41s 50s505ms pgAdmin 4 - DB:postgres 8 15s725ms 1s965ms unknown 55 9d7h58m32s 4h4m20s -
Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 103 buffers Checkpoint Peak
- 2026-08-12 10:51:05 Date
- 10.577 seconds Highest write time
- 0.001 seconds Sync time
Checkpoints Wal files
Key values
- 0 files Wal files usage Peak
- 2026-08-12 11:20:58 Date
Checkpoints distance
Key values
- 0.08 Mo Distance Peak
- 2026-08-12 11:20:58 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time Aug 12 10 103 10.577s 0.001s 10.596s 11 28 2.883s 0.001s 2.899s 14 12 1.278s 0.001s 1.294s 15 0 0s 0s 0s 18 0 0s 0s 0s Day Hour Added Removed Recycled Synced files Longest sync Average sync Aug 12 10 0 0 0 9 0.001s 0.001s 11 0 0 0 9 0.001s 0.001s 14 0 0 0 8 0.001s 0.001s 15 0 0 0 0 0s 0s 18 0 0 0 0 0s 0s Day Hour Count Avg time (sec) Aug 12 10 0 0s 11 0 0s 14 0 0s 15 0 0s 18 0 0s Day Hour Mean distance Mean estimate Aug 12 10 30.00 kB 3,455.00 kB 11 40.00 kB 3,114.00 kB 14 34.00 kB 2,806.00 kB 15 0.00 kB 0.00 kB 18 0.00 kB 0.00 kB -
Temporary Files
Size of temporary files
Key values
- 0 Temp Files size Peak
- Date
Size of temporary files (5 minutes period)
NO DATASET
Number of temporary files
Key values
- 0 per second Temp Files Peak
- Date
Number of temporary files (5 minutes period)
NO DATASET
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size Aug 12 10 0 0 0 11 0 0 0 14 0 0 0 15 0 0 0 18 0 0 0 -
Vacuums
Vacuums / Analyzes Distribution
Key values
- 0 sec Highest CPU-cost vacuum
Table
Database - Date
- 0 sec Highest CPU-cost analyze
Table
Database - Date
Autovacuum actions (5 minutes period)
NO DATASET
Average Autovacuum Duration
Key values
- 0 sec Highest CPU-cost vacuum
Table
Database - Date
Average Autovacuum Duration (5 minutes average)
NO DATASET
Analyzes per table
Key values
- unknown (0) Main table analyzed (database )
- 0 analyzes Total
Vacuums per table
Key values
- unknown (0) Main table vacuumed on database
- 0 vacuums Total
Tuples removed per table
Key values
- unknown (0) Main table with removed tuples on database
- 0 tuples Total removed
Pages removed per table
Key values
- unknown (0) Main table with removed pages on database unknown
- 0 pages Total removed
Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs Aug 12 10 0 0 11 0 0 14 0 0 15 0 0 18 0 0 - 0 sec Highest CPU-cost vacuum
-
Locks
Locks by types
Key values
- unknown Main Lock Type
- 0 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query NO DATASET
Queries that waited the most
Rank Wait time Query NO DATASET
-
Queries
Queries by type
Key values
- 0 Total read queries
- 5 Total write queries
Queries by database
Key values
- unknown Main database
- 4 Requests
- 1m20s (unknown)
- Main time consuming database
Queries by user
Key values
- unknown Main user
- 4 Requests
User Request type Count Duration qaeu Total 1 24s842ms cte 1 24s842ms unknown Total 4 1m20s cte 4 1m20s Duration by user
Key values
- 1m20s (unknown) Main time consuming user
User Request type Count Duration qaeu Total 1 24s842ms cte 1 24s842ms unknown Total 4 1m20s cte 4 1m20s Queries by host
Key values
- unknown Main host
- 5 Requests
- 1m45s (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 5 Requests
- 1m45s (unknown)
- Main time consuming application
Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2026-08-12 14:43:57 Date
Number of cancelled queries (5 minutes period)
NO DATASET
-
Top Queries
Histogram of query times
Key values
- 5 > 10000ms duration
Slowest individual queries
Rank Duration Query 1 24s842ms WITH anatomy AS ( SELECT chem_conc_id, array_agg(anatomy_id ORDER BY anatomy_id) AS anatomy_ids, string_agg(DISTINCT anatomy_nm_html || '^' || anatomy_acc_txt || '^' || position_seq || '^' || anatomy_acc_db_id || '^' || anatomy_nm, '|') AS anatomyTerms FROM chem_conc_anatomy cca GROUP BY chem_conc_id ), reference_groups AS ( SELECT cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, string_agg(DISTINCT r.acc_txt, '|') AS refAcc, COUNT(DISTINCT cc.reference_id) AS referenceCount FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id LEFT JOIN reference r ON r.id = cc.reference_id GROUP BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ), deduplicated_cc AS ( SELECT cc.*, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, a.anatomyTerms, ROW_NUMBER() OVER (PARTITION BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ORDER BY cc.id) AS rn FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id WHERE EXISTS ( SELECT 1 FROM chem_conc cc_ref LEFT JOIN anatomy a_ref ON a_ref.chem_conc_id = cc_ref.id WHERE cc_ref.chem_id IS NOT DISTINCT FROM cc.chem_id AND cc_ref.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND cc_ref.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND cc_ref.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND cc_ref.disease_id IS NOT DISTINCT FROM cc.disease_id AND cc_ref.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND cc_ref.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND cc_ref.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND COALESCE(a_ref.anatomy_ids, ARRAY[]::integer[]) = COALESCE(a.anatomy_ids, ARRAY[]::integer[]))) SELECT /* ChemConcentrationDao */ cc.chem_id AS chem_id, t.nm AS chem, t.nm_html AS chemNmHtml, t.acc_txt AS chemAcc, t.secondary_nm AS casRN, cc.chem_conc || ' ' || cc.chem_conc_uom_nm AS concentration, cc.ixn_qualifier_nm AS vivoVitro, cc.chem_conc_exp_route_nm AS expRoute, cc.taxon_nm_html AS organism, cc.anatomyTerms AS anatomyTerms, cc.anatomyTerms AS anatomyTermsSort, cc.action_type_cd AS directEvidence, cc.action_type_cd AS directEvidenceSort, d.nm AS diseasenm, d.acc_txt AS diseaseacc, d.acc_db_cd AS diseaseaccdbcd, d.id AS diseaseid, tx.nm AS taxonnm, tx.secondary_nm AS taxoncomnm, tx.id AS taxonid, tx.acc_txt AS taxonacc, rg.refAcc, rg.referenceCount, COUNT(*) OVER () fullRowCount FROM deduplicated_cc cc INNER JOIN term t ON cc.chem_id = t.id INNER JOIN term tx ON cc.taxon_id = tx.id LEFT JOIN term d ON cc.disease_id = d.id INNER JOIN reference_groups rg ON rg.chem_id IS NOT DISTINCT FROM cc.chem_id AND rg.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND rg.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND rg.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND rg.disease_id IS NOT DISTINCT FROM cc.disease_id AND rg.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND rg.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND rg.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND rg.anatomy_ids = cc.anatomy_ids WHERE cc.rn = 1 AND t.id in ( select distinct dp.descendant_object_id # 015 from dag_path dp # 015 WHERE dp.ancestor_object_id = '1539727') ORDER BY organism LIMIT 50;[ Date: 2026-08-12 14:07:57 - Database: ctddev51 - User: qaeu - Bind query: yes ]
2 20s107ms WITH anatomy AS ( SELECT chem_conc_id, array_agg(anatomy_id ORDER BY anatomy_id) AS anatomy_ids, string_agg(DISTINCT anatomy_nm_html || '^' || anatomy_acc_txt || '^' || position_seq || '^' || anatomy_acc_db_id || '^' || anatomy_nm, '|') AS anatomyTerms FROM chem_conc_anatomy cca GROUP BY chem_conc_id ), reference_groups AS ( SELECT cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, string_agg(DISTINCT r.acc_txt, '|') AS refAcc, COUNT(DISTINCT cc.reference_id) AS referenceCount FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id LEFT JOIN reference r ON r.id = cc.reference_id GROUP BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ), deduplicated_cc AS ( SELECT cc.*, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, a.anatomyTerms, ROW_NUMBER() OVER (PARTITION BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ORDER BY cc.id) AS rn FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id WHERE EXISTS ( SELECT 1 FROM chem_conc cc_ref LEFT JOIN anatomy a_ref ON a_ref.chem_conc_id = cc_ref.id WHERE cc_ref.chem_id IS NOT DISTINCT FROM cc.chem_id AND cc_ref.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND cc_ref.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND cc_ref.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND cc_ref.disease_id IS NOT DISTINCT FROM cc.disease_id AND cc_ref.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND cc_ref.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND cc_ref.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND COALESCE(a_ref.anatomy_ids, ARRAY[]::integer[]) = COALESCE(a.anatomy_ids, ARRAY[]::integer[]))) SELECT /* ChemConcentrationDao */ cc.chem_id AS chem_id, t.nm AS chem, t.nm_html AS chemNmHtml, t.acc_txt AS chemAcc, t.secondary_nm AS casRN, cc.chem_conc || ' ' || cc.chem_conc_uom_nm AS concentration, cc.ixn_qualifier_nm AS vivoVitro, cc.chem_conc_exp_route_nm AS expRoute, cc.taxon_nm_html AS organism, cc.anatomyTerms AS anatomyTerms, cc.anatomyTerms AS anatomyTermsSort, cc.action_type_cd AS directEvidence, cc.action_type_cd AS directEvidenceSort, d.nm AS diseasenm, d.acc_txt AS diseaseacc, d.acc_db_cd AS diseaseaccdbcd, d.id AS diseaseid, tx.nm AS taxonnm, tx.secondary_nm AS taxoncomnm, tx.id AS taxonid, tx.acc_txt AS taxonacc, rg.refAcc, rg.referenceCount, COUNT(*) OVER () fullRowCount FROM deduplicated_cc cc INNER JOIN term t ON cc.chem_id = t.id INNER JOIN term tx ON cc.taxon_id = tx.id LEFT JOIN term d ON cc.disease_id = d.id INNER JOIN reference_groups rg ON rg.chem_id IS NOT DISTINCT FROM cc.chem_id AND rg.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND rg.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND rg.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND rg.disease_id IS NOT DISTINCT FROM cc.disease_id AND rg.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND rg.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND rg.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND rg.anatomy_ids = cc.anatomy_ids WHERE cc.rn = 1 AND t.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1380020') ORDER BY organism LIMIT 50;[ Date: 2026-08-12 10:53:07 - Bind query: yes ]
3 20s103ms WITH anatomy AS ( SELECT chem_conc_id, array_agg(anatomy_id ORDER BY anatomy_id) AS anatomy_ids, string_agg(DISTINCT anatomy_nm_html || '^' || anatomy_acc_txt || '^' || position_seq || '^' || anatomy_acc_db_id || '^' || anatomy_nm, '|') AS anatomyTerms FROM chem_conc_anatomy cca GROUP BY chem_conc_id ), reference_groups AS ( SELECT cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, string_agg(DISTINCT r.acc_txt, '|') AS refAcc, COUNT(DISTINCT cc.reference_id) AS referenceCount FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id LEFT JOIN reference r ON r.id = cc.reference_id GROUP BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ), deduplicated_cc AS ( SELECT cc.*, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, a.anatomyTerms, ROW_NUMBER() OVER (PARTITION BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ORDER BY cc.id) AS rn FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id WHERE EXISTS ( SELECT 1 FROM chem_conc cc_ref LEFT JOIN anatomy a_ref ON a_ref.chem_conc_id = cc_ref.id WHERE cc_ref.chem_id IS NOT DISTINCT FROM cc.chem_id AND cc_ref.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND cc_ref.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND cc_ref.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND cc_ref.disease_id IS NOT DISTINCT FROM cc.disease_id AND cc_ref.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND cc_ref.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND cc_ref.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND COALESCE(a_ref.anatomy_ids, ARRAY[]::integer[]) = COALESCE(a.anatomy_ids, ARRAY[]::integer[]))) SELECT /* ChemConcentrationDao */ cc.chem_id AS chem_id, t.nm AS chem, t.nm_html AS chemNmHtml, t.acc_txt AS chemAcc, t.secondary_nm AS casRN, cc.chem_conc || ' ' || cc.chem_conc_uom_nm AS concentration, cc.ixn_qualifier_nm AS vivoVitro, cc.chem_conc_exp_route_nm AS expRoute, cc.taxon_nm_html AS organism, cc.anatomyTerms AS anatomyTerms, cc.anatomyTerms AS anatomyTermsSort, cc.action_type_cd AS directEvidence, cc.action_type_cd AS directEvidenceSort, d.nm AS diseasenm, d.acc_txt AS diseaseacc, d.acc_db_cd AS diseaseaccdbcd, d.id AS diseaseid, tx.nm AS taxonnm, tx.secondary_nm AS taxoncomnm, tx.id AS taxonid, tx.acc_txt AS taxonacc, rg.refAcc, rg.referenceCount, COUNT(*) OVER () fullRowCount FROM deduplicated_cc cc INNER JOIN term t ON cc.chem_id = t.id INNER JOIN term tx ON cc.taxon_id = tx.id LEFT JOIN term d ON cc.disease_id = d.id INNER JOIN reference_groups rg ON rg.chem_id IS NOT DISTINCT FROM cc.chem_id AND rg.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND rg.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND rg.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND rg.disease_id IS NOT DISTINCT FROM cc.disease_id AND rg.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND rg.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND rg.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND rg.anatomy_ids = cc.anatomy_ids WHERE cc.rn = 1 AND t.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1380020') ORDER BY organism DESC LIMIT 50;[ Date: 2026-08-12 10:53:39 - Bind query: yes ]
