pgBadger-
Global information
- Generated on Sun Jun 30 04:15:14 2024
- Log file: /project/archive/log/postgres/dbprd51/postgresql.log-20240629
- Parsed 168,089 log entries in 13s
- Log start from 2024-06-23 00:00:01 to 2024-06-29 23:59:55
-
Overview
Global Stats
- 579 Number of unique normalized queries
- 6,980 Number of queries
- 1d1h33m53s Total query duration
- 2024-06-23 00:00:15 First query
- 2024-06-29 23:59:55 Last query
- 8 queries/s at 2024-06-26 09:43:55 Query peak
- 1d1h33m53s Total query duration
- 0ms Prepare/parse total duration
- 5s65ms Bind total duration
- 1d1h33m48s Execute total duration
- 1,396 Number of events
- 20 Number of unique normalized events
- 1,038 Max number of times the same event was reported
- 0 Number of cancellation
- 192 Total number of automatic vacuums
- 312 Total number of automatic analyzes
- 2,893 Number temporary file
- 1.00 GiB Max size of temporary file
- 189.60 MiB Average size of temporary file
- 15,544 Total number of sessions
- 114 sessions at 2024-06-25 18:55:45 Session peak
- 321d17h41m13s Total duration of sessions
- 29m48s Average duration of sessions
- 0 Average queries per session
- 5s920ms Average queries duration per session
- 29m42s Average idle time per session
- 15,544 Total number of connections
- 113 connections/s at 2024-06-27 04:22:46 Connection peak
- 2 Total number of databases
SQL Traffic
Key values
- 8 queries/s Query Peak
- 2024-06-26 09:43:55 Date
SELECT Traffic
Key values
- 8 queries/s Query Peak
- 2024-06-26 09:43:55 Date
INSERT/UPDATE/DELETE Traffic
Key values
- 1 queries/s Query Peak
- 2024-06-26 17:15:04 Date
Queries duration
Key values
- 1d1h33m53s Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jun 23 00 43 0ms 16m14s 24s228ms 4s779ms 4s892ms 16m19s 01 31 0ms 10s548ms 1s617ms 2s506ms 3s856ms 10s548ms 02 33 0ms 9m54s 24s47ms 7s498ms 25s390ms 9m54s 03 29 0ms 5s42ms 1s654ms 2s780ms 3s939ms 5s42ms 04 41 0ms 3s953ms 1s404ms 2s517ms 3s715ms 6s175ms 05 96 0ms 29s603ms 3s310ms 19s401ms 25s474ms 44s720ms 06 44 0ms 3m37s 9s204ms 9s504ms 40s684ms 3m37s 07 26 0ms 3m6s 9s495ms 3s845ms 5s413ms 3m10s 08 49 0ms 12s543ms 1s804ms 3s746ms 6s350ms 15s379ms 09 27 0ms 5s142ms 1s963ms 3s910ms 4s846ms 6s523ms 10 39 0ms 33s64ms 4s384ms 5s121ms 20s264ms 57s506ms 11 37 0ms 3s847ms 1s393ms 2s628ms 3s814ms 4s863ms 12 31 0ms 26s778ms 2s447ms 3s467ms 5s43ms 26s778ms 13 54 0ms 3m37s 6s761ms 10s636ms 20s695ms 3m37s 14 60 0ms 33s33ms 2s870ms 5s881ms 9s468ms 53s382ms 15 34 0ms 4m57s 10s433ms 2s575ms 8s43ms 4m57s 16 38 0ms 5s227ms 1s492ms 3s620ms 5s37ms 7s907ms 17 28 0ms 10s688ms 1s727ms 2s483ms 4s920ms 10s688ms 18 55 0ms 1m9s 4s374ms 5s394ms 40s565ms 1m9s 19 44 0ms 21s345ms 1s907ms 3s880ms 8s543ms 24s905ms 20 49 0ms 39s915ms 2s32ms 2s533ms 3s905ms 42s262ms 21 26 0ms 49s651ms 3s308ms 2s363ms 3s486ms 49s651ms 22 32 0ms 11s334ms 2s296ms 5s155ms 5s902ms 15s24ms 23 30 0ms 17s494ms 2s266ms 3s921ms 5s582ms 19s993ms Jun 24 00 29 0ms 16m18s 36s538ms 4s816ms 8s160ms 16m23s 01 36 0ms 5s417ms 1s914ms 3s747ms 6s135ms 9s486ms 02 30 0ms 5s639ms 1s447ms 2s373ms 3s415ms 6s833ms 03 41 0ms 14s735ms 1s963ms 5s76ms 6s789ms 15s896ms 04 31 0ms 6s557ms 2s192ms 5s40ms 6s75ms 6s557ms 05 81 0ms 5s337ms 1s885ms 6s115ms 16s33ms 27s645ms 06 46 0ms 3m49s 13s321ms 9s484ms 53s540ms 3m50s 07 28 0ms 17s319ms 2s822ms 5s5ms 5s212ms 17s319ms 08 26 0ms 4s941ms 1s809ms 3s855ms 4s941ms 8s449ms 09 43 0ms 4s630ms 1s551ms 3s876ms 4s630ms 11s760ms 10 31 0ms 32s988ms 4s645ms 3s737ms 9s496ms 53s430ms 11 52 0ms 12s752ms 1s975ms 4s723ms 6s759ms 15s696ms 12 32 0ms 6s707ms 2s130ms 5s186ms 6s141ms 9s404ms 13 22 0ms 12s511ms 2s148ms 2s459ms 3s9ms 12s511ms 14 54 0ms 33s241ms 3s343ms 4s741ms 9s484ms 54s452ms 15 40 0ms 5s458ms 1s661ms 3s625ms 4s990ms 9s382ms 16 41 0ms 26s612ms 2s580ms 4s899ms 5s545ms 30s518ms 17 56 0ms 17s171ms 2s392ms 7s801ms 13s969ms 21s306ms 18 39 0ms 33s60ms 3s823ms 5s 10s625ms 53s409ms 19 50 0ms 4m40s 14s270ms 6s119ms 2m58s 4m42s 20 53 0ms 5s68ms 1s593ms 3s602ms 5s65ms 9s879ms 21 30 0ms 16s884ms 2s268ms 4s587ms 5s827ms 16s884ms 22 54 0ms 1m18s 2s956ms 5s130ms 6s162ms 1m18s 23 34 0ms 29s295ms 2s252ms 2s654ms 4s894ms 29s295ms Jun 25 00 20 0ms 16m18s 53s455ms 3s952ms 5s719ms 16m23s 01 40 0ms 39s623ms 2s535ms 3s910ms 5s109ms 39s623ms 02 90 0ms 6s769ms 1s992ms 7s901ms 21s568ms 27s359ms 03 34 0ms 4s80ms 1s960ms 3s944ms 4s80ms 7s877ms 04 39 0ms 45s770ms 3s143ms 4s606ms 5s566ms 49s386ms 05 77 0ms 6s362ms 1s987ms 6s362ms 13s926ms 24s941ms 06 39 0ms 33s29ms 4s196ms 7s893ms 12s611ms 54s761ms 07 32 0ms 3m38s 15s760ms 5s942ms 42s604ms 3m38s 08 29 0ms 5s358ms 1s747ms 2s958ms 5s358ms 8s533ms 09 36 0ms 7s54ms 2s101ms 4s651ms 6s594ms 8s224ms 10 55 0ms 34s271ms 3s949ms 6s438ms 35s374ms 53s518ms 11 37 0ms 17s616ms 2s55ms 4s791ms 6s291ms 17s616ms 12 39 0ms 5m5s 10s58ms 5s86ms 17s909ms 5m5s 13 25 0ms 5m11s 1m11s 4m32s 4m56s 10m3s 14 73 0ms 4m51s 43s51ms 5m55s 7m46s 14m20s 15 38 0ms 5s192ms 1s661ms 3s886ms 4s832ms 11s507ms 16 58 0ms 3m45s 18s469ms 1m22s 1m29s 3m45s 17 57 0ms 1m46s 11s426ms 1m6s 1m21s 2m16s 18 34 0ms 42s559ms 5s411ms 7s454ms 40s860ms 54s914ms 19 20 0ms 4s845ms 1s522ms 2s427ms 2s591ms 6s234ms 20 25 0ms 5s294ms 1s891ms 3s900ms 6s97ms 7s441ms 21 26 0ms 52s271ms 4s927ms 5s203ms 14s46ms 52s271ms 22 25 0ms 6s754ms 1s731ms 2s535ms 3s455ms 8s181ms 23 40 0ms 4m47s 38s101ms 2m57s 4m33s 9m23s Jun 26 00 25 0ms 16m16s 1m26s 4m32s 4m40s 16m21s 01 26 0ms 4s150ms 1s884ms 3s971ms 4s150ms 7s687ms 02 24 0ms 5s546ms 1s769ms 2s550ms 5s317ms 10s489ms 03 24 0ms 5s332ms 2s106ms 4s908ms 5s209ms 6s838ms 04 26 0ms 19s488ms 3s523ms 2s596ms 18s814ms 19s488ms 05 60 0ms 4s958ms 2s104ms 12s441ms 24s727ms 29s994ms 06 31 0ms 3m37s 11s444ms 6s556ms 40s708ms 3m38s 07 15 0ms 3s898ms 1s595ms 2s386ms 3s877ms 3s898ms 08 33 0ms 7s668ms 2s172ms 5s445ms 6s207ms 8s876ms 09 560 0ms 17m44s 7s410ms 4m22s 8m48s 17m45s 10 43 0ms 17m28s 27s965ms 4s631ms 9s461ms 18m22s 11 37 0ms 39s688ms 3s72ms 4s944ms 6s83ms 40s876ms 12 29 0ms 37s249ms 2s935ms 2s723ms 3s833ms 42s793ms 13 16 0ms 10m10s 40s693ms 5s144ms 5s246ms 10m10s 14 51 0ms 2m25s 6s738ms 19s759ms 40s868ms 2m25s 15 21 0ms 4s814ms 1s737ms 2s331ms 3s891ms 5s191ms 16 30 0ms 11m25s 39s161ms 7s342ms 1m55s 11m35s 17 43 0ms 34m16s 1m33s 1m7s 3m51s 34m26s 18 54 0ms 10m22s 20s119ms 50s352ms 52s52ms 10m23s 19 19 0ms 37m12s 1m59s 3s744ms 3s919ms 37m12s 20 74 0ms 39m27s 1m2s 1m53s 5m12s 39m27s 21 297 0ms 17m21s 8s806ms 1m46s 4m26s 17m21s 22 72 0ms 12m23s 20s67ms 41s750ms 2m58s 12m23s 23 73 0ms 23m36s 31s382ms 1m22s 1m55s 23m36s Jun 27 00 29 0ms 16m24s 35s447ms 2s364ms 3s544ms 16m31s 01 47 0ms 1h36m6s 2m7s 5s585ms 8s261ms 1h36m7s 02 44 0ms 59m17s 1m29s 7s243ms 59s866ms 59m29s 03 37 0ms 46m21s 1m18s 7s463ms 11s398ms 46m43s 04 38 0ms 11s663ms 2s150ms 4s367ms 5s938ms 19s789ms 05 82 0ms 1h56m7s 1m58s 24s827ms 8m50s 1h56m7s 06 35 0ms 33s157ms 6s375ms 25s385ms 27s493ms 53s443ms 07 75 0ms 39s90ms 3s258ms 18s169ms 36s606ms 54s86ms 08 58 0ms 28s629ms 5s332ms 25s791ms 35s119ms 44s474ms 09 57 0ms 1m13s 6s816ms 24s249ms 53s961ms 1m20s 10 231 0ms 32m13s 12s515ms 36s415ms 48s147ms 33m 11 111 0ms 2m8s 5s755ms 28s450ms 33s940ms 2m23s 12 13 0ms 2s244ms 1s296ms 1s239ms 1s466ms 2s333ms 13 24 0ms 5s819ms 1s870ms 3s659ms 5s819ms 7s694ms 14 51 0ms 2m22s 15s315ms 40s862ms 2m19s 4m19s 15 21 0ms 5m42s 28s572ms 3s897ms 5s518ms 5m42s 16 25 0ms 12s781ms 3s42ms 4s865ms 6s479ms 19s614ms 17 35 0ms 5s631ms 1s597ms 3s321ms 4s764ms 5s631ms 18 33 0ms 1m4s 6s331ms 4s744ms 53s878ms 1m4s 19 28 0ms 4s947ms 1s420ms 2s522ms 3s624ms 7s349ms 20 30 0ms 6s560ms 1s642ms 3s888ms 6s20ms 8s875ms 21 17 0ms 5s524ms 1s751ms 1s515ms 2s605ms 5s524ms 22 26 0ms 3s949ms 1s517ms 2s516ms 3s855ms 5s145ms 23 20 0ms 12s537ms 1s830ms 2s289ms 2s496ms 12s537ms Jun 28 00 21 0ms 17m9s 1m38s 4s955ms 17s941ms 17m9s 01 19 0ms 4s308ms 1s895ms 2s401ms 3s860ms 4s308ms 02 27 0ms 5s300ms 2s27ms 3s827ms 5s494ms 13s530ms 03 18 0ms 5s9ms 2s222ms 3s909ms 3s959ms 5s9ms 04 24 0ms 5s126ms 1s777ms 2s433ms 3s884ms 7s676ms 05 56 0ms 5s149ms 2s132ms 10s211ms 16s553ms 24s355ms 06 49 0ms 33s119ms 3s773ms 10s645ms 17s229ms 53s611ms 07 18 0ms 3m36s 13s570ms 2s377ms 3s906ms 3m36s 08 28 0ms 5s228ms 2s373ms 4s971ms 5s228ms 7s799ms 09 48 0ms 6s116ms 2s723ms 7s468ms 10s709ms 23s172ms 10 43 0ms 33s364ms 4s42ms 6s412ms 13s393ms 53s648ms 11 18 0ms 10s416ms 3s585ms 5s162ms 9s503ms 17s85ms 12 10 0ms 10s385ms 3s808ms 1s332ms 7s863ms 11s70ms 13 18 0ms 9s869ms 2s16ms 2s503ms 2s620ms 11s51ms 14 28 0ms 33s38ms 5s663ms 6s700ms 18s373ms 53s368ms 15 42 0ms 12s775ms 2s677ms 13s667ms 21s685ms 22s437ms 16 14 0ms 5s781ms 1s762ms 2s585ms 3s691ms 5s781ms 17 9 0ms 3s951ms 1s523ms 1s204ms 1s240ms 3s951ms 18 27 0ms 33s226ms 4s944ms 2s484ms 10s876ms 53s569ms 19 22 0ms 35s553ms 2s965ms 1s580ms 3s335ms 37s906ms 20 21 0ms 14s700ms 2s142ms 2s664ms 5s269ms 14s700ms 21 13 0ms 3s996ms 1s561ms 1s354ms 3s996ms 4s169ms 22 22 0ms 1m18s 5s101ms 2s616ms 4s462ms 1m20s 23 23 0ms 4s954ms 1s770ms 2s729ms 3s873ms 5s197ms Jun 29 00 16 0ms 16m20s 1m2s 2s389ms 3s925ms 16m25s 01 22 0ms 42s531ms 3s345ms 1s886ms 3s257ms 42s531ms 02 26 0ms 2s394ms 1s339ms 2s545ms 2s554ms 3s125ms 03 32 0ms 8s435ms 1s444ms 2s407ms 2s485ms 8s435ms 04 25 0ms 5s624ms 2s449ms 2s521ms 4s362ms 26s314ms 05 82 0ms 6s607ms 2s765ms 14s939ms 25s353ms 37s87ms 06 27 0ms 4s92ms 2s282ms 3s975ms 5s459ms 6s850ms 07 31 0ms 3m6s 7s855ms 2s96ms 5s782ms 3m10s 08 16 0ms 4s408ms 1s576ms 2s641ms 3s213ms 4s408ms 09 26 0ms 5s943ms 1s868ms 3s114ms 5s273ms 9s623ms 10 15 0ms 12s880ms 2s527ms 2s377ms 5s346ms 14s25ms 11 17 0ms 5s404ms 1s709ms 1s392ms 3s629ms 5s404ms 12 14 0ms 5s471ms 2s585ms 1s925ms 5s247ms 10s573ms 13 13 0ms 3s102ms 1s383ms 2s270ms 2s633ms 3s102ms 14 9 0ms 2s678ms 1s416ms 1s212ms 1s346ms 3s881ms 15 11 0ms 5s370ms 2s616ms 3s961ms 5s367ms 5s370ms 16 17 0ms 3s903ms 1s431ms 1s525ms 2s386ms 3s903ms 17 15 0ms 5s298ms 1s492ms 1s324ms 2s394ms 5s298ms 18 34 0ms 1m11s 13s772ms 58s230ms 1m11s 1m18s 19 57 0ms 23m27s 1m22s 1m56s 7m15s 23m55s 20 11 0ms 1s942ms 1s283ms 1s444ms 2s379ms 2s499ms 21 19 0ms 6s361ms 1s535ms 2s438ms 4s703ms 8s687ms 22 15 0ms 3s827ms 1s448ms 1s438ms 2s575ms 3s827ms 23 19 0ms 3s941ms 1s394ms 1s315ms 2s680ms 3s941ms Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jun 23 00 42 0 24s687ms 2s397ms 4s779ms 16m14s 01 31 0 1s617ms 1s330ms 2s506ms 10s548ms 02 33 0 24s47ms 2s478ms 7s498ms 9m54s 03 29 0 1s654ms 2s334ms 2s780ms 5s42ms 04 41 0 1s404ms 2s393ms 2s517ms 6s175ms 05 92 0 3s358ms 10s459ms 19s401ms 30s391ms 06 34 10 9s204ms 5s359ms 9s504ms 3m37s 07 26 0 9s495ms 2s342ms 3s845ms 3m10s 08 49 0 1s804ms 2s322ms 3s746ms 12s543ms 09 27 0 1s963ms 1s932ms 3s910ms 5s142ms 10 29 10 4s384ms 2s450ms 5s121ms 53s538ms 11 37 0 1s393ms 2s363ms 2s628ms 4s863ms 12 31 0 2s447ms 1s321ms 3s467ms 26s778ms 13 54 0 6s761ms 2s306ms 10s636ms 39s482ms 14 50 10 2s870ms 2s531ms 5s881ms 53s382ms 15 34 0 10s433ms 1s302ms 2s575ms 4m57s 16 38 0 1s492ms 1s194ms 3s620ms 6s398ms 17 27 0 1s720ms 1s206ms 2s306ms 10s688ms 18 45 10 4s374ms 2s899ms 5s394ms 53s493ms 19 44 0 1s907ms 2s262ms 3s880ms 24s905ms 20 49 0 2s32ms 2s337ms 2s533ms 6s110ms 21 26 0 3s308ms 1s271ms 2s363ms 49s651ms 22 32 0 2s296ms 2s446ms 5s155ms 15s24ms 23 30 0 2s266ms 2s344ms 3s921ms 19s993ms Jun 24 00 28 0 37s667ms 1s326ms 4s816ms 16m18s 01 36 0 1s914ms 2s331ms 3s747ms 7s332ms 02 30 0 1s447ms 1s299ms 2s373ms 6s833ms 03 41 0 1s963ms 2s328ms 5s76ms 15s896ms 04 31 0 2s192ms 3s862ms 5s40ms 6s557ms 05 77 0 1s870ms 2s482ms 5s337ms 24s695ms 06 36 10 13s321ms 3s930ms 9s484ms 3m50s 07 28 0 2s822ms 2s513ms 5s5ms 17s319ms 08 26 0 1s809ms 1s319ms 3s855ms 8s449ms 09 43 0 1s551ms 2s401ms 3s876ms 11s760ms 10 21 10 4s645ms 2s380ms 3s737ms 40s593ms 11 52 0 1s975ms 3s79ms 4s723ms 14s496ms 12 32 0 2s130ms 3s336ms 5s186ms 9s404ms 13 22 0 2s148ms 1s780ms 2s459ms 12s511ms 14 43 10 3s373ms 2s459ms 4s840ms 40s894ms 15 40 0 1s661ms 2s295ms 3s625ms 5s217ms 16 41 0 2s580ms 2s701ms 4s899ms 6s466ms 17 56 0 2s392ms 3s417ms 7s801ms 17s171ms 18 29 10 3s823ms 2s341ms 5s 53s409ms 19 50 0 14s270ms 3s628ms 6s119ms 2m59s 20 53 0 1s593ms 2s466ms 3s602ms 5s475ms 21 30 0 2s268ms 2s285ms 4s587ms 16s884ms 22 54 0 2s956ms 3s545ms 5s130ms 1m18s 23 33 0 2s260ms 2s363ms 2s439ms 29s295ms Jun 25 00 19 0 56s15ms 1s203ms 3s952ms 16m18s 01 40 0 2s535ms 2s371ms 3s910ms 5s242ms 02 90 0 1s992ms 4s369ms 7s901ms 27s359ms 03 34 0 1s960ms 2s486ms 3s944ms 7s877ms 04 39 0 3s143ms 2s813ms 4s606ms 10s594ms 05 74 0 1s964ms 3s866ms 5s825ms 24s724ms 06 29 10 4s196ms 2s185ms 7s893ms 53s600ms 07 32 0 15s760ms 3s538ms 5s942ms 3m38s 08 29 0 1s747ms 1s282ms 2s958ms 6s399ms 09 36 0 2s101ms 2s7ms 4s651ms 7s848ms 10 45 10 3s949ms 3s905ms 6s438ms 41s642ms 11 37 0 2s55ms 2s366ms 4s791ms 17s616ms 12 39 0 10s58ms 3s600ms 5s86ms 5m5s 13 24 0 1m14s 2s457ms 4m32s 10m3s 14 62 10 43s623ms 9s520ms 5m55s 14m20s 15 34 0 1s518ms 2s357ms 3s494ms 6s388ms 16 57 0 18s603ms 36s274ms 1m22s 3m45s 17 54 0 11s930ms 6s233ms 1m6s 1m22s 18 25 9 5s411ms 2s582ms 7s454ms 53s782ms 19 20 0 1s522ms 1s281ms 2s427ms 6s234ms 20 25 0 1s891ms 1s631ms 3s900ms 7s441ms 21 26 0 4s927ms 1s596ms 5s203ms 52s271ms 22 25 0 1s731ms 1s313ms 2s535ms 8s181ms 23 40 0 38s101ms 4s380ms 2m57s 9m23s Jun 26 00 24 0 1m29s 2s389ms 4m32s 16m16s 01 26 0 1s884ms 2s473ms 3s971ms 7s687ms 02 24 0 1s769ms 1s413ms 2s550ms 10s489ms 03 24 0 2s106ms 1s569ms 4s908ms 6s838ms 04 26 0 3s523ms 2s392ms 2s596ms 19s488ms 05 56 0 2s100ms 2s542ms 12s441ms 29s994ms 06 21 10 11s444ms 2s539ms 6s556ms 3m38s 07 15 0 1s595ms 1s310ms 2s386ms 3s898ms 08 33 0 2s172ms 2s798ms 5s445ms 8s876ms 09 559 0 7s417ms 50s307ms 4m22s 12m12s 10 33 10 27s965ms 2s546ms 5s547ms 17m28s 11 37 0 3s72ms 3s707ms 4s944ms 8s189ms 12 29 0 2s935ms 1s412ms 2s723ms 42s793ms 13 16 0 40s693ms 1s367ms 5s144ms 10m10s 14 41 10 6s738ms 2s707ms 19s759ms 2m25s 15 21 0 1s737ms 1s308ms 2s331ms 5s191ms 16 22 0 1s699ms 1s203ms 1s573ms 6s189ms 17 35 0 1m2s 1s349ms 2s454ms 1m7s 18 44 10 20s119ms 11s470ms 50s352ms 10m23s 19 19 0 1m59s 1s439ms 3s744ms 37m12s 20 41 0 1m23s 4s973ms 56s824ms 6m40s 21 296 0 8s821ms 38s923ms 1m46s 17m21s 22 58 0 6s448ms 3s75ms 9s175ms 1m20s 23 42 0 4s635ms 2s412ms 4s934ms 22s109ms Jun 27 00 28 0 36s525ms 1s204ms 2s364ms 4s673ms 01 45 0 2m9s 2s603ms 4s923ms 1h36m7s 02 34 0 1m50s 2s518ms 4s296ms 2m25s 03 32 0 2s965ms 4s42ms 6s317ms 16s535ms 04 38 0 2s150ms 2s360ms 4s367ms 19s789ms 05 78 0 2m4s 5s922ms 24s827ms 33m34s 06 25 10 6s375ms 2s417ms 25s385ms 53s443ms 07 73 0 3s286ms 5s18ms 18s169ms 54s86ms 08 56 0 5s440ms 12s471ms 25s791ms 44s474ms 09 57 0 6s816ms 6s149ms 24s249ms 1m17s 10 219 10 12s604ms 30s236ms 36s415ms 53s649ms 11 109 0 5s819ms 26s244ms 28s441ms 2m23s 12 12 0 1s282ms 1s158ms 1s218ms 2s333ms 13 24 0 1s870ms 1s318ms 3s659ms 7s694ms 14 41 10 15s315ms 9s468ms 40s862ms 4m19s 15 20 0 29s836ms 1s581ms 3s897ms 5m42s 16 25 0 3s42ms 1s556ms 4s865ms 19s614ms 17 35 0 1s597ms 2s471ms 3s321ms 5s631ms 18 23 10 6s331ms 1s570ms 9s542ms 1m4s 19 28 0 1s420ms 1s265ms 2s522ms 7s349ms 20 30 0 1s642ms 2s364ms 3s888ms 8s875ms 21 17 0 1s751ms 1s290ms 1s515ms 5s524ms 22 26 0 1s517ms 1s327ms 2s516ms 5s145ms 23 20 0 1s830ms 1s298ms 2s289ms 12s537ms Jun 28 00 20 0 1m42s 1s244ms 4s955ms 17m9s 01 19 0 1s895ms 1s294ms 2s401ms 4s308ms 02 27 0 2s27ms 2s330ms 3s827ms 13s530ms 03 18 0 2s222ms 1s313ms 3s909ms 5s9ms 04 24 0 1s777ms 1s331ms 2s433ms 7s676ms 05 52 0 2s129ms 2s12ms 10s211ms 24s355ms 06 39 10 3s773ms 4s181ms 9s466ms 53s611ms 07 18 0 13s570ms 1s223ms 2s377ms 3m36s 08 28 0 2s373ms 3s853ms 4s971ms 7s799ms 09 48 0 2s723ms 5s347ms 7s468ms 12s901ms 10 32 10 4s61ms 3s875ms 6s412ms 41s118ms 11 18 0 3s585ms 1s200ms 5s162ms 17s85ms 12 10 0 3s808ms 1s154ms 1s332ms 11s70ms 13 18 0 2s16ms 1s198ms 2s503ms 11s51ms 14 18 10 5s663ms 2s527ms 6s700ms 53s368ms 15 40 0 2s697ms 4s939ms 13s667ms 22s437ms 16 14 0 1s762ms 1s300ms 2s585ms 5s781ms 17 9 0 1s523ms 1s18ms 1s204ms 3s951ms 18 17 10 4s944ms 1s332ms 2s484ms 53s569ms 19 22 0 2s965ms 1s215ms 1s580ms 37s906ms 20 21 0 2s142ms 1s294ms 2s664ms 14s700ms 21 13 0 1s561ms 1s195ms 1s354ms 4s169ms 22 22 0 5s101ms 1s351ms 2s616ms 1m20s 23 23 0 1s770ms 1s383ms 2s729ms 5s197ms Jun 29 00 15 0 1m6s 1s193ms 2s389ms 16m20s 01 22 0 3s345ms 1s298ms 1s886ms 42s531ms 02 26 0 1s339ms 1s314ms 2s545ms 3s125ms 03 32 0 1s444ms 1s320ms 2s407ms 8s435ms 04 25 0 2s449ms 1s341ms 2s521ms 26s314ms 05 78 0 2s794ms 5s363ms 14s939ms 37s87ms 06 27 0 2s282ms 2s956ms 3s975ms 6s850ms 07 31 0 7s855ms 1s452ms 2s96ms 3m10s 08 16 0 1s576ms 1s263ms 2s641ms 4s408ms 09 26 0 1s868ms 1s349ms 3s114ms 9s623ms 10 15 0 2s527ms 1s286ms 2s377ms 14s25ms 11 17 0 1s709ms 1s286ms 1s392ms 5s404ms 12 13 0 2s636ms 1s197ms 1s398ms 10s573ms 13 13 0 1s383ms 1s206ms 2s270ms 3s102ms 14 9 0 1s416ms 0ms 1s212ms 3s881ms 15 11 0 2s616ms 1s294ms 3s961ms 5s370ms 16 17 0 1s431ms 1s208ms 1s525ms 3s903ms 17 15 0 1s492ms 1s209ms 1s324ms 5s298ms 18 8 26 13s772ms 33s922ms 58s230ms 1m18s 19 11 46 1m22s 1m10s 1m56s 23m55s 20 11 0 1s283ms 1s163ms 1s444ms 2s499ms 21 19 0 1s535ms 1s195ms 2s438ms 8s687ms 22 15 0 1s448ms 1s263ms 1s438ms 3s827ms 23 19 0 1s394ms 1s265ms 1s315ms 3s941ms Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jun 23 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jun 24 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jun 25 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 1 0 0 0 10s837ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jun 26 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 4 0 0 0 4m11s 0ms 0ms 1m55s 17 8 0 0 0 3m52s 0ms 0ms 1m53s 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 16 9 0 0 1m22s 0ms 0ms 1m55s Jun 27 00 0 0 0 0 0ms 0ms 0ms 0ms 01 1 0 0 0 2m41s 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jun 28 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jun 29 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare Jun 23 00 0 41 41.00 0.00% 01 0 31 31.00 0.00% 02 0 33 33.00 0.00% 03 0 29 29.00 0.00% 04 0 41 41.00 0.00% 05 0 96 96.00 0.00% 06 0 34 34.00 0.00% 07 0 26 26.00 0.00% 08 0 49 49.00 0.00% 09 0 27 27.00 0.00% 10 0 29 29.00 0.00% 11 0 37 37.00 0.00% 12 0 31 31.00 0.00% 13 0 54 54.00 0.00% 14 0 50 50.00 0.00% 15 0 36 36.00 0.00% 16 0 38 38.00 0.00% 17 0 28 28.00 0.00% 18 0 45 45.00 0.00% 19 0 44 44.00 0.00% 20 0 49 49.00 0.00% 21 0 26 26.00 0.00% 22 0 32 32.00 0.00% 23 0 30 30.00 0.00% Jun 24 00 0 27 27.00 0.00% 01 0 36 36.00 0.00% 02 0 30 30.00 0.00% 03 0 41 41.00 0.00% 04 0 31 31.00 0.00% 05 0 81 81.00 0.00% 06 0 36 36.00 0.00% 07 0 28 28.00 0.00% 08 0 26 26.00 0.00% 09 0 43 43.00 0.00% 10 0 23 23.00 0.00% 11 0 52 52.00 0.00% 12 0 32 32.00 0.00% 13 0 25 25.00 0.00% 14 0 47 47.00 0.00% 15 0 48 48.00 0.00% 16 0 49 49.00 0.00% 17 0 56 56.00 0.00% 18 0 29 29.00 0.00% 19 0 50 50.00 0.00% 20 0 53 53.00 0.00% 21 0 30 30.00 0.00% 22 0 54 54.00 0.00% 23 0 34 34.00 0.00% Jun 25 00 0 19 19.00 0.00% 01 0 40 40.00 0.00% 02 0 90 90.00 0.00% 03 0 34 34.00 0.00% 04 0 39 39.00 0.00% 05 0 77 77.00 0.00% 06 0 29 29.00 0.00% 07 0 32 32.00 0.00% 08 0 29 29.00 0.00% 09 0 40 40.00 0.00% 10 0 47 47.00 0.00% 11 0 37 37.00 0.00% 12 0 39 39.00 0.00% 13 0 26 26.00 0.00% 14 0 63 63.00 0.00% 15 0 34 34.00 0.00% 16 0 56 56.00 0.00% 17 0 58 58.00 0.00% 18 0 25 25.00 0.00% 19 0 20 20.00 0.00% 20 0 25 25.00 0.00% 21 0 26 26.00 0.00% 22 0 25 25.00 0.00% 23 0 40 40.00 0.00% Jun 26 00 0 23 23.00 0.00% 01 0 26 26.00 0.00% 02 0 24 24.00 0.00% 03 0 24 24.00 0.00% 04 0 26 26.00 0.00% 05 0 60 60.00 0.00% 06 0 21 21.00 0.00% 07 0 15 15.00 0.00% 08 0 34 34.00 0.00% 09 0 562 562.00 0.00% 10 0 32 32.00 0.00% 11 0 36 36.00 0.00% 12 0 29 29.00 0.00% 13 0 16 16.00 0.00% 14 0 41 41.00 0.00% 15 0 21 21.00 0.00% 16 0 26 26.00 0.00% 17 0 43 43.00 0.00% 18 0 44 44.00 0.00% 19 0 19 19.00 0.00% 20 0 74 74.00 0.00% 21 0 297 297.00 0.00% 22 0 72 72.00 0.00% 23 0 73 73.00 0.00% Jun 27 00 0 27 27.00 0.00% 01 0 48 48.00 0.00% 02 0 44 44.00 0.00% 03 0 37 37.00 0.00% 04 0 38 38.00 0.00% 05 0 85 85.00 0.00% 06 0 25 25.00 0.00% 07 0 57 57.00 0.00% 08 0 51 51.00 0.00% 09 0 62 62.00 0.00% 10 0 217 217.00 0.00% 11 0 116 116.00 0.00% 12 0 15 15.00 0.00% 13 0 24 24.00 0.00% 14 0 43 43.00 0.00% 15 0 21 21.00 0.00% 16 0 25 25.00 0.00% 17 0 35 35.00 0.00% 18 0 23 23.00 0.00% 19 0 28 28.00 0.00% 20 0 30 30.00 0.00% 21 0 17 17.00 0.00% 22 0 26 26.00 0.00% 23 0 20 20.00 0.00% Jun 28 00 0 19 19.00 0.00% 01 0 19 19.00 0.00% 02 0 27 27.00 0.00% 03 0 18 18.00 0.00% 04 0 24 24.00 0.00% 05 0 56 56.00 0.00% 06 0 39 39.00 0.00% 07 0 18 18.00 0.00% 08 0 28 28.00 0.00% 09 0 48 48.00 0.00% 10 0 35 35.00 0.00% 11 0 21 21.00 0.00% 12 0 10 10.00 0.00% 13 0 18 18.00 0.00% 14 0 19 19.00 0.00% 15 0 43 43.00 0.00% 16 0 14 14.00 0.00% 17 0 9 9.00 0.00% 18 0 17 17.00 0.00% 19 0 22 22.00 0.00% 20 0 21 21.00 0.00% 21 0 13 13.00 0.00% 22 0 22 22.00 0.00% 23 0 23 23.00 0.00% Jun 29 00 0 14 14.00 0.00% 01 0 22 22.00 0.00% 02 0 26 26.00 0.00% 03 0 32 32.00 0.00% 04 0 25 25.00 0.00% 05 0 82 82.00 0.00% 06 0 27 27.00 0.00% 07 0 31 31.00 0.00% 08 0 16 16.00 0.00% 09 0 26 26.00 0.00% 10 0 15 15.00 0.00% 11 0 17 17.00 0.00% 12 0 14 14.00 0.00% 13 0 13 13.00 0.00% 14 0 9 9.00 0.00% 15 0 11 11.00 0.00% 16 0 18 18.00 0.00% 17 0 15 15.00 0.00% 18 0 8 8.00 0.00% 19 0 11 11.00 0.00% 20 0 11 11.00 0.00% 21 0 19 19.00 0.00% 22 0 15 15.00 0.00% 23 0 19 19.00 0.00% Day Hour Count Average / Second Jun 23 00 84 0.02/s 01 86 0.02/s 02 92 0.03/s 03 83 0.02/s 04 80 0.02/s 05 98 0.03/s 06 86 0.02/s 07 88 0.02/s 08 85 0.02/s 09 85 0.02/s 10 83 0.02/s 11 83 0.02/s 12 89 0.02/s 13 86 0.02/s 14 86 0.02/s 15 100 0.03/s 16 88 0.02/s 17 79 0.02/s 18 90 0.03/s 19 82 0.02/s 20 87 0.02/s 21 78 0.02/s 22 85 0.02/s 23 76 0.02/s Jun 24 00 86 0.02/s 01 84 0.02/s 02 80 0.02/s 03 76 0.02/s 04 85 0.02/s 05 98 0.03/s 06 85 0.02/s 07 82 0.02/s 08 96 0.03/s 09 87 0.02/s 10 93 0.03/s 11 101 0.03/s 12 82 0.02/s 13 78 0.02/s 14 90 0.03/s 15 86 0.02/s 16 86 0.02/s 17 80 0.02/s 18 86 0.02/s 19 94 0.03/s 20 93 0.03/s 21 79 0.02/s 22 90 0.03/s 23 87 0.02/s Jun 25 00 82 0.02/s 01 81 0.02/s 02 445 0.12/s 03 81 0.02/s 04 88 0.02/s 05 101 0.03/s 06 85 0.02/s 07 86 0.02/s 08 84 0.02/s 09 119 0.03/s 10 101 0.03/s 11 79 0.02/s 12 82 0.02/s 13 91 0.03/s 14 98 0.03/s 15 106 0.03/s 16 158 0.04/s 17 111 0.03/s 18 84 0.02/s 19 85 0.02/s 20 93 0.03/s 21 85 0.02/s 22 85 0.02/s 23 88 0.02/s Jun 26 00 87 0.02/s 01 74 0.02/s 02 80 0.02/s 03 76 0.02/s 04 88 0.02/s 05 93 0.03/s 06 92 0.03/s 07 77 0.02/s 08 86 0.02/s 09 267 0.07/s 10 106 0.03/s 11 96 0.03/s 12 83 0.02/s 13 91 0.03/s 14 85 0.02/s 15 84 0.02/s 16 87 0.02/s 17 91 0.03/s 18 84 0.02/s 19 78 0.02/s 20 93 0.03/s 21 174 0.05/s 22 103 0.03/s 23 114 0.03/s Jun 27 00 81 0.02/s 01 89 0.02/s 02 89 0.02/s 03 89 0.02/s 04 257 0.07/s 05 92 0.03/s 06 135 0.04/s 07 129 0.04/s 08 197 0.05/s 09 109 0.03/s 10 96 0.03/s 11 115 0.03/s 12 83 0.02/s 13 80 0.02/s 14 92 0.03/s 15 78 0.02/s 16 84 0.02/s 17 80 0.02/s 18 83 0.02/s 19 83 0.02/s 20 79 0.02/s 21 86 0.02/s 22 82 0.02/s 23 82 0.02/s Jun 28 00 80 0.02/s 01 81 0.02/s 02 83 0.02/s 03 80 0.02/s 04 82 0.02/s 05 91 0.03/s 06 79 0.02/s 07 78 0.02/s 08 83 0.02/s 09 114 0.03/s 10 77 0.02/s 11 75 0.02/s 12 75 0.02/s 13 79 0.02/s 14 87 0.02/s 15 92 0.03/s 16 88 0.02/s 17 83 0.02/s 18 89 0.02/s 19 84 0.02/s 20 77 0.02/s 21 71 0.02/s 22 85 0.02/s 23 82 0.02/s Jun 29 00 81 0.02/s 01 80 0.02/s 02 85 0.02/s 03 80 0.02/s 04 73 0.02/s 05 101 0.03/s 06 87 0.02/s 07 87 0.02/s 08 82 0.02/s 09 84 0.02/s 10 92 0.03/s 11 79 0.02/s 12 75 0.02/s 13 77 0.02/s 14 76 0.02/s 15 76 0.02/s 16 82 0.02/s 17 79 0.02/s 18 82 0.02/s 19 81 0.02/s 20 78 0.02/s 21 72 0.02/s 22 78 0.02/s 23 82 0.02/s Day Hour Count Average Duration Average idle time Jun 23 00 84 28m53s 28m41s 01 86 28m21s 28m20s 02 92 26m26s 26m17s 03 83 28m2s 28m1s 04 80 28m42s 28m41s 05 98 23m56s 23m52s 06 86 28m20s 28m16s 07 88 27m12s 27m9s 08 85 27m44s 27m43s 09 85 28m12s 28m11s 10 83 29m20s 29m18s 11 83 29m23s 29m23s 12 88 28m22s 28m21s 13 87 27m15s 27m11s 14 86 27m56s 27m54s 15 100 25m7s 25m4s 16 88 27m26s 27m26s 17 79 30m11s 30m11s 18 90 27m11s 27m9s 19 82 29m30s 29m29s 20 87 26m47s 26m46s 21 78 29m42s 29m41s 22 85 28m41s 28m40s 23 76 29m56s 29m55s Jun 24 00 86 28m52s 28m40s 01 84 29m7s 29m6s 02 80 29m46s 29m45s 03 76 29m10s 29m9s 04 85 28m43s 28m42s 05 98 24m31s 24m29s 06 85 28m17s 28m9s 07 82 29m3s 29m2s 08 96 26m4s 26m3s 09 87 28m20s 28m19s 10 93 25m56s 25m54s 11 101 7h40m49s 7h40m48s 12 82 28m39s 28m38s 13 78 30m42s 30m42s 14 90 26m42s 26m40s 15 86 28m49s 28m48s 16 86 28m15s 28m14s 17 80 29m43s 29m41s 18 86 29m9s 29m7s 19 94 24m28s 24m20s 20 93 25m48s 25m47s 21 78 28m24s 28m23s 22 91 26m15s 26m13s 23 87 27m48s 27m47s Jun 25 00 82 29m40s 29m27s 01 81 30m42s 30m41s 02 445 5m6s 5m6s 03 81 28m48s 28m47s 04 88 27m46s 27m44s 05 101 24m14s 24m13s 06 85 27m57s 27m55s 07 86 28m4s 27m58s 08 84 29m4s 29m4s 09 119 20m38s 20m37s 10 98 25m3s 25m 11 79 30m45s 30m44s 12 82 29m56s 29m51s 13 91 27m49s 27m29s 14 98 24m49s 24m17s 15 102 23m42s 23m41s 16 159 20m29s 20m22s 17 108 26m30s 26m24s 18 84 26m12s 26m9s 19 92 40m25s 40m25s 20 95 31m14s 31m14s 21 85 26m28s 26m26s 22 85 28m50s 28m50s 23 88 27m12s 26m55s Jun 26 00 87 28m38s 28m13s 01 74 28m56s 28m55s 02 80 30m12s 30m11s 03 76 30m49s 30m49s 04 88 28m20s 28m19s 05 93 26m45s 26m44s 06 92 26m26s 26m22s 07 77 30m56s 30m56s 08 84 30m 29m59s 09 266 9m34s 9m18s 10 106 23m52s 23m41s 11 96 24m14s 24m13s 12 84 30m51s 30m50s 13 91 28m44s 28m36s 14 86 28m43s 28m39s 15 84 29m9s 29m9s 16 84 29m28s 29m14s 17 91 25m47s 25m3s 18 84 28m14s 28m2s 19 78 30m5s 29m36s 20 94 34m9s 33m20s 21 174 13m34s 13m19s 22 103 24m2s 23m48s 23 114 21m59s 21m38s Jun 27 00 81 27m35s 27m22s 01 89 27m36s 26m28s 02 91 40m33s 39m50s 03 89 27m33s 27m 04 257 9m36s 9m36s 05 93 29m8s 27m23s 06 131 18m41s 18m39s 07 132 20m5s 20m3s 08 196 13m33s 13m32s 09 100 23m36s 23m32s 10 96 20m30s 19m59s 11 113 23m18s 23m12s 12 80 29m33s 29m33s 13 83 34m58s 34m58s 14 91 27m48s 27m39s 15 79 30m25s 30m18s 16 84 28m41s 28m40s 17 81 37m52s 37m52s 18 87 45m49s 45m47s 19 89 1h8m47s 1h8m46s 20 81 46m1s 46m1s 21 86 29m14s 29m14s 22 82 29m39s 29m38s 23 82 28m22s 28m21s Jun 28 00 80 30m24s 29m58s 01 81 30m3s 30m3s 02 83 29m1s 29m1s 03 80 30m50s 30m50s 04 82 29m38s 29m37s 05 91 23m26s 23m25s 06 79 29m29s 29m26s 07 78 30m27s 30m24s 08 83 29m5s 29m4s 09 112 23m40s 23m39s 10 77 31m25s 31m23s 11 76 33m11s 33m10s 12 75 30m55s 30m55s 13 79 30m59s 30m59s 14 103 25m58s 25m57s 15 75 24m42s 24m41s 16 88 28m36s 28m35s 17 84 30m42s 30m42s 18 90 33m11s 33m9s 19 84 29m5s 29m4s 20 77 31m40s 31m39s 21 71 31m40s 31m39s 22 85 28m47s 28m46s 23 82 29m3s 29m3s Jun 29 00 81 30m20s 30m8s 01 80 30m15s 30m15s 02 85 29m8s 29m8s 03 80 29m15s 29m14s 04 73 31m9s 31m8s 05 101 24m16s 24m14s 06 87 27m47s 27m46s 07 87 28m1s 27m58s 08 82 29m32s 29m32s 09 84 28m51s 28m50s 10 92 26m59s 26m58s 11 79 30m18s 30m18s 12 75 31m19s 31m18s 13 77 30m27s 30m27s 14 76 31m11s 31m11s 15 76 31m32s 31m32s 16 82 30m9s 30m9s 17 79 30m19s 30m19s 18 81 29m58s 29m52s 19 82 30m38s 29m41s 20 78 30m40s 30m40s 21 72 30m38s 30m38s 22 78 31m26s 31m26s 23 82 30m28s 30m28s -
Connections
Established Connections
Key values
- 113 connections Connection Peak
- 2024-06-27 04:22:46 Date
Connections per database
Key values
- ctdprd51 Main Database
- 15,544 connections Total
Connections per user
Key values
- pubeu Main User
- 15,544 connections Total
Connections per host
Key values
- 10.12.5.37 Main host with 4602 connections
- 15,544 Total connections
-
Sessions
Simultaneous sessions
Key values
- 114 sessions Session Peak
- 2024-06-25 18:55:45 Date
Histogram of session times
Key values
- 12,217 1800000-3600000ms duration
Sessions per database
Key values
- ctdprd51 Main Database
- 15,544 sessions Total
Sessions per user
Key values
- pubeu Main User
- 15,544 sessions Total
Sessions per host
Key values
- 10.12.5.37 Main Host
- 15,544 sessions Total
Host Count Total Duration Average Duration 10.12.5.122 12 30d15h22m25s 2d13h16m52s 10.12.5.36 38 1h59m46s 3m9s 10.12.5.37 4,602 56d13h40m2s 17m42s 10.12.5.38 2,644 55d23h47m8s 30m29s 10.12.5.39 2,630 56d3m10s 30m39s 10.12.5.40 173 14h25m35s 5m 10.12.5.45 2,698 56d4m12s 29m53s 10.12.5.46 2,643 55d23h45m 30m30s 192.168.201.10 23 3d3h36m5s 3h17m13s 192.168.201.14 12 4d2h47s 8h10m3s 192.168.201.18 6 18h38m33s 3h6m25s 192.168.201.6 12 1d18h7m54s 3h30m39s ::1 51 2h10m30s 2m33s Sessions per application
Key values
- unknown Main Application
- 15,544 sessions Total
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Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 4,972,428 buffers Checkpoint Peak
- 2024-06-26 23:08:24 Date
- 1620.012 seconds Highest write time
- 0.965 seconds Sync time
Checkpoints Wal files
Key values
- 983 files Wal files usage Peak
- 2024-06-27 02:57:58 Date
Checkpoints distance
Key values
- 18,517.39 Mo Distance Peak
- 2024-06-26 22:47:27 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time Jun 23 00 2,033 203.811s 0.005s 203.858s 01 568 57.106s 0.003s 57.136s 02 50,330 1,650.913s 0.002s 1,651.341s 03 265 26.768s 0.002s 26.802s 04 447 45.004s 0.002s 45.037s 05 330 33.253s 0.002s 33.332s 06 1,102 110.644s 0.004s 110.676s 07 326 32.853s 0.002s 32.883s 08 382 38.452s 0.002s 38.482s 09 3,960 396.604s 0.003s 396.674s 10 10,374 1,039.023s 0.004s 1,039.174s 11 3,953 395.905s 0.003s 395.938s 12 365 36.804s 0.003s 36.835s 13 764 76.749s 0.003s 76.827s 14 5,787 579.822s 0.003s 579.926s 15 385 38.7s 0.003s 38.732s 16 3,322 332.95s 0.004s 333.076s 17 1,010 101.371s 0.003s 101.403s 18 4,722 472.945s 0.003s 473.059s 19 333 33.563s 0.003s 33.594s 20 406 40.869s 0.002s 40.899s 21 251 25.329s 0.002s 25.359s 22 3,371 337.701s 0.003s 337.79s 23 7,057 706.694s 0.006s 706.798s Jun 24 00 1,506 151.148s 0.004s 151.234s 01 2,886 289.335s 0.003s 289.413s 02 429 43.17s 0.002s 43.202s 03 2,646 265.11s 0.003s 265.188s 04 481 48.384s 0.002s 48.461s 05 339 34.175s 0.002s 34.204s 06 829 83.195s 0.002s 83.226s 07 1,323 132.725s 0.002s 132.758s 08 453 45.581s 0.002s 45.613s 09 505 50.815s 0.002s 50.89s 10 57,524 1,659.548s 0.004s 1,659.952s 11 732 73.446s 0.003s 73.481s 12 268 27.044s 0.002s 27.076s 13 6,291 630.327s 0.004s 630.445s 14 5,766 577.767s 0.003s 577.882s 15 499 50.19s 0.002s 50.221s 16 1,960 196.379s 0.002s 196.456s 17 7,060 707.391s 0.004s 707.516s 18 1,088 109.183s 0.003s 109.227s 19 486 48.791s 0.002s 48.822s 20 523 52.603s 0.002s 52.632s 21 573 57.61s 0.004s 57.641s 22 53,969 1,633.849s 0.002s 1,634.321s 23 373 37.46s 0.002s 37.489s Jun 25 00 2,797 280.436s 0.004s 280.52s 01 569 57.187s 0.003s 57.219s 02 3,616 362.393s 0.003s 362.484s 03 529 53.206s 0.002s 53.236s 04 441 44.321s 0.002s 44.352s 05 231 23.358s 0.002s 23.389s 06 868 87.239s 0.003s 87.271s 07 200 20.226s 0.002s 20.257s 08 770 77.25s 0.003s 77.281s 09 2,564 256.986s 0.003s 257.113s 10 458 46.098s 0.002s 46.139s 11 373 37.56s 0.002s 37.59s 12 213 21.465s 0.002s 21.495s 13 456 45.891s 0.002s 45.921s 14 384 38.671s 0.002s 38.702s 15 5,014 502.344s 0.003s 502.445s 16 256,719 1,685.407s 0.777s 1,700.598s 17 24,013 770.648s 0.016s 780.922s 18 1,233 123.681s 0.003s 127.918s 19 263 26.529s 0.002s 26.56s 20 454 45.675s 0.002s 45.704s 21 1,042 104.656s 0.003s 104.689s 22 53,792 1,619.501s 0.002s 1,619.78s 23 201,367 1,662.391s 0.004s 1,662.513s Jun 26 00 1,829 183.461s 0.004s 183.59s 01 1,620 162.494s 0.003s 162.527s 02 280 28.267s 0.002s 28.299s 03 284 28.554s 0.002s 28.587s 04 254 25.637s 0.002s 25.709s 05 484 48.68s 0.002s 48.71s 06 629 63.205s 0.003s 63.235s 07 1,357 136.147s 0.003s 136.177s 08 326 32.876s 0.003s 32.909s 09 122 12.318s 0.001s 12.334s 10 56,899 1,663.123s 0.005s 1,663.311s 11 265 26.644s 0.002s 26.659s 12 33,187 1,651.874s 0.004s 1,651.922s 13 4,930 493.79s 0.004s 493.866s 14 247 24.957s 0.002s 24.988s 15 411 41.272s 0.002s 41.303s 16 1,305,970 1,011.411s 0.335s 1,032.34s 17 1,371,032 2,893.549s 0.14s 2,907.263s 18 672,159 1,619.316s 0.014s 1,623.338s 19 191 19.348s 0.002s 19.378s 20 3,139,384 402.187s 1.552s 440.328s 21 673,964 2,114.32s 0.015s 2,120.763s 22 3,875,068 2,850.035s 0.807s 2,871.947s 23 6,653,725 1,739.796s 0.581s 1,768.794s Jun 27 00 1,183,482 3,348.905s 0.008s 3,356.034s 01 146 14.635s 0.001s 14.651s 02 875,498 2,935.175s 3.385s 3,075.426s 03 658,345 3,248.845s 1.001s 3,280.742s 04 130,944 3,238.941s 0.006s 3,240.463s 05 608,915 1,981.687s 0.144s 1,988.529s 06 587,446 1,701.955s 0.005s 1,705.92s 07 297 29.949s 0.002s 29.979s 08 69,836 1,641.916s 0.003s 1,642.144s 09 318 32.054s 0.002s 32.085s 10 525 52.74s 0.001s 52.756s 11 77,754 4,021.723s 0.004s 4,022.128s 12 2,564 256.986s 0.004s 257.064s 13 624 62.727s 0.003s 62.758s 14 531 53.295s 0.003s 53.331s 15 15,351 1,537.254s 0.003s 1,537.341s 16 271 27.354s 0.002s 27.384s 17 1,079 108.309s 0.004s 108.341s 18 211 21.32s 0.002s 21.352s 19 309 31.062s 0.002s 31.097s 20 461 46.385s 0.003s 46.415s 21 55,637 1,680.637s 0.003s 1,680.824s 22 4,399 440.707s 0.002s 440.789s 23 1,106 110.906s 0.002s 110.984s Jun 28 00 1,605 161.005s 0.003s 161.075s 01 4,364 437.104s 0.003s 437.191s 02 184 18.629s 0.002s 18.66s 03 6,116 612.505s 0.003s 612.593s 04 6,382 639.4s 0.004s 639.489s 05 329 33.167s 0.002s 33.198s 06 888 89.179s 0.003s 89.213s 07 192 19.42s 0.002s 19.451s 08 4,324 433.354s 0.003s 433.436s 09 156 15.621s 0.001s 15.637s 10 164,475 3,300.962s 0.005s 3,301.385s 11 432 43.481s 0.003s 43.523s 12 1,122 112.5s 0.003s 112.53s 13 329 33.141s 0.002s 33.172s 14 316 31.86s 0.002s 31.89s 15 1,412 141.564s 0.004s 141.598s 16 4,538 454.706s 0.004s 454.789s 17 1,054 105.79s 0.003s 105.82s 18 881 88.453s 0.004s 88.483s 19 788 79.043s 0.003s 79.073s 20 825 82.848s 0.002s 82.879s 21 808 81.134s 0.002s 81.165s 22 929 93.276s 0.003s 93.306s 23 1,221 122.515s 0.004s 122.547s Jun 29 00 1,562 156.704s 0.004s 156.825s 01 711 71.323s 0.002s 71.353s 02 690 69.323s 0.002s 69.353s 03 846 84.944s 0.003s 84.976s 04 7,273 728.362s 0.002s 728.451s 05 54,700 2,156.013s 0.004s 2,156.195s 06 8,208 822.024s 0.004s 822.109s 07 552 55.493s 0.003s 55.525s 08 560 56.294s 0.002s 56.324s 09 641 64.211s 0.003s 64.255s 10 550 55.294s 0.002s 55.324s 11 559 56.185s 0.002s 56.216s 12 395 39.775s 0.002s 39.806s 13 506 50.874s 0.002s 50.904s 14 363 36.548s 0.002s 36.578s 15 437 43.98s 0.002s 44.01s 16 408 41.058s 0.003s 41.087s 17 658 66.003s 0.003s 66.035s 18 559 56.172s 0.003s 56.203s 19 384 38.554s 0.002s 38.574s 20 116,878 1,697.92s 0.003s 1,697.967s 21 360 36.252s 0.002s 36.282s 22 306 30.859s 0.002s 30.891s 23 752 75.519s 0.002s 75.56s Day Hour Added Removed Recycled Synced files Longest sync Average sync Jun 23 00 0 0 1 82 0.001s 0.002s 01 0 0 0 37 0.001s 0.002s 02 0 0 33 48 0.001s 0.002s 03 0 0 0 32 0.001s 0.002s 04 0 0 0 53 0.001s 0.002s 05 0 0 1 38 0.001s 0.002s 06 0 0 0 35 0.001s 0.002s 07 0 0 0 37 0.001s 0.002s 08 0 0 0 41 0.001s 0.002s 09 0 0 3 45 0.001s 0.002s 10 0 0 7 62 0.001s 0.002s 11 0 0 0 53 0.001s 0.002s 12 0 0 0 29 0.001s 0.002s 13 0 0 1 30 0.001s 0.002s 14 0 0 3 45 0.001s 0.002s 15 0 0 0 66 0.001s 0.002s 16 0 0 2 127 0.001s 0.002s 17 0 0 0 38 0.001s 0.002s 18 0 0 4 43 0.001s 0.002s 19 0 0 0 31 0.001s 0.002s 20 0 0 0 28 0.001s 0.002s 21 0 0 0 22 0.001s 0.002s 22 0 0 2 37 0.001s 0.002s 23 0 0 3 42 0.001s 0.002s Jun 24 00 0 0 1 89 0.001s 0.002s 01 0 0 1 46 0.001s 0.002s 02 0 0 0 37 0.001s 0.002s 03 0 0 1 47 0.001s 0.002s 04 0 0 1 45 0.001s 0.002s 05 0 0 0 43 0.001s 0.002s 06 0 0 0 45 0.001s 0.002s 07 0 0 0 35 0.001s 0.002s 08 0 0 0 42 0.001s 0.002s 09 0 0 1 158 0.001s 0.002s 10 0 0 31 243 0.001s 0.002s 11 0 0 0 217 0.001s 0.002s 12 0 0 0 62 0.001s 0.002s 13 0 0 4 118 0.001s 0.002s 14 0 0 4 129 0.001s 0.002s 15 0 0 0 117 0.001s 0.002s 16 0 0 1 135 0.001s 0.002s 17 0 0 5 70 0.001s 0.002s 18 0 0 1 46 0.001s 0.002s 19 0 0 0 30 0.001s 0.002s 20 0 0 0 31 0.001s 0.002s 21 0 0 0 29 0.001s 0.002s 22 0 0 36 34 0.001s 0.002s 23 0 0 0 20 0.001s 0.002s Jun 25 00 0 0 1 78 0.001s 0.002s 01 0 0 0 50 0.001s 0.002s 02 0 0 2 60 0.001s 0.002s 03 0 0 0 47 0.001s 0.002s 04 0 0 0 44 0.001s 0.002s 05 0 0 0 33 0.001s 0.002s 06 0 0 0 46 0.001s 0.002s 07 0 0 0 23 0.001s 0.002s 08 0 0 0 50 0.001s 0.002s 09 0 0 2 140 0.001s 0.002s 10 0 0 0 128 0.001s 0.002s 11 0 0 0 28 0.001s 0.002s 12 0 0 0 24 0.001s 0.002s 13 0 0 0 70 0.001s 0.002s 14 0 0 0 34 0.001s 0.002s 15 0 0 3 44 0.001s 0.002s 16 0 172 1,076 964 0.309s 0.01s 17 0 0 819 195 0.002s 0.002s 18 0 0 341 61 0.001s 0.002s 19 0 0 0 23 0.001s 0.002s 20 0 0 0 31 0.001s 0.002s 21 0 0 0 35 0.001s 0.002s 22 0 68 0 25 0.001s 0.001s 23 0 2 0 57 0.001s 0.003s Jun 26 00 0 1 0 74 0.001s 0.002s 01 0 0 0 50 0.001s 0.002s 02 0 0 0 28 0.001s 0.002s 03 0 0 0 36 0.001s 0.002s 04 0 1 0 28 0.001s 0.002s 05 0 0 0 43 0.001s 0.002s 06 0 0 0 43 0.001s 0.002s 07 0 0 0 34 0.001s 0.002s 08 0 0 0 73 0.001s 0.002s 09 0 0 0 11 0.001s 0.001s 10 0 33 0 80 0.001s 0.003s 11 0 0 0 30 0.001s 0.001s 12 0 0 0 71 0.001s 0.003s 13 0 3 0 43 0.001s 0.002s 14 0 0 0 25 0.001s 0.002s 15 0 0 0 41 0.001s 0.002s 16 0 31 1,615 301 0.112s 0.006s 17 0 0 1,076 174 0.044s 0.004s 18 0 0 322 238 0.001s 0.001s 19 0 0 0 25 0.001s 0.002s 20 0 32 2,676 180 0.788s 0.064s 21 0 0 511 134 0.001s 0.002s 22 0 0 1,516 182 0.780s 0.02s 23 0 451 2,152 528 0.446s 0.01s Jun 27 00 0 0 569 204 0.002s 0.003s 01 0 0 0 19 0.001s 0.001s 02 0 677 9,352 864 0.827s 0.173s 03 0 86 2,316 409 0.848s 0.012s 04 0 14 97 79 0.001s 0.002s 05 0 36 538 161 0.088s 0.004s 06 0 0 318 135 0.001s 0.003s 07 0 0 0 23 0.001s 0.002s 08 0 38 0 66 0.001s 0.002s 09 0 0 0 118 0.001s 0.002s 10 0 0 0 70 0.001s 0.001s 11 0 47 0 202 0.001s 0.003s 12 0 1 0 140 0.001s 0.002s 13 0 0 0 139 0.001s 0.002s 14 0 1 0 59 0.001s 0.002s 15 0 3 0 98 0.001s 0.002s 16 0 0 0 103 0.001s 0.002s 17 0 0 0 143 0.001s 0.002s 18 0 0 0 27 0.001s 0.002s 19 0 1 0 33 0.001s 0.002s 20 0 0 0 26 0.001s 0.002s 21 0 37 0 48 0.001s 0.002s 22 0 2 0 44 0.001s 0.002s 23 0 1 0 55 0.001s 0.002s Jun 28 00 0 0 0 75 0.001s 0.002s 01 0 3 0 51 0.001s 0.002s 02 0 0 0 34 0.001s 0.002s 03 0 3 0 53 0.001s 0.002s 04 0 4 0 53 0.001s 0.002s 05 0 0 0 41 0.001s 0.002s 06 0 0 0 52 0.001s 0.002s 07 0 0 0 28 0.001s 0.002s 08 0 2 0 49 0.001s 0.002s 09 0 0 0 19 0.001s 0.001s 10 0 100 0 150 0.001s 0.003s 11 0 1 0 121 0.001s 0.002s 12 0 0 0 121 0.001s 0.002s 13 0 0 0 79 0.001s 0.002s 14 0 0 0 66 0.001s 0.002s 15 0 0 0 84 0.001s 0.002s 16 0 3 0 44 0.001s 0.002s 17 0 0 0 30 0.001s 0.002s 18 0 0 0 24 0.001s 0.002s 19 0 0 0 22 0.001s 0.002s 20 0 0 0 29 0.001s 0.002s 21 0 0 0 22 0.001s 0.002s 22 0 0 0 33 0.001s 0.002s 23 0 0 0 35 0.001s 0.002s Jun 29 00 0 1 0 88 0.001s 0.002s 01 0 0 0 38 0.001s 0.002s 02 0 0 0 37 0.001s 0.002s 03 0 0 0 38 0.001s 0.002s 04 0 4 0 42 0.001s 0.002s 05 0 37 0 55 0.001s 0.002s 06 0 3 0 58 0.001s 0.002s 07 0 0 0 32 0.001s 0.002s 08 0 0 0 31 0.001s 0.002s 09 0 1 0 24 0.001s 0.002s 10 0 0 0 33 0.001s 0.002s 11 0 0 0 32 0.001s 0.002s 12 0 0 0 21 0.001s 0.002s 13 0 0 0 31 0.001s 0.002s 14 0 0 0 22 0.001s 0.002s 15 0 0 0 29 0.001s 0.002s 16 0 0 0 61 0.001s 0.002s 17 0 0 0 62 0.001s 0.002s 18 0 0 0 41 0.001s 0.002s 19 0 0 0 13 0.001s 0.001s 20 0 0 0 48 0.001s 0.003s 21 0 0 0 20 0.001s 0.002s 22 0 0 0 21 0.001s 0.002s 23 0 1 0 40 0.001s 0.002s Day Hour Count Avg time (sec) Jun 23 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jun 24 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jun 25 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jun 26 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jun 27 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jun 28 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jun 29 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Day Hour Mean distance Mean estimate Jun 23 00 8,634.00 kB 33,894.00 kB 01 577.50 kB 27,990.00 kB 02 274,131.00 kB 285,863.00 kB 03 631.00 kB 468,452.50 kB 04 1,088.00 kB 379,632.50 kB 05 787.50 kB 307,665.50 kB 06 1,034.00 kB 249,416.00 kB 07 732.00 kB 202,158.00 kB 08 893.50 kB 163,905.00 kB 09 18,489.50 kB 134,677.00 kB 10 52,568.00 kB 116,427.50 kB 11 15,081.50 kB 101,429.00 kB 12 799.00 kB 82,318.50 kB 13 2,407.50 kB 67,137.00 kB 14 29,590.00 kB 57,814.00 kB 15 993.00 kB 49,946.50 kB 16 13,827.50 kB 41,980.00 kB 17 2,145.00 kB 35,552.00 kB 18 25,745.00 kB 40,617.50 kB 19 878.50 kB 43,597.50 kB 20 1,026.00 kB 35,480.00 kB 21 597.00 kB 28,892.00 kB 22 13,696.00 kB 25,991.50 kB 23 30,463.00 kB 44,659.50 kB Jun 24 00 7,010.50 kB 37,854.50 kB 01 9,501.00 kB 31,948.50 kB 02 913.00 kB 26,826.50 kB 03 8,392.00 kB 22,653.50 kB 04 1,377.00 kB 19,298.50 kB 05 846.00 kB 15,796.50 kB 06 1,146.50 kB 13,008.50 kB 07 3,691.50 kB 10,962.50 kB 08 1,146.50 kB 9,397.50 kB 09 1,238.50 kB 7,793.50 kB 10 256,970.50 kB 259,418.50 kB 11 2,402.00 kB 438,021.50 kB 12 584.00 kB 355,003.00 kB 13 30,705.50 kB 293,247.50 kB 14 29,894.50 kB 240,726.50 kB 15 1,399.00 kB 197,853.50 kB 16 7,201.00 kB 161,570.00 kB 17 32,689.00 kB 134,786.50 kB 18 14,885.00 kB 114,388.00 kB 19 1,051.50 kB 92,810.50 kB 20 1,021.50 kB 75,378.50 kB 21 1,040.00 kB 61,261.00 kB 22 295,321.50 kB 560,405.00 kB 23 790.50 kB 454,078.50 kB Jun 25 00 8,627.50 kB 369,018.00 kB 01 1,474.50 kB 299,624.50 kB 02 11,476.00 kB 244,096.00 kB 03 1,400.00 kB 198,691.00 kB 04 811.50 kB 161,154.00 kB 05 545.00 kB 130,658.00 kB 06 1,163.50 kB 106,018.50 kB 07 401.50 kB 85,983.50 kB 08 2,017.50 kB 69,903.00 kB 09 8,301.00 kB 57,623.00 kB 10 1,161.00 kB 47,551.00 kB 11 594.50 kB 38,669.50 kB 12 512.50 kB 31,421.50 kB 13 1,114.00 kB 25,636.50 kB 14 698.50 kB 20,901.00 kB 15 24,808.00 kB 43,952.00 kB 16 4,980,766.00 kB 4,987,754.75 kB 17 6,704,860.50 kB 8,607,844.50 kB 18 3,058,836.50 kB 8,122,321.00 kB 19 480.00 kB 6,579,173.00 kB 20 997.00 kB 5,329,286.00 kB 21 3,056.50 kB 4,317,332.50 kB 22 589,664.00 kB 3,740,086.00 kB 23 183,471.00 kB 3,090,324.00 kB Jun 26 00 6,666.00 kB 2,370,337.00 kB 01 4,575.00 kB 1,920,698.00 kB 02 284.50 kB 1,556,191.50 kB 03 428.00 kB 1,260,598.50 kB 04 310.00 kB 1,021,158.00 kB 05 637.00 kB 827,232.00 kB 06 560.50 kB 670,187.00 kB 07 669.00 kB 542,979.00 kB 08 574.50 kB 439,887.50 kB 09 301.00 kB 375,139.00 kB 10 181,837.67 kB 491,174.33 kB 11 1,396.00 kB 396,598.00 kB 12 590.00 kB 322,545.33 kB 13 23,307.00 kB 251,724.50 kB 14 378.00 kB 203,990.50 kB 15 998.00 kB 165,366.50 kB 16 6,609,557.00 kB 6,644,739.75 kB 17 8,813,693.00 kB 8,818,504.00 kB 18 5,802,647.00 kB 8,516,756.00 kB 19 448.50 kB 7,281,896.50 kB 20 7,381,499.50 kB 8,506,481.17 kB 21 4,189,551.00 kB 8,468,442.50 kB 22 7,943,954.00 kB 8,879,879.00 kB 23 8,812,094.75 kB 9,329,348.00 kB Jun 27 00 3,286,127.33 kB 8,383,657.67 kB 01 762.00 kB 6,796,729.00 kB 02 8,382,206.70 kB 8,878,258.30 kB 03 8,872,062.75 kB 9,042,933.00 kB 04 1,063,524.00 kB 7,914,564.00 kB 05 4,550,838.50 kB 7,801,452.00 kB 06 1,910,013.00 kB 7,683,023.00 kB 07 451.00 kB 5,890,411.50 kB 08 312,044.00 kB 4,830,514.50 kB 09 754.00 kB 3,912,866.50 kB 10 1,098.00 kB 3,336,382.00 kB 11 258,488.00 kB 2,763,542.00 kB 12 7,188.50 kB 2,139,451.50 kB 13 1,998.50 kB 1,733,897.50 kB 14 1,290.00 kB 1,404,647.00 kB 15 28,088.00 kB 1,143,128.50 kB 16 637.50 kB 926,073.50 kB 17 2,897.50 kB 750,633.00 kB 18 520.00 kB 608,157.00 kB 19 777.50 kB 492,727.50 kB 20 709.50 kB 399,261.50 kB 21 304,955.00 kB 575,756.00 kB 22 19,771.00 kB 470,268.50 kB 23 3,149.00 kB 381,451.00 kB Jun 28 00 4,647.00 kB 309,875.00 kB 01 19,196.00 kB 253,022.00 kB 02 494.00 kB 206,723.00 kB 03 26,212.50 kB 172,424.00 kB 04 31,989.50 kB 143,125.00 kB 05 893.00 kB 118,709.00 kB 06 1,008.50 kB 96,346.50 kB 07 471.50 kB 78,131.50 kB 08 14,842.00 kB 64,873.00 kB 09 785.00 kB 56,724.00 kB 10 549,395.33 kB 1,025,755.67 kB 11 1,180.00 kB 802,330.00 kB 12 3,118.50 kB 650,522.50 kB 13 839.00 kB 527,065.00 kB 14 570.00 kB 427,046.50 kB 15 994.00 kB 346,103.00 kB 16 19,092.00 kB 282,299.00 kB 17 664.00 kB 230,438.00 kB 18 502.00 kB 186,771.50 kB 19 530.00 kB 151,383.50 kB 20 713.50 kB 122,760.00 kB 21 582.50 kB 99,544.00 kB 22 954.00 kB 80,806.00 kB 23 2,853.50 kB 65,998.00 kB Jun 29 00 4,223.00 kB 54,198.00 kB 01 612.00 kB 44,077.50 kB 02 587.50 kB 35,817.00 kB 03 1,113.50 kB 29,216.50 kB 04 29,177.50 kB 41,519.50 kB 05 302,086.50 kB 523,753.50 kB 06 29,449.00 kB 432,086.00 kB 07 580.00 kB 350,325.50 kB 08 623.50 kB 283,877.00 kB 09 538.50 kB 230,065.50 kB 10 649.50 kB 186,474.00 kB 11 591.50 kB 151,137.50 kB 12 404.00 kB 122,517.50 kB 13 647.00 kB 99,340.50 kB 14 393.50 kB 80,564.50 kB 15 627.50 kB 65,356.00 kB 16 583.50 kB 53,047.00 kB 17 732.50 kB 43,124.00 kB 18 753.00 kB 35,076.50 kB 19 558.00 kB 29,984.00 kB 20 701.67 kB 24,508.33 kB 21 449.00 kB 18,922.00 kB 22 336.50 kB 15,399.00 kB 23 1,253.00 kB 12,693.00 kB -
Temporary Files
Size of temporary files
Key values
- 15.00 GiB Temp Files size Peak
- 2024-06-26 20:00:18 Date
Number of temporary files
Key values
- 24 per second Temp Files Peak
- 2024-06-27 02:22:32 Date
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size Jun 23 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jun 24 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jun 25 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 806 24.86 GiB 31.58 MiB 17 202 17.79 GiB 90.17 MiB 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jun 26 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 115 5.14 GiB 45.81 MiB 17 0 0 0 18 24 23.69 GiB 1010.58 MiB 19 46 45.32 GiB 1008.95 MiB 20 331 172.93 GiB 535.00 MiB 21 175 16.01 GiB 93.68 MiB 22 75 27.98 GiB 381.97 MiB 23 91 2.91 GiB 32.73 MiB Jun 27 00 0 0 0 01 0 0 0 02 732 137.21 GiB 191.94 MiB 03 247 13.94 GiB 57.81 MiB 04 0 0 0 05 8 7.85 GiB 1005.16 MiB 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 41 40.02 GiB 999.60 MiB 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jun 28 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jun 29 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Queries generating the most temporary files (N)
Rank Count Total size Min size Max size Avg size Query 1 1,193 66.52 GiB 8.00 KiB 1.00 GiB 57.10 MiB select * from pgbulkload.pg_bulkload (?);-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.GENE_DISEASE_REFERENCE,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.log,parse-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.DUPE}');
Date: 2024-06-26 20:11:16 Duration: 6m27s Database: ctdprd51 User: load Application: pg_bulkload
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.DAG_PATH,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.log,parse-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.DUPE}');
Date: 2024-06-26 20:38:46 Duration: 5m12s
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=edit.DB_LINK,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.log,parse-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.DUPE}');
Date: 2024-06-25 16:46:47 Duration: 3m45s
2 897 148.49 GiB 128.00 KiB 1.00 GiB 169.51 MiB vacuum full analyze;-
VACUUM FULL ANALYZE;
Date: 2024-06-27 03:06:26 Duration: 46m21s
-
VACUUM FULL ANALYZE;
Date: 2024-06-27 02:20:19 Duration: 0ms
3 65 64.65 GiB 665.14 MiB 1.00 GiB 1018.48 MiB select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.gene_go_annot gga, pub2.phenotype_term_reference ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in;-
select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.GENE_GO_ANNOT gga, pub2.PHENOTYPE_TERM_REFERENCE ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in;
Date: 2024-06-26 20:00:15 Duration: 0ms
4 62 1.97 GiB 6.88 MiB 1.00 GiB 32.56 MiB cluster pub2.term;-
CLUSTER pub2.TERM;
Date: 2024-06-27 02:19:28 Duration: 59s866ms
-
CLUSTER pub2.TERM;
Date: 2024-06-27 02:18:38 Duration: 0ms
5 46 45.32 GiB 331.61 MiB 1.00 GiB 1008.95 MiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.object_type where cd = ?), ptr.term_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.phenotype_term_reference ptr, pub2.phenotype_term_reference ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;-
select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;
Date: 2024-06-26 19:20:42 Duration: 0ms
6 41 40.02 GiB 23.60 MiB 1.00 GiB 999.60 MiB select ;-
SELECT /* ChemDiseaseAssnsDAO */ ;
Date: 2024-06-26 09:43:38 Duration: 2s182ms Database: ctdprd51 User: pubeu
-
SELECT /* GeneBrowseTermsDAO */ ;
Date: 2024-06-26 09:22:30 Duration: 1s520ms
-
SELECT /* GeneBrowseTermsDAO */ ;
Date: 2024-06-26 09:22:14 Duration: 1s512ms Database: ctdprd51 User: pubeu
7 35 3.48 GiB 58.38 MiB 135.93 MiB 101.81 MiB vacuum full analyze db_link;-
vacuum FULL analyze db_link;
Date: 2024-06-26 16:12:54 Duration: 1m31s
-
vacuum FULL analyze db_link;
Date: 2024-06-26 16:11:39 Duration: 0ms
8 35 1.10 GiB 22.59 MiB 45.72 MiB 32.22 MiB vacuum full analyze ixn_actor;-
vacuum FULL analyze ixn_actor;
Date: 2024-06-26 16:10:34 Duration: 23s658ms
-
vacuum FULL analyze ixn_actor;
Date: 2024-06-26 16:10:17 Duration: 0ms Database: ctdprd51 User: edit Application: pgAdmin 4 - CONN:749457
9 25 361.98 MiB 10.66 MiB 19.71 MiB 14.48 MiB vacuum full analyze ixn;-
vacuum FULL analyze ixn;
Date: 2024-06-26 16:11:14 Duration: 7s342ms
-
vacuum FULL analyze ixn;
Date: 2024-06-26 16:11:09 Duration: 0ms
10 25 15.71 GiB 8.00 KiB 1.00 GiB 643.68 MiB alter table pub2.term_enrichment_agent add constraint term_enrichment_agent_pk primary key (term_id, enriched_term_id, agent_term_id);-
ALTER TABLE pub2.term_enrichment_agent ADD CONSTRAINT term_enrichment_agent_pk PRIMARY KEY (term_id, enriched_term_id, agent_term_id);
Date: 2024-06-26 22:47:45 Duration: 2m54s
-
ALTER TABLE pub2.term_enrichment_agent ADD CONSTRAINT term_enrichment_agent_pk PRIMARY KEY (term_id, enriched_term_id, agent_term_id);
Date: 2024-06-26 22:47:44 Duration: 0ms
11 24 23.69 GiB 701.93 MiB 1.00 GiB 1010.58 MiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, to_char(cdr.mod_tm, ?) from pub2.gene_chem_reference gcr, pub2.chem_disease_reference cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = ? and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;-
select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;
Date: 2024-06-26 18:39:38 Duration: 0ms
12 20 12.29 GiB 8.00 KiB 1.00 GiB 629.41 MiB create unique index gene_disease_reference_ak1 on pub2.gene_disease_reference using btree (gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id);-
CREATE UNIQUE INDEX gene_disease_reference_ak1 ON pub2.gene_disease_reference USING btree (gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id);
Date: 2024-06-26 20:16:42 Duration: 3m2s
-
CREATE UNIQUE INDEX gene_disease_reference_ak1 ON pub2.gene_disease_reference USING btree (gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id);
Date: 2024-06-26 20:16:41 Duration: 0ms
13 20 702.91 MiB 20.67 MiB 64.92 MiB 35.15 MiB cluster pub2.term_label;-
CLUSTER pub2.TERM_LABEL;
Date: 2024-06-27 02:20:03 Duration: 34s953ms
-
CLUSTER pub2.TERM_LABEL;
Date: 2024-06-27 02:19:34 Duration: 0ms
14 20 215.01 MiB 6.19 MiB 16.63 MiB 10.75 MiB vacuum full analyze term;-
vacuum FULL analyze TERM;
Date: 2024-06-26 16:10:36 Duration: 10s805ms
-
vacuum FULL analyze TERM;
Date: 2024-06-26 16:10:27 Duration: 0ms Database: ctdprd51 User: load Application: pgAdmin 4 - CONN:3182627
15 15 11.22 GiB 225.07 MiB 1.00 GiB 766.28 MiB create index ix_term_enrich_agent_enr_term on pub2.term_enrichment_agent using btree (enriched_term_id);-
CREATE INDEX ix_term_enrich_agent_enr_term ON pub2.term_enrichment_agent USING btree (enriched_term_id);
Date: 2024-06-26 22:44:51 Duration: 1m44s
-
CREATE INDEX ix_term_enrich_agent_enr_term ON pub2.term_enrichment_agent USING btree (enriched_term_id);
Date: 2024-06-26 22:44:50 Duration: 0ms
16 15 6.83 GiB 8.00 KiB 1.00 GiB 466.23 MiB alter table pub2.gene_disease_reference add constraint gene_disease_reference_pk primary key (id);-
ALTER TABLE pub2.gene_disease_reference ADD CONSTRAINT gene_disease_reference_pk PRIMARY KEY (id);
Date: 2024-06-26 20:13:39 Duration: 1m12s
-
ALTER TABLE pub2.gene_disease_reference ADD CONSTRAINT gene_disease_reference_pk PRIMARY KEY (id);
Date: 2024-06-26 20:13:39 Duration: 0ms Database: ctdprd51 User: pub2
17 10 6.83 GiB 344.55 MiB 1.00 GiB 699.35 MiB create index ix_gene_disease_ref_disease on pub2.gene_disease_reference using btree (disease_id);-
CREATE INDEX ix_gene_disease_ref_disease ON pub2.gene_disease_reference USING btree (disease_id);
Date: 2024-06-26 20:21:18 Duration: 1m23s
-
CREATE INDEX ix_gene_disease_ref_disease ON pub2.gene_disease_reference USING btree (disease_id);
Date: 2024-06-26 20:21:17 Duration: 0ms
18 10 156.34 MiB 8.00 KiB 32.97 MiB 15.63 MiB alter table pub2.term_enrichment add constraint term_enrichment_pk primary key (term_id, enriched_term_id);-
ALTER TABLE pub2.term_enrichment ADD CONSTRAINT term_enrichment_pk PRIMARY KEY (term_id, enriched_term_id);
Date: 2024-06-26 22:30:43 Duration: 1s977ms
-
ALTER TABLE pub2.term_enrichment ADD CONSTRAINT term_enrichment_pk PRIMARY KEY (term_id, enriched_term_id);
Date: 2024-06-26 22:30:43 Duration: 0ms
19 10 6.83 GiB 293.16 MiB 1.00 GiB 699.35 MiB create index ix_gene_disease_ref_chem on pub2.gene_disease_reference using btree (via_chem_id);-
CREATE INDEX ix_gene_disease_ref_chem ON pub2.gene_disease_reference USING btree (via_chem_id);
Date: 2024-06-26 20:19:54 Duration: 1m25s
-
CREATE INDEX ix_gene_disease_ref_chem ON pub2.gene_disease_reference USING btree (via_chem_id);
Date: 2024-06-26 20:19:54 Duration: 0ms
20 10 627.66 MiB 8.00 KiB 126.98 MiB 62.77 MiB alter table pub2.gene_disease add constraint gene_disease_pk primary key (gene_id, disease_id);-
ALTER TABLE pub2.gene_disease ADD CONSTRAINT gene_disease_pk PRIMARY KEY (gene_id, disease_id);
Date: 2024-06-26 23:01:27 Duration: 6s167ms
-
ALTER TABLE pub2.gene_disease ADD CONSTRAINT gene_disease_pk PRIMARY KEY (gene_id, disease_id);
Date: 2024-06-26 23:01:27 Duration: 0ms
21 10 1005.77 MiB 8.00 KiB 209.88 MiB 100.58 MiB alter table pub2.phenotype_term_reference add constraint phenotype_term_reference_pk primary key (id);-
ALTER TABLE pub2.phenotype_term_reference ADD CONSTRAINT phenotype_term_reference_pk PRIMARY KEY (id);
Date: 2024-06-26 20:29:44 Duration: 11s434ms
-
ALTER TABLE pub2.phenotype_term_reference ADD CONSTRAINT phenotype_term_reference_pk PRIMARY KEY (id);
Date: 2024-06-26 20:29:43 Duration: 0ms
22 10 438.17 MiB 8.00 KiB 91.08 MiB 43.82 MiB create unique index chem_disease_reference_ak1 on pub2.chem_disease_reference using btree (chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id);-
CREATE UNIQUE INDEX chem_disease_reference_ak1 ON pub2.chem_disease_reference USING btree (chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id);
Date: 2024-06-26 20:31:37 Duration: 5s915ms
-
CREATE UNIQUE INDEX chem_disease_reference_ak1 ON pub2.chem_disease_reference USING btree (chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id);
Date: 2024-06-26 20:31:37 Duration: 0ms
23 10 6.83 GiB 304.02 MiB 1.00 GiB 699.34 MiB create index ix_gene_disease_ref_mod_tm on pub2.gene_disease_reference using btree (mod_tm);-
CREATE INDEX ix_gene_disease_ref_mod_tm ON pub2.gene_disease_reference USING btree (mod_tm);
Date: 2024-06-26 20:27:12 Duration: 1m22s
-
CREATE INDEX ix_gene_disease_ref_mod_tm ON pub2.gene_disease_reference USING btree (mod_tm);
Date: 2024-06-26 20:27:12 Duration: 0ms
24 10 6.83 GiB 319.92 MiB 1.00 GiB 699.35 MiB create index ix_gene_disease_ref_src_db on pub2.gene_disease_reference using btree (source_acc_db_id);-
CREATE INDEX ix_gene_disease_ref_src_db ON pub2.gene_disease_reference USING btree (source_acc_db_id);
Date: 2024-06-26 20:17:30 Duration: 47s733ms
-
CREATE INDEX ix_gene_disease_ref_src_db ON pub2.gene_disease_reference USING btree (source_acc_db_id);
Date: 2024-06-26 20:17:30 Duration: 0ms
25 10 240.53 MiB 8.00 KiB 49.97 MiB 24.05 MiB alter table pub2.chem_disease_reference add constraint chem_disease_reference_pk primary key (id);-
ALTER TABLE pub2.chem_disease_reference ADD CONSTRAINT chem_disease_reference_pk PRIMARY KEY (id);
Date: 2024-06-26 20:31:32 Duration: 2s255ms
-
ALTER TABLE pub2.chem_disease_reference ADD CONSTRAINT chem_disease_reference_pk PRIMARY KEY (id);
Date: 2024-06-26 20:31:31 Duration: 0ms
26 10 6.83 GiB 313.88 MiB 1.00 GiB 699.35 MiB create index ix_gene_disease_reference_ixn on pub2.gene_disease_reference using btree (ixn_id);-
CREATE INDEX ix_gene_disease_reference_ixn ON pub2.gene_disease_reference USING btree (ixn_id);
Date: 2024-06-26 20:25:50 Duration: 1m21s
-
CREATE INDEX ix_gene_disease_reference_ixn ON pub2.gene_disease_reference USING btree (ixn_id);
Date: 2024-06-26 20:25:49 Duration: 0ms
27 10 6.83 GiB 367.32 MiB 1.00 GiB 699.34 MiB create index ix_gene_disease_ref_dis_gene on pub2.gene_disease_reference using btree (disease_id, gene_id);-
CREATE INDEX ix_gene_disease_ref_dis_gene ON pub2.gene_disease_reference USING btree (disease_id, gene_id);
Date: 2024-06-26 20:24:29 Duration: 1m51s
-
CREATE INDEX ix_gene_disease_ref_dis_gene ON pub2.gene_disease_reference USING btree (disease_id, gene_id);
Date: 2024-06-26 20:24:28 Duration: 0ms
28 10 6.83 GiB 367.42 MiB 1.00 GiB 699.34 MiB create index ix_gene_disease_ref_net_sc on pub2.gene_disease_reference using btree (network_score);-
CREATE INDEX ix_gene_disease_ref_net_sc ON pub2.gene_disease_reference USING btree (network_score);
Date: 2024-06-26 20:29:33 Duration: 2m21s
-
CREATE INDEX ix_gene_disease_ref_net_sc ON pub2.gene_disease_reference USING btree (network_score);
Date: 2024-06-26 20:29:33 Duration: 0ms
29 10 62.61 MiB 8.00 KiB 12.95 MiB 6.26 MiB alter table pub2.phenotype_term add constraint phenotype_term_pk primary key (phenotype_id, term_id);-
ALTER TABLE pub2.phenotype_term ADD CONSTRAINT phenotype_term_pk PRIMARY KEY (phenotype_id, term_id);
Date: 2024-06-26 23:01:50 Duration: 0ms
30 10 6.83 GiB 330.84 MiB 1.00 GiB 699.34 MiB create index ix_gene_disease_ref_reference on pub2.gene_disease_reference using btree (reference_id);-
CREATE INDEX ix_gene_disease_ref_reference ON pub2.gene_disease_reference USING btree (reference_id);
Date: 2024-06-26 20:22:37 Duration: 1m19s
-
CREATE INDEX ix_gene_disease_ref_reference ON pub2.gene_disease_reference USING btree (reference_id);
Date: 2024-06-26 20:22:37 Duration: 0ms
31 10 6.83 GiB 132.22 MiB 1.00 GiB 699.35 MiB create index ix_gene_disease_ref_source_cd on pub2.gene_disease_reference using btree (source_cd);-
CREATE INDEX ix_gene_disease_ref_source_cd ON pub2.gene_disease_reference USING btree (source_cd);
Date: 2024-06-26 20:18:29 Duration: 59s168ms
-
CREATE INDEX ix_gene_disease_ref_source_cd ON pub2.gene_disease_reference USING btree (source_cd);
Date: 2024-06-26 20:18:29 Duration: 0ms
32 8 63.37 MiB 8.00 KiB 16.24 MiB 7.92 MiB alter table pub2.chem_disease add constraint chem_disease_pk primary key (chem_id, disease_id);-
ALTER TABLE pub2.chem_disease ADD CONSTRAINT chem_disease_pk PRIMARY KEY (chem_id, disease_id);
Date: 2024-06-26 23:01:54 Duration: 0ms
33 8 7.85 GiB 873.29 MiB 1.00 GiB 1005.16 MiB select pub2.maint_cached_value_refresh_data_metrics ();-
select pub2.maint_cached_value_refresh_data_metrics ();
Date: 2024-06-27 05:46:19 Duration: 33m32s
-
select pub2.maint_cached_value_refresh_data_metrics ();
Date: 2024-06-27 05:42:08 Duration: 0ms
34 6 5.10 GiB 105.82 MiB 1.00 GiB 870.97 MiB select distinct ptr.phenotype_id, cdr.disease_id, ( select id from pub2.object_type where cd = ?), cdr.reference_id, ptr.reference_id, cdr.ixn_id, cdr.chem_id, ( select id from pub2.object_type where cd = ?), cdr.mod_tm from pub2.chem_disease_reference cdr, pub2.phenotype_term_reference ptr where cdr.chem_id = ptr.term_id;-
SELECT DISTINCT ptr.phenotype_id, cdr.disease_id, ( select id from pub2.OBJECT_TYPE where cd = 'disease'), cdr.reference_id, ptr.reference_id, cdr.ixn_id, cdr.chem_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), cdr.mod_tm FROM pub2.CHEM_DISEASE_REFERENCE cdr, pub2.PHENOTYPE_TERM_REFERENCE ptr WHERE cdr.chem_id = ptr.term_id;
Date: 2024-06-26 20:04:03 Duration: 0ms
35 5 1005.73 MiB 196.52 MiB 207.76 MiB 201.15 MiB create index ix_phenotype_term_reference_ixn_id on pub2.phenotype_term_reference using btree (ixn_id);-
CREATE INDEX ix_phenotype_term_reference_ixn_id ON pub2.phenotype_term_reference USING btree (ixn_id);
Date: 2024-06-26 20:31:05 Duration: 10s291ms
-
CREATE INDEX ix_phenotype_term_reference_ixn_id ON pub2.phenotype_term_reference USING btree (ixn_id);
Date: 2024-06-26 20:31:05 Duration: 0ms
36 5 1005.74 MiB 197.41 MiB 212.16 MiB 201.15 MiB create index ix_phenotype_term_ref_reference_id on pub2.phenotype_term_reference using btree (reference_id);-
CREATE INDEX ix_phenotype_term_ref_reference_id ON pub2.phenotype_term_reference USING btree (reference_id);
Date: 2024-06-26 20:30:22 Duration: 10s635ms
-
CREATE INDEX ix_phenotype_term_ref_reference_id ON pub2.phenotype_term_reference USING btree (reference_id);
Date: 2024-06-26 20:30:22 Duration: 0ms
37 5 156.30 MiB 29.64 MiB 32.03 MiB 31.26 MiB create index ix_term_enrich_enr_obj_type on pub2.term_enrichment using btree (enriched_object_type_id);-
CREATE INDEX ix_term_enrich_enr_obj_type ON pub2.term_enrichment USING btree (enriched_object_type_id);
Date: 2024-06-26 22:30:32 Duration: 1s150ms
-
CREATE INDEX ix_term_enrich_enr_obj_type ON pub2.term_enrichment USING btree (enriched_object_type_id);
Date: 2024-06-26 22:30:32 Duration: 0ms
38 5 1.38 GiB 265.90 MiB 292.72 MiB 282.28 MiB create index ix_phenotype_term_ref_ids on pub2.phenotype_term_reference using btree (phenotype_id, term_id, via_term_object_type_id, term_object_type_id);-
CREATE INDEX ix_phenotype_term_ref_ids ON pub2.phenotype_term_reference USING btree (phenotype_id, term_id, via_term_object_type_id, term_object_type_id);
Date: 2024-06-26 20:31:29 Duration: 14s20ms
-
CREATE INDEX ix_phenotype_term_ref_ids ON pub2.phenotype_term_reference USING btree (phenotype_id, term_id, via_term_object_type_id, term_object_type_id);
Date: 2024-06-26 20:31:29 Duration: 0ms
39 5 62.56 MiB 9.87 MiB 13.33 MiB 12.51 MiB create index ix_phenotype_term_phenotype_id on pub2.phenotype_term using btree (phenotype_id);-
CREATE INDEX ix_phenotype_term_phenotype_id ON pub2.phenotype_term USING btree (phenotype_id);
Date: 2024-06-26 23:01:51 Duration: 0ms
40 5 240.49 MiB 47.08 MiB 49.23 MiB 48.10 MiB create index ix_chem_disease_reference_ref on pub2.chem_disease_reference using btree (reference_id);-
CREATE INDEX ix_chem_disease_reference_ref ON pub2.chem_disease_reference USING btree (reference_id);
Date: 2024-06-26 20:31:43 Duration: 2s753ms
-
CREATE INDEX ix_chem_disease_reference_ref ON pub2.chem_disease_reference USING btree (reference_id);
Date: 2024-06-26 20:31:43 Duration: 0ms
41 5 680.00 KiB 128.00 KiB 144.00 KiB 136.00 KiB create index ix_gene_disease_cur_ref_qty on pub2.gene_disease using btree (curated_reference_qty) where (curated_reference_qty > ?);-
CREATE INDEX ix_gene_disease_cur_ref_qty ON pub2.gene_disease USING btree (curated_reference_qty) WHERE (curated_reference_qty > 0);
Date: 2024-06-26 23:01:13 Duration: 0ms Database: ctdprd51 User: pub2
42 5 1005.75 MiB 193.28 MiB 204.89 MiB 201.15 MiB create index ix_phenotype_term_ref_taxon_id on pub2.phenotype_term_reference using btree (taxon_id);-
CREATE INDEX ix_phenotype_term_ref_taxon_id ON pub2.phenotype_term_reference USING btree (taxon_id);
Date: 2024-06-26 20:30:29 Duration: 7s98ms
-
CREATE INDEX ix_phenotype_term_ref_taxon_id ON pub2.phenotype_term_reference USING btree (taxon_id);
Date: 2024-06-26 20:30:29 Duration: 0ms
43 5 1005.75 MiB 194.11 MiB 211.54 MiB 201.15 MiB create index ix_phenotype_term_ref_term_id on pub2.phenotype_term_reference using btree (term_id);-
CREATE INDEX ix_phenotype_term_ref_term_id ON pub2.phenotype_term_reference USING btree (term_id);
Date: 2024-06-26 20:30:03 Duration: 9s516ms
-
CREATE INDEX ix_phenotype_term_ref_term_id ON pub2.phenotype_term_reference USING btree (term_id);
Date: 2024-06-26 20:30:03 Duration: 0ms
44 5 1005.74 MiB 190.27 MiB 209.54 MiB 201.15 MiB create index ixn_phenotype_term_ref_phenotype_id on pub2.phenotype_term_reference using btree (phenotype_id);-
CREATE INDEX ixn_phenotype_term_ref_phenotype_id ON pub2.phenotype_term_reference USING btree (phenotype_id);
Date: 2024-06-26 20:29:53 Duration: 8s700ms
-
CREATE INDEX ixn_phenotype_term_ref_phenotype_id ON pub2.phenotype_term_reference USING btree (phenotype_id);
Date: 2024-06-26 20:29:53 Duration: 0ms
45 5 40.00 KiB 8.00 KiB 8.00 KiB 8.00 KiB create index ix_gene_disease_exp_ref_qty on pub2.gene_disease using btree (exposure_reference_qty) where (exposure_reference_qty > ?);-
CREATE INDEX ix_gene_disease_exp_ref_qty ON pub2.gene_disease USING btree (exposure_reference_qty) WHERE (exposure_reference_qty > 0);
Date: 2024-06-26 23:01:21 Duration: 0ms
46 5 240.49 MiB 45.41 MiB 50.25 MiB 48.10 MiB create index ix_chem_disease_ref_mod_tm on pub2.chem_disease_reference using btree (mod_tm);-
CREATE INDEX ix_chem_disease_ref_mod_tm ON pub2.chem_disease_reference USING btree (mod_tm);
Date: 2024-06-26 20:31:55 Duration: 2s796ms
-
CREATE INDEX ix_chem_disease_ref_mod_tm ON pub2.chem_disease_reference USING btree (mod_tm);
Date: 2024-06-26 20:31:55 Duration: 0ms
47 5 627.48 MiB 124.82 MiB 126.06 MiB 125.50 MiB create index ix_gene_disease_ind_chem_qty on pub2.gene_disease using btree (indirect_chem_qty) where (indirect_chem_qty > ?);-
CREATE INDEX ix_gene_disease_ind_chem_qty ON pub2.gene_disease USING btree (indirect_chem_qty) WHERE (indirect_chem_qty > 0);
Date: 2024-06-26 23:01:21 Duration: 7s195ms
-
CREATE INDEX ix_gene_disease_ind_chem_qty ON pub2.gene_disease USING btree (indirect_chem_qty) WHERE (indirect_chem_qty > 0);
Date: 2024-06-26 23:01:21 Duration: 0ms
48 5 156.30 MiB 27.14 MiB 34.73 MiB 31.26 MiB create index ix_term_enrich_tgt_match on pub2.term_enrichment using btree (target_match_qty);-
CREATE INDEX ix_term_enrich_tgt_match ON pub2.term_enrichment USING btree (target_match_qty);
Date: 2024-06-26 22:30:30 Duration: 1s958ms
-
CREATE INDEX ix_term_enrich_tgt_match ON pub2.term_enrichment USING btree (target_match_qty);
Date: 2024-06-26 22:30:30 Duration: 0ms
49 5 1005.75 MiB 197.69 MiB 204.06 MiB 201.15 MiB create index ix_phenotype_term_ref_evidence_cd on pub2.phenotype_term_reference using btree (evidence_cd);-
CREATE INDEX ix_phenotype_term_ref_evidence_cd ON pub2.phenotype_term_reference USING btree (evidence_cd);
Date: 2024-06-26 20:30:36 Duration: 7s621ms
-
CREATE INDEX ix_phenotype_term_ref_evidence_cd ON pub2.phenotype_term_reference USING btree (evidence_cd);
Date: 2024-06-26 20:30:36 Duration: 0ms
50 5 627.62 MiB 115.67 MiB 130.75 MiB 125.53 MiB create index ix_gene_disease_network_score on pub2.gene_disease using btree (network_score);-
CREATE INDEX ix_gene_disease_network_score ON pub2.gene_disease USING btree (network_score);
Date: 2024-06-26 23:01:42 Duration: 14s829ms
-
CREATE INDEX ix_gene_disease_network_score ON pub2.gene_disease USING btree (network_score);
Date: 2024-06-26 23:01:42 Duration: 0ms
51 5 218.24 MiB 39.75 MiB 45.38 MiB 43.65 MiB create index ix_term_enrich_corr_p_val on pub2.term_enrichment using btree (corrected_p_val);-
CREATE INDEX ix_term_enrich_corr_p_val ON pub2.term_enrichment USING btree (corrected_p_val);
Date: 2024-06-26 22:30:36 Duration: 4s566ms
-
CREATE INDEX ix_term_enrich_corr_p_val ON pub2.term_enrichment USING btree (corrected_p_val);
Date: 2024-06-26 22:30:36 Duration: 0ms
52 5 62.57 MiB 11.10 MiB 13.95 MiB 12.51 MiB create index ix_phenotype_term_term_id on pub2.phenotype_term using btree (term_id);-
CREATE INDEX ix_phenotype_term_term_id ON pub2.phenotype_term USING btree (term_id);
Date: 2024-06-26 23:01:51 Duration: 0ms
53 5 627.62 MiB 113.69 MiB 130.48 MiB 125.53 MiB create index ix_gene_disease_disease on pub2.gene_disease using btree (disease_id);-
CREATE INDEX ix_gene_disease_disease ON pub2.gene_disease USING btree (disease_id);
Date: 2024-06-26 23:01:49 Duration: 7s143ms
-
CREATE INDEX ix_gene_disease_disease ON pub2.gene_disease USING btree (disease_id);
Date: 2024-06-26 23:01:49 Duration: 0ms
54 5 240.49 MiB 45.73 MiB 50.16 MiB 48.10 MiB create index ix_chem_disease_ref_src_db on pub2.chem_disease_reference using btree (source_acc_db_id);-
CREATE INDEX ix_chem_disease_ref_src_db ON pub2.chem_disease_reference USING btree (source_acc_db_id);
Date: 2024-06-26 20:31:47 Duration: 1s847ms
-
CREATE INDEX ix_chem_disease_ref_src_db ON pub2.chem_disease_reference USING btree (source_acc_db_id);
Date: 2024-06-26 20:31:47 Duration: 0ms
55 5 218.23 MiB 42.92 MiB 44.62 MiB 43.65 MiB create index ix_term_enrich_raw_p_val on pub2.term_enrichment using btree (raw_p_val);-
CREATE INDEX ix_term_enrich_raw_p_val ON pub2.term_enrichment USING btree (raw_p_val);
Date: 2024-06-26 22:30:41 Duration: 4s766ms
-
CREATE INDEX ix_term_enrich_raw_p_val ON pub2.term_enrichment USING btree (raw_p_val);
Date: 2024-06-26 22:30:41 Duration: 0ms
56 5 240.49 MiB 45.03 MiB 50.98 MiB 48.10 MiB create index ix_chem_disease_reference_dis on pub2.chem_disease_reference using btree (disease_id);-
CREATE INDEX ix_chem_disease_reference_dis ON pub2.chem_disease_reference USING btree (disease_id);
Date: 2024-06-26 20:31:40 Duration: 2s778ms
-
CREATE INDEX ix_chem_disease_reference_dis ON pub2.chem_disease_reference USING btree (disease_id);
Date: 2024-06-26 20:31:40 Duration: 0ms
57 5 240.49 MiB 45.62 MiB 49.58 MiB 48.10 MiB create index ix_chem_disease_ref_net_sc on pub2.chem_disease_reference using btree (network_score);-
CREATE INDEX ix_chem_disease_ref_net_sc ON pub2.chem_disease_reference USING btree (network_score);
Date: 2024-06-26 20:32:00 Duration: 4s889ms
-
CREATE INDEX ix_chem_disease_ref_net_sc ON pub2.chem_disease_reference USING btree (network_score);
Date: 2024-06-26 20:32:00 Duration: 0ms
58 5 1005.75 MiB 194.65 MiB 218.25 MiB 201.15 MiB create index ix_phenotype_term_ref_object_type_id on pub2.phenotype_term_reference using btree (term_object_type_id);-
CREATE INDEX ix_phenotype_term_ref_object_type_id ON pub2.phenotype_term_reference USING btree (term_object_type_id);
Date: 2024-06-26 20:30:11 Duration: 8s344ms
-
CREATE INDEX ix_phenotype_term_ref_object_type_id ON pub2.phenotype_term_reference USING btree (term_object_type_id);
Date: 2024-06-26 20:30:11 Duration: 0ms
59 5 1005.74 MiB 194.09 MiB 207.18 MiB 201.15 MiB create index ix_phenotype_term_reference_term_reference_id on pub2.phenotype_term_reference using btree (term_reference_id);-
CREATE INDEX ix_phenotype_term_reference_term_reference_id ON pub2.phenotype_term_reference USING btree (term_reference_id);
Date: 2024-06-26 20:30:54 Duration: 10s497ms
-
CREATE INDEX ix_phenotype_term_reference_term_reference_id ON pub2.phenotype_term_reference USING btree (term_reference_id);
Date: 2024-06-26 20:30:54 Duration: 0ms
60 5 240.48 MiB 47.47 MiB 48.68 MiB 48.10 MiB create index ix_chem_disease_reference_gene on pub2.chem_disease_reference using btree (via_gene_id);-
CREATE INDEX ix_chem_disease_reference_gene ON pub2.chem_disease_reference USING btree (via_gene_id);
Date: 2024-06-26 20:31:49 Duration: 2s710ms
-
CREATE INDEX ix_chem_disease_reference_gene ON pub2.chem_disease_reference USING btree (via_gene_id);
Date: 2024-06-26 20:31:49 Duration: 0ms
61 5 156.30 MiB 29.59 MiB 32.38 MiB 31.26 MiB create index ix_term_enrich_obj_type on pub2.term_enrichment using btree (object_type_id);-
CREATE INDEX ix_term_enrich_obj_type ON pub2.term_enrichment USING btree (object_type_id);
Date: 2024-06-26 22:30:28 Duration: 1s677ms
-
CREATE INDEX ix_term_enrich_obj_type ON pub2.term_enrichment USING btree (object_type_id);
Date: 2024-06-26 22:30:28 Duration: 0ms Database: ctdprd51 User: pub2
62 5 1005.75 MiB 189.98 MiB 208.94 MiB 201.15 MiB create index ix_phenotype_term_ref_via_term_id on pub2.phenotype_term_reference using btree (via_term_id);-
CREATE INDEX ix_phenotype_term_ref_via_term_id ON pub2.phenotype_term_reference USING btree (via_term_id);
Date: 2024-06-26 20:31:15 Duration: 10s557ms
-
CREATE INDEX ix_phenotype_term_ref_via_term_id ON pub2.phenotype_term_reference USING btree (via_term_id);
Date: 2024-06-26 20:31:15 Duration: 0ms
63 5 240.49 MiB 46.87 MiB 48.94 MiB 48.10 MiB create index ix_chem_disease_ref_source_cd on pub2.chem_disease_reference using btree (source_cd);-
CREATE INDEX ix_chem_disease_ref_source_cd ON pub2.chem_disease_reference USING btree (source_cd);
Date: 2024-06-26 20:31:45 Duration: 1s913ms
-
CREATE INDEX ix_chem_disease_ref_source_cd ON pub2.chem_disease_reference USING btree (source_cd);
Date: 2024-06-26 20:31:45 Duration: 0ms
64 5 240.49 MiB 45.87 MiB 49.31 MiB 48.10 MiB create index ix_chem_disease_reference_ixn on pub2.chem_disease_reference using btree (ixn_id);-
CREATE INDEX ix_chem_disease_reference_ixn ON pub2.chem_disease_reference USING btree (ixn_id);
Date: 2024-06-26 20:31:52 Duration: 2s862ms
-
CREATE INDEX ix_chem_disease_reference_ixn ON pub2.chem_disease_reference USING btree (ixn_id);
Date: 2024-06-26 20:31:52 Duration: 0ms
65 5 1005.75 MiB 197.88 MiB 204.42 MiB 201.15 MiB create index ix_phenotype_term_reference_source_acc_db_id on pub2.phenotype_term_reference using btree (source_acc_db_id);-
CREATE INDEX ix_phenotype_term_reference_source_acc_db_id ON pub2.phenotype_term_reference USING btree (source_acc_db_id);
Date: 2024-06-26 20:30:44 Duration: 7s440ms
-
CREATE INDEX ix_phenotype_term_reference_source_acc_db_id ON pub2.phenotype_term_reference USING btree (source_acc_db_id);
Date: 2024-06-26 20:30:44 Duration: 0ms
66 4 32.00 KiB 8.00 KiB 8.00 KiB 8.00 KiB create index ix_chem_disease_exp_ref_qty on pub2.chem_disease using btree (exposure_reference_qty) where (exposure_reference_qty > ?);-
CREATE INDEX ix_chem_disease_exp_ref_qty ON pub2.chem_disease USING btree (exposure_reference_qty) WHERE (exposure_reference_qty > 0);
Date: 2024-06-26 23:01:53 Duration: 0ms
67 4 13.12 MiB 8.00 KiB 6.70 MiB 3.28 MiB alter table pub2.phenotype_term_axn add constraint phenotype_term_axn_pk primary key (phenotype_id, term_id, action_type_nm, action_degree_type_nm);-
ALTER TABLE pub2.phenotype_term_axn ADD CONSTRAINT phenotype_term_axn_pk PRIMARY KEY (phenotype_id, term_id, action_type_nm, action_degree_type_nm);
Date: 2024-06-26 23:01:52 Duration: 0ms
68 4 63.33 MiB 13.05 MiB 18.40 MiB 15.83 MiB create index ix_chem_disease_network_score on pub2.chem_disease using btree (network_score);-
CREATE INDEX ix_chem_disease_network_score ON pub2.chem_disease USING btree (network_score);
Date: 2024-06-26 23:01:56 Duration: 1s503ms
-
CREATE INDEX ix_chem_disease_network_score ON pub2.chem_disease USING btree (network_score);
Date: 2024-06-26 23:01:56 Duration: 0ms
69 4 62.45 MiB 15.37 MiB 15.95 MiB 15.61 MiB create index ix_chem_disease_ind_gene_qty on pub2.chem_disease using btree (indirect_gene_qty) where (indirect_gene_qty > ?);-
CREATE INDEX ix_chem_disease_ind_gene_qty ON pub2.chem_disease USING btree (indirect_gene_qty) WHERE (indirect_gene_qty > 0);
Date: 2024-06-26 23:01:53 Duration: 0ms
70 4 1.98 MiB 480.00 KiB 528.00 KiB 506.00 KiB create index ix_chem_disease_cur_ref_qty on pub2.chem_disease using btree (curated_reference_qty) where (curated_reference_qty > ?);-
CREATE INDEX ix_chem_disease_cur_ref_qty ON pub2.chem_disease USING btree (curated_reference_qty) WHERE (curated_reference_qty > 0);
Date: 2024-06-26 23:01:53 Duration: 0ms
71 4 63.33 MiB 14.21 MiB 16.46 MiB 15.83 MiB create index ix_chem_disease_disease on pub2.chem_disease using btree (disease_id);-
CREATE INDEX ix_chem_disease_disease ON pub2.chem_disease USING btree (disease_id);
Date: 2024-06-26 23:01:56 Duration: 0ms
72 2 5.95 MiB 2.43 MiB 3.52 MiB 2.97 MiB create index ix_phenotype_term_axn_term_id on pub2.phenotype_term_axn using btree (term_id);-
CREATE INDEX ix_phenotype_term_axn_term_id ON pub2.phenotype_term_axn USING btree (term_id);
Date: 2024-06-26 23:01:52 Duration: 0ms
73 2 5.95 MiB 2.45 MiB 3.50 MiB 2.97 MiB create index ix_phenotype_term_axn_phenotype_id on pub2.phenotype_term_axn using btree (phenotype_id);-
CREATE INDEX ix_phenotype_term_axn_phenotype_id ON pub2.phenotype_term_axn USING btree (phenotype_id);
Date: 2024-06-26 23:01:52 Duration: 0ms
Queries generating the largest temporary files
Rank Size Query 1 1.00 GiB SELECT * FROM pgbulkload.pg_bulkload ($1);[ Date: 2024-06-25 17:23:01 - Database: ctdprd51 - User: load - Application: pg_bulkload ]
2 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-06-26 18:39:38 ]
3 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-06-26 18:39:38 ]
4 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-06-26 18:39:38 ]
5 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-06-26 18:39:38 ]
6 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-06-26 18:39:38 ]
7 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-06-26 18:39:38 ]
8 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-06-26 18:39:38 ]
9 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-06-26 18:39:38 ]
10 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-06-26 18:39:38 ]
11 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-06-26 18:39:39 ]
12 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-06-26 18:39:39 ]
13 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-06-26 18:39:39 ]
14 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-06-26 18:39:39 ]
15 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-06-26 18:39:39 ]
16 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-06-26 18:39:39 ]
17 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-06-26 18:39:39 ]
18 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-06-26 18:39:39 ]
19 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-06-26 18:39:39 ]
20 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-06-26 18:39:39 ]
-
Vacuums
Vacuums / Analyzes Distribution
Key values
- 251.32 sec Highest CPU-cost vacuum
Table pub2.gene_disease
Database ctdprd51 - 2024-06-26 23:35:40 Date
- 0 sec Highest CPU-cost analyze
Table
Database ctdprd51 - Date
Average Autovacuum Duration
Key values
- 251.32 sec Highest CPU-cost vacuum
Table pub2.gene_disease
Database ctdprd51 - 2024-06-26 23:35:40 Date
Analyzes per table
Key values
- pubc.log_query (185) Main table analyzed (database ctdprd51)
- 312 analyzes Total
Table Number of analyzes ctdprd51.pubc.log_query 185 ctdprd51.pub1.term_comp_agent 10 ctdprd51.pub2.term_set_enrichment_agent 8 ctdprd51.pub2.term_set_enrichment 7 ctdprd51.pg_catalog.pg_class 5 ctdprd51.pub2.term 4 ctdprd51.pub2.reference 3 ctdprd51.pub1.term_set_enrichment_agent 3 ctdprd51.pg_catalog.pg_attribute 3 ctdprd51.edit.db_link 2 ctdprd51.pub2.phenotype_term 2 ctdprd51.pub2.dag_node 2 ctdprd51.pg_catalog.pg_shdepend 2 ctdprd51.pub2.db 2 ctdprd51.pg_catalog.pg_type 2 ctdprd51.pub2.term_comp_agent 2 ctdprd51.pg_catalog.pg_depend 2 ctdprd51.pg_catalog.pg_index 2 ctdprd51.pub1.term_set_enrichment 2 ctdprd51.pub2.gene_gene 1 ctdprd51.pg_catalog.pg_constraint 1 ctdprd51.pub2.exp_receptor_gender 1 ctdprd51.pub2.img 1 ctdprd51.pub2.action_type 1 ctdprd51.pub2.gene_gene_ref_throughput 1 ctdprd51.pub2.gene_disease 1 ctdprd51.pub2.db_report_site 1 ctdprd51.pub2.gene_gene_reference 1 ctdprd51.pub2.exp_stressor_stressor_src 1 ctdprd51.pub2.reference_party_role 1 ctdprd51.pub2.term_label 1 ctdprd51.pub2.exposure 1 ctdprd51.edit.country 1 ctdprd51.edit.action_degree 1 ctdprd51.edit.tm_reference 1 ctdprd51.pub2.gene_chem_ref_gene_form 1 ctdprd51.pg_catalog.pg_trigger 1 ctdprd51.edit.actor_form_type 1 ctdprd51.pub2.gene_go_annot 1 ctdprd51.pub2.exp_receptor_race 1 ctdprd51.pub2.slim_term_mapping 1 ctdprd51.pub2.exp_outcome 1 ctdprd51.pub2.exp_event_location 1 ctdprd51.pub2.dag_edge 1 ctdprd51.pub2.exp_receptor_tobacco_use 1 ctdprd51.pg_catalog.pg_description 1 ctdprd51.pub2.exp_event 1 ctdprd51.pub1.term_comp 1 ctdprd51.pub2.exp_event_project 1 ctdprd51.edit.receptor 1 ctdprd51.pub2.reference_exp 1 ctdprd51.pub2.exp_stressor 1 ctdprd51.pub2.term_comp 1 ctdprd51.edit.action_type 1 ctdprd51.pub2.gene_taxon 1 ctdprd51.pub2.term_reference 1 ctdprd51.pub2.ixn 1 ctdprd51.edit.tm_reference_term 1 ctdprd51.pub2.exp_receptor 1 ctdprd51.pg_catalog.pg_attrdef 1 postgres.pg_catalog.pg_shdepend 1 ctdprd51.pub2.db_report 1 ctdprd51.pub2.reference_party 1 ctdprd51.pub2.exp_study_factor 1 ctdprd51.pub2.db_link 1 ctdprd51.edit.object_note 1 ctdprd51.pub2.chem_disease 1 ctdprd51.edit.db 1 ctdprd51.pub2.exp_anatomy 1 ctdprd51.pub2.country 1 ctdprd51.edit.race 1 ctdprd51.edit.list_db_report 1 ctdprd51.pub2.term_pathway 1 ctdprd51.edit.db_report_site 1 ctdprd51.edit.action_type_path 1 ctdprd51.pub2.medium 1 ctdprd51.edit.evidence 1 ctdprd51.pub2.geographic_region 1 ctdprd51.load.data_load 1 ctdprd51.edit.reference_db_link 1 ctdprd51.edit.db_report 1 ctdprd51.pub2.exp_event_assay_method 1 ctdprd51.pub2.list_db_report 1 Total 312 Vacuums per table
Key values
- pubc.log_query (93) Main table vacuumed on database ctdprd51
- 192 vacuums Total
Index Buffer usage Skipped WAL usage Table Vacuums scans hits misses dirtied pins frozen records full page bytes ctdprd51.pubc.log_query 93 32 80,096 0 5,518 0 2,175 9,578 1,385 7,039,270 ctdprd51.pg_catalog.pg_statistic 7 7 4,430 0 862 0 125 2,470 719 3,335,109 ctdprd51.pub1.term_comp_agent 6 0 6,288 0 594 0 0 2,877 9 227,740 ctdprd51.pub2.term_set_enrichment_agent 5 0 93,243 0 11,075 0 0 33,372 5 2,007,926 ctdprd51.pg_toast.pg_toast_2619 4 4 16,045 0 5,215 0 40,865 12,290 3,691 1,967,585 ctdprd51.pub2.term 4 2 1,518,810 0 203,335 0 34 886,913 355,893 1,584,313,368 ctdprd51.pub2.term_set_enrichment 4 0 2,442 0 416 0 0 739 6 84,320 ctdprd51.pub2.reference 3 2 659,485 0 74,242 0 0 413,055 51,218 230,115,322 ctdprd51.pg_catalog.pg_class 3 3 923 0 146 0 0 517 134 633,202 ctdprd51.pub2.dag_node 2 1 400,121 0 603 0 0 313,317 592 94,155,293 ctdprd51.pub2.phenotype_term 2 2 936,071 0 96,655 0 0 751,825 119,901 292,723,609 ctdprd51.pg_catalog.pg_attribute 2 2 1,339 0 198 0 74 660 165 701,252 postgres.pg_catalog.pg_shdepend 2 2 371 0 48 0 0 167 37 145,023 ctdprd51.pg_toast.pg_toast_486223 2 0 77 0 3 0 0 2 0 376 ctdprd51.pg_catalog.pg_constraint 1 1 289 0 13 0 0 118 15 68,975 ctdprd51.pub2.gene_gene 1 0 11,881 0 5 0 0 5,889 2 361,410 ctdprd51.pub2.exp_receptor_gender 1 0 2,662 0 3 0 0 1,316 1 86,063 ctdprd51.edit.db_link 1 0 7,439 0 3 0 0 3,590 1 220,205 ctdprd51.pub2.img 1 0 1,108 0 5 0 0 524 2 46,359 ctdprd51.pub2.gene_gene_ref_throughput 1 0 14,322 0 4 0 0 7,138 2 435,061 ctdprd51.pub2.gene_disease 1 1 2,803,701 0 775,294 0 0 1,587,205 726,432 2,020,047,527 ctdprd51.pub2.gene_gene_reference 1 0 29,916 0 3 0 0 14,882 1 886,457 ctdprd51.edit.geographic_region 1 0 64 0 5 0 0 3 2 15,497 ctdprd51.pub2.exp_stressor_stressor_src 1 0 2,567 0 4 0 0 1,255 1 82,464 ctdprd51.edit.exp_outcome 1 1 602 0 108 0 0 138 70 479,921 ctdprd51.pub2.reference_party_role 1 0 13,299 0 5 0 0 6,596 2 402,407 ctdprd51.pub2.term_label 1 0 178,507 0 17,037 0 0 89,186 4 5,290,283 ctdprd51.pub2.exposure 1 0 3,631 0 3 0 0 1,762 1 112,377 ctdprd51.pub2.db 1 1 112 0 15 0 0 17 9 28,181 ctdprd51.pg_toast.pg_toast_5519522 1 0 86,889 0 4 0 0 43,437 2 2,579,306 ctdprd51.pub2.gene_chem_ref_gene_form 1 0 31,821 0 3 0 0 15,862 2 950,049 ctdprd51.pg_catalog.pg_trigger 1 1 332 0 25 0 0 139 32 173,834 ctdprd51.pub2.gene_go_annot 1 0 510,867 0 255,336 0 0 255,325 10 15,145,194 ctdprd51.pub2.exp_event_location 1 0 3,402 0 3 0 0 1,650 1 105,769 ctdprd51.pub2.dag_edge 1 0 1,053 0 5 0 0 482 2 42,145 ctdprd51.pub2.exp_receptor_race 1 0 1,313 0 3 0 0 621 1 45,058 ctdprd51.pub2.exp_outcome 1 0 572 0 4 0 0 228 2 26,703 ctdprd51.pub2.slim_term_mapping 1 0 600 0 4 0 0 262 2 27,525 ctdprd51.pub2.exp_receptor_tobacco_use 1 0 1,187 0 3 0 0 558 1 41,341 ctdprd51.pub1.term_set_enrichment_agent 1 0 325,059 0 151,776 0 0 162,410 7 9,635,242 ctdprd51.pg_catalog.pg_description 1 1 234 0 32 0 42 115 24 90,337 ctdprd51.pub2.exp_event 1 0 12,344 0 3 0 0 6,078 1 367,021 ctdprd51.pg_catalog.pg_type 1 1 149 0 16 0 0 71 15 67,410 ctdprd51.pub2.exp_event_project 1 0 2,016 0 3 0 0 986 1 66,593 ctdprd51.pub2.reference_exp 1 0 326 0 4 0 0 126 2 21,353 ctdprd51.pub2.exp_stressor 1 0 5,993 0 4 0 0 2,967 2 187,812 ctdprd51.edit.action_type 1 0 174 0 5 0 0 6 2 15,095 ctdprd51.pub2.term_reference 1 0 36,425 0 5 0 0 18,158 2 1,083,237 ctdprd51.pg_toast.pg_toast_5519585 1 0 18,936 0 2,066 0 0 9,442 2 571,973 ctdprd51.pub2.gene_taxon 1 0 135,736 0 5 0 0 67,811 3 4,025,662 ctdprd51.pub2.exp_receptor 1 0 7,254 0 3 0 0 3,598 1 220,701 ctdprd51.pub2.ixn 1 1 1,439,739 0 88 0 0 960,252 45,896 232,548,836 ctdprd51.pub2.term_comp_agent 1 0 176 0 3 0 0 1 1 3,929 ctdprd51.pg_catalog.pg_depend 1 1 628 0 75 0 65 299 83 364,308 ctdprd51.pub2.reference_party 1 0 5,063 0 4 0 0 2,498 2 162,693 ctdprd51.pub2.exp_study_factor 1 0 113 0 15 0 0 11 2 13,408 ctdprd51.pub2.db_link 1 0 230,994 0 84,664 0 0 115,336 5 6,845,542 ctdprd51.edit.object_note 1 1 168 0 2 0 0 12 2 17,673 ctdprd51.pub2.chem_disease 1 1 262,030 0 9,557 0 0 160,153 9,546 115,839,310 ctdprd51.pub1.term_set_enrichment 1 0 3,921 0 3,256 0 0 3,535 2 220,632 ctdprd51.pg_toast.pg_toast_5519453 1 1 90 0 3 0 0 49 10 11,937 ctdprd51.pg_catalog.pg_index 1 1 178 0 21 0 0 106 17 89,548 ctdprd51.pub2.exp_anatomy 1 0 160 0 3 0 0 34 1 10,425 ctdprd51.pub2.term_pathway 1 0 3,336 0 4 0 0 1,614 2 107,141 ctdprd51.edit.race 1 0 90 0 5 0 0 3 2 13,827 ctdprd51.edit.reference_db_link 1 0 6,983 0 225 1 0 3,589 1 220,077 ctdprd51.pub2.exp_event_assay_method 1 0 4,745 0 3 0 0 2,344 1 146,715 Total 192 70 9,930,937 177,245 1,698,657 1 43,380 5,987,569 1,315,990 4,638,117,943 Tuples removed per table
Key values
- pub2.gene_disease (32839894) Main table with removed tuples on database ctdprd51
- 59826625 tuples Total removed
Index Tuples Pages Table Vacuums scans removed remain not yet removable removed remain ctdprd51.pub2.gene_disease 1 1 32,839,894 32,839,894 0 0 482,940 ctdprd51.pub2.phenotype_term 2 2 19,663,134 6,545,820 0 0 244,944 ctdprd51.pub2.chem_disease 1 1 3,313,187 3,313,187 0 0 48,674 ctdprd51.pub2.term 4 2 2,093,428 6,312,059 0 0 392,143 ctdprd51.pub2.dag_node 2 1 1,711,272 3,407,982 0 0 123,234 ctdprd51.pub2.reference 3 2 93,859 589,832 0 0 200,226 ctdprd51.pub2.ixn 1 1 53,468 2,233,611 0 0 527,108 ctdprd51.pubc.log_query 93 32 32,901 829,226 656,335 0 34,071 ctdprd51.pg_toast.pg_toast_2619 4 4 14,346 79,634 623 0 50,368 ctdprd51.pg_catalog.pg_statistic 7 7 2,729 15,114 172 0 2,030 ctdprd51.pg_catalog.pg_depend 1 1 2,391 13,724 0 0 145 ctdprd51.pg_catalog.pg_attribute 2 2 2,094 17,568 0 0 474 ctdprd51.pg_catalog.pg_description 1 1 1,038 5,341 0 0 89 postgres.pg_catalog.pg_shdepend 2 2 775 3,869 0 0 42 ctdprd51.pg_catalog.pg_class 3 3 514 5,343 0 0 183 ctdprd51.pg_catalog.pg_trigger 1 1 468 1,797 0 0 50 ctdprd51.pg_catalog.pg_index 1 1 335 1,162 0 0 41 ctdprd51.pg_catalog.pg_constraint 1 1 156 879 0 0 36 ctdprd51.pub2.db 1 1 130 130 0 0 6 ctdprd51.pg_catalog.pg_type 1 1 113 1,155 0 0 35 ctdprd51.edit.race 1 0 81 27 0 0 1 ctdprd51.pg_toast.pg_toast_5519453 1 1 70 69 0 0 21 ctdprd51.edit.geographic_region 1 0 63 51 0 0 1 ctdprd51.edit.action_type 1 0 63 60 0 0 3 ctdprd51.edit.object_note 1 1 61 33 0 0 3 ctdprd51.edit.exp_outcome 1 1 55 13,126 0 0 203 ctdprd51.pub2.gene_gene 1 0 0 1,089,115 0 0 5,888 ctdprd51.pub2.exp_receptor_gender 1 0 0 187,612 0 0 1,315 ctdprd51.edit.db_link 1 0 0 322,197 0 0 3,589 ctdprd51.pub2.img 1 0 0 50,714 0 0 523 ctdprd51.pub2.gene_gene_ref_throughput 1 0 0 1,372,433 0 0 7,137 ctdprd51.pub1.term_comp_agent 6 0 0 1,041,379 0 0 9,357 ctdprd51.pub2.gene_gene_reference 1 0 0 1,366,819 0 0 14,881 ctdprd51.pub2.exp_stressor_stressor_src 1 0 0 283,222 0 0 1,254 ctdprd51.pub2.reference_party_role 1 0 0 1,219,976 0 0 6,595 ctdprd51.pub2.term_label 1 0 0 6,063,845 0 0 89,185 ctdprd51.pub2.exposure 1 0 0 213,899 0 0 1,761 ctdprd51.pg_toast.pg_toast_5519522 1 0 0 234,913 0 0 43,436 ctdprd51.pub2.gene_chem_ref_gene_form 1 0 0 2,928,137 0 0 15,861 ctdprd51.pub2.gene_go_annot 1 0 0 40,088,000 0 0 255,324 ctdprd51.pub2.exp_event_location 1 0 0 248,388 0 0 1,649 ctdprd51.pub2.dag_edge 1 0 0 88,931 0 0 481 ctdprd51.pub2.exp_receptor_race 1 0 0 95,671 0 0 620 ctdprd51.pub2.exp_outcome 1 0 0 12,817 0 0 227 ctdprd51.pub2.slim_term_mapping 1 0 0 32,795 0 0 261 ctdprd51.pub2.exp_receptor_tobacco_use 1 0 0 78,937 0 0 557 ctdprd51.pub1.term_set_enrichment_agent 1 0 0 75,584,269 0 0 858,913 ctdprd51.pub2.exp_event 1 0 0 206,810 0 0 6,077 ctdprd51.pub2.exp_event_project 1 0 0 94,501 0 0 985 ctdprd51.pub2.reference_exp 1 0 0 3,450 0 0 125 ctdprd51.pub2.exp_stressor 1 0 0 206,971 0 0 2,966 ctdprd51.pub2.term_reference 1 0 0 3,358,935 0 0 18,157 ctdprd51.pg_toast.pg_toast_5519585 1 0 0 49,065 0 0 9,441 ctdprd51.pub2.gene_taxon 1 0 0 10,646,095 0 0 67,810 ctdprd51.pub2.exp_receptor 1 0 0 190,369 0 0 3,597 ctdprd51.pub2.term_comp_agent 1 0 0 4,483 0 0 43 ctdprd51.pub2.reference_party 1 0 0 447,069 0 0 2,497 ctdprd51.pub2.term_set_enrichment 4 0 0 105,053 0 0 1,741 ctdprd51.pub2.exp_study_factor 1 0 0 1,617 0 0 10 ctdprd51.pub2.db_link 1 0 0 15,990,608 0 0 115,335 ctdprd51.pg_toast.pg_toast_486223 2 0 0 2 0 0 1 ctdprd51.pub2.term_set_enrichment_agent 5 0 0 6,083,687 0 0 69,137 ctdprd51.pub1.term_set_enrichment 1 0 0 1,152,255 0 0 19,067 ctdprd51.pub2.exp_anatomy 1 0 0 3,853 0 0 33 ctdprd51.pub2.term_pathway 1 0 0 135,792 0 0 1,613 ctdprd51.edit.reference_db_link 1 0 0 322,196 0 0 3,589 ctdprd51.pub2.exp_event_assay_method 1 0 0 235,134 0 0 2,343 Total 192 70 59,826,625 228,072,707 657,130 0 3,750,452 Pages removed per table
Key values
- unknown (0) Main table with removed pages on database unknown
- 0 pages Total removed
Pages removed per tables
NO DATASET
Table Number of vacuums Index scans Tuples removed Pages removed ctdprd51.pub2.reference 3 2 93859 0 ctdprd51.pg_catalog.pg_constraint 1 1 156 0 ctdprd51.pub2.gene_gene 1 0 0 0 ctdprd51.pub2.exp_receptor_gender 1 0 0 0 ctdprd51.edit.db_link 1 0 0 0 ctdprd51.pub2.img 1 0 0 0 ctdprd51.pub2.gene_gene_ref_throughput 1 0 0 0 ctdprd51.pub2.gene_disease 1 1 32839894 0 ctdprd51.pub1.term_comp_agent 6 0 0 0 ctdprd51.pub2.gene_gene_reference 1 0 0 0 ctdprd51.edit.geographic_region 1 0 63 0 ctdprd51.pub2.exp_stressor_stressor_src 1 0 0 0 ctdprd51.pg_toast.pg_toast_2619 4 4 14346 0 ctdprd51.edit.exp_outcome 1 1 55 0 ctdprd51.pub2.dag_node 2 1 1711272 0 ctdprd51.pub2.reference_party_role 1 0 0 0 ctdprd51.pub2.phenotype_term 2 2 19663134 0 ctdprd51.pub2.term_label 1 0 0 0 ctdprd51.pub2.exposure 1 0 0 0 ctdprd51.pub2.db 1 1 130 0 ctdprd51.pg_toast.pg_toast_5519522 1 0 0 0 ctdprd51.pub2.gene_chem_ref_gene_form 1 0 0 0 ctdprd51.pg_catalog.pg_trigger 1 1 468 0 ctdprd51.pub2.gene_go_annot 1 0 0 0 ctdprd51.pub2.exp_event_location 1 0 0 0 ctdprd51.pub2.dag_edge 1 0 0 0 ctdprd51.pub2.exp_receptor_race 1 0 0 0 ctdprd51.pub2.exp_outcome 1 0 0 0 ctdprd51.pub2.slim_term_mapping 1 0 0 0 ctdprd51.pub2.exp_receptor_tobacco_use 1 0 0 0 ctdprd51.pub1.term_set_enrichment_agent 1 0 0 0 ctdprd51.pg_catalog.pg_description 1 1 1038 0 ctdprd51.pub2.exp_event 1 0 0 0 ctdprd51.pg_catalog.pg_type 1 1 113 0 ctdprd51.pub2.exp_event_project 1 0 0 0 ctdprd51.pub2.reference_exp 1 0 0 0 ctdprd51.pg_catalog.pg_attribute 2 2 2094 0 ctdprd51.pub2.exp_stressor 1 0 0 0 ctdprd51.edit.action_type 1 0 63 0 ctdprd51.pub2.term 4 2 2093428 0 ctdprd51.pub2.term_reference 1 0 0 0 ctdprd51.pg_toast.pg_toast_5519585 1 0 0 0 ctdprd51.pub2.gene_taxon 1 0 0 0 ctdprd51.pub2.exp_receptor 1 0 0 0 ctdprd51.pub2.ixn 1 1 53468 0 ctdprd51.pub2.term_comp_agent 1 0 0 0 ctdprd51.pg_catalog.pg_depend 1 1 2391 0 postgres.pg_catalog.pg_shdepend 2 2 775 0 ctdprd51.pub2.reference_party 1 0 0 0 ctdprd51.pg_catalog.pg_class 3 3 514 0 ctdprd51.pub2.term_set_enrichment 4 0 0 0 ctdprd51.pub2.exp_study_factor 1 0 0 0 ctdprd51.pub2.db_link 1 0 0 0 ctdprd51.edit.object_note 1 1 61 0 ctdprd51.pg_toast.pg_toast_486223 2 0 0 0 ctdprd51.pub2.chem_disease 1 1 3313187 0 ctdprd51.pub2.term_set_enrichment_agent 5 0 0 0 ctdprd51.pub1.term_set_enrichment 1 0 0 0 ctdprd51.pg_toast.pg_toast_5519453 1 1 70 0 ctdprd51.pg_catalog.pg_index 1 1 335 0 ctdprd51.pub2.exp_anatomy 1 0 0 0 ctdprd51.pub2.term_pathway 1 0 0 0 ctdprd51.edit.race 1 0 81 0 ctdprd51.pg_catalog.pg_statistic 7 7 2729 0 ctdprd51.edit.reference_db_link 1 0 0 0 ctdprd51.pub2.exp_event_assay_method 1 0 0 0 ctdprd51.pubc.log_query 93 32 32901 0 Total 192 70 59,826,625 0 Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs Jun 23 00 0 4 01 0 2 02 0 2 03 0 2 04 0 3 05 0 3 06 0 1 07 0 1 08 0 1 09 0 4 10 0 3 11 0 1 12 0 0 13 0 1 14 0 0 15 0 1 16 0 2 17 0 0 18 0 2 19 0 0 20 0 1 21 0 0 22 0 0 23 0 1 Jun 24 00 0 3 01 0 3 02 0 3 03 0 3 04 0 2 05 0 3 06 0 1 07 0 1 08 0 1 09 0 1 10 0 2 11 0 1 12 0 0 13 0 3 14 0 1 15 0 1 16 0 2 17 0 3 18 0 0 19 0 0 20 0 1 21 0 1 22 0 0 23 0 1 Jun 25 00 0 3 01 0 3 02 0 3 03 0 2 04 0 2 05 0 2 06 0 1 07 0 1 08 0 1 09 0 1 10 0 1 11 0 0 12 0 1 13 0 0 14 0 1 15 0 12 16 0 16 17 0 1 18 0 0 19 0 0 20 0 1 21 0 0 22 0 1 23 0 0 Jun 26 00 0 1 01 0 2 02 0 2 03 0 2 04 0 2 05 0 3 06 0 1 07 0 0 08 0 1 09 0 7 10 0 0 11 0 2 12 0 0 13 0 1 14 0 0 15 0 1 16 0 13 17 0 8 18 0 0 19 0 1 20 0 0 21 0 2 22 0 2 23 0 29 Jun 27 00 0 2 01 0 6 02 0 4 03 0 7 04 0 1 05 0 7 06 0 1 07 0 2 08 0 1 09 0 1 10 0 6 11 0 3 12 0 1 13 0 0 14 0 3 15 0 0 16 0 0 17 0 1 18 0 0 19 0 1 20 0 0 21 0 1 22 0 0 23 0 1 Jun 28 00 0 2 01 0 3 02 0 1 03 0 2 04 0 3 05 0 3 06 0 1 07 0 1 08 0 1 09 0 2 10 0 1 11 0 1 12 0 0 13 0 1 14 0 0 15 0 1 16 0 2 17 0 1 18 0 0 19 0 1 20 0 0 21 0 0 22 0 1 23 0 0 Jun 29 00 0 1 01 0 4 02 0 3 03 0 2 04 0 3 05 0 7 06 0 1 07 0 1 08 0 1 09 0 1 10 0 0 11 0 1 12 0 0 13 0 1 14 0 0 15 0 1 16 0 0 17 0 1 18 0 0 19 0 0 20 0 1 21 0 0 22 0 0 23 0 1 - 251.32 sec Highest CPU-cost vacuum
-
Locks
Locks by types
Key values
- unknown Main Lock Type
- 0 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query NO DATASET
Queries that waited the most
Rank Wait time Query NO DATASET
-
Queries
Queries by type
Key values
- 6,495 Total read queries
- 455 Total write queries
Queries by database
Key values
- unknown Main database
- 4,496 Requests
- 19h16m2s (unknown)
- Main time consuming database
Queries by user
Key values
- unknown Main user
- 9,901 Requests
User Request type Count Duration edit Total 2 11s94ms select 2 11s94ms editeu Total 37 2m49s select 37 2m49s load Total 74 50m28s others 2 5s218ms select 72 50m23s postgres Total 108 41m54s copy to 108 41m54s pub1 Total 2 2s265ms select 2 2s265ms pub2 Total 20 24m30s ddl 2 8s473ms insert 6 23m50s select 10 29s488ms tcl 2 2s933ms pubeu Total 5,015 8h33m58s cte 43 2m5s select 4,972 8h31m52s qaeu Total 171 1h54m27s cte 21 1m11s select 150 1h53m16s unknown Total 9,901 1d12h54m46s copy to 698 6h25m52s cte 55 1m21s ddl 103 1h16m8s insert 53 1h20m22s others 40 55m18s select 8,934 1d1h52m52s update 18 1h2m50s Duration by user
Key values
- 1d12h54m46s (unknown) Main time consuming user
User Request type Count Duration edit Total 2 11s94ms select 2 11s94ms editeu Total 37 2m49s select 37 2m49s load Total 74 50m28s others 2 5s218ms select 72 50m23s postgres Total 108 41m54s copy to 108 41m54s pub1 Total 2 2s265ms select 2 2s265ms pub2 Total 20 24m30s ddl 2 8s473ms insert 6 23m50s select 10 29s488ms tcl 2 2s933ms pubeu Total 5,015 8h33m58s cte 43 2m5s select 4,972 8h31m52s qaeu Total 171 1h54m27s cte 21 1m11s select 150 1h53m16s unknown Total 9,901 1d12h54m46s copy to 698 6h25m52s cte 55 1m21s ddl 103 1h16m8s insert 53 1h20m22s others 40 55m18s select 8,934 1d1h52m52s update 18 1h2m50s Queries by host
Key values
- unknown Main host
- 15,330 Requests
- 2d1h23m9s (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 6,898 Requests
- 1d1h33s (unknown)
- Main time consuming application
Application Request type Count Duration pgAdmin 4 - CONN:749457 Total 1 5s547ms select 1 5s547ms pgAdmin 4 - CONN:749978 Total 1 12s233ms select 1 12s233ms pgAdmin 4 - CONN:847577 Total 1 1s466ms tcl 1 1s466ms pgAdmin 4 - DB:ctdprd51 Total 1 1s99ms select 1 1s99ms pg_bulkload Total 24 13m34s select 24 13m34s pg_dump Total 49 19m8s copy to 49 19m8s psql Total 5 11s286ms ddl 1 4s236ms select 4 7s49ms unknown Total 6,898 1d1h33s copy to 262 1h46m36s cte 50 1m56s ddl 53 38m33s insert 30 53m26s others 30 52m24s select 6,464 20h16m10s update 9 31m25s Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2024-06-24 15:41:10 Date
Number of cancelled queries (5 minutes period)
NO DATASET
-
Top Queries
Histogram of query times
Key values
- 6,579 1000-10000ms duration
Slowest individual queries
Rank Duration Query 1 1h56m7s select pub2.maint_term_derive_data ();[ Date: 2024-06-27 05:02:55 - Bind query: yes ]
2 1h36m6s select pub2.maint_gene_chem_ref_gene_form_refresh ();[ Date: 2024-06-27 01:12:24 - Bind query: yes ]
3 59m17s SELECT maint_term_derive_nm_fts ();[ Date: 2024-06-27 02:14:31 - Bind query: yes ]
4 46m21s VACUUM FULL ANALYZE;[ Date: 2024-06-27 03:06:26 - Bind query: yes ]
5 39m27s select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.GENE_GO_ANNOT gga, pub2.PHENOTYPE_TERM_REFERENCE ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');[ Date: 2024-06-26 20:00:13 - Bind query: yes ]
6 37m12s select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');[ Date: 2024-06-26 19:20:40 - Bind query: yes ]
7 34m16s SELECT i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) FROM edit.IXN i, edit.REFERENCE_IXN r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in ('bogusName') order by i.id asc;[ Date: 2024-06-26 17:50:22 - Bind query: yes ]
8 33m32s select pub2.maint_cached_value_refresh_data_metrics ();[ Date: 2024-06-27 05:46:19 - Bind query: yes ]
9 32m13s SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;[ Date: 2024-06-27 10:33:26 - Database: ctdprd51 - User: qaeu - Bind query: yes ]
10 23m36s update pub2.GENE_DISEASE gd set exposure_reference_qty = ( select count(distinct reference_id) from pub2.GENE_DISEASE_REFERENCE gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub2.REFERENCE r where has_exposures = true));[ Date: 2024-06-26 23:31:10 - Bind query: yes ]
11 23m27s COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2024-06-29 19:41:48 ]
12 23m22s insert into pub2.GENE_GO_ANNOT (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.GENE_GO_ANNOT;[ Date: 2024-06-26 17:07:59 - Bind query: yes ]
13 23m19s COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2024-06-29 19:00:12 ]
14 17m44s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1233923') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-06-26 09:53:01 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
15 17m28s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1233923') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-06-26 10:00:17 - Bind query: yes ]
16 17m21s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1233923') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-06-26 21:49:51 - Bind query: yes ]
17 17m9s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1233923') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-06-28 00:35:25 - Bind query: yes ]
18 16m24s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-06-27 00:16:26 ]
19 16m20s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-06-29 00:16:21 ]
20 16m19s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-06-28 00:16:20 ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 3h34m45s 53 1s459ms 17m44s 4m3s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jun 23 02 1 1s665ms 1s665ms 06 1 3m37s 3m37s 07 1 3m6s 3m6s 13 1 3m37s 3m37s 15 1 4m57s 4m57s 18 2 2s935ms 1s467ms Jun 24 02 1 1s631ms 1s631ms 06 2 7m26s 3m43s 19 3 10m35s 3m31s 20 1 1s694ms 1s694ms 22 1 1m18s 1m18s Jun 25 02 1 1s841ms 1s841ms 07 2 6m44s 3m22s 08 1 1s961ms 1s961ms 12 1 5m5s 5m5s 13 4 19m54s 4m58s 14 7 24m14s 3m27s 16 1 3m37s 3m37s 23 1 4m33s 4m33s Jun 26 02 1 2s55ms 2s55ms 06 1 3m37s 3m37s 09 5 35m48s 7m9s 10 1 17m28s 17m28s 14 1 2m25s 2m25s 21 3 26m6s 8m42s 22 1 1m20s 1m20s Jun 27 15 1 3m38s 3m38s Jun 28 00 1 17m9s 17m9s 07 1 3m36s 3m36s 09 1 3s165ms 3s165ms 22 1 1m18s 1m18s Jun 29 07 1 3m6s 3m6s 08 1 1s488ms 1s488ms [ User: pubeu - Total duration: 1h38m18s - Times executed: 29 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1233923') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-06-26 09:53:01 Duration: 17m44s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1233923') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-06-26 10:00:17 Duration: 17m28s Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1233923') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-06-26 21:49:51 Duration: 17m21s Bind query: yes
2 1h56m7s 1 1h56m7s 1h56m7s 1h56m7s select pub2.maint_term_derive_data ();Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jun 27 05 1 1h56m7s 1h56m7s -
select pub2.maint_term_derive_data ();
Date: 2024-06-27 05:02:55 Duration: 1h56m7s Bind query: yes
3 1h54m12s 7 16m14s 16m24s 16m18s select maint_query_logs_archive ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jun 23 00 1 16m14s 16m14s Jun 24 00 1 16m18s 16m18s Jun 25 00 1 16m18s 16m18s Jun 26 00 1 16m16s 16m16s Jun 27 00 1 16m24s 16m24s Jun 28 00 1 16m19s 16m19s Jun 29 00 1 16m20s 16m20s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-06-27 00:16:26 Duration: 16m24s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-06-29 00:16:21 Duration: 16m20s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-06-28 00:16:20 Duration: 16m19s
4 1h36m6s 1 1h36m6s 1h36m6s 1h36m6s select pub2.maint_gene_chem_ref_gene_form_refresh ();Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jun 27 01 1 1h36m6s 1h36m6s -
select pub2.maint_gene_chem_ref_gene_form_refresh ();
Date: 2024-06-27 01:12:24 Duration: 1h36m6s Bind query: yes
5 59m17s 1 59m17s 59m17s 59m17s select maint_term_derive_nm_fts ();Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jun 27 02 1 59m17s 59m17s -
SELECT maint_term_derive_nm_fts ();
Date: 2024-06-27 02:14:31 Duration: 59m17s Bind query: yes
6 48m12s 221 2s559ms 32m13s 13s89ms select g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(r.acc_txt, ? order by r.acc_txt) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id group by g.nm, g.acc_txt, d.nm, d.acc_db_cd || ? || d.acc_txt, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by g.nm, d.nm;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jun 27 10 164 44m5s 16s133ms 11 57 4m6s 4s331ms [ User: qaeu - Total duration: 32m13s - Times executed: 1 ]
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-06-27 10:33:26 Duration: 32m13s Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-06-27 10:52:10 Duration: 5s740ms Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-06-27 10:39:28 Duration: 5s629ms Bind query: yes
7 46m21s 1 46m21s 46m21s 46m21s vacuum full analyze;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jun 27 03 1 46m21s 46m21s -
VACUUM FULL ANALYZE;
Date: 2024-06-27 03:06:26 Duration: 46m21s Bind query: yes
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VACUUM FULL ANALYZE;
Date: 2024-06-27 02:20:19 Duration: 0ms
8 44m33s 73 1s11ms 6m27s 36s628ms select * from pgbulkload.pg_bulkload (?);Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jun 25 16 31 13m23s 25s924ms 17 9 7m52s 52s495ms Jun 26 17 6 1m7s 11s193ms 20 6 14m28s 2m24s 21 14 4m 17s204ms 22 4 3m18s 49s702ms 23 3 22s751ms 7s583ms [ User: load - Total duration: 13m34s - Times executed: 24 ]
[ Application: pg_bulkload - Total duration: 13m34s - Times executed: 24 ]
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.GENE_DISEASE_REFERENCE,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.log,parse-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.DUPE}');
Date: 2024-06-26 20:11:16 Duration: 6m27s Database: ctdprd51 User: load Application: pg_bulkload Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.DAG_PATH,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.log,parse-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.DUPE}');
Date: 2024-06-26 20:38:46 Duration: 5m12s Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=edit.DB_LINK,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.log,parse-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.DUPE}');
Date: 2024-06-25 16:46:47 Duration: 3m45s Bind query: yes
9 43m1s 2,189 1s84ms 2s817ms 1s179ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where exposuremarkerterm.id = ? or receptorterm.id = ? group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jun 23 00 21 24s532ms 1s168ms 01 15 17s604ms 1s173ms 02 12 14s218ms 1s184ms 03 15 17s668ms 1s177ms 04 22 26s32ms 1s183ms 05 19 22s592ms 1s189ms 06 4 4s768ms 1s192ms 07 8 9s465ms 1s183ms 08 22 25s867ms 1s175ms 09 8 9s433ms 1s179ms 10 15 17s650ms 1s176ms 11 22 26s53ms 1s184ms 12 12 14s218ms 1s184ms 13 24 28s393ms 1s183ms 14 32 37s461ms 1s170ms 15 19 21s828ms 1s148ms 16 27 31s36ms 1s149ms 17 14 16s247ms 1s160ms 18 26 30s178ms 1s160ms 19 31 35s771ms 1s153ms 20 31 35s846ms 1s156ms 21 14 16s48ms 1s146ms 22 15 17s676ms 1s178ms 23 17 20s71ms 1s180ms Jun 24 00 11 13s116ms 1s192ms 01 16 18s797ms 1s174ms 02 22 26s98ms 1s186ms 03 16 18s946ms 1s184ms 04 16 18s878ms 1s179ms 05 26 31s116ms 1s196ms 06 16 18s675ms 1s167ms 07 12 14s260ms 1s188ms 08 12 14s196ms 1s183ms 09 23 27s106ms 1s178ms 10 11 12s955ms 1s177ms 11 25 28s947ms 1s157ms 12 12 13s951ms 1s162ms 13 10 11s559ms 1s155ms 14 24 27s739ms 1s155ms 15 20 23s130ms 1s156ms 16 19 21s981ms 1s156ms 17 13 15s147ms 1s165ms 18 15 17s384ms 1s158ms 19 26 31s30ms 1s193ms 20 23 26s680ms 1s160ms 21 11 12s717ms 1s156ms 22 28 32s956ms 1s177ms 23 17 20s65ms 1s180ms Jun 25 00 10 11s799ms 1s179ms 01 23 27s314ms 1s187ms 02 20 23s946ms 1s197ms 03 14 16s552ms 1s182ms 04 17 20s166ms 1s186ms 05 26 31s17ms 1s192ms 06 11 12s878ms 1s170ms 07 14 16s624ms 1s187ms 08 13 15s440ms 1s187ms 09 10 11s747ms 1s174ms 10 22 25s350ms 1s152ms 11 19 21s917ms 1s153ms 12 20 23s63ms 1s153ms 13 9 10s215ms 1s135ms 14 14 17s72ms 1s219ms 15 23 26s848ms 1s167ms 16 13 15s233ms 1s171ms 17 16 19s4ms 1s187ms 18 11 12s810ms 1s164ms 19 9 10s622ms 1s180ms 20 13 15s320ms 1s178ms 21 13 15s362ms 1s181ms 22 12 14s77ms 1s173ms 23 14 16s545ms 1s181ms Jun 26 00 10 11s708ms 1s170ms 01 11 13s109ms 1s191ms 02 11 12s943ms 1s176ms 03 6 7s43ms 1s173ms 04 15 17s887ms 1s192ms 05 12 14s298ms 1s191ms 06 8 9s420ms 1s177ms 07 6 7s53ms 1s175ms 08 15 17s791ms 1s186ms 09 28 35s999ms 1s285ms 10 14 16s442ms 1s174ms 11 13 15s360ms 1s181ms 12 16 18s776ms 1s173ms 13 3 3s508ms 1s169ms 14 16 18s849ms 1s178ms 15 7 8s283ms 1s183ms 16 10 11s722ms 1s172ms 17 12 13s843ms 1s153ms 18 8 9s227ms 1s153ms 19 4 4s610ms 1s152ms 20 16 18s719ms 1s169ms 21 39 47s362ms 1s214ms 22 24 27s965ms 1s165ms 23 11 12s804ms 1s164ms Jun 27 00 16 18s343ms 1s146ms 01 22 25s389ms 1s154ms 02 14 16s806ms 1s200ms 03 8 9s503ms 1s187ms 04 20 23s11ms 1s150ms 05 12 14s152ms 1s179ms 06 7 8s246ms 1s178ms 07 14 16s313ms 1s165ms 08 6 6s925ms 1s154ms 09 8 9s360ms 1s170ms 10 9 10s667ms 1s185ms 11 9 10s640ms 1s182ms 12 7 8s186ms 1s169ms 13 12 14s112ms 1s176ms 14 13 16s758ms 1s289ms 15 7 8s184ms 1s169ms 16 7 8s375ms 1s196ms 17 16 18s835ms 1s177ms 18 8 9s413ms 1s176ms 19 17 19s916ms 1s171ms 20 10 11s734ms 1s173ms 21 4 4s725ms 1s181ms 22 12 14s105ms 1s175ms 23 9 10s534ms 1s170ms Jun 28 00 7 8s127ms 1s161ms 01 9 10s737ms 1s193ms 02 10 11s772ms 1s177ms 03 7 8s311ms 1s187ms 04 10 11s754ms 1s175ms 05 10 12s9ms 1s200ms 06 13 15s421ms 1s186ms 07 12 14s197ms 1s183ms 08 4 4s681ms 1s170ms 09 17 20s131ms 1s184ms 10 12 14s212ms 1s184ms 11 4 4s807ms 1s201ms 12 4 4s709ms 1s177ms 13 8 9s519ms 1s189ms 14 7 8s390ms 1s198ms 15 7 9s484ms 1s354ms 16 4 4s742ms 1s185ms 17 5 6s3ms 1s200ms 18 7 8s337ms 1s191ms 19 10 11s942ms 1s194ms 20 10 11s988ms 1s198ms 21 5 5s930ms 1s186ms 22 4 4s781ms 1s195ms 23 7 8s342ms 1s191ms Jun 29 00 10 11s903ms 1s190ms 01 10 11s915ms 1s191ms 02 8 9s335ms 1s166ms 03 16 19s117ms 1s194ms 04 11 13s39ms 1s185ms 05 11 13s278ms 1s207ms 06 8 9s580ms 1s197ms 07 10 12s9ms 1s200ms 08 8 9s485ms 1s185ms 09 8 9s478ms 1s184ms 10 6 7s94ms 1s182ms 11 6 7s127ms 1s187ms 12 3 3s638ms 1s212ms 13 5 5s975ms 1s195ms 14 5 6s18ms 1s203ms 15 3 3s550ms 1s183ms 16 11 13s113ms 1s192ms 17 10 11s895ms 1s189ms 18 2 2s351ms 1s175ms 19 3 3s430ms 1s143ms 20 6 7s3ms 1s167ms 21 9 10s553ms 1s172ms 22 4 4s817ms 1s204ms 23 6 7s173ms 1s195ms [ User: pubeu - Total duration: 17m15s - Times executed: 879 ]
[ User: qaeu - Total duration: 3s781ms - Times executed: 3 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1431620' or receptorTerm.id = '1431620' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-06-26 09:44:03 Duration: 2s817ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1431600' or receptorTerm.id = '1431600' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-06-26 21:32:40 Duration: 2s776ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '2021876' or receptorTerm.id = '2021876' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-06-28 15:01:42 Duration: 2s254ms Database: ctdprd51 User: pubeu Bind query: yes
10 40m36s 11 2m57s 5m17s 3m41s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by referencecount desc limit ? offset ?;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jun 25 14 6 19m56s 3m19s 23 3 10m42s 3m34s Jun 26 00 2 9m56s 4m58s [ User: pubeu - Total duration: 34m41s - Times executed: 9 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1229069') and diseaseTerm.object_type_id = 3 ORDER BY referenceCount DESC LIMIT 50 OFFSET 50;
Date: 2024-06-26 00:30:46 Duration: 5m17s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1229068') and diseaseTerm.object_type_id = 3 ORDER BY referenceCount DESC LIMIT 50 OFFSET 50;
Date: 2024-06-25 14:40:38 Duration: 4m51s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1229068') and diseaseTerm.object_type_id = 3 ORDER BY referenceCount DESC LIMIT 50 OFFSET 50;
Date: 2024-06-25 23:31:42 Duration: 4m47s Database: ctdprd51 User: pubeu Bind query: yes
11 39m27s 1 39m27s 39m27s 39m27s select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.gene_go_annot gga, pub2.phenotype_term_reference ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jun 26 20 1 39m27s 39m27s -
select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.GENE_GO_ANNOT gga, pub2.PHENOTYPE_TERM_REFERENCE ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');
Date: 2024-06-26 20:00:13 Duration: 39m27s Bind query: yes
12 37m12s 1 37m12s 37m12s 37m12s select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.object_type where cd = ?), ptr.term_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.phenotype_term_reference ptr, pub2.phenotype_term_reference ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jun 26 19 1 37m12s 37m12s -
select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');
Date: 2024-06-26 19:20:40 Duration: 37m12s Bind query: yes
13 34m16s 1 34m16s 34m16s 34m16s select i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) from edit.ixn i, edit.reference_ixn r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in (...) order by i.id asc;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jun 26 17 1 34m16s 34m16s -
SELECT i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) FROM edit.IXN i, edit.REFERENCE_IXN r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in ('bogusName') order by i.id asc;
Date: 2024-06-26 17:50:22 Duration: 34m16s Bind query: yes
14 33m32s 1 33m32s 33m32s 33m32s select pub2.maint_cached_value_refresh_data_metrics ();Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jun 27 05 1 33m32s 33m32s -
select pub2.maint_cached_value_refresh_data_metrics ();
Date: 2024-06-27 05:46:19 Duration: 33m32s Bind query: yes
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select pub2.maint_cached_value_refresh_data_metrics ();
Date: 2024-06-27 05:42:08 Duration: 0ms
15 25m3s 24 2s407ms 5m42s 1m2s select r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refacc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, count(*) over () fullrowcount from reference r where r.id in ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) order by r.sort_txt limit ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jun 23 08 1 12s543ms 12s543ms 20 1 39s915ms 39s915ms 21 1 49s651ms 49s651ms Jun 24 23 1 29s295ms 29s295ms Jun 25 00 1 53s653ms 53s653ms 01 1 39s623ms 39s623ms 04 1 45s770ms 45s770ms 07 1 40s550ms 40s550ms 10 1 34s271ms 34s271ms 18 1 42s559ms 42s559ms 21 1 29s836ms 29s836ms Jun 26 06 1 2s539ms 2s539ms 11 2 42s95ms 21s47ms 14 1 2s707ms 2s707ms 18 1 49s228ms 49s228ms Jun 27 07 1 39s90ms 39s90ms 14 4 8m49s 2m12s 15 1 5m42s 5m42s Jun 28 19 1 35s553ms 35s553ms Jun 29 01 1 42s531ms 42s531ms [ User: qaeu - Total duration: 12m32s - Times executed: 4 ]
[ User: pubeu - Total duration: 4m10s - Times executed: 7 ]
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1426816')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-06-27 15:00:08 Duration: 5m42s Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1426816')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-06-27 14:56:34 Duration: 2m22s Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1426816')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-06-27 14:55:42 Duration: 2m15s Database: ctdprd51 User: qaeu Bind query: yes
16 23m40s 291 1s5ms 22s236ms 4s882ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jun 23 00 1 1s218ms 1s218ms 03 1 2s604ms 2s604ms 05 1 2s574ms 2s574ms 08 2 10s520ms 5s260ms 09 1 1s357ms 1s357ms 10 1 1s239ms 1s239ms 11 1 2s406ms 2s406ms 13 17 1m31s 5s365ms 15 1 1s302ms 1s302ms 18 1 1s349ms 1s349ms 21 3 7s725ms 2s575ms 22 2 7s13ms 3s506ms Jun 24 06 1 2s402ms 2s402ms 07 1 2s337ms 2s337ms 08 2 2s844ms 1s422ms 09 4 5s524ms 1s381ms 10 1 1s436ms 1s436ms 11 2 2s396ms 1s198ms 14 2 4s773ms 2s386ms 16 1 1s235ms 1s235ms 17 8 20s139ms 2s517ms 18 1 1s787ms 1s787ms 20 2 7s237ms 3s618ms 22 1 3s118ms 3s118ms 23 1 1s468ms 1s468ms Jun 25 02 1 1s148ms 1s148ms 04 1 1s484ms 1s484ms 05 2 7s686ms 3s843ms 07 1 4s746ms 4s746ms 08 3 7s282ms 2s427ms 09 1 2s877ms 2s877ms 10 1 1s173ms 1s173ms 11 1 1s211ms 1s211ms 12 1 3s802ms 3s802ms 15 1 2s376ms 2s376ms 16 1 1s165ms 1s165ms 17 2 2s738ms 1s369ms 18 1 1s218ms 1s218ms 23 3 6s685ms 2s228ms Jun 26 00 1 2s389ms 2s389ms 02 1 1s108ms 1s108ms 09 114 12m41s 6s682ms 10 2 4s946ms 2s473ms 15 1 1s383ms 1s383ms 19 1 2s231ms 2s231ms 21 45 4m15s 5s672ms 22 2 4s437ms 2s218ms Jun 27 00 1 4s673ms 4s673ms 01 1 2s214ms 2s214ms 04 3 9s163ms 3s54ms 06 8 20s468ms 2s558ms 07 5 28s302ms 5s660ms 08 2 4s729ms 2s364ms 10 1 4s995ms 4s995ms 17 1 1s370ms 1s370ms 18 1 1s164ms 1s164ms 19 1 1s265ms 1s265ms 22 1 2s769ms 2s769ms 23 1 1s975ms 1s975ms Jun 28 02 1 1s195ms 1s195ms 04 1 1s385ms 1s385ms 05 2 10s211ms 5s105ms 06 3 12s612ms 4s204ms 08 1 2s258ms 2s258ms 09 3 12s381ms 4s127ms 15 1 4s939ms 4s939ms Jun 29 05 1 5s895ms 5s895ms 09 3 9s588ms 3s196ms 18 1 2s173ms 2s173ms 21 2 8s687ms 4s343ms [ User: pubeu - Total duration: 9m3s - Times executed: 113 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2074152') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-06-26 09:44:08 Duration: 22s236ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2080955') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-06-26 09:44:07 Duration: 21s513ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2068897') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-06-26 09:44:00 Duration: 20s678ms Bind query: yes
17 23m36s 1 23m36s 23m36s 23m36s update pub2.gene_disease gd set exposure_reference_qty = ( select count(distinct reference_id) from pub2.gene_disease_reference gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub2.reference r where has_exposures = true));Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jun 26 23 1 23m36s 23m36s -
update pub2.GENE_DISEASE gd set exposure_reference_qty = ( select count(distinct reference_id) from pub2.GENE_DISEASE_REFERENCE gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub2.REFERENCE r where has_exposures = true));
Date: 2024-06-26 23:31:10 Duration: 23m36s Bind query: yes
18 23m27s 1 23m27s 23m27s 23m27s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jun 29 19 1 23m27s 23m27s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-06-29 19:41:48 Duration: 23m27s
19 23m22s 1 23m22s 23m22s 23m22s insert into pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.gene_go_annot;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jun 26 17 1 23m22s 23m22s -
insert into pub2.GENE_GO_ANNOT (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.GENE_GO_ANNOT;
Date: 2024-06-26 17:07:59 Duration: 23m22s Bind query: yes
20 23m19s 1 23m19s 23m19s 23m19s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jun 29 19 1 23m19s 23m19s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-06-29 19:00:12 Duration: 23m19s
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 2,189 43m1s 1s84ms 2s817ms 1s179ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where exposuremarkerterm.id = ? or receptorterm.id = ? group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jun 23 00 21 24s532ms 1s168ms 01 15 17s604ms 1s173ms 02 12 14s218ms 1s184ms 03 15 17s668ms 1s177ms 04 22 26s32ms 1s183ms 05 19 22s592ms 1s189ms 06 4 4s768ms 1s192ms 07 8 9s465ms 1s183ms 08 22 25s867ms 1s175ms 09 8 9s433ms 1s179ms 10 15 17s650ms 1s176ms 11 22 26s53ms 1s184ms 12 12 14s218ms 1s184ms 13 24 28s393ms 1s183ms 14 32 37s461ms 1s170ms 15 19 21s828ms 1s148ms 16 27 31s36ms 1s149ms 17 14 16s247ms 1s160ms 18 26 30s178ms 1s160ms 19 31 35s771ms 1s153ms 20 31 35s846ms 1s156ms 21 14 16s48ms 1s146ms 22 15 17s676ms 1s178ms 23 17 20s71ms 1s180ms Jun 24 00 11 13s116ms 1s192ms 01 16 18s797ms 1s174ms 02 22 26s98ms 1s186ms 03 16 18s946ms 1s184ms 04 16 18s878ms 1s179ms 05 26 31s116ms 1s196ms 06 16 18s675ms 1s167ms 07 12 14s260ms 1s188ms 08 12 14s196ms 1s183ms 09 23 27s106ms 1s178ms 10 11 12s955ms 1s177ms 11 25 28s947ms 1s157ms 12 12 13s951ms 1s162ms 13 10 11s559ms 1s155ms 14 24 27s739ms 1s155ms 15 20 23s130ms 1s156ms 16 19 21s981ms 1s156ms 17 13 15s147ms 1s165ms 18 15 17s384ms 1s158ms 19 26 31s30ms 1s193ms 20 23 26s680ms 1s160ms 21 11 12s717ms 1s156ms 22 28 32s956ms 1s177ms 23 17 20s65ms 1s180ms Jun 25 00 10 11s799ms 1s179ms 01 23 27s314ms 1s187ms 02 20 23s946ms 1s197ms 03 14 16s552ms 1s182ms 04 17 20s166ms 1s186ms 05 26 31s17ms 1s192ms 06 11 12s878ms 1s170ms 07 14 16s624ms 1s187ms 08 13 15s440ms 1s187ms 09 10 11s747ms 1s174ms 10 22 25s350ms 1s152ms 11 19 21s917ms 1s153ms 12 20 23s63ms 1s153ms 13 9 10s215ms 1s135ms 14 14 17s72ms 1s219ms 15 23 26s848ms 1s167ms 16 13 15s233ms 1s171ms 17 16 19s4ms 1s187ms 18 11 12s810ms 1s164ms 19 9 10s622ms 1s180ms 20 13 15s320ms 1s178ms 21 13 15s362ms 1s181ms 22 12 14s77ms 1s173ms 23 14 16s545ms 1s181ms Jun 26 00 10 11s708ms 1s170ms 01 11 13s109ms 1s191ms 02 11 12s943ms 1s176ms 03 6 7s43ms 1s173ms 04 15 17s887ms 1s192ms 05 12 14s298ms 1s191ms 06 8 9s420ms 1s177ms 07 6 7s53ms 1s175ms 08 15 17s791ms 1s186ms 09 28 35s999ms 1s285ms 10 14 16s442ms 1s174ms 11 13 15s360ms 1s181ms 12 16 18s776ms 1s173ms 13 3 3s508ms 1s169ms 14 16 18s849ms 1s178ms 15 7 8s283ms 1s183ms 16 10 11s722ms 1s172ms 17 12 13s843ms 1s153ms 18 8 9s227ms 1s153ms 19 4 4s610ms 1s152ms 20 16 18s719ms 1s169ms 21 39 47s362ms 1s214ms 22 24 27s965ms 1s165ms 23 11 12s804ms 1s164ms Jun 27 00 16 18s343ms 1s146ms 01 22 25s389ms 1s154ms 02 14 16s806ms 1s200ms 03 8 9s503ms 1s187ms 04 20 23s11ms 1s150ms 05 12 14s152ms 1s179ms 06 7 8s246ms 1s178ms 07 14 16s313ms 1s165ms 08 6 6s925ms 1s154ms 09 8 9s360ms 1s170ms 10 9 10s667ms 1s185ms 11 9 10s640ms 1s182ms 12 7 8s186ms 1s169ms 13 12 14s112ms 1s176ms 14 13 16s758ms 1s289ms 15 7 8s184ms 1s169ms 16 7 8s375ms 1s196ms 17 16 18s835ms 1s177ms 18 8 9s413ms 1s176ms 19 17 19s916ms 1s171ms 20 10 11s734ms 1s173ms 21 4 4s725ms 1s181ms 22 12 14s105ms 1s175ms 23 9 10s534ms 1s170ms Jun 28 00 7 8s127ms 1s161ms 01 9 10s737ms 1s193ms 02 10 11s772ms 1s177ms 03 7 8s311ms 1s187ms 04 10 11s754ms 1s175ms 05 10 12s9ms 1s200ms 06 13 15s421ms 1s186ms 07 12 14s197ms 1s183ms 08 4 4s681ms 1s170ms 09 17 20s131ms 1s184ms 10 12 14s212ms 1s184ms 11 4 4s807ms 1s201ms 12 4 4s709ms 1s177ms 13 8 9s519ms 1s189ms 14 7 8s390ms 1s198ms 15 7 9s484ms 1s354ms 16 4 4s742ms 1s185ms 17 5 6s3ms 1s200ms 18 7 8s337ms 1s191ms 19 10 11s942ms 1s194ms 20 10 11s988ms 1s198ms 21 5 5s930ms 1s186ms 22 4 4s781ms 1s195ms 23 7 8s342ms 1s191ms Jun 29 00 10 11s903ms 1s190ms 01 10 11s915ms 1s191ms 02 8 9s335ms 1s166ms 03 16 19s117ms 1s194ms 04 11 13s39ms 1s185ms 05 11 13s278ms 1s207ms 06 8 9s580ms 1s197ms 07 10 12s9ms 1s200ms 08 8 9s485ms 1s185ms 09 8 9s478ms 1s184ms 10 6 7s94ms 1s182ms 11 6 7s127ms 1s187ms 12 3 3s638ms 1s212ms 13 5 5s975ms 1s195ms 14 5 6s18ms 1s203ms 15 3 3s550ms 1s183ms 16 11 13s113ms 1s192ms 17 10 11s895ms 1s189ms 18 2 2s351ms 1s175ms 19 3 3s430ms 1s143ms 20 6 7s3ms 1s167ms 21 9 10s553ms 1s172ms 22 4 4s817ms 1s204ms 23 6 7s173ms 1s195ms [ User: pubeu - Total duration: 17m15s - Times executed: 879 ]
[ User: qaeu - Total duration: 3s781ms - Times executed: 3 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1431620' or receptorTerm.id = '1431620' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-06-26 09:44:03 Duration: 2s817ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1431600' or receptorTerm.id = '1431600' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-06-26 21:32:40 Duration: 2s776ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '2021876' or receptorTerm.id = '2021876' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-06-28 15:01:42 Duration: 2s254ms Database: ctdprd51 User: pubeu Bind query: yes
2 731 15m42s 1s190ms 2s326ms 1s289ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or receptorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jun 23 00 8 10s390ms 1s298ms 01 5 6s458ms 1s291ms 02 7 9s53ms 1s293ms 03 3 3s852ms 1s284ms 04 9 11s553ms 1s283ms 05 7 9s437ms 1s348ms 06 8 10s383ms 1s297ms 07 3 3s815ms 1s271ms 08 8 10s458ms 1s307ms 09 4 5s166ms 1s291ms 10 2 2s589ms 1s294ms 11 9 11s650ms 1s294ms 12 7 9s13ms 1s287ms 13 2 2s532ms 1s266ms 14 12 15s251ms 1s270ms 15 5 6s316ms 1s263ms 16 2 2s513ms 1s256ms 17 4 5s124ms 1s281ms 18 4 5s123ms 1s280ms 19 6 7s565ms 1s260ms 20 7 8s858ms 1s265ms 21 4 5s70ms 1s267ms 22 3 3s808ms 1s269ms 23 6 7s736ms 1s289ms Jun 24 00 4 5s198ms 1s299ms 01 6 7s757ms 1s292ms 02 1 1s299ms 1s299ms 03 5 6s471ms 1s294ms 04 4 5s220ms 1s305ms 05 8 10s446ms 1s305ms 06 7 8s724ms 1s246ms 07 4 5s250ms 1s312ms 08 4 5s167ms 1s291ms 09 4 5s169ms 1s292ms 11 7 8s806ms 1s258ms 12 6 7s654ms 1s275ms 13 5 6s449ms 1s289ms 14 7 8s858ms 1s265ms 15 4 5s116ms 1s279ms 16 6 7s480ms 1s246ms 17 3 3s729ms 1s243ms 18 2 2s491ms 1s245ms 19 7 8s965ms 1s280ms 20 9 11s463ms 1s273ms 21 6 7s503ms 1s250ms 22 7 9s108ms 1s301ms 23 5 6s303ms 1s260ms Jun 25 00 4 5s135ms 1s283ms 01 7 9s68ms 1s295ms 02 4 5s406ms 1s351ms 03 4 5s226ms 1s306ms 04 3 3s904ms 1s301ms 05 4 5s368ms 1s342ms 06 7 8s974ms 1s282ms 07 3 3s845ms 1s281ms 08 3 3s833ms 1s277ms 09 5 6s381ms 1s276ms 10 7 8s891ms 1s270ms 11 3 3s780ms 1s260ms 12 9 11s399ms 1s266ms 14 8 9s858ms 1s232ms 15 3 3s890ms 1s296ms 16 4 5s121ms 1s280ms 17 6 7s659ms 1s276ms 18 5 6s454ms 1s290ms 19 3 3s841ms 1s280ms 20 2 2s715ms 1s357ms 21 1 1s312ms 1s312ms 22 6 7s794ms 1s299ms 23 4 6s217ms 1s554ms Jun 26 00 1 1s324ms 1s324ms 01 2 2s592ms 1s296ms 02 4 5s155ms 1s288ms 03 4 5s244ms 1s311ms 04 3 3s907ms 1s302ms 05 7 9s135ms 1s305ms 06 3 3s879ms 1s293ms 07 4 5s238ms 1s309ms 08 2 2s627ms 1s313ms 10 5 6s278ms 1s255ms 11 3 3s877ms 1s292ms 12 3 3s857ms 1s285ms 13 3 3s904ms 1s301ms 14 2 2s561ms 1s280ms 15 2 2s608ms 1s304ms 16 1 1s307ms 1s307ms 17 4 5s148ms 1s287ms 18 3 3s750ms 1s250ms 19 1 1s265ms 1s265ms 20 3 3s864ms 1s288ms 21 2 2s520ms 1s260ms 22 10 12s703ms 1s270ms 23 6 7s702ms 1s283ms Jun 27 00 3 3s687ms 1s229ms 01 6 7s682ms 1s280ms 02 4 5s245ms 1s311ms 03 8 10s198ms 1s274ms 04 3 3s726ms 1s242ms 05 10 12s827ms 1s282ms 06 3 3s826ms 1s275ms 07 3 3s800ms 1s266ms 08 2 2s587ms 1s293ms 09 2 2s688ms 1s344ms 10 3 3s930ms 1s310ms 11 5 6s485ms 1s297ms 12 2 2s457ms 1s228ms 13 7 9s91ms 1s298ms 14 3 3s943ms 1s314ms 15 3 3s879ms 1s293ms 16 4 5s134ms 1s283ms 17 10 12s916ms 1s291ms 18 4 5s168ms 1s292ms 19 4 5s234ms 1s308ms 20 8 10s455ms 1s306ms 21 10 12s955ms 1s295ms 22 7 9s178ms 1s311ms 23 4 5s97ms 1s274ms Jun 28 00 2 2s591ms 1s295ms 01 2 2s705ms 1s352ms 02 2 2s613ms 1s306ms 03 2 2s599ms 1s299ms 04 7 9s265ms 1s323ms 05 5 6s723ms 1s344ms 06 2 2s574ms 1s287ms 08 2 2s757ms 1s378ms 09 4 5s259ms 1s314ms 10 6 7s736ms 1s289ms 11 1 1s298ms 1s298ms 12 1 1s332ms 1s332ms 13 6 7s810ms 1s301ms 14 1 1s239ms 1s239ms 15 4 5s287ms 1s321ms 16 4 5s161ms 1s290ms 18 3 3s900ms 1s300ms 19 4 5s152ms 1s288ms 20 3 3s792ms 1s264ms 21 4 5s43ms 1s260ms 22 9 11s766ms 1s307ms 23 6 7s673ms 1s278ms Jun 29 00 1 1s311ms 1s311ms 01 3 3s836ms 1s278ms 02 8 10s326ms 1s290ms 03 8 10s274ms 1s284ms 04 3 3s928ms 1s309ms 05 8 10s285ms 1s285ms 06 4 5s140ms 1s285ms 07 3 3s781ms 1s260ms 08 2 2s565ms 1s282ms 09 3 3s921ms 1s307ms 10 2 2s549ms 1s274ms 11 4 5s152ms 1s288ms 12 1 1s263ms 1s263ms 13 5 6s565ms 1s313ms 14 1 1s327ms 1s327ms 15 3 3s925ms 1s308ms 16 3 3s865ms 1s288ms 17 4 5s188ms 1s297ms 18 4 5s1ms 1s250ms 19 4 5s29ms 1s257ms 20 3 3s731ms 1s243ms 21 3 3s866ms 1s288ms 22 6 7s624ms 1s270ms 23 8 10s447ms 1s305ms [ User: pubeu - Total duration: 5m54s - Times executed: 275 ]
[ User: qaeu - Total duration: 2s849ms - Times executed: 2 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1220634') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1220634') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-06-25 23:27:48 Duration: 2s326ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1208796') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1208796') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-06-23 00:33:29 Duration: 1s574ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1218437') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1218437') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-06-25 02:36:45 Duration: 1s560ms Database: ctdprd51 User: pubeu Bind query: yes
3 291 23m40s 1s5ms 22s236ms 4s882ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jun 23 00 1 1s218ms 1s218ms 03 1 2s604ms 2s604ms 05 1 2s574ms 2s574ms 08 2 10s520ms 5s260ms 09 1 1s357ms 1s357ms 10 1 1s239ms 1s239ms 11 1 2s406ms 2s406ms 13 17 1m31s 5s365ms 15 1 1s302ms 1s302ms 18 1 1s349ms 1s349ms 21 3 7s725ms 2s575ms 22 2 7s13ms 3s506ms Jun 24 06 1 2s402ms 2s402ms 07 1 2s337ms 2s337ms 08 2 2s844ms 1s422ms 09 4 5s524ms 1s381ms 10 1 1s436ms 1s436ms 11 2 2s396ms 1s198ms 14 2 4s773ms 2s386ms 16 1 1s235ms 1s235ms 17 8 20s139ms 2s517ms 18 1 1s787ms 1s787ms 20 2 7s237ms 3s618ms 22 1 3s118ms 3s118ms 23 1 1s468ms 1s468ms Jun 25 02 1 1s148ms 1s148ms 04 1 1s484ms 1s484ms 05 2 7s686ms 3s843ms 07 1 4s746ms 4s746ms 08 3 7s282ms 2s427ms 09 1 2s877ms 2s877ms 10 1 1s173ms 1s173ms 11 1 1s211ms 1s211ms 12 1 3s802ms 3s802ms 15 1 2s376ms 2s376ms 16 1 1s165ms 1s165ms 17 2 2s738ms 1s369ms 18 1 1s218ms 1s218ms 23 3 6s685ms 2s228ms Jun 26 00 1 2s389ms 2s389ms 02 1 1s108ms 1s108ms 09 114 12m41s 6s682ms 10 2 4s946ms 2s473ms 15 1 1s383ms 1s383ms 19 1 2s231ms 2s231ms 21 45 4m15s 5s672ms 22 2 4s437ms 2s218ms Jun 27 00 1 4s673ms 4s673ms 01 1 2s214ms 2s214ms 04 3 9s163ms 3s54ms 06 8 20s468ms 2s558ms 07 5 28s302ms 5s660ms 08 2 4s729ms 2s364ms 10 1 4s995ms 4s995ms 17 1 1s370ms 1s370ms 18 1 1s164ms 1s164ms 19 1 1s265ms 1s265ms 22 1 2s769ms 2s769ms 23 1 1s975ms 1s975ms Jun 28 02 1 1s195ms 1s195ms 04 1 1s385ms 1s385ms 05 2 10s211ms 5s105ms 06 3 12s612ms 4s204ms 08 1 2s258ms 2s258ms 09 3 12s381ms 4s127ms 15 1 4s939ms 4s939ms Jun 29 05 1 5s895ms 5s895ms 09 3 9s588ms 3s196ms 18 1 2s173ms 2s173ms 21 2 8s687ms 4s343ms [ User: pubeu - Total duration: 9m3s - Times executed: 113 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2074152') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-06-26 09:44:08 Duration: 22s236ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2080955') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-06-26 09:44:07 Duration: 21s513ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2068897') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-06-26 09:44:00 Duration: 20s678ms Bind query: yes
4 246 16m27s 3s807ms 6s341ms 4s15ms select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jun 23 02 3 11s995ms 3s998ms 03 1 3s939ms 3s939ms 04 1 3s953ms 3s953ms 05 10 39s47ms 3s904ms 06 3 14s230ms 4s743ms 07 3 11s876ms 3s958ms 09 4 17s96ms 4s274ms 10 3 11s761ms 3s920ms 12 2 7s791ms 3s895ms 16 3 11s801ms 3s933ms 22 1 3s947ms 3s947ms 23 1 3s921ms 3s921ms Jun 24 01 2 9s596ms 4s798ms 03 4 15s765ms 3s941ms 04 4 15s829ms 3s957ms 05 1 5s337ms 5s337ms 06 6 23s514ms 3s919ms 07 2 7s668ms 3s834ms 08 1 3s855ms 3s855ms 09 1 3s876ms 3s876ms 10 1 3s902ms 3s902ms 11 1 3s997ms 3s997ms 14 2 9s124ms 4s562ms 15 3 11s789ms 3s929ms 16 2 7s822ms 3s911ms 17 3 12s175ms 4s58ms 19 3 11s685ms 3s895ms 20 1 3s894ms 3s894ms 21 1 4s319ms 4s319ms 22 3 11s902ms 3s967ms Jun 25 00 1 3s952ms 3s952ms 01 3 11s796ms 3s932ms 02 5 22s259ms 4s451ms 03 7 27s666ms 3s952ms 04 2 7s793ms 3s896ms 05 2 7s762ms 3s881ms 06 1 3s884ms 3s884ms 08 1 5s199ms 5s199ms 09 4 15s832ms 3s958ms 10 3 11s838ms 3s946ms 11 1 3s850ms 3s850ms 12 2 7s805ms 3s902ms 14 5 19s966ms 3s993ms 15 2 7s821ms 3s910ms 17 1 3s972ms 3s972ms 20 2 9s195ms 4s597ms 23 1 3s849ms 3s849ms Jun 26 01 2 7s913ms 3s956ms 02 1 3s883ms 3s883ms 03 3 11s831ms 3s943ms 05 2 7s789ms 3s894ms 07 2 7s776ms 3s888ms 08 5 19s705ms 3s941ms 09 3 11s943ms 3s981ms 10 1 3s921ms 3s921ms 12 1 3s833ms 3s833ms 13 2 7s842ms 3s921ms 15 2 7s876ms 3s938ms 18 2 7s926ms 3s963ms 23 1 3s894ms 3s894ms Jun 27 01 1 4s171ms 4s171ms 02 3 13s230ms 4s410ms 03 2 8s476ms 4s238ms 05 1 3s987ms 3s987ms 07 3 11s860ms 3s953ms 08 4 16s66ms 4s16ms 10 2 7s876ms 3s938ms 11 4 15s913ms 3s978ms 13 1 3s899ms 3s899ms 14 1 4s362ms 4s362ms 15 2 7s986ms 3s993ms 16 2 8s21ms 4s10ms 18 1 4s24ms 4s24ms 20 2 7s771ms 3s885ms 22 2 7s804ms 3s902ms Jun 28 01 1 3s860ms 3s860ms 03 4 15s779ms 3s944ms 04 3 11s701ms 3s900ms 05 1 3s972ms 3s972ms 06 1 3s921ms 3s921ms 07 2 8s68ms 4s34ms 08 5 19s613ms 3s922ms 09 2 7s876ms 3s938ms 10 3 11s776ms 3s925ms 11 2 7s871ms 3s935ms 14 2 7s979ms 3s989ms 15 2 7s949ms 3s974ms 17 1 3s951ms 3s951ms 21 1 3s996ms 3s996ms 23 1 3s984ms 3s984ms Jun 29 00 1 3s925ms 3s925ms 04 2 8s71ms 4s35ms 05 15 1m 4s18ms 06 9 35s852ms 3s983ms 07 3 11s931ms 3s977ms 10 1 3s888ms 3s888ms 11 1 3s958ms 3s958ms 12 2 8s191ms 4s95ms 15 2 8s165ms 4s82ms 16 1 3s903ms 3s903ms 23 1 3s941ms 3s941ms [ User: pubeu - Total duration: 7m - Times executed: 105 ]
[ User: qaeu - Total duration: 8s524ms - Times executed: 2 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1255421') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1255421') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-06-23 06:25:53 Duration: 6s341ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1393298') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1393298') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-06-25 02:37:46 Duration: 5s913ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1416482') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1416482') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-06-24 01:21:58 Duration: 5s417ms Bind query: yes
5 243 5m32s 1s196ms 2s889ms 1s368ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or receptorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jun 23 00 2 2s534ms 1s267ms 01 1 1s271ms 1s271ms 02 1 1s301ms 1s301ms 03 3 3s983ms 1s327ms 04 1 1s311ms 1s311ms 05 5 6s945ms 1s389ms 06 3 3s852ms 1s284ms 07 1 1s290ms 1s290ms 08 1 1s349ms 1s349ms 09 1 1s337ms 1s337ms 10 1 1s312ms 1s312ms 12 1 1s281ms 1s281ms 13 3 4s143ms 1s381ms 14 3 3s751ms 1s250ms 16 3 3s730ms 1s243ms 17 2 2s487ms 1s243ms 18 1 1s251ms 1s251ms 19 1 1s294ms 1s294ms 20 2 2s661ms 1s330ms 22 2 2s627ms 1s313ms 23 1 1s298ms 1s298ms Jun 24 01 2 2s973ms 1s486ms 02 2 2s573ms 1s286ms 03 3 3s945ms 1s315ms 04 1 1s303ms 1s303ms 05 4 5s439ms 1s359ms 07 2 2s551ms 1s275ms 12 2 2s572ms 1s286ms 14 3 3s922ms 1s307ms 15 5 6s549ms 1s309ms 17 4 5s120ms 1s280ms 18 1 1s283ms 1s283ms 19 3 4s876ms 1s625ms 20 2 2s522ms 1s261ms 21 2 2s536ms 1s268ms 22 3 3s960ms 1s320ms 23 3 3s981ms 1s327ms Jun 25 01 1 1s367ms 1s367ms 02 1 1s315ms 1s315ms 03 1 1s322ms 1s322ms 05 2 2s918ms 1s459ms 06 1 1s296ms 1s296ms 08 3 3s859ms 1s286ms 09 1 1s307ms 1s307ms 10 1 1s291ms 1s291ms 11 4 5s207ms 1s301ms 12 1 1s302ms 1s302ms 14 1 1s273ms 1s273ms 15 1 1s349ms 1s349ms 17 2 2s549ms 1s274ms 19 3 4s38ms 1s346ms 20 1 1s631ms 1s631ms 22 2 2s720ms 1s360ms 23 3 3s763ms 1s254ms Jun 26 01 3 4s45ms 1s348ms 03 2 2s571ms 1s285ms 05 3 4s213ms 1s404ms 07 1 1s246ms 1s246ms 09 16 23s826ms 1s489ms 10 2 2s556ms 1s278ms 11 2 2s608ms 1s304ms 12 1 1s317ms 1s317ms 15 2 2s612ms 1s306ms 16 2 2s671ms 1s335ms 18 1 1s305ms 1s305ms 20 2 2s438ms 1s219ms 21 20 33s523ms 1s676ms 22 2 2s581ms 1s290ms 23 1 1s295ms 1s295ms Jun 27 00 1 1s315ms 1s315ms 01 1 1s225ms 1s225ms 02 3 4s12ms 1s337ms 03 1 1s207ms 1s207ms 04 2 3s32ms 1s516ms 05 3 4s310ms 1s436ms 07 4 5s271ms 1s317ms 08 1 1s353ms 1s353ms 09 1 1s311ms 1s311ms 10 1 1s515ms 1s515ms 11 2 2s723ms 1s361ms 19 1 1s371ms 1s371ms 20 3 3s909ms 1s303ms 22 3 4s15ms 1s338ms 23 1 1s298ms 1s298ms Jun 28 00 1 1s332ms 1s332ms 02 1 1s323ms 1s323ms 05 3 4s194ms 1s398ms 06 1 1s355ms 1s355ms 08 3 4s10ms 1s336ms 10 3 3s942ms 1s314ms 11 1 1s359ms 1s359ms 12 1 1s303ms 1s303ms 14 1 1s522ms 1s522ms 15 2 2s798ms 1s399ms 16 1 1s300ms 1s300ms 18 1 1s319ms 1s319ms 19 2 2s690ms 1s345ms 20 1 1s294ms 1s294ms 22 1 1s309ms 1s309ms 23 1 1s443ms 1s443ms Jun 29 00 1 1s299ms 1s299ms 02 3 3s998ms 1s332ms 03 1 1s317ms 1s317ms 04 1 1s317ms 1s317ms 05 2 2s832ms 1s416ms 07 2 2s557ms 1s278ms 08 1 1s322ms 1s322ms 11 2 2s671ms 1s335ms 12 1 1s311ms 1s311ms 14 1 1s380ms 1s380ms 21 2 2s525ms 1s262ms 22 2 2s597ms 1s298ms 23 2 2s549ms 1s274ms [ User: pubeu - Total duration: 1m53s - Times executed: 83 ]
[ User: qaeu - Total duration: 4s156ms - Times executed: 3 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2078909') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2078909') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-06-26 09:35:36 Duration: 2s889ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2078909') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2078909') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-06-26 21:34:11 Duration: 2s630ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2068611') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2068611') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-06-26 21:34:52 Duration: 2s603ms Database: ctdprd51 User: pubeu Bind query: yes
6 221 48m12s 2s559ms 32m13s 13s89ms select g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(r.acc_txt, ? order by r.acc_txt) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id group by g.nm, g.acc_txt, d.nm, d.acc_db_cd || ? || d.acc_txt, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by g.nm, d.nm;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jun 27 10 164 44m5s 16s133ms 11 57 4m6s 4s331ms [ User: qaeu - Total duration: 32m13s - Times executed: 1 ]
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-06-27 10:33:26 Duration: 32m13s Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-06-27 10:52:10 Duration: 5s740ms Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-06-27 10:39:28 Duration: 5s629ms Bind query: yes
7 216 16m15s 1s 7s763ms 4s517ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jun 23 00 2 10s381ms 5s190ms 02 4 20s43ms 5s10ms 03 2 9s962ms 4s981ms 05 3 11s744ms 3s914ms 06 1 5s51ms 5s51ms 08 1 5s155ms 5s155ms 12 2 5s930ms 2s965ms 15 1 5s590ms 5s590ms 16 1 5s227ms 5s227ms 18 1 5s575ms 5s575ms 22 1 5s225ms 5s225ms 23 3 16s425ms 5s475ms Jun 24 01 2 10s632ms 5s316ms 03 2 6s208ms 3s104ms 04 2 10s253ms 5s126ms 06 1 5s243ms 5s243ms 07 2 10s39ms 5s19ms 08 1 4s803ms 4s803ms 11 4 7s882ms 1s970ms 12 2 10s521ms 5s260ms 14 4 19s307ms 4s826ms 15 1 1s48ms 1s48ms 16 4 21s201ms 5s300ms 17 2 9s971ms 4s985ms 19 1 4s951ms 4s951ms 20 2 6s93ms 3s46ms 22 2 6s86ms 3s43ms 23 1 4s894ms 4s894ms Jun 25 00 2 11s182ms 5s591ms 01 2 6s255ms 3s127ms 03 1 1s10ms 1s10ms 04 4 17s177ms 4s294ms 05 3 7s616ms 2s538ms 06 2 10s789ms 5s394ms 07 1 5s596ms 5s596ms 08 1 5s358ms 5s358ms 09 1 1s16ms 1s16ms 10 1 5s528ms 5s528ms 11 1 5s251ms 5s251ms 13 1 5s12ms 5s12ms 14 2 6s100ms 3s50ms 15 1 1s29ms 1s29ms 16 2 10s808ms 5s404ms 17 2 6s71ms 3s35ms 18 1 4s877ms 4s877ms 19 1 1s47ms 1s47ms 20 2 5s980ms 2s990ms 23 2 10s687ms 5s343ms Jun 26 02 1 5s546ms 5s546ms 03 1 5s209ms 5s209ms 05 1 4s931ms 4s931ms 06 2 6s405ms 3s202ms 08 1 5s445ms 5s445ms 09 13 1m10s 5s384ms 11 3 10s801ms 3s600ms 12 3 11s769ms 3s923ms 13 3 16s545ms 5s515ms 14 3 7s639ms 2s546ms 15 1 4s814ms 4s814ms 16 2 10s762ms 5s381ms 18 2 6s143ms 3s71ms 20 2 6s892ms 3s446ms 21 11 57s553ms 5s232ms 22 2 8s128ms 4s64ms Jun 27 01 3 15s885ms 5s295ms 02 2 8s276ms 4s138ms 03 3 15s757ms 5s252ms 04 1 4s748ms 4s748ms 07 1 4s865ms 4s865ms 10 1 7s647ms 7s647ms 13 1 5s328ms 5s328ms 14 3 15s117ms 5s39ms 15 1 5s518ms 5s518ms 16 4 20s231ms 5s57ms 17 3 15s560ms 5s186ms 21 1 5s524ms 5s524ms Jun 28 00 2 10s849ms 5s424ms 02 1 5s300ms 5s300ms 03 1 5s9ms 5s9ms 04 1 5s126ms 5s126ms 08 1 4s971ms 4s971ms 09 4 21s746ms 5s436ms 10 1 5s189ms 5s189ms 11 4 20s783ms 5s195ms 14 2 10s709ms 5s354ms 17 1 1s18ms 1s18ms 18 2 10s876ms 5s438ms 20 1 5s269ms 5s269ms 21 1 1s24ms 1s24ms Jun 29 01 1 1s36ms 1s36ms 03 1 1s39ms 1s39ms 04 5 27s349ms 5s469ms 05 8 41s740ms 5s217ms 06 1 1s26ms 1s26ms 07 2 6s395ms 3s197ms 09 1 1s84ms 1s84ms 10 1 5s346ms 5s346ms 11 1 5s404ms 5s404ms 12 3 16s45ms 5s348ms 15 2 10s737ms 5s368ms 17 1 5s298ms 5s298ms 19 3 7s534ms 2s511ms 23 1 1s2ms 1s2ms [ User: pubeu - Total duration: 7m22s - Times executed: 98 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1254557' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-06-26 09:25:05 Duration: 7s763ms Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1254557' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-06-27 10:33:57 Duration: 7s647ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1335486' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-06-27 02:34:11 Duration: 7s243ms Bind query: yes
8 149 6m58s 1s2ms 9s538ms 2s809ms select count(*) from gene_disease gd where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?);Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jun 26 09 101 5m24s 3s211ms 21 48 1m34s 1s961ms [ User: pubeu - Total duration: 1m2s - Times executed: 25 ]
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SELECT /* DiseaseGeneAssnsDAO.rowCount */ COUNT(*) FROM gene_disease gd WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2076012');
Date: 2024-06-26 09:43:55 Duration: 9s538ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO.rowCount */ COUNT(*) FROM gene_disease gd WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2073677');
Date: 2024-06-26 09:43:59 Duration: 9s161ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO.rowCount */ COUNT(*) FROM gene_disease gd WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2072917');
Date: 2024-06-26 09:23:55 Duration: 8s807ms Bind query: yes
9 128 7m54s 1s68ms 28s629ms 3s703ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jun 23 07 1 5s413ms 5s413ms 08 1 1s425ms 1s425ms 09 1 1s932ms 1s932ms 15 1 11s235ms 11s235ms 16 1 1s301ms 1s301ms 20 1 2s105ms 2s105ms Jun 24 03 1 1s521ms 1s521ms 06 1 1s544ms 1s544ms 08 2 5s755ms 2s877ms 09 1 2s460ms 2s460ms 10 3 7s334ms 2s444ms 12 1 3s336ms 3s336ms 19 2 2s693ms 1s346ms 20 1 1s493ms 1s493ms Jun 25 02 52 1m44s 2s12ms 08 1 1s359ms 1s359ms 09 7 11s415ms 1s630ms 15 2 3s115ms 1s557ms 17 1 3s721ms 3s721ms 18 3 3s675ms 1s225ms 19 1 1s544ms 1s544ms 20 1 2s27ms 2s27ms 23 1 2s754ms 2s754ms Jun 26 06 1 1s478ms 1s478ms 10 5 8s8ms 1s601ms 11 4 6s284ms 1s571ms 13 2 2s672ms 1s336ms 18 1 1s163ms 1s163ms 19 1 1s593ms 1s593ms 22 1 1s552ms 1s552ms Jun 27 06 3 1m19s 26s462ms 08 8 2m34s 19s330ms 09 1 1s873ms 1s873ms 18 2 3s85ms 1s542ms Jun 28 06 1 1s574ms 1s574ms 08 4 4s443ms 1s110ms 11 1 1s110ms 1s110ms 17 1 1s114ms 1s114ms 18 1 1s125ms 1s125ms 19 1 1s580ms 1s580ms 23 1 2s729ms 2s729ms Jun 29 09 1 1s920ms 1s920ms 10 1 12s880ms 12s880ms [ User: pubeu - Total duration: 4m41s - Times executed: 66 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2080955') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-06-27 08:08:07 Duration: 28s629ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2080955') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-06-27 06:39:13 Duration: 27s493ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2080955') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-06-27 06:38:00 Duration: 26s507ms Bind query: yes
10 111 2m34s 1s325ms 1s517ms 1s390ms select t.nm, t.nm_html nmhtml, t.secondary_nm secondarynm, t.acc_txt acc, ? || t.nm accquerystr, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term t where t.object_type_id = ? and regexp_replace(upper(substring(t.nm, ?, ?)), ?, ?) = ? order by t.nm_sort limit ?;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jun 23 00 1 1s337ms 1s337ms 01 2 2s719ms 1s359ms 05 6 8s268ms 1s378ms 06 1 1s382ms 1s382ms 09 2 2s745ms 1s372ms 10 2 2s769ms 1s384ms 13 2 2s750ms 1s375ms Jun 24 02 1 1s386ms 1s386ms 05 3 4s115ms 1s371ms 10 1 1s396ms 1s396ms 22 1 1s336ms 1s336ms Jun 25 04 2 2s723ms 1s361ms 05 3 4s223ms 1s407ms 10 1 1s416ms 1s416ms 14 1 1s416ms 1s416ms Jun 26 03 2 2s772ms 1s386ms 04 1 1s327ms 1s327ms 05 2 2s819ms 1s409ms 09 25 34s591ms 1s383ms 10 1 1s393ms 1s393ms 11 1 1s392ms 1s392ms 12 1 1s412ms 1s412ms 17 1 1s429ms 1s429ms 19 3 4s184ms 1s394ms 21 2 2s886ms 1s443ms 22 1 1s375ms 1s375ms Jun 27 02 2 2s934ms 1s467ms 05 7 9s687ms 1s383ms 06 1 1s348ms 1s348ms 07 3 4s69ms 1s356ms 08 1 1s447ms 1s447ms 10 1 1s476ms 1s476ms 11 2 2s714ms 1s357ms 16 1 1s428ms 1s428ms 17 1 1s408ms 1s408ms 19 1 1s325ms 1s325ms 20 1 1s381ms 1s381ms 23 1 1s358ms 1s358ms Jun 28 01 1 1s425ms 1s425ms 02 1 1s447ms 1s447ms 05 2 2s873ms 1s436ms 06 5 6s897ms 1s379ms 08 1 1s332ms 1s332ms 11 1 1s404ms 1s404ms 13 1 1s348ms 1s348ms 15 1 1s384ms 1s384ms Jun 29 01 1 1s470ms 1s470ms 05 3 4s293ms 1s431ms 07 1 1s452ms 1s452ms 09 2 2s825ms 1s412ms [ User: pubeu - Total duration: 48s583ms - Times executed: 35 ]
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'M' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-06-26 09:22:30 Duration: 1s517ms Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'H' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-06-26 09:22:14 Duration: 1s498ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-06-27 02:32:38 Duration: 1s491ms Bind query: yes
11 90 9m31s 1s220ms 26s778ms 6s355ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ? offset ?;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jun 23 05 1 22s999ms 22s999ms 06 1 5s566ms 5s566ms 07 3 17s592ms 5s864ms 09 1 4s846ms 4s846ms 10 2 8s838ms 4s419ms 12 2 29s344ms 14s672ms 14 1 4s816ms 4s816ms 15 2 6s89ms 3s44ms 19 3 30s365ms 10s121ms 20 1 1s395ms 1s395ms 22 1 11s334ms 11s334ms 23 1 17s494ms 17s494ms Jun 24 02 1 5s639ms 