4 20s6ms WITH anatomy AS ( SELECT chem_conc_id, array_agg(anatomy_id ORDER BY anatomy_id) AS anatomy_ids, string_agg(DISTINCT anatomy_nm_html || '^' || anatomy_acc_txt || '^' || position_seq || '^' || anatomy_acc_db_id || '^' || anatomy_nm, '|') AS anatomyTerms FROM chem_conc_anatomy cca GROUP BY chem_conc_id ), reference_groups AS ( SELECT cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, string_agg(DISTINCT r.acc_txt, '|') AS refAcc, COUNT(DISTINCT cc.reference_id) AS referenceCount FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id LEFT JOIN reference r ON r.id = cc.reference_id GROUP BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ), deduplicated_cc AS ( SELECT cc.*, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, a.anatomyTerms, ROW_NUMBER() OVER (PARTITION BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ORDER BY cc.id) AS rn FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id WHERE EXISTS ( SELECT 1 FROM chem_conc cc_ref LEFT JOIN anatomy a_ref ON a_ref.chem_conc_id = cc_ref.id WHERE cc_ref.chem_id IS NOT DISTINCT FROM cc.chem_id AND cc_ref.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND cc_ref.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND cc_ref.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND cc_ref.disease_id IS NOT DISTINCT FROM cc.disease_id AND cc_ref.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND cc_ref.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND cc_ref.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND COALESCE(a_ref.anatomy_ids, ARRAY[]::integer[]) = COALESCE(a.anatomy_ids, ARRAY[]::integer[]))) SELECT /* ChemConcentrationDao */ cc.chem_id AS chem_id, t.nm AS chem, t.nm_html AS chemNmHtml, t.acc_txt AS chemAcc, t.secondary_nm AS casRN, cc.chem_conc || ' ' || cc.chem_conc_uom_nm AS concentration, cc.ixn_qualifier_nm AS vivoVitro, cc.chem_conc_exp_route_nm AS expRoute, cc.taxon_nm_html AS organism, cc.anatomyTerms AS anatomyTerms, cc.anatomyTerms AS anatomyTermsSort, cc.action_type_cd AS directEvidence, cc.action_type_cd AS directEvidenceSort, d.nm AS diseasenm, d.acc_txt AS diseaseacc, d.acc_db_cd AS diseaseaccdbcd, d.id AS diseaseid, tx.nm AS taxonnm, tx.secondary_nm AS taxoncomnm, tx.id AS taxonid, tx.acc_txt AS taxonacc, rg.refAcc, rg.referenceCount, COUNT(*) OVER () fullRowCount FROM deduplicated_cc cc INNER JOIN term t ON cc.chem_id = t.id INNER JOIN term tx ON cc.taxon_id = tx.id LEFT JOIN term d ON cc.disease_id = d.id INNER JOIN reference_groups rg ON rg.chem_id IS NOT DISTINCT FROM cc.chem_id AND rg.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND rg.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND rg.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND rg.disease_id IS NOT DISTINCT FROM cc.disease_id AND rg.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND rg.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND rg.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND rg.anatomy_ids = cc.anatomy_ids WHERE cc.rn = 1 AND t.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1380020') ORDER BY diseasenm, organism LIMIT 50;[ Date: 2026-08-12 10:54:12 - Bind query: yes ]
5 20s3ms WITH anatomy AS ( SELECT chem_conc_id, array_agg(anatomy_id ORDER BY anatomy_id) AS anatomy_ids, string_agg(DISTINCT anatomy_nm_html || '^' || anatomy_acc_txt || '^' || position_seq || '^' || anatomy_acc_db_id || '^' || anatomy_nm, '|') AS anatomyTerms FROM chem_conc_anatomy cca GROUP BY chem_conc_id ), reference_groups AS ( SELECT cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, string_agg(DISTINCT r.acc_txt, '|') AS refAcc, COUNT(DISTINCT cc.reference_id) AS referenceCount FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id LEFT JOIN reference r ON r.id = cc.reference_id GROUP BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ), deduplicated_cc AS ( SELECT cc.*, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, a.anatomyTerms, ROW_NUMBER() OVER (PARTITION BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ORDER BY cc.id) AS rn FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id WHERE EXISTS ( SELECT 1 FROM chem_conc cc_ref LEFT JOIN anatomy a_ref ON a_ref.chem_conc_id = cc_ref.id WHERE cc_ref.chem_id IS NOT DISTINCT FROM cc.chem_id AND cc_ref.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND cc_ref.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND cc_ref.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND cc_ref.disease_id IS NOT DISTINCT FROM cc.disease_id AND cc_ref.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND cc_ref.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND cc_ref.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND COALESCE(a_ref.anatomy_ids, ARRAY[]::integer[]) = COALESCE(a.anatomy_ids, ARRAY[]::integer[]))) SELECT /* ChemConcentrationDao */ cc.chem_id AS chem_id, t.nm AS chem, t.nm_html AS chemNmHtml, t.acc_txt AS chemAcc, t.secondary_nm AS casRN, cc.chem_conc || ' ' || cc.chem_conc_uom_nm AS concentration, cc.ixn_qualifier_nm AS vivoVitro, cc.chem_conc_exp_route_nm AS expRoute, cc.taxon_nm_html AS organism, cc.anatomyTerms AS anatomyTerms, cc.anatomyTerms AS anatomyTermsSort, cc.action_type_cd AS directEvidence, cc.action_type_cd AS directEvidenceSort, d.nm AS diseasenm, d.acc_txt AS diseaseacc, d.acc_db_cd AS diseaseaccdbcd, d.id AS diseaseid, tx.nm AS taxonnm, tx.secondary_nm AS taxoncomnm, tx.id AS taxonid, tx.acc_txt AS taxonacc, rg.refAcc, rg.referenceCount, COUNT(*) OVER () fullRowCount FROM deduplicated_cc cc INNER JOIN term t ON cc.chem_id = t.id INNER JOIN term tx ON cc.taxon_id = tx.id LEFT JOIN term d ON cc.disease_id = d.id INNER JOIN reference_groups rg ON rg.chem_id IS NOT DISTINCT FROM cc.chem_id AND rg.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND rg.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND rg.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND rg.disease_id IS NOT DISTINCT FROM cc.disease_id AND rg.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND rg.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND rg.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND rg.anatomy_ids = cc.anatomy_ids WHERE cc.rn = 1 AND t.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1380020') ORDER BY diseasenm, organism LIMIT 50 OFFSET 300;[ Date: 2026-08-12 10:54:56 - Bind query: yes ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 24s842ms 1 24s842ms 24s842ms 24s842ms with anatomy as ( select chem_conc_id, array_agg(anatomy_id order by anatomy_id) as anatomy_ids, string_agg(distinct anatomy_nm_html || ? || anatomy_acc_txt || ? || position_seq || ? || anatomy_acc_db_id || ? || anatomy_nm, ?) as anatomyterms from chem_conc_anatomy cca group by chem_conc_id ), reference_groups as ( select cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, string_agg(distinct r.acc_txt, ?) as refacc, count(distinct cc.reference_id) as referencecount from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id left join reference r on r.id = cc.reference_id group by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) ), deduplicated_cc as ( select cc.*, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, a.anatomyterms, row_number() over (partition by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) order by cc.id) as rn from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id where exists ( select ? from chem_conc cc_ref left join anatomy a_ref on a_ref.chem_conc_id = cc_ref.id where cc_ref.chem_id is not distinct from cc.chem_id and cc_ref.chem_conc is not distinct from cc.chem_conc and cc_ref.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and cc_ref.taxon_id is not distinct from cc.taxon_id and cc_ref.disease_id is not distinct from cc.disease_id and cc_ref.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and cc_ref.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and cc_ref.action_type_cd is not distinct from cc.action_type_cd and coalesce(a_ref.anatomy_ids, array[]::integer[]) = coalesce(a.anatomy_ids, array[]::integer[]))) select cc.chem_id as chem_id, t.nm as chem, t.nm_html as chemnmhtml, t.acc_txt as chemacc, t.secondary_nm as casrn, cc.chem_conc || ? || cc.chem_conc_uom_nm as concentration, cc.ixn_qualifier_nm as vivovitro, cc.chem_conc_exp_route_nm as exproute, cc.taxon_nm_html as organism, cc.anatomyterms as anatomyterms, cc.anatomyterms as anatomytermssort, cc.action_type_cd as directevidence, cc.action_type_cd as directevidencesort, d.nm as diseasenm, d.acc_txt as diseaseacc, d.acc_db_cd as diseaseaccdbcd, d.id as diseaseid, tx.nm as taxonnm, tx.secondary_nm as taxoncomnm, tx.id as taxonid, tx.acc_txt as taxonacc, rg.refacc, rg.referencecount, count(*) over () fullrowcount from deduplicated_cc cc inner join term t on cc.chem_id = t.id inner join term tx on cc.taxon_id = tx.id left join term d on cc.disease_id = d.id inner join reference_groups rg on rg.chem_id is not distinct from cc.chem_id and rg.chem_conc is not distinct from cc.chem_conc and rg.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and rg.taxon_id is not distinct from cc.taxon_id and rg.disease_id is not distinct from cc.disease_id and rg.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and rg.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and rg.action_type_cd is not distinct from cc.action_type_cd and rg.anatomy_ids = cc.anatomy_ids where cc.rn = ? and t.id in ( select distinct dp.descendant_object_id # ? from dag_path dp # ? where dp.ancestor_object_id = ?) order by organism limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Aug 12 14 1 24s842ms 24s842ms [ User: qaeu - Total duration: 24s842ms - Times executed: 1 ]
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WITH anatomy AS ( SELECT chem_conc_id, array_agg(anatomy_id ORDER BY anatomy_id) AS anatomy_ids, string_agg(DISTINCT anatomy_nm_html || '^' || anatomy_acc_txt || '^' || position_seq || '^' || anatomy_acc_db_id || '^' || anatomy_nm, '|') AS anatomyTerms FROM chem_conc_anatomy cca GROUP BY chem_conc_id ), reference_groups AS ( SELECT cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, string_agg(DISTINCT r.acc_txt, '|') AS refAcc, COUNT(DISTINCT cc.reference_id) AS referenceCount FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id LEFT JOIN reference r ON r.id = cc.reference_id GROUP BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ), deduplicated_cc AS ( SELECT cc.*, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, a.anatomyTerms, ROW_NUMBER() OVER (PARTITION BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ORDER BY cc.id) AS rn FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id WHERE EXISTS ( SELECT 1 FROM chem_conc cc_ref LEFT JOIN anatomy a_ref ON a_ref.chem_conc_id = cc_ref.id WHERE cc_ref.chem_id IS NOT DISTINCT FROM cc.chem_id AND cc_ref.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND cc_ref.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND cc_ref.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND cc_ref.disease_id IS NOT DISTINCT FROM cc.disease_id AND cc_ref.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND cc_ref.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND cc_ref.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND COALESCE(a_ref.anatomy_ids, ARRAY[]::integer[]) = COALESCE(a.anatomy_ids, ARRAY[]::integer[]))) SELECT /* ChemConcentrationDao */ cc.chem_id AS chem_id, t.nm AS chem, t.nm_html AS chemNmHtml, t.acc_txt AS chemAcc, t.secondary_nm AS casRN, cc.chem_conc || ' ' || cc.chem_conc_uom_nm AS concentration, cc.ixn_qualifier_nm AS vivoVitro, cc.chem_conc_exp_route_nm AS expRoute, cc.taxon_nm_html AS organism, cc.anatomyTerms AS anatomyTerms, cc.anatomyTerms AS anatomyTermsSort, cc.action_type_cd AS directEvidence, cc.action_type_cd AS directEvidenceSort, d.nm AS diseasenm, d.acc_txt AS diseaseacc, d.acc_db_cd AS diseaseaccdbcd, d.id AS diseaseid, tx.nm AS taxonnm, tx.secondary_nm AS taxoncomnm, tx.id AS taxonid, tx.acc_txt AS taxonacc, rg.refAcc, rg.referenceCount, COUNT(*) OVER () fullRowCount FROM deduplicated_cc cc INNER JOIN term t ON cc.chem_id = t.id INNER JOIN term tx ON cc.taxon_id = tx.id LEFT JOIN term d ON cc.disease_id = d.id INNER JOIN reference_groups rg ON rg.chem_id IS NOT DISTINCT FROM cc.chem_id AND rg.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND rg.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND rg.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND rg.disease_id IS NOT DISTINCT FROM cc.disease_id AND rg.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND rg.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND rg.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND rg.anatomy_ids = cc.anatomy_ids WHERE cc.rn = 1 AND t.id in ( select distinct dp.descendant_object_id # 015 from dag_path dp # 015 WHERE dp.ancestor_object_id = '1539727') ORDER BY organism LIMIT 50;
Date: 2026-08-12 14:07:57 Duration: 24s842ms Database: ctddev51 User: qaeu Bind query: yes
2 20s107ms 1 20s107ms 20s107ms 20s107ms with anatomy as ( select chem_conc_id, array_agg(anatomy_id order by anatomy_id) as anatomy_ids, string_agg(distinct anatomy_nm_html || ? || anatomy_acc_txt || ? || position_seq || ? || anatomy_acc_db_id || ? || anatomy_nm, ?) as anatomyterms from chem_conc_anatomy cca group by chem_conc_id ), reference_groups as ( select cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, string_agg(distinct r.acc_txt, ?) as refacc, count(distinct cc.reference_id) as referencecount from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id left join reference r on r.id = cc.reference_id group by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) ), deduplicated_cc as ( select cc.*, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, a.anatomyterms, row_number() over (partition by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) order by cc.id) as rn from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id where exists ( select ? from chem_conc cc_ref left join anatomy a_ref on a_ref.chem_conc_id = cc_ref.id where cc_ref.chem_id is not distinct from cc.chem_id and cc_ref.chem_conc is not distinct from cc.chem_conc and cc_ref.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and cc_ref.taxon_id is not distinct from cc.taxon_id and cc_ref.disease_id is not distinct from cc.disease_id and cc_ref.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and cc_ref.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and cc_ref.action_type_cd is not distinct from cc.action_type_cd and coalesce(a_ref.anatomy_ids, array[]::integer[]) = coalesce(a.anatomy_ids, array[]::integer[]))) select cc.chem_id as chem_id, t.nm as chem, t.nm_html as chemnmhtml, t.acc_txt as chemacc, t.secondary_nm as casrn, cc.chem_conc || ? || cc.chem_conc_uom_nm as concentration, cc.ixn_qualifier_nm as vivovitro, cc.chem_conc_exp_route_nm as exproute, cc.taxon_nm_html as organism, cc.anatomyterms as anatomyterms, cc.anatomyterms as anatomytermssort, cc.action_type_cd as directevidence, cc.action_type_cd as directevidencesort, d.nm as diseasenm, d.acc_txt as diseaseacc, d.acc_db_cd as diseaseaccdbcd, d.id as diseaseid, tx.nm as taxonnm, tx.secondary_nm as taxoncomnm, tx.id as taxonid, tx.acc_txt as taxonacc, rg.refacc, rg.referencecount, count(*) over () fullrowcount from deduplicated_cc cc inner join term t on cc.chem_id = t.id inner join term tx on cc.taxon_id = tx.id left join term d on cc.disease_id = d.id inner join reference_groups rg on rg.chem_id is not distinct from cc.chem_id and rg.chem_conc is not distinct from cc.chem_conc and rg.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and rg.taxon_id is not distinct from cc.taxon_id and rg.disease_id is not distinct from cc.disease_id and rg.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and rg.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and rg.action_type_cd is not distinct from cc.action_type_cd and rg.anatomy_ids = cc.anatomy_ids where cc.rn = ? and t.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) order by organism limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Aug 12 10 1 20s107ms 20s107ms -
WITH anatomy AS ( SELECT chem_conc_id, array_agg(anatomy_id ORDER BY anatomy_id) AS anatomy_ids, string_agg(DISTINCT anatomy_nm_html || '^' || anatomy_acc_txt || '^' || position_seq || '^' || anatomy_acc_db_id || '^' || anatomy_nm, '|') AS anatomyTerms FROM chem_conc_anatomy cca GROUP BY chem_conc_id ), reference_groups AS ( SELECT cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, string_agg(DISTINCT r.acc_txt, '|') AS refAcc, COUNT(DISTINCT cc.reference_id) AS referenceCount FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id LEFT JOIN reference r ON r.id = cc.reference_id GROUP BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ), deduplicated_cc AS ( SELECT cc.*, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, a.anatomyTerms, ROW_NUMBER() OVER (PARTITION BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ORDER BY cc.id) AS rn FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id WHERE EXISTS ( SELECT 1 FROM chem_conc cc_ref LEFT JOIN anatomy a_ref ON a_ref.chem_conc_id = cc_ref.id WHERE cc_ref.chem_id IS NOT DISTINCT FROM cc.chem_id AND cc_ref.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND cc_ref.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND cc_ref.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND cc_ref.disease_id IS NOT DISTINCT FROM cc.disease_id AND cc_ref.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND cc_ref.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND cc_ref.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND COALESCE(a_ref.anatomy_ids, ARRAY[]::integer[]) = COALESCE(a.anatomy_ids, ARRAY[]::integer[]))) SELECT /* ChemConcentrationDao */ cc.chem_id AS chem_id, t.nm AS chem, t.nm_html AS chemNmHtml, t.acc_txt AS chemAcc, t.secondary_nm AS casRN, cc.chem_conc || ' ' || cc.chem_conc_uom_nm AS concentration, cc.ixn_qualifier_nm AS vivoVitro, cc.chem_conc_exp_route_nm AS expRoute, cc.taxon_nm_html AS organism, cc.anatomyTerms AS anatomyTerms, cc.anatomyTerms AS anatomyTermsSort, cc.action_type_cd AS directEvidence, cc.action_type_cd AS directEvidenceSort, d.nm AS diseasenm, d.acc_txt AS diseaseacc, d.acc_db_cd AS diseaseaccdbcd, d.id AS diseaseid, tx.nm AS taxonnm, tx.secondary_nm AS taxoncomnm, tx.id AS taxonid, tx.acc_txt AS taxonacc, rg.refAcc, rg.referenceCount, COUNT(*) OVER () fullRowCount FROM deduplicated_cc cc INNER JOIN term t ON cc.chem_id = t.id INNER JOIN term tx ON cc.taxon_id = tx.id LEFT JOIN term d ON cc.disease_id = d.id INNER JOIN reference_groups rg ON rg.chem_id IS NOT DISTINCT FROM cc.chem_id AND rg.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND rg.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND rg.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND rg.disease_id IS NOT DISTINCT FROM cc.disease_id AND rg.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND rg.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND rg.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND rg.anatomy_ids = cc.anatomy_ids WHERE cc.rn = 1 AND t.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1380020') ORDER BY organism LIMIT 50;
Date: 2026-08-12 10:53:07 Duration: 20s107ms Bind query: yes
3 20s103ms 1 20s103ms 20s103ms 20s103ms with anatomy as ( select chem_conc_id, array_agg(anatomy_id order by anatomy_id) as anatomy_ids, string_agg(distinct anatomy_nm_html || ? || anatomy_acc_txt || ? || position_seq || ? || anatomy_acc_db_id || ? || anatomy_nm, ?) as anatomyterms from chem_conc_anatomy cca group by chem_conc_id ), reference_groups as ( select cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, string_agg(distinct r.acc_txt, ?) as refacc, count(distinct cc.reference_id) as referencecount from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id left join reference r on r.id = cc.reference_id group by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) ), deduplicated_cc as ( select cc.*, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, a.anatomyterms, row_number() over (partition by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) order by cc.id) as rn from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id where exists ( select ? from chem_conc cc_ref left join anatomy a_ref on a_ref.chem_conc_id = cc_ref.id where cc_ref.chem_id is not distinct from cc.chem_id and cc_ref.chem_conc is not distinct from cc.chem_conc and cc_ref.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and cc_ref.taxon_id is not distinct from cc.taxon_id and cc_ref.disease_id is not distinct from cc.disease_id and cc_ref.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and cc_ref.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and cc_ref.action_type_cd is not distinct from cc.action_type_cd and coalesce(a_ref.anatomy_ids, array[]::integer[]) = coalesce(a.anatomy_ids, array[]::integer[]))) select cc.chem_id as chem_id, t.nm as chem, t.nm_html as chemnmhtml, t.acc_txt as chemacc, t.secondary_nm as casrn, cc.chem_conc || ? || cc.chem_conc_uom_nm as concentration, cc.ixn_qualifier_nm as vivovitro, cc.chem_conc_exp_route_nm as exproute, cc.taxon_nm_html as organism, cc.anatomyterms as anatomyterms, cc.anatomyterms as anatomytermssort, cc.action_type_cd as directevidence, cc.action_type_cd as directevidencesort, d.nm as diseasenm, d.acc_txt as diseaseacc, d.acc_db_cd as diseaseaccdbcd, d.id as diseaseid, tx.nm as taxonnm, tx.secondary_nm as taxoncomnm, tx.id as taxonid, tx.acc_txt as taxonacc, rg.refacc, rg.referencecount, count(*) over () fullrowcount from deduplicated_cc cc inner join term t on cc.chem_id = t.id inner join term tx on cc.taxon_id = tx.id left join term d on cc.disease_id = d.id inner join reference_groups rg on rg.chem_id is not distinct from cc.chem_id and rg.chem_conc is not distinct from cc.chem_conc and rg.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and rg.taxon_id is not distinct from cc.taxon_id and rg.disease_id is not distinct from cc.disease_id and rg.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and rg.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and rg.action_type_cd is not distinct from cc.action_type_cd and rg.anatomy_ids = cc.anatomy_ids where cc.rn = ? and t.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) order by organism desc limit ?;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Aug 12 10 1 20s103ms 20s103ms -
WITH anatomy AS ( SELECT chem_conc_id, array_agg(anatomy_id ORDER BY anatomy_id) AS anatomy_ids, string_agg(DISTINCT anatomy_nm_html || '^' || anatomy_acc_txt || '^' || position_seq || '^' || anatomy_acc_db_id || '^' || anatomy_nm, '|') AS anatomyTerms FROM chem_conc_anatomy cca GROUP BY chem_conc_id ), reference_groups AS ( SELECT cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, string_agg(DISTINCT r.acc_txt, '|') AS refAcc, COUNT(DISTINCT cc.reference_id) AS referenceCount FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id LEFT JOIN reference r ON r.id = cc.reference_id GROUP BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ), deduplicated_cc AS ( SELECT cc.*, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, a.anatomyTerms, ROW_NUMBER() OVER (PARTITION BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ORDER BY cc.id) AS rn FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id WHERE EXISTS ( SELECT 1 FROM chem_conc cc_ref LEFT JOIN anatomy a_ref ON a_ref.chem_conc_id = cc_ref.id WHERE cc_ref.chem_id IS NOT DISTINCT FROM cc.chem_id AND cc_ref.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND cc_ref.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND cc_ref.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND cc_ref.disease_id IS NOT DISTINCT FROM cc.disease_id AND cc_ref.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND cc_ref.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND cc_ref.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND COALESCE(a_ref.anatomy_ids, ARRAY[]::integer[]) = COALESCE(a.anatomy_ids, ARRAY[]::integer[]))) SELECT /* ChemConcentrationDao */ cc.chem_id AS chem_id, t.nm AS chem, t.nm_html AS chemNmHtml, t.acc_txt AS chemAcc, t.secondary_nm AS casRN, cc.chem_conc || ' ' || cc.chem_conc_uom_nm AS concentration, cc.ixn_qualifier_nm AS vivoVitro, cc.chem_conc_exp_route_nm AS expRoute, cc.taxon_nm_html AS organism, cc.anatomyTerms AS anatomyTerms, cc.anatomyTerms AS anatomyTermsSort, cc.action_type_cd AS directEvidence, cc.action_type_cd AS directEvidenceSort, d.nm AS diseasenm, d.acc_txt AS diseaseacc, d.acc_db_cd AS diseaseaccdbcd, d.id AS diseaseid, tx.nm AS taxonnm, tx.secondary_nm AS taxoncomnm, tx.id AS taxonid, tx.acc_txt AS taxonacc, rg.refAcc, rg.referenceCount, COUNT(*) OVER () fullRowCount FROM deduplicated_cc cc INNER JOIN term t ON cc.chem_id = t.id INNER JOIN term tx ON cc.taxon_id = tx.id LEFT JOIN term d ON cc.disease_id = d.id INNER JOIN reference_groups rg ON rg.chem_id IS NOT DISTINCT FROM cc.chem_id AND rg.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND rg.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND rg.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND rg.disease_id IS NOT DISTINCT FROM cc.disease_id AND rg.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND rg.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND rg.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND rg.anatomy_ids = cc.anatomy_ids WHERE cc.rn = 1 AND t.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1380020') ORDER BY organism DESC LIMIT 50;
Date: 2026-08-12 10:53:39 Duration: 20s103ms Bind query: yes
4 20s6ms 1 20s6ms 20s6ms 20s6ms with anatomy as ( select chem_conc_id, array_agg(anatomy_id order by anatomy_id) as anatomy_ids, string_agg(distinct anatomy_nm_html || ? || anatomy_acc_txt || ? || position_seq || ? || anatomy_acc_db_id || ? || anatomy_nm, ?) as anatomyterms from chem_conc_anatomy cca group by chem_conc_id ), reference_groups as ( select cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, string_agg(distinct r.acc_txt, ?) as refacc, count(distinct cc.reference_id) as referencecount from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id left join reference r on r.id = cc.reference_id group by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) ), deduplicated_cc as ( select cc.*, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, a.anatomyterms, row_number() over (partition by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) order by cc.id) as rn from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id where exists ( select ? from chem_conc cc_ref left join anatomy a_ref on a_ref.chem_conc_id = cc_ref.id where cc_ref.chem_id is not distinct from cc.chem_id and cc_ref.chem_conc is not distinct from cc.chem_conc and cc_ref.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and cc_ref.taxon_id is not distinct from cc.taxon_id and cc_ref.disease_id is not distinct from cc.disease_id and cc_ref.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and cc_ref.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and cc_ref.action_type_cd is not distinct from cc.action_type_cd and coalesce(a_ref.anatomy_ids, array[]::integer[]) = coalesce(a.anatomy_ids, array[]::integer[]))) select cc.chem_id as chem_id, t.nm as chem, t.nm_html as chemnmhtml, t.acc_txt as chemacc, t.secondary_nm as casrn, cc.chem_conc || ? || cc.chem_conc_uom_nm as concentration, cc.ixn_qualifier_nm as vivovitro, cc.chem_conc_exp_route_nm as exproute, cc.taxon_nm_html as organism, cc.anatomyterms as anatomyterms, cc.anatomyterms as anatomytermssort, cc.action_type_cd as directevidence, cc.action_type_cd as directevidencesort, d.nm as diseasenm, d.acc_txt as diseaseacc, d.acc_db_cd as diseaseaccdbcd, d.id as diseaseid, tx.nm as taxonnm, tx.secondary_nm as taxoncomnm, tx.id as taxonid, tx.acc_txt as taxonacc, rg.refacc, rg.referencecount, count(*) over () fullrowcount from deduplicated_cc cc inner join term t on cc.chem_id = t.id inner join term tx on cc.taxon_id = tx.id left join term d on cc.disease_id = d.id inner join reference_groups rg on rg.chem_id is not distinct from cc.chem_id and rg.chem_conc is not distinct from cc.chem_conc and rg.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and rg.taxon_id is not distinct from cc.taxon_id and rg.disease_id is not distinct from cc.disease_id and rg.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and rg.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and rg.action_type_cd is not distinct from cc.action_type_cd and rg.anatomy_ids = cc.anatomy_ids where cc.rn = ? and t.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) order by diseasenm, organism limit ?;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Aug 12 10 1 20s6ms 20s6ms -
WITH anatomy AS ( SELECT chem_conc_id, array_agg(anatomy_id ORDER BY anatomy_id) AS anatomy_ids, string_agg(DISTINCT anatomy_nm_html || '^' || anatomy_acc_txt || '^' || position_seq || '^' || anatomy_acc_db_id || '^' || anatomy_nm, '|') AS anatomyTerms FROM chem_conc_anatomy cca GROUP BY chem_conc_id ), reference_groups AS ( SELECT cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, string_agg(DISTINCT r.acc_txt, '|') AS refAcc, COUNT(DISTINCT cc.reference_id) AS referenceCount FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id LEFT JOIN reference r ON r.id = cc.reference_id GROUP BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ), deduplicated_cc AS ( SELECT cc.*, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, a.anatomyTerms, ROW_NUMBER() OVER (PARTITION BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ORDER BY cc.id) AS rn FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id WHERE EXISTS ( SELECT 1 FROM chem_conc cc_ref LEFT JOIN anatomy a_ref ON a_ref.chem_conc_id = cc_ref.id WHERE cc_ref.chem_id IS NOT DISTINCT FROM cc.chem_id AND cc_ref.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND cc_ref.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND cc_ref.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND cc_ref.disease_id IS NOT DISTINCT FROM cc.disease_id AND cc_ref.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND cc_ref.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND cc_ref.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND COALESCE(a_ref.anatomy_ids, ARRAY[]::integer[]) = COALESCE(a.anatomy_ids, ARRAY[]::integer[]))) SELECT /* ChemConcentrationDao */ cc.chem_id AS chem_id, t.nm AS chem, t.nm_html AS chemNmHtml, t.acc_txt AS chemAcc, t.secondary_nm AS casRN, cc.chem_conc || ' ' || cc.chem_conc_uom_nm AS concentration, cc.ixn_qualifier_nm AS vivoVitro, cc.chem_conc_exp_route_nm AS expRoute, cc.taxon_nm_html AS organism, cc.anatomyTerms AS anatomyTerms, cc.anatomyTerms AS anatomyTermsSort, cc.action_type_cd AS directEvidence, cc.action_type_cd AS directEvidenceSort, d.nm AS diseasenm, d.acc_txt AS diseaseacc, d.acc_db_cd AS diseaseaccdbcd, d.id AS diseaseid, tx.nm AS taxonnm, tx.secondary_nm AS taxoncomnm, tx.id AS taxonid, tx.acc_txt AS taxonacc, rg.refAcc, rg.referenceCount, COUNT(*) OVER () fullRowCount FROM deduplicated_cc cc INNER JOIN term t ON cc.chem_id = t.id INNER JOIN term tx ON cc.taxon_id = tx.id LEFT JOIN term d ON cc.disease_id = d.id INNER JOIN reference_groups rg ON rg.chem_id IS NOT DISTINCT FROM cc.chem_id AND rg.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND rg.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND rg.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND rg.disease_id IS NOT DISTINCT FROM cc.disease_id AND rg.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND rg.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND rg.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND rg.anatomy_ids = cc.anatomy_ids WHERE cc.rn = 1 AND t.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1380020') ORDER BY diseasenm, organism LIMIT 50;
Date: 2026-08-12 10:54:12 Duration: 20s6ms Bind query: yes
5 20s3ms 1 20s3ms 20s3ms 20s3ms with anatomy as ( select chem_conc_id, array_agg(anatomy_id order by anatomy_id) as anatomy_ids, string_agg(distinct anatomy_nm_html || ? || anatomy_acc_txt || ? || position_seq || ? || anatomy_acc_db_id || ? || anatomy_nm, ?) as anatomyterms from chem_conc_anatomy cca group by chem_conc_id ), reference_groups as ( select cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, string_agg(distinct r.acc_txt, ?) as refacc, count(distinct cc.reference_id) as referencecount from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id left join reference r on r.id = cc.reference_id group by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) ), deduplicated_cc as ( select cc.*, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, a.anatomyterms, row_number() over (partition by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) order by cc.id) as rn from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id where exists ( select ? from chem_conc cc_ref left join anatomy a_ref on a_ref.chem_conc_id = cc_ref.id where cc_ref.chem_id is not distinct from cc.chem_id and cc_ref.chem_conc is not distinct from cc.chem_conc and cc_ref.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and cc_ref.taxon_id is not distinct from cc.taxon_id and cc_ref.disease_id is not distinct from cc.disease_id and cc_ref.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and cc_ref.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and cc_ref.action_type_cd is not distinct from cc.action_type_cd and coalesce(a_ref.anatomy_ids, array[]::integer[]) = coalesce(a.anatomy_ids, array[]::integer[]))) select cc.chem_id as chem_id, t.nm as chem, t.nm_html as chemnmhtml, t.acc_txt as chemacc, t.secondary_nm as casrn, cc.chem_conc || ? || cc.chem_conc_uom_nm as concentration, cc.ixn_qualifier_nm as vivovitro, cc.chem_conc_exp_route_nm as exproute, cc.taxon_nm_html as organism, cc.anatomyterms as anatomyterms, cc.anatomyterms as anatomytermssort, cc.action_type_cd as directevidence, cc.action_type_cd as directevidencesort, d.nm as diseasenm, d.acc_txt as diseaseacc, d.acc_db_cd as diseaseaccdbcd, d.id as diseaseid, tx.nm as taxonnm, tx.secondary_nm as taxoncomnm, tx.id as taxonid, tx.acc_txt as taxonacc, rg.refacc, rg.referencecount, count(*) over () fullrowcount from deduplicated_cc cc inner join term t on cc.chem_id = t.id inner join term tx on cc.taxon_id = tx.id left join term d on cc.disease_id = d.id inner join reference_groups rg on rg.chem_id is not distinct from cc.chem_id and rg.chem_conc is not distinct from cc.chem_conc and rg.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and rg.taxon_id is not distinct from cc.taxon_id and rg.disease_id is not distinct from cc.disease_id and rg.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and rg.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and rg.action_type_cd is not distinct from cc.action_type_cd and rg.anatomy_ids = cc.anatomy_ids where cc.rn = ? and t.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) order by diseasenm, organism limit ? offset ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Aug 12 10 1 20s3ms 20s3ms -
WITH anatomy AS ( SELECT chem_conc_id, array_agg(anatomy_id ORDER BY anatomy_id) AS anatomy_ids, string_agg(DISTINCT anatomy_nm_html || '^' || anatomy_acc_txt || '^' || position_seq || '^' || anatomy_acc_db_id || '^' || anatomy_nm, '|') AS anatomyTerms FROM chem_conc_anatomy cca GROUP BY chem_conc_id ), reference_groups AS ( SELECT cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, string_agg(DISTINCT r.acc_txt, '|') AS refAcc, COUNT(DISTINCT cc.reference_id) AS referenceCount FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id LEFT JOIN reference r ON r.id = cc.reference_id GROUP BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ), deduplicated_cc AS ( SELECT cc.*, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, a.anatomyTerms, ROW_NUMBER() OVER (PARTITION BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ORDER BY cc.id) AS rn FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id WHERE EXISTS ( SELECT 1 FROM chem_conc cc_ref LEFT JOIN anatomy a_ref ON a_ref.chem_conc_id = cc_ref.id WHERE cc_ref.chem_id IS NOT DISTINCT FROM cc.chem_id AND cc_ref.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND cc_ref.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND cc_ref.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND cc_ref.disease_id IS NOT DISTINCT FROM cc.disease_id AND cc_ref.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND cc_ref.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND cc_ref.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND COALESCE(a_ref.anatomy_ids, ARRAY[]::integer[]) = COALESCE(a.anatomy_ids, ARRAY[]::integer[]))) SELECT /* ChemConcentrationDao */ cc.chem_id AS chem_id, t.nm AS chem, t.nm_html AS chemNmHtml, t.acc_txt AS chemAcc, t.secondary_nm AS casRN, cc.chem_conc || ' ' || cc.chem_conc_uom_nm AS concentration, cc.ixn_qualifier_nm AS vivoVitro, cc.chem_conc_exp_route_nm AS expRoute, cc.taxon_nm_html AS organism, cc.anatomyTerms AS anatomyTerms, cc.anatomyTerms AS anatomyTermsSort, cc.action_type_cd AS directEvidence, cc.action_type_cd AS directEvidenceSort, d.nm AS diseasenm, d.acc_txt AS diseaseacc, d.acc_db_cd AS diseaseaccdbcd, d.id AS diseaseid, tx.nm AS taxonnm, tx.secondary_nm AS taxoncomnm, tx.id AS taxonid, tx.acc_txt AS taxonacc, rg.refAcc, rg.referenceCount, COUNT(*) OVER () fullRowCount FROM deduplicated_cc cc INNER JOIN term t ON cc.chem_id = t.id INNER JOIN term tx ON cc.taxon_id = tx.id LEFT JOIN term d ON cc.disease_id = d.id INNER JOIN reference_groups rg ON rg.chem_id IS NOT DISTINCT FROM cc.chem_id AND rg.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND rg.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND rg.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND rg.disease_id IS NOT DISTINCT FROM cc.disease_id AND rg.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND rg.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND rg.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND rg.anatomy_ids = cc.anatomy_ids WHERE cc.rn = 1 AND t.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1380020') ORDER BY diseasenm, organism LIMIT 50 OFFSET 300;
Date: 2026-08-12 10:54:56 Duration: 20s3ms Bind query: yes
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 1 24s842ms 24s842ms 24s842ms 24s842ms with anatomy as ( select chem_conc_id, array_agg(anatomy_id order by anatomy_id) as anatomy_ids, string_agg(distinct anatomy_nm_html || ? || anatomy_acc_txt || ? || position_seq || ? || anatomy_acc_db_id || ? || anatomy_nm, ?) as anatomyterms from chem_conc_anatomy cca group by chem_conc_id ), reference_groups as ( select cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, string_agg(distinct r.acc_txt, ?) as refacc, count(distinct cc.reference_id) as referencecount from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id left join reference r on r.id = cc.reference_id group by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) ), deduplicated_cc as ( select cc.*, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, a.anatomyterms, row_number() over (partition by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) order by cc.id) as rn from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id where exists ( select ? from chem_conc cc_ref left join anatomy a_ref on a_ref.chem_conc_id = cc_ref.id where cc_ref.chem_id is not distinct from cc.chem_id and cc_ref.chem_conc is not distinct from cc.chem_conc and cc_ref.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and cc_ref.taxon_id is not distinct from cc.taxon_id and cc_ref.disease_id is not distinct from cc.disease_id and cc_ref.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and cc_ref.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and cc_ref.action_type_cd is not distinct from cc.action_type_cd and coalesce(a_ref.anatomy_ids, array[]::integer[]) = coalesce(a.anatomy_ids, array[]::integer[]))) select cc.chem_id as chem_id, t.nm as chem, t.nm_html as chemnmhtml, t.acc_txt as chemacc, t.secondary_nm as casrn, cc.chem_conc || ? || cc.chem_conc_uom_nm as concentration, cc.ixn_qualifier_nm as vivovitro, cc.chem_conc_exp_route_nm as exproute, cc.taxon_nm_html as organism, cc.anatomyterms as anatomyterms, cc.anatomyterms as anatomytermssort, cc.action_type_cd as directevidence, cc.action_type_cd as directevidencesort, d.nm as diseasenm, d.acc_txt as diseaseacc, d.acc_db_cd as diseaseaccdbcd, d.id as diseaseid, tx.nm as taxonnm, tx.secondary_nm as taxoncomnm, tx.id as taxonid, tx.acc_txt as taxonacc, rg.refacc, rg.referencecount, count(*) over () fullrowcount from deduplicated_cc cc inner join term t on cc.chem_id = t.id inner join term tx on cc.taxon_id = tx.id left join term d on cc.disease_id = d.id inner join reference_groups rg on rg.chem_id is not distinct from cc.chem_id and rg.chem_conc is not distinct from cc.chem_conc and rg.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and rg.taxon_id is not distinct from cc.taxon_id and rg.disease_id is not distinct from cc.disease_id and rg.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and rg.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and rg.action_type_cd is not distinct from cc.action_type_cd and rg.anatomy_ids = cc.anatomy_ids where cc.rn = ? and t.id in ( select distinct dp.descendant_object_id # ? from dag_path dp # ? where dp.ancestor_object_id = ?) order by organism limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Aug 12 14 1 24s842ms 24s842ms [ User: qaeu - Total duration: 24s842ms - Times executed: 1 ]
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WITH anatomy AS ( SELECT chem_conc_id, array_agg(anatomy_id ORDER BY anatomy_id) AS anatomy_ids, string_agg(DISTINCT anatomy_nm_html || '^' || anatomy_acc_txt || '^' || position_seq || '^' || anatomy_acc_db_id || '^' || anatomy_nm, '|') AS anatomyTerms FROM chem_conc_anatomy cca GROUP BY chem_conc_id ), reference_groups AS ( SELECT cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, string_agg(DISTINCT r.acc_txt, '|') AS refAcc, COUNT(DISTINCT cc.reference_id) AS referenceCount FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id LEFT JOIN reference r ON r.id = cc.reference_id GROUP BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ), deduplicated_cc AS ( SELECT cc.*, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, a.anatomyTerms, ROW_NUMBER() OVER (PARTITION BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ORDER BY cc.id) AS rn FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id WHERE EXISTS ( SELECT 1 FROM chem_conc cc_ref LEFT JOIN anatomy a_ref ON a_ref.chem_conc_id = cc_ref.id WHERE cc_ref.chem_id IS NOT DISTINCT FROM cc.chem_id AND cc_ref.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND cc_ref.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND cc_ref.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND cc_ref.disease_id IS NOT DISTINCT FROM cc.disease_id AND cc_ref.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND cc_ref.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND cc_ref.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND COALESCE(a_ref.anatomy_ids, ARRAY[]::integer[]) = COALESCE(a.anatomy_ids, ARRAY[]::integer[]))) SELECT /* ChemConcentrationDao */ cc.chem_id AS chem_id, t.nm AS chem, t.nm_html AS chemNmHtml, t.acc_txt AS chemAcc, t.secondary_nm AS casRN, cc.chem_conc || ' ' || cc.chem_conc_uom_nm AS concentration, cc.ixn_qualifier_nm AS vivoVitro, cc.chem_conc_exp_route_nm AS expRoute, cc.taxon_nm_html AS organism, cc.anatomyTerms AS anatomyTerms, cc.anatomyTerms AS anatomyTermsSort, cc.action_type_cd AS directEvidence, cc.action_type_cd AS directEvidenceSort, d.nm AS diseasenm, d.acc_txt AS diseaseacc, d.acc_db_cd AS diseaseaccdbcd, d.id AS diseaseid, tx.nm AS taxonnm, tx.secondary_nm AS taxoncomnm, tx.id AS taxonid, tx.acc_txt AS taxonacc, rg.refAcc, rg.referenceCount, COUNT(*) OVER () fullRowCount FROM deduplicated_cc cc INNER JOIN term t ON cc.chem_id = t.id INNER JOIN term tx ON cc.taxon_id = tx.id LEFT JOIN term d ON cc.disease_id = d.id INNER JOIN reference_groups rg ON rg.chem_id IS NOT DISTINCT FROM cc.chem_id AND rg.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND rg.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND rg.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND rg.disease_id IS NOT DISTINCT FROM cc.disease_id AND rg.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND rg.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND rg.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND rg.anatomy_ids = cc.anatomy_ids WHERE cc.rn = 1 AND t.id in ( select distinct dp.descendant_object_id # 015 from dag_path dp # 015 WHERE dp.ancestor_object_id = '1539727') ORDER BY organism LIMIT 50;
Date: 2026-08-12 14:07:57 Duration: 24s842ms Database: ctddev51 User: qaeu Bind query: yes
2 1 20s107ms 20s107ms 20s107ms 20s107ms with anatomy as ( select chem_conc_id, array_agg(anatomy_id order by anatomy_id) as anatomy_ids, string_agg(distinct anatomy_nm_html || ? || anatomy_acc_txt || ? || position_seq || ? || anatomy_acc_db_id || ? || anatomy_nm, ?) as anatomyterms from chem_conc_anatomy cca group by chem_conc_id ), reference_groups as ( select cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, string_agg(distinct r.acc_txt, ?) as refacc, count(distinct cc.reference_id) as referencecount from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id left join reference r on r.id = cc.reference_id group by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) ), deduplicated_cc as ( select cc.*, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, a.anatomyterms, row_number() over (partition by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) order by cc.id) as rn from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id where exists ( select ? from chem_conc cc_ref left join anatomy a_ref on a_ref.chem_conc_id = cc_ref.id where cc_ref.chem_id is not distinct from cc.chem_id and cc_ref.chem_conc is not distinct from cc.chem_conc and cc_ref.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and cc_ref.taxon_id is not distinct from cc.taxon_id and cc_ref.disease_id is not distinct from cc.disease_id and cc_ref.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and cc_ref.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and cc_ref.action_type_cd is not distinct from cc.action_type_cd and coalesce(a_ref.anatomy_ids, array[]::integer[]) = coalesce(a.anatomy_ids, array[]::integer[]))) select cc.chem_id as chem_id, t.nm as chem, t.nm_html as chemnmhtml, t.acc_txt as chemacc, t.secondary_nm as casrn, cc.chem_conc || ? || cc.chem_conc_uom_nm as concentration, cc.ixn_qualifier_nm as vivovitro, cc.chem_conc_exp_route_nm as exproute, cc.taxon_nm_html as organism, cc.anatomyterms as anatomyterms, cc.anatomyterms as anatomytermssort, cc.action_type_cd as directevidence, cc.action_type_cd as directevidencesort, d.nm as diseasenm, d.acc_txt as diseaseacc, d.acc_db_cd as diseaseaccdbcd, d.id as diseaseid, tx.nm as taxonnm, tx.secondary_nm as taxoncomnm, tx.id as taxonid, tx.acc_txt as taxonacc, rg.refacc, rg.referencecount, count(*) over () fullrowcount from deduplicated_cc cc inner join term t on cc.chem_id = t.id inner join term tx on cc.taxon_id = tx.id left join term d on cc.disease_id = d.id inner join reference_groups rg on rg.chem_id is not distinct from cc.chem_id and rg.chem_conc is not distinct from cc.chem_conc and rg.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and rg.taxon_id is not distinct from cc.taxon_id and rg.disease_id is not distinct from cc.disease_id and rg.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and rg.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and rg.action_type_cd is not distinct from cc.action_type_cd and rg.anatomy_ids = cc.anatomy_ids where cc.rn = ? and t.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) order by organism limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Aug 12 10 1 20s107ms 20s107ms -
WITH anatomy AS ( SELECT chem_conc_id, array_agg(anatomy_id ORDER BY anatomy_id) AS anatomy_ids, string_agg(DISTINCT anatomy_nm_html || '^' || anatomy_acc_txt || '^' || position_seq || '^' || anatomy_acc_db_id || '^' || anatomy_nm, '|') AS anatomyTerms FROM chem_conc_anatomy cca GROUP BY chem_conc_id ), reference_groups AS ( SELECT cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, string_agg(DISTINCT r.acc_txt, '|') AS refAcc, COUNT(DISTINCT cc.reference_id) AS referenceCount FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id LEFT JOIN reference r ON r.id = cc.reference_id GROUP BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ), deduplicated_cc AS ( SELECT cc.*, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, a.anatomyTerms, ROW_NUMBER() OVER (PARTITION BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ORDER BY cc.id) AS rn FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id WHERE EXISTS ( SELECT 1 FROM chem_conc cc_ref LEFT JOIN anatomy a_ref ON a_ref.chem_conc_id = cc_ref.id WHERE cc_ref.chem_id IS NOT DISTINCT FROM cc.chem_id AND cc_ref.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND cc_ref.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND cc_ref.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND cc_ref.disease_id IS NOT DISTINCT FROM cc.disease_id AND cc_ref.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND cc_ref.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND cc_ref.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND COALESCE(a_ref.anatomy_ids, ARRAY[]::integer[]) = COALESCE(a.anatomy_ids, ARRAY[]::integer[]))) SELECT /* ChemConcentrationDao */ cc.chem_id AS chem_id, t.nm AS chem, t.nm_html AS chemNmHtml, t.acc_txt AS chemAcc, t.secondary_nm AS casRN, cc.chem_conc || ' ' || cc.chem_conc_uom_nm AS concentration, cc.ixn_qualifier_nm AS vivoVitro, cc.chem_conc_exp_route_nm AS expRoute, cc.taxon_nm_html AS organism, cc.anatomyTerms AS anatomyTerms, cc.anatomyTerms AS anatomyTermsSort, cc.action_type_cd AS directEvidence, cc.action_type_cd AS directEvidenceSort, d.nm AS diseasenm, d.acc_txt AS diseaseacc, d.acc_db_cd AS diseaseaccdbcd, d.id AS diseaseid, tx.nm AS taxonnm, tx.secondary_nm AS taxoncomnm, tx.id AS taxonid, tx.acc_txt AS taxonacc, rg.refAcc, rg.referenceCount, COUNT(*) OVER () fullRowCount FROM deduplicated_cc cc INNER JOIN term t ON cc.chem_id = t.id INNER JOIN term tx ON cc.taxon_id = tx.id LEFT JOIN term d ON cc.disease_id = d.id INNER JOIN reference_groups rg ON rg.chem_id IS NOT DISTINCT FROM cc.chem_id AND rg.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND rg.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND rg.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND rg.disease_id IS NOT DISTINCT FROM cc.disease_id AND rg.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND rg.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND rg.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND rg.anatomy_ids = cc.anatomy_ids WHERE cc.rn = 1 AND t.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1380020') ORDER BY organism LIMIT 50;
Date: 2026-08-12 10:53:07 Duration: 20s107ms Bind query: yes
3 1 20s103ms 20s103ms 20s103ms 20s103ms with anatomy as ( select chem_conc_id, array_agg(anatomy_id order by anatomy_id) as anatomy_ids, string_agg(distinct anatomy_nm_html || ? || anatomy_acc_txt || ? || position_seq || ? || anatomy_acc_db_id || ? || anatomy_nm, ?) as anatomyterms from chem_conc_anatomy cca group by chem_conc_id ), reference_groups as ( select cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, string_agg(distinct r.acc_txt, ?) as refacc, count(distinct cc.reference_id) as referencecount from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id left join reference r on r.id = cc.reference_id group by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) ), deduplicated_cc as ( select cc.*, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, a.anatomyterms, row_number() over (partition by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) order by cc.id) as rn from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id where exists ( select ? from chem_conc cc_ref left join anatomy a_ref on a_ref.chem_conc_id = cc_ref.id where cc_ref.chem_id is not distinct from cc.chem_id and cc_ref.chem_conc is not distinct from cc.chem_conc and cc_ref.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and cc_ref.taxon_id is not distinct from cc.taxon_id and cc_ref.disease_id is not distinct from cc.disease_id and cc_ref.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and cc_ref.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and cc_ref.action_type_cd is not distinct from cc.action_type_cd and coalesce(a_ref.anatomy_ids, array[]::integer[]) = coalesce(a.anatomy_ids, array[]::integer[]))) select cc.chem_id as chem_id, t.nm as chem, t.nm_html as chemnmhtml, t.acc_txt as chemacc, t.secondary_nm as casrn, cc.chem_conc || ? || cc.chem_conc_uom_nm as concentration, cc.ixn_qualifier_nm as vivovitro, cc.chem_conc_exp_route_nm as exproute, cc.taxon_nm_html as organism, cc.anatomyterms as anatomyterms, cc.anatomyterms as anatomytermssort, cc.action_type_cd as directevidence, cc.action_type_cd as directevidencesort, d.nm as diseasenm, d.acc_txt as diseaseacc, d.acc_db_cd as diseaseaccdbcd, d.id as diseaseid, tx.nm as taxonnm, tx.secondary_nm as taxoncomnm, tx.id as taxonid, tx.acc_txt as taxonacc, rg.refacc, rg.referencecount, count(*) over () fullrowcount from deduplicated_cc cc inner join term t on cc.chem_id = t.id inner join term tx on cc.taxon_id = tx.id left join term d on cc.disease_id = d.id inner join reference_groups rg on rg.chem_id is not distinct from cc.chem_id and rg.chem_conc is not distinct from cc.chem_conc and rg.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and rg.taxon_id is not distinct from cc.taxon_id and rg.disease_id is not distinct from cc.disease_id and rg.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and rg.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and rg.action_type_cd is not distinct from cc.action_type_cd and rg.anatomy_ids = cc.anatomy_ids where cc.rn = ? and t.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) order by organism desc limit ?;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Aug 12 10 1 20s103ms 20s103ms -
WITH anatomy AS ( SELECT chem_conc_id, array_agg(anatomy_id ORDER BY anatomy_id) AS anatomy_ids, string_agg(DISTINCT anatomy_nm_html || '^' || anatomy_acc_txt || '^' || position_seq || '^' || anatomy_acc_db_id || '^' || anatomy_nm, '|') AS anatomyTerms FROM chem_conc_anatomy cca GROUP BY chem_conc_id ), reference_groups AS ( SELECT cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, string_agg(DISTINCT r.acc_txt, '|') AS refAcc, COUNT(DISTINCT cc.reference_id) AS referenceCount FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id LEFT JOIN reference r ON r.id = cc.reference_id GROUP BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ), deduplicated_cc AS ( SELECT cc.*, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, a.anatomyTerms, ROW_NUMBER() OVER (PARTITION BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ORDER BY cc.id) AS rn FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id WHERE EXISTS ( SELECT 1 FROM chem_conc cc_ref LEFT JOIN anatomy a_ref ON a_ref.chem_conc_id = cc_ref.id WHERE cc_ref.chem_id IS NOT DISTINCT FROM cc.chem_id AND cc_ref.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND cc_ref.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND cc_ref.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND cc_ref.disease_id IS NOT DISTINCT FROM cc.disease_id AND cc_ref.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND cc_ref.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND cc_ref.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND COALESCE(a_ref.anatomy_ids, ARRAY[]::integer[]) = COALESCE(a.anatomy_ids, ARRAY[]::integer[]))) SELECT /* ChemConcentrationDao */ cc.chem_id AS chem_id, t.nm AS chem, t.nm_html AS chemNmHtml, t.acc_txt AS chemAcc, t.secondary_nm AS casRN, cc.chem_conc || ' ' || cc.chem_conc_uom_nm AS concentration, cc.ixn_qualifier_nm AS vivoVitro, cc.chem_conc_exp_route_nm AS expRoute, cc.taxon_nm_html AS organism, cc.anatomyTerms AS anatomyTerms, cc.anatomyTerms AS anatomyTermsSort, cc.action_type_cd AS directEvidence, cc.action_type_cd AS directEvidenceSort, d.nm AS diseasenm, d.acc_txt AS diseaseacc, d.acc_db_cd AS diseaseaccdbcd, d.id AS diseaseid, tx.nm AS taxonnm, tx.secondary_nm AS taxoncomnm, tx.id AS taxonid, tx.acc_txt AS taxonacc, rg.refAcc, rg.referenceCount, COUNT(*) OVER () fullRowCount FROM deduplicated_cc cc INNER JOIN term t ON cc.chem_id = t.id INNER JOIN term tx ON cc.taxon_id = tx.id LEFT JOIN term d ON cc.disease_id = d.id INNER JOIN reference_groups rg ON rg.chem_id IS NOT DISTINCT FROM cc.chem_id AND rg.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND rg.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND rg.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND rg.disease_id IS NOT DISTINCT FROM cc.disease_id AND rg.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND rg.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND rg.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND rg.anatomy_ids = cc.anatomy_ids WHERE cc.rn = 1 AND t.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1380020') ORDER BY organism DESC LIMIT 50;
Date: 2026-08-12 10:53:39 Duration: 20s103ms Bind query: yes
4 1 20s6ms 20s6ms 20s6ms 20s6ms with anatomy as ( select chem_conc_id, array_agg(anatomy_id order by anatomy_id) as anatomy_ids, string_agg(distinct anatomy_nm_html || ? || anatomy_acc_txt || ? || position_seq || ? || anatomy_acc_db_id || ? || anatomy_nm, ?) as anatomyterms from chem_conc_anatomy cca group by chem_conc_id ), reference_groups as ( select cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, string_agg(distinct r.acc_txt, ?) as refacc, count(distinct cc.reference_id) as referencecount from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id left join reference r on r.id = cc.reference_id group by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) ), deduplicated_cc as ( select cc.*, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, a.anatomyterms, row_number() over (partition by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) order by cc.id) as rn from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id where exists ( select ? from chem_conc cc_ref left join anatomy a_ref on a_ref.chem_conc_id = cc_ref.id where cc_ref.chem_id is not distinct from cc.chem_id and cc_ref.chem_conc is not distinct from cc.chem_conc and cc_ref.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and cc_ref.taxon_id is not distinct from cc.taxon_id and cc_ref.disease_id is not distinct from cc.disease_id and cc_ref.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and cc_ref.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and cc_ref.action_type_cd is not distinct from cc.action_type_cd and coalesce(a_ref.anatomy_ids, array[]::integer[]) = coalesce(a.anatomy_ids, array[]::integer[]))) select cc.chem_id as chem_id, t.nm as chem, t.nm_html as chemnmhtml, t.acc_txt as chemacc, t.secondary_nm as casrn, cc.chem_conc || ? || cc.chem_conc_uom_nm as concentration, cc.ixn_qualifier_nm as vivovitro, cc.chem_conc_exp_route_nm as exproute, cc.taxon_nm_html as organism, cc.anatomyterms as anatomyterms, cc.anatomyterms as anatomytermssort, cc.action_type_cd as directevidence, cc.action_type_cd as directevidencesort, d.nm as diseasenm, d.acc_txt as diseaseacc, d.acc_db_cd as diseaseaccdbcd, d.id as diseaseid, tx.nm as taxonnm, tx.secondary_nm as taxoncomnm, tx.id as taxonid, tx.acc_txt as taxonacc, rg.refacc, rg.referencecount, count(*) over () fullrowcount from deduplicated_cc cc inner join term t on cc.chem_id = t.id inner join term tx on cc.taxon_id = tx.id left join term d on cc.disease_id = d.id inner join reference_groups rg on rg.chem_id is not distinct from cc.chem_id and rg.chem_conc is not distinct from cc.chem_conc and rg.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and rg.taxon_id is not distinct from cc.taxon_id and rg.disease_id is not distinct from cc.disease_id and rg.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and rg.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and rg.action_type_cd is not distinct from cc.action_type_cd and rg.anatomy_ids = cc.anatomy_ids where cc.rn = ? and t.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) order by diseasenm, organism limit ?;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Aug 12 10 1 20s6ms 20s6ms -
WITH anatomy AS ( SELECT chem_conc_id, array_agg(anatomy_id ORDER BY anatomy_id) AS anatomy_ids, string_agg(DISTINCT anatomy_nm_html || '^' || anatomy_acc_txt || '^' || position_seq || '^' || anatomy_acc_db_id || '^' || anatomy_nm, '|') AS anatomyTerms FROM chem_conc_anatomy cca GROUP BY chem_conc_id ), reference_groups AS ( SELECT cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, string_agg(DISTINCT r.acc_txt, '|') AS refAcc, COUNT(DISTINCT cc.reference_id) AS referenceCount FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id LEFT JOIN reference r ON r.id = cc.reference_id GROUP BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ), deduplicated_cc AS ( SELECT cc.*, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, a.anatomyTerms, ROW_NUMBER() OVER (PARTITION BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ORDER BY cc.id) AS rn FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id WHERE EXISTS ( SELECT 1 FROM chem_conc cc_ref LEFT JOIN anatomy a_ref ON a_ref.chem_conc_id = cc_ref.id WHERE cc_ref.chem_id IS NOT DISTINCT FROM cc.chem_id AND cc_ref.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND cc_ref.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND cc_ref.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND cc_ref.disease_id IS NOT DISTINCT FROM cc.disease_id AND cc_ref.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND cc_ref.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND cc_ref.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND COALESCE(a_ref.anatomy_ids, ARRAY[]::integer[]) = COALESCE(a.anatomy_ids, ARRAY[]::integer[]))) SELECT /* ChemConcentrationDao */ cc.chem_id AS chem_id, t.nm AS chem, t.nm_html AS chemNmHtml, t.acc_txt AS chemAcc, t.secondary_nm AS casRN, cc.chem_conc || ' ' || cc.chem_conc_uom_nm AS concentration, cc.ixn_qualifier_nm AS vivoVitro, cc.chem_conc_exp_route_nm AS expRoute, cc.taxon_nm_html AS organism, cc.anatomyTerms AS anatomyTerms, cc.anatomyTerms AS anatomyTermsSort, cc.action_type_cd AS directEvidence, cc.action_type_cd AS directEvidenceSort, d.nm AS diseasenm, d.acc_txt AS diseaseacc, d.acc_db_cd AS diseaseaccdbcd, d.id AS diseaseid, tx.nm AS taxonnm, tx.secondary_nm AS taxoncomnm, tx.id AS taxonid, tx.acc_txt AS taxonacc, rg.refAcc, rg.referenceCount, COUNT(*) OVER () fullRowCount FROM deduplicated_cc cc INNER JOIN term t ON cc.chem_id = t.id INNER JOIN term tx ON cc.taxon_id = tx.id LEFT JOIN term d ON cc.disease_id = d.id INNER JOIN reference_groups rg ON rg.chem_id IS NOT DISTINCT FROM cc.chem_id AND rg.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND rg.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND rg.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND rg.disease_id IS NOT DISTINCT FROM cc.disease_id AND rg.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND rg.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND rg.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND rg.anatomy_ids = cc.anatomy_ids WHERE cc.rn = 1 AND t.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1380020') ORDER BY diseasenm, organism LIMIT 50;
Date: 2026-08-12 10:54:12 Duration: 20s6ms Bind query: yes
5 1 20s3ms 20s3ms 20s3ms 20s3ms with anatomy as ( select chem_conc_id, array_agg(anatomy_id order by anatomy_id) as anatomy_ids, string_agg(distinct anatomy_nm_html || ? || anatomy_acc_txt || ? || position_seq || ? || anatomy_acc_db_id || ? || anatomy_nm, ?) as anatomyterms from chem_conc_anatomy cca group by chem_conc_id ), reference_groups as ( select cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, string_agg(distinct r.acc_txt, ?) as refacc, count(distinct cc.reference_id) as referencecount from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id left join reference r on r.id = cc.reference_id group by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) ), deduplicated_cc as ( select cc.*, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, a.anatomyterms, row_number() over (partition by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) order by cc.id) as rn from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id where exists ( select ? from chem_conc cc_ref left join anatomy a_ref on a_ref.chem_conc_id = cc_ref.id where cc_ref.chem_id is not distinct from cc.chem_id and cc_ref.chem_conc is not distinct from cc.chem_conc and cc_ref.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and cc_ref.taxon_id is not distinct from cc.taxon_id and cc_ref.disease_id is not distinct from cc.disease_id and cc_ref.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and cc_ref.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and cc_ref.action_type_cd is not distinct from cc.action_type_cd and coalesce(a_ref.anatomy_ids, array[]::integer[]) = coalesce(a.anatomy_ids, array[]::integer[]))) select cc.chem_id as chem_id, t.nm as chem, t.nm_html as chemnmhtml, t.acc_txt as chemacc, t.secondary_nm as casrn, cc.chem_conc || ? || cc.chem_conc_uom_nm as concentration, cc.ixn_qualifier_nm as vivovitro, cc.chem_conc_exp_route_nm as exproute, cc.taxon_nm_html as organism, cc.anatomyterms as anatomyterms, cc.anatomyterms as anatomytermssort, cc.action_type_cd as directevidence, cc.action_type_cd as directevidencesort, d.nm as diseasenm, d.acc_txt as diseaseacc, d.acc_db_cd as diseaseaccdbcd, d.id as diseaseid, tx.nm as taxonnm, tx.secondary_nm as taxoncomnm, tx.id as taxonid, tx.acc_txt as taxonacc, rg.refacc, rg.referencecount, count(*) over () fullrowcount from deduplicated_cc cc inner join term t on cc.chem_id = t.id inner join term tx on cc.taxon_id = tx.id left join term d on cc.disease_id = d.id inner join reference_groups rg on rg.chem_id is not distinct from cc.chem_id and rg.chem_conc is not distinct from cc.chem_conc and rg.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and rg.taxon_id is not distinct from cc.taxon_id and rg.disease_id is not distinct from cc.disease_id and rg.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and rg.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and rg.action_type_cd is not distinct from cc.action_type_cd and rg.anatomy_ids = cc.anatomy_ids where cc.rn = ? and t.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) order by diseasenm, organism limit ? offset ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Aug 12 10 1 20s3ms 20s3ms -
WITH anatomy AS ( SELECT chem_conc_id, array_agg(anatomy_id ORDER BY anatomy_id) AS anatomy_ids, string_agg(DISTINCT anatomy_nm_html || '^' || anatomy_acc_txt || '^' || position_seq || '^' || anatomy_acc_db_id || '^' || anatomy_nm, '|') AS anatomyTerms FROM chem_conc_anatomy cca GROUP BY chem_conc_id ), reference_groups AS ( SELECT cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, string_agg(DISTINCT r.acc_txt, '|') AS refAcc, COUNT(DISTINCT cc.reference_id) AS referenceCount FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id LEFT JOIN reference r ON r.id = cc.reference_id GROUP BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ), deduplicated_cc AS ( SELECT cc.*, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, a.anatomyTerms, ROW_NUMBER() OVER (PARTITION BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ORDER BY cc.id) AS rn FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id WHERE EXISTS ( SELECT 1 FROM chem_conc cc_ref LEFT JOIN anatomy a_ref ON a_ref.chem_conc_id = cc_ref.id WHERE cc_ref.chem_id IS NOT DISTINCT FROM cc.chem_id AND cc_ref.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND cc_ref.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND cc_ref.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND cc_ref.disease_id IS NOT DISTINCT FROM cc.disease_id AND cc_ref.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND cc_ref.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND cc_ref.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND COALESCE(a_ref.anatomy_ids, ARRAY[]::integer[]) = COALESCE(a.anatomy_ids, ARRAY[]::integer[]))) SELECT /* ChemConcentrationDao */ cc.chem_id AS chem_id, t.nm AS chem, t.nm_html AS chemNmHtml, t.acc_txt AS chemAcc, t.secondary_nm AS casRN, cc.chem_conc || ' ' || cc.chem_conc_uom_nm AS concentration, cc.ixn_qualifier_nm AS vivoVitro, cc.chem_conc_exp_route_nm AS expRoute, cc.taxon_nm_html AS organism, cc.anatomyTerms AS anatomyTerms, cc.anatomyTerms AS anatomyTermsSort, cc.action_type_cd AS directEvidence, cc.action_type_cd AS directEvidenceSort, d.nm AS diseasenm, d.acc_txt AS diseaseacc, d.acc_db_cd AS diseaseaccdbcd, d.id AS diseaseid, tx.nm AS taxonnm, tx.secondary_nm AS taxoncomnm, tx.id AS taxonid, tx.acc_txt AS taxonacc, rg.refAcc, rg.referenceCount, COUNT(*) OVER () fullRowCount FROM deduplicated_cc cc INNER JOIN term t ON cc.chem_id = t.id INNER JOIN term tx ON cc.taxon_id = tx.id LEFT JOIN term d ON cc.disease_id = d.id INNER JOIN reference_groups rg ON rg.chem_id IS NOT DISTINCT FROM cc.chem_id AND rg.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND rg.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND rg.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND rg.disease_id IS NOT DISTINCT FROM cc.disease_id AND rg.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND rg.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND rg.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND rg.anatomy_ids = cc.anatomy_ids WHERE cc.rn = 1 AND t.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1380020') ORDER BY diseasenm, organism LIMIT 50 OFFSET 300;
Date: 2026-08-12 10:54:56 Duration: 20s3ms Bind query: yes
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 24s842ms 24s842ms 24s842ms 1 24s842ms with anatomy as ( select chem_conc_id, array_agg(anatomy_id order by anatomy_id) as anatomy_ids, string_agg(distinct anatomy_nm_html || ? || anatomy_acc_txt || ? || position_seq || ? || anatomy_acc_db_id || ? || anatomy_nm, ?) as anatomyterms from chem_conc_anatomy cca group by chem_conc_id ), reference_groups as ( select cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, string_agg(distinct r.acc_txt, ?) as refacc, count(distinct cc.reference_id) as referencecount from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id left join reference r on r.id = cc.reference_id group by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) ), deduplicated_cc as ( select cc.*, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, a.anatomyterms, row_number() over (partition by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) order by cc.id) as rn from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id where exists ( select ? from chem_conc cc_ref left join anatomy a_ref on a_ref.chem_conc_id = cc_ref.id where cc_ref.chem_id is not distinct from cc.chem_id and cc_ref.chem_conc is not distinct from cc.chem_conc and cc_ref.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and cc_ref.taxon_id is not distinct from cc.taxon_id and cc_ref.disease_id is not distinct from cc.disease_id and cc_ref.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and cc_ref.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and cc_ref.action_type_cd is not distinct from cc.action_type_cd and coalesce(a_ref.anatomy_ids, array[]::integer[]) = coalesce(a.anatomy_ids, array[]::integer[]))) select cc.chem_id as chem_id, t.nm as chem, t.nm_html as chemnmhtml, t.acc_txt as chemacc, t.secondary_nm as casrn, cc.chem_conc || ? || cc.chem_conc_uom_nm as concentration, cc.ixn_qualifier_nm as vivovitro, cc.chem_conc_exp_route_nm as exproute, cc.taxon_nm_html as organism, cc.anatomyterms as anatomyterms, cc.anatomyterms as anatomytermssort, cc.action_type_cd as directevidence, cc.action_type_cd as directevidencesort, d.nm as diseasenm, d.acc_txt as diseaseacc, d.acc_db_cd as diseaseaccdbcd, d.id as diseaseid, tx.nm as taxonnm, tx.secondary_nm as taxoncomnm, tx.id as taxonid, tx.acc_txt as taxonacc, rg.refacc, rg.referencecount, count(*) over () fullrowcount from deduplicated_cc cc inner join term t on cc.chem_id = t.id inner join term tx on cc.taxon_id = tx.id left join term d on cc.disease_id = d.id inner join reference_groups rg on rg.chem_id is not distinct from cc.chem_id and rg.chem_conc is not distinct from cc.chem_conc and rg.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and rg.taxon_id is not distinct from cc.taxon_id and rg.disease_id is not distinct from cc.disease_id and rg.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and rg.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and rg.action_type_cd is not distinct from cc.action_type_cd and rg.anatomy_ids = cc.anatomy_ids where cc.rn = ? and t.id in ( select distinct dp.descendant_object_id # ? from dag_path dp # ? where dp.ancestor_object_id = ?) order by organism limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Aug 12 14 1 24s842ms 24s842ms [ User: qaeu - Total duration: 24s842ms - Times executed: 1 ]
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WITH anatomy AS ( SELECT chem_conc_id, array_agg(anatomy_id ORDER BY anatomy_id) AS anatomy_ids, string_agg(DISTINCT anatomy_nm_html || '^' || anatomy_acc_txt || '^' || position_seq || '^' || anatomy_acc_db_id || '^' || anatomy_nm, '|') AS anatomyTerms FROM chem_conc_anatomy cca GROUP BY chem_conc_id ), reference_groups AS ( SELECT cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, string_agg(DISTINCT r.acc_txt, '|') AS refAcc, COUNT(DISTINCT cc.reference_id) AS referenceCount FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id LEFT JOIN reference r ON r.id = cc.reference_id GROUP BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ), deduplicated_cc AS ( SELECT cc.*, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, a.anatomyTerms, ROW_NUMBER() OVER (PARTITION BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ORDER BY cc.id) AS rn FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id WHERE EXISTS ( SELECT 1 FROM chem_conc cc_ref LEFT JOIN anatomy a_ref ON a_ref.chem_conc_id = cc_ref.id WHERE cc_ref.chem_id IS NOT DISTINCT FROM cc.chem_id AND cc_ref.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND cc_ref.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND cc_ref.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND cc_ref.disease_id IS NOT DISTINCT FROM cc.disease_id AND cc_ref.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND cc_ref.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND cc_ref.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND COALESCE(a_ref.anatomy_ids, ARRAY[]::integer[]) = COALESCE(a.anatomy_ids, ARRAY[]::integer[]))) SELECT /* ChemConcentrationDao */ cc.chem_id AS chem_id, t.nm AS chem, t.nm_html AS chemNmHtml, t.acc_txt AS chemAcc, t.secondary_nm AS casRN, cc.chem_conc || ' ' || cc.chem_conc_uom_nm AS concentration, cc.ixn_qualifier_nm AS vivoVitro, cc.chem_conc_exp_route_nm AS expRoute, cc.taxon_nm_html AS organism, cc.anatomyTerms AS anatomyTerms, cc.anatomyTerms AS anatomyTermsSort, cc.action_type_cd AS directEvidence, cc.action_type_cd AS directEvidenceSort, d.nm AS diseasenm, d.acc_txt AS diseaseacc, d.acc_db_cd AS diseaseaccdbcd, d.id AS diseaseid, tx.nm AS taxonnm, tx.secondary_nm AS taxoncomnm, tx.id AS taxonid, tx.acc_txt AS taxonacc, rg.refAcc, rg.referenceCount, COUNT(*) OVER () fullRowCount FROM deduplicated_cc cc INNER JOIN term t ON cc.chem_id = t.id INNER JOIN term tx ON cc.taxon_id = tx.id LEFT JOIN term d ON cc.disease_id = d.id INNER JOIN reference_groups rg ON rg.chem_id IS NOT DISTINCT FROM cc.chem_id AND rg.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND rg.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND rg.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND rg.disease_id IS NOT DISTINCT FROM cc.disease_id AND rg.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND rg.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND rg.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND rg.anatomy_ids = cc.anatomy_ids WHERE cc.rn = 1 AND t.id in ( select distinct dp.descendant_object_id # 015 from dag_path dp # 015 WHERE dp.ancestor_object_id = '1539727') ORDER BY organism LIMIT 50;
Date: 2026-08-12 14:07:57 Duration: 24s842ms Database: ctddev51 User: qaeu Bind query: yes
2 20s107ms 20s107ms 20s107ms 1 20s107ms with anatomy as ( select chem_conc_id, array_agg(anatomy_id order by anatomy_id) as anatomy_ids, string_agg(distinct anatomy_nm_html || ? || anatomy_acc_txt || ? || position_seq || ? || anatomy_acc_db_id || ? || anatomy_nm, ?) as anatomyterms from chem_conc_anatomy cca group by chem_conc_id ), reference_groups as ( select cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, string_agg(distinct r.acc_txt, ?) as refacc, count(distinct cc.reference_id) as referencecount from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id left join reference r on r.id = cc.reference_id group by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) ), deduplicated_cc as ( select cc.*, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, a.anatomyterms, row_number() over (partition by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) order by cc.id) as rn from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id where exists ( select ? from chem_conc cc_ref left join anatomy a_ref on a_ref.chem_conc_id = cc_ref.id where cc_ref.chem_id is not distinct from cc.chem_id and cc_ref.chem_conc is not distinct from cc.chem_conc and cc_ref.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and cc_ref.taxon_id is not distinct from cc.taxon_id and cc_ref.disease_id is not distinct from cc.disease_id and cc_ref.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and cc_ref.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and cc_ref.action_type_cd is not distinct from cc.action_type_cd and coalesce(a_ref.anatomy_ids, array[]::integer[]) = coalesce(a.anatomy_ids, array[]::integer[]))) select cc.chem_id as chem_id, t.nm as chem, t.nm_html as chemnmhtml, t.acc_txt as chemacc, t.secondary_nm as casrn, cc.chem_conc || ? || cc.chem_conc_uom_nm as concentration, cc.ixn_qualifier_nm as vivovitro, cc.chem_conc_exp_route_nm as exproute, cc.taxon_nm_html as organism, cc.anatomyterms as anatomyterms, cc.anatomyterms as anatomytermssort, cc.action_type_cd as directevidence, cc.action_type_cd as directevidencesort, d.nm as diseasenm, d.acc_txt as diseaseacc, d.acc_db_cd as diseaseaccdbcd, d.id as diseaseid, tx.nm as taxonnm, tx.secondary_nm as taxoncomnm, tx.id as taxonid, tx.acc_txt as taxonacc, rg.refacc, rg.referencecount, count(*) over () fullrowcount from deduplicated_cc cc inner join term t on cc.chem_id = t.id inner join term tx on cc.taxon_id = tx.id left join term d on cc.disease_id = d.id inner join reference_groups rg on rg.chem_id is not distinct from cc.chem_id and rg.chem_conc is not distinct from cc.chem_conc and rg.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and rg.taxon_id is not distinct from cc.taxon_id and rg.disease_id is not distinct from cc.disease_id and rg.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and rg.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and rg.action_type_cd is not distinct from cc.action_type_cd and rg.anatomy_ids = cc.anatomy_ids where cc.rn = ? and t.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) order by organism limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Aug 12 10 1 20s107ms 20s107ms -
WITH anatomy AS ( SELECT chem_conc_id, array_agg(anatomy_id ORDER BY anatomy_id) AS anatomy_ids, string_agg(DISTINCT anatomy_nm_html || '^' || anatomy_acc_txt || '^' || position_seq || '^' || anatomy_acc_db_id || '^' || anatomy_nm, '|') AS anatomyTerms FROM chem_conc_anatomy cca GROUP BY chem_conc_id ), reference_groups AS ( SELECT cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, string_agg(DISTINCT r.acc_txt, '|') AS refAcc, COUNT(DISTINCT cc.reference_id) AS referenceCount FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id LEFT JOIN reference r ON r.id = cc.reference_id GROUP BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ), deduplicated_cc AS ( SELECT cc.*, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, a.anatomyTerms, ROW_NUMBER() OVER (PARTITION BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ORDER BY cc.id) AS rn FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id WHERE EXISTS ( SELECT 1 FROM chem_conc cc_ref LEFT JOIN anatomy a_ref ON a_ref.chem_conc_id = cc_ref.id WHERE cc_ref.chem_id IS NOT DISTINCT FROM cc.chem_id AND cc_ref.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND cc_ref.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND cc_ref.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND cc_ref.disease_id IS NOT DISTINCT FROM cc.disease_id AND cc_ref.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND cc_ref.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND cc_ref.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND COALESCE(a_ref.anatomy_ids, ARRAY[]::integer[]) = COALESCE(a.anatomy_ids, ARRAY[]::integer[]))) SELECT /* ChemConcentrationDao */ cc.chem_id AS chem_id, t.nm AS chem, t.nm_html AS chemNmHtml, t.acc_txt AS chemAcc, t.secondary_nm AS casRN, cc.chem_conc || ' ' || cc.chem_conc_uom_nm AS concentration, cc.ixn_qualifier_nm AS vivoVitro, cc.chem_conc_exp_route_nm AS expRoute, cc.taxon_nm_html AS organism, cc.anatomyTerms AS anatomyTerms, cc.anatomyTerms AS anatomyTermsSort, cc.action_type_cd AS directEvidence, cc.action_type_cd AS directEvidenceSort, d.nm AS diseasenm, d.acc_txt AS diseaseacc, d.acc_db_cd AS diseaseaccdbcd, d.id AS diseaseid, tx.nm AS taxonnm, tx.secondary_nm AS taxoncomnm, tx.id AS taxonid, tx.acc_txt AS taxonacc, rg.refAcc, rg.referenceCount, COUNT(*) OVER () fullRowCount FROM deduplicated_cc cc INNER JOIN term t ON cc.chem_id = t.id INNER JOIN term tx ON cc.taxon_id = tx.id LEFT JOIN term d ON cc.disease_id = d.id INNER JOIN reference_groups rg ON rg.chem_id IS NOT DISTINCT FROM cc.chem_id AND rg.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND rg.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND rg.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND rg.disease_id IS NOT DISTINCT FROM cc.disease_id AND rg.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND rg.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND rg.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND rg.anatomy_ids = cc.anatomy_ids WHERE cc.rn = 1 AND t.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1380020') ORDER BY organism LIMIT 50;
Date: 2026-08-12 10:53:07 Duration: 20s107ms Bind query: yes
3 20s103ms 20s103ms 20s103ms 1 20s103ms with anatomy as ( select chem_conc_id, array_agg(anatomy_id order by anatomy_id) as anatomy_ids, string_agg(distinct anatomy_nm_html || ? || anatomy_acc_txt || ? || position_seq || ? || anatomy_acc_db_id || ? || anatomy_nm, ?) as anatomyterms from chem_conc_anatomy cca group by chem_conc_id ), reference_groups as ( select cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, string_agg(distinct r.acc_txt, ?) as refacc, count(distinct cc.reference_id) as referencecount from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id left join reference r on r.id = cc.reference_id group by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) ), deduplicated_cc as ( select cc.*, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, a.anatomyterms, row_number() over (partition by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) order by cc.id) as rn from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id where exists ( select ? from chem_conc cc_ref left join anatomy a_ref on a_ref.chem_conc_id = cc_ref.id where cc_ref.chem_id is not distinct from cc.chem_id and cc_ref.chem_conc is not distinct from cc.chem_conc and cc_ref.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and cc_ref.taxon_id is not distinct from cc.taxon_id and cc_ref.disease_id is not distinct from cc.disease_id and cc_ref.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and cc_ref.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and cc_ref.action_type_cd is not distinct from cc.action_type_cd and coalesce(a_ref.anatomy_ids, array[]::integer[]) = coalesce(a.anatomy_ids, array[]::integer[]))) select cc.chem_id as chem_id, t.nm as chem, t.nm_html as chemnmhtml, t.acc_txt as chemacc, t.secondary_nm as casrn, cc.chem_conc || ? || cc.chem_conc_uom_nm as concentration, cc.ixn_qualifier_nm as vivovitro, cc.chem_conc_exp_route_nm as exproute, cc.taxon_nm_html as organism, cc.anatomyterms as anatomyterms, cc.anatomyterms as anatomytermssort, cc.action_type_cd as directevidence, cc.action_type_cd as directevidencesort, d.nm as diseasenm, d.acc_txt as diseaseacc, d.acc_db_cd as diseaseaccdbcd, d.id as diseaseid, tx.nm as taxonnm, tx.secondary_nm as taxoncomnm, tx.id as taxonid, tx.acc_txt as taxonacc, rg.refacc, rg.referencecount, count(*) over () fullrowcount from deduplicated_cc cc inner join term t on cc.chem_id = t.id inner join term tx on cc.taxon_id = tx.id left join term d on cc.disease_id = d.id inner join reference_groups rg on rg.chem_id is not distinct from cc.chem_id and rg.chem_conc is not distinct from cc.chem_conc and rg.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and rg.taxon_id is not distinct from cc.taxon_id and rg.disease_id is not distinct from cc.disease_id and rg.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and rg.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and rg.action_type_cd is not distinct from cc.action_type_cd and rg.anatomy_ids = cc.anatomy_ids where cc.rn = ? and t.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) order by organism desc limit ?;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Aug 12 10 1 20s103ms 20s103ms -
WITH anatomy AS ( SELECT chem_conc_id, array_agg(anatomy_id ORDER BY anatomy_id) AS anatomy_ids, string_agg(DISTINCT anatomy_nm_html || '^' || anatomy_acc_txt || '^' || position_seq || '^' || anatomy_acc_db_id || '^' || anatomy_nm, '|') AS anatomyTerms FROM chem_conc_anatomy cca GROUP BY chem_conc_id ), reference_groups AS ( SELECT cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, string_agg(DISTINCT r.acc_txt, '|') AS refAcc, COUNT(DISTINCT cc.reference_id) AS referenceCount FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id LEFT JOIN reference r ON r.id = cc.reference_id GROUP BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ), deduplicated_cc AS ( SELECT cc.*, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, a.anatomyTerms, ROW_NUMBER() OVER (PARTITION BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ORDER BY cc.id) AS rn FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id WHERE EXISTS ( SELECT 1 FROM chem_conc cc_ref LEFT JOIN anatomy a_ref ON a_ref.chem_conc_id = cc_ref.id WHERE cc_ref.chem_id IS NOT DISTINCT FROM cc.chem_id AND cc_ref.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND cc_ref.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND cc_ref.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND cc_ref.disease_id IS NOT DISTINCT FROM cc.disease_id AND cc_ref.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND cc_ref.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND cc_ref.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND COALESCE(a_ref.anatomy_ids, ARRAY[]::integer[]) = COALESCE(a.anatomy_ids, ARRAY[]::integer[]))) SELECT /* ChemConcentrationDao */ cc.chem_id AS chem_id, t.nm AS chem, t.nm_html AS chemNmHtml, t.acc_txt AS chemAcc, t.secondary_nm AS casRN, cc.chem_conc || ' ' || cc.chem_conc_uom_nm AS concentration, cc.ixn_qualifier_nm AS vivoVitro, cc.chem_conc_exp_route_nm AS expRoute, cc.taxon_nm_html AS organism, cc.anatomyTerms AS anatomyTerms, cc.anatomyTerms AS anatomyTermsSort, cc.action_type_cd AS directEvidence, cc.action_type_cd AS directEvidenceSort, d.nm AS diseasenm, d.acc_txt AS diseaseacc, d.acc_db_cd AS diseaseaccdbcd, d.id AS diseaseid, tx.nm AS taxonnm, tx.secondary_nm AS taxoncomnm, tx.id AS taxonid, tx.acc_txt AS taxonacc, rg.refAcc, rg.referenceCount, COUNT(*) OVER () fullRowCount FROM deduplicated_cc cc INNER JOIN term t ON cc.chem_id = t.id INNER JOIN term tx ON cc.taxon_id = tx.id LEFT JOIN term d ON cc.disease_id = d.id INNER JOIN reference_groups rg ON rg.chem_id IS NOT DISTINCT FROM cc.chem_id AND rg.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND rg.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND rg.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND rg.disease_id IS NOT DISTINCT FROM cc.disease_id AND rg.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND rg.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND rg.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND rg.anatomy_ids = cc.anatomy_ids WHERE cc.rn = 1 AND t.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1380020') ORDER BY organism DESC LIMIT 50;
Date: 2026-08-12 10:53:39 Duration: 20s103ms Bind query: yes
4 20s6ms 20s6ms 20s6ms 1 20s6ms with anatomy as ( select chem_conc_id, array_agg(anatomy_id order by anatomy_id) as anatomy_ids, string_agg(distinct anatomy_nm_html || ? || anatomy_acc_txt || ? || position_seq || ? || anatomy_acc_db_id || ? || anatomy_nm, ?) as anatomyterms from chem_conc_anatomy cca group by chem_conc_id ), reference_groups as ( select cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, string_agg(distinct r.acc_txt, ?) as refacc, count(distinct cc.reference_id) as referencecount from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id left join reference r on r.id = cc.reference_id group by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) ), deduplicated_cc as ( select cc.*, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, a.anatomyterms, row_number() over (partition by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) order by cc.id) as rn from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id where exists ( select ? from chem_conc cc_ref left join anatomy a_ref on a_ref.chem_conc_id = cc_ref.id where cc_ref.chem_id is not distinct from cc.chem_id and cc_ref.chem_conc is not distinct from cc.chem_conc and cc_ref.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and cc_ref.taxon_id is not distinct from cc.taxon_id and cc_ref.disease_id is not distinct from cc.disease_id and cc_ref.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and cc_ref.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and cc_ref.action_type_cd is not distinct from cc.action_type_cd and coalesce(a_ref.anatomy_ids, array[]::integer[]) = coalesce(a.anatomy_ids, array[]::integer[]))) select cc.chem_id as chem_id, t.nm as chem, t.nm_html as chemnmhtml, t.acc_txt as chemacc, t.secondary_nm as casrn, cc.chem_conc || ? || cc.chem_conc_uom_nm as concentration, cc.ixn_qualifier_nm as vivovitro, cc.chem_conc_exp_route_nm as exproute, cc.taxon_nm_html as organism, cc.anatomyterms as anatomyterms, cc.anatomyterms as anatomytermssort, cc.action_type_cd as directevidence, cc.action_type_cd as directevidencesort, d.nm as diseasenm, d.acc_txt as diseaseacc, d.acc_db_cd as diseaseaccdbcd, d.id as diseaseid, tx.nm as taxonnm, tx.secondary_nm as taxoncomnm, tx.id as taxonid, tx.acc_txt as taxonacc, rg.refacc, rg.referencecount, count(*) over () fullrowcount from deduplicated_cc cc inner join term t on cc.chem_id = t.id inner join term tx on cc.taxon_id = tx.id left join term d on cc.disease_id = d.id inner join reference_groups rg on rg.chem_id is not distinct from cc.chem_id and rg.chem_conc is not distinct from cc.chem_conc and rg.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and rg.taxon_id is not distinct from cc.taxon_id and rg.disease_id is not distinct from cc.disease_id and rg.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and rg.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and rg.action_type_cd is not distinct from cc.action_type_cd and rg.anatomy_ids = cc.anatomy_ids where cc.rn = ? and t.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) order by diseasenm, organism limit ?;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Aug 12 10 1 20s6ms 20s6ms -
WITH anatomy AS ( SELECT chem_conc_id, array_agg(anatomy_id ORDER BY anatomy_id) AS anatomy_ids, string_agg(DISTINCT anatomy_nm_html || '^' || anatomy_acc_txt || '^' || position_seq || '^' || anatomy_acc_db_id || '^' || anatomy_nm, '|') AS anatomyTerms FROM chem_conc_anatomy cca GROUP BY chem_conc_id ), reference_groups AS ( SELECT cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, string_agg(DISTINCT r.acc_txt, '|') AS refAcc, COUNT(DISTINCT cc.reference_id) AS referenceCount FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id LEFT JOIN reference r ON r.id = cc.reference_id GROUP BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ), deduplicated_cc AS ( SELECT cc.*, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, a.anatomyTerms, ROW_NUMBER() OVER (PARTITION BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ORDER BY cc.id) AS rn FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id WHERE EXISTS ( SELECT 1 FROM chem_conc cc_ref LEFT JOIN anatomy a_ref ON a_ref.chem_conc_id = cc_ref.id WHERE cc_ref.chem_id IS NOT DISTINCT FROM cc.chem_id AND cc_ref.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND cc_ref.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND cc_ref.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND cc_ref.disease_id IS NOT DISTINCT FROM cc.disease_id AND cc_ref.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND cc_ref.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND cc_ref.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND COALESCE(a_ref.anatomy_ids, ARRAY[]::integer[]) = COALESCE(a.anatomy_ids, ARRAY[]::integer[]))) SELECT /* ChemConcentrationDao */ cc.chem_id AS chem_id, t.nm AS chem, t.nm_html AS chemNmHtml, t.acc_txt AS chemAcc, t.secondary_nm AS casRN, cc.chem_conc || ' ' || cc.chem_conc_uom_nm AS concentration, cc.ixn_qualifier_nm AS vivoVitro, cc.chem_conc_exp_route_nm AS expRoute, cc.taxon_nm_html AS organism, cc.anatomyTerms AS anatomyTerms, cc.anatomyTerms AS anatomyTermsSort, cc.action_type_cd AS directEvidence, cc.action_type_cd AS directEvidenceSort, d.nm AS diseasenm, d.acc_txt AS diseaseacc, d.acc_db_cd AS diseaseaccdbcd, d.id AS diseaseid, tx.nm AS taxonnm, tx.secondary_nm AS taxoncomnm, tx.id AS taxonid, tx.acc_txt AS taxonacc, rg.refAcc, rg.referenceCount, COUNT(*) OVER () fullRowCount FROM deduplicated_cc cc INNER JOIN term t ON cc.chem_id = t.id INNER JOIN term tx ON cc.taxon_id = tx.id LEFT JOIN term d ON cc.disease_id = d.id INNER JOIN reference_groups rg ON rg.chem_id IS NOT DISTINCT FROM cc.chem_id AND rg.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND rg.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND rg.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND rg.disease_id IS NOT DISTINCT FROM cc.disease_id AND rg.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND rg.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND rg.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND rg.anatomy_ids = cc.anatomy_ids WHERE cc.rn = 1 AND t.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1380020') ORDER BY diseasenm, organism LIMIT 50;
Date: 2026-08-12 10:54:12 Duration: 20s6ms Bind query: yes
5 20s3ms 20s3ms 20s3ms 1 20s3ms with anatomy as ( select chem_conc_id, array_agg(anatomy_id order by anatomy_id) as anatomy_ids, string_agg(distinct anatomy_nm_html || ? || anatomy_acc_txt || ? || position_seq || ? || anatomy_acc_db_id || ? || anatomy_nm, ?) as anatomyterms from chem_conc_anatomy cca group by chem_conc_id ), reference_groups as ( select cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, string_agg(distinct r.acc_txt, ?) as refacc, count(distinct cc.reference_id) as referencecount from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id left join reference r on r.id = cc.reference_id group by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) ), deduplicated_cc as ( select cc.*, coalesce(a.anatomy_ids, array[]::integer[]) as anatomy_ids, a.anatomyterms, row_number() over (partition by cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, coalesce(a.anatomy_ids, array[]::integer[]) order by cc.id) as rn from chem_conc cc left join anatomy a on a.chem_conc_id = cc.id where exists ( select ? from chem_conc cc_ref left join anatomy a_ref on a_ref.chem_conc_id = cc_ref.id where cc_ref.chem_id is not distinct from cc.chem_id and cc_ref.chem_conc is not distinct from cc.chem_conc and cc_ref.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and cc_ref.taxon_id is not distinct from cc.taxon_id and cc_ref.disease_id is not distinct from cc.disease_id and cc_ref.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and cc_ref.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and cc_ref.action_type_cd is not distinct from cc.action_type_cd and coalesce(a_ref.anatomy_ids, array[]::integer[]) = coalesce(a.anatomy_ids, array[]::integer[]))) select cc.chem_id as chem_id, t.nm as chem, t.nm_html as chemnmhtml, t.acc_txt as chemacc, t.secondary_nm as casrn, cc.chem_conc || ? || cc.chem_conc_uom_nm as concentration, cc.ixn_qualifier_nm as vivovitro, cc.chem_conc_exp_route_nm as exproute, cc.taxon_nm_html as organism, cc.anatomyterms as anatomyterms, cc.anatomyterms as anatomytermssort, cc.action_type_cd as directevidence, cc.action_type_cd as directevidencesort, d.nm as diseasenm, d.acc_txt as diseaseacc, d.acc_db_cd as diseaseaccdbcd, d.id as diseaseid, tx.nm as taxonnm, tx.secondary_nm as taxoncomnm, tx.id as taxonid, tx.acc_txt as taxonacc, rg.refacc, rg.referencecount, count(*) over () fullrowcount from deduplicated_cc cc inner join term t on cc.chem_id = t.id inner join term tx on cc.taxon_id = tx.id left join term d on cc.disease_id = d.id inner join reference_groups rg on rg.chem_id is not distinct from cc.chem_id and rg.chem_conc is not distinct from cc.chem_conc and rg.chem_conc_uom_nm is not distinct from cc.chem_conc_uom_nm and rg.taxon_id is not distinct from cc.taxon_id and rg.disease_id is not distinct from cc.disease_id and rg.chem_conc_exp_route_nm is not distinct from cc.chem_conc_exp_route_nm and rg.ixn_qualifier_nm is not distinct from cc.ixn_qualifier_nm and rg.action_type_cd is not distinct from cc.action_type_cd and rg.anatomy_ids = cc.anatomy_ids where cc.rn = ? and t.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) order by diseasenm, organism limit ? offset ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Aug 12 10 1 20s3ms 20s3ms -
WITH anatomy AS ( SELECT chem_conc_id, array_agg(anatomy_id ORDER BY anatomy_id) AS anatomy_ids, string_agg(DISTINCT anatomy_nm_html || '^' || anatomy_acc_txt || '^' || position_seq || '^' || anatomy_acc_db_id || '^' || anatomy_nm, '|') AS anatomyTerms FROM chem_conc_anatomy cca GROUP BY chem_conc_id ), reference_groups AS ( SELECT cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, string_agg(DISTINCT r.acc_txt, '|') AS refAcc, COUNT(DISTINCT cc.reference_id) AS referenceCount FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id LEFT JOIN reference r ON r.id = cc.reference_id GROUP BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ), deduplicated_cc AS ( SELECT cc.*, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) AS anatomy_ids, a.anatomyTerms, ROW_NUMBER() OVER (PARTITION BY cc.chem_id, cc.chem_conc, cc.chem_conc_uom_nm, cc.taxon_id, cc.disease_id, cc.chem_conc_exp_route_nm, cc.ixn_qualifier_nm, cc.action_type_cd, COALESCE(a.anatomy_ids, ARRAY[]::integer[]) ORDER BY cc.id) AS rn FROM chem_conc cc LEFT JOIN anatomy a ON a.chem_conc_id = cc.id WHERE EXISTS ( SELECT 1 FROM chem_conc cc_ref LEFT JOIN anatomy a_ref ON a_ref.chem_conc_id = cc_ref.id WHERE cc_ref.chem_id IS NOT DISTINCT FROM cc.chem_id AND cc_ref.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND cc_ref.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND cc_ref.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND cc_ref.disease_id IS NOT DISTINCT FROM cc.disease_id AND cc_ref.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND cc_ref.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND cc_ref.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND COALESCE(a_ref.anatomy_ids, ARRAY[]::integer[]) = COALESCE(a.anatomy_ids, ARRAY[]::integer[]))) SELECT /* ChemConcentrationDao */ cc.chem_id AS chem_id, t.nm AS chem, t.nm_html AS chemNmHtml, t.acc_txt AS chemAcc, t.secondary_nm AS casRN, cc.chem_conc || ' ' || cc.chem_conc_uom_nm AS concentration, cc.ixn_qualifier_nm AS vivoVitro, cc.chem_conc_exp_route_nm AS expRoute, cc.taxon_nm_html AS organism, cc.anatomyTerms AS anatomyTerms, cc.anatomyTerms AS anatomyTermsSort, cc.action_type_cd AS directEvidence, cc.action_type_cd AS directEvidenceSort, d.nm AS diseasenm, d.acc_txt AS diseaseacc, d.acc_db_cd AS diseaseaccdbcd, d.id AS diseaseid, tx.nm AS taxonnm, tx.secondary_nm AS taxoncomnm, tx.id AS taxonid, tx.acc_txt AS taxonacc, rg.refAcc, rg.referenceCount, COUNT(*) OVER () fullRowCount FROM deduplicated_cc cc INNER JOIN term t ON cc.chem_id = t.id INNER JOIN term tx ON cc.taxon_id = tx.id LEFT JOIN term d ON cc.disease_id = d.id INNER JOIN reference_groups rg ON rg.chem_id IS NOT DISTINCT FROM cc.chem_id AND rg.chem_conc IS NOT DISTINCT FROM cc.chem_conc AND rg.chem_conc_uom_nm IS NOT DISTINCT FROM cc.chem_conc_uom_nm AND rg.taxon_id IS NOT DISTINCT FROM cc.taxon_id AND rg.disease_id IS NOT DISTINCT FROM cc.disease_id AND rg.chem_conc_exp_route_nm IS NOT DISTINCT FROM cc.chem_conc_exp_route_nm AND rg.ixn_qualifier_nm IS NOT DISTINCT FROM cc.ixn_qualifier_nm AND rg.action_type_cd IS NOT DISTINCT FROM cc.action_type_cd AND rg.anatomy_ids = cc.anatomy_ids WHERE cc.rn = 1 AND t.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1380020') ORDER BY diseasenm, organism LIMIT 50 OFFSET 300;
Date: 2026-08-12 10:54:56 Duration: 20s3ms Bind query: yes
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
-
Events
Log levels
Key values
- 324 Event entries
- (EVENTLOG entries are formaly LOG level entries that are not queries)
Events distribution (except queries)
Key values
- 0 PANIC entries
- 0 FATAL entries
- 1 ERROR entries
- 0 WARNING entries
- 14 EVENTLOG entries
Most Frequent Errors/Events
Key values
- 9 Max number of times the same event was reported
- 15 Total events found
Rank Times reported Error 1 9 LOG: could not receive data from client: Connection reset by peer
Times Reported Most Frequent Error / Event #1
Day Hour Count Aug 12 14 5 15 4 2 5 LOG: could not receive data from client: Connection timed out
Times Reported Most Frequent Error / Event #2
Day Hour Count Aug 12 18 5 3 1 ERROR: column "..." must appear in the GROUP BY clause or be used in an aggregate function
Times Reported Most Frequent Error / Event #3
Day Hour Count Aug 12 14 1 - ERROR: column "g.nm" must appear in the GROUP BY clause or be used in an aggregate function at character 116
Statement: SELECT /* GeneChemsDAO */ c.nm chemNm ,c.nm_html chemNmHtml ,c.acc_txt chemAcc ,c.secondary_nm casRN ,c.id chemId ,g.nm ,COUNT(gcr.ixn_id) ixnCount ,COUNT(DISTINCT gcr.taxon_id) taxonCount FROM gene_chem_reference gcr INNER JOIN term c ON gcr.chem_id = c.id INNER JOIN term g ON gcr.gene_id = g.id WHERE gcr.gene_id = 1558936 AND gcr.ixn_id IS NOT NULL GROUP BY c.nm ,c.acc_txt ,c.id ,c.nm_sort ,c.nm_html
Date: 2026-08-12 14:43:57 Database: ctddev51 Application: pgAdmin 4 - CONN:6733208 User: pubeu Remote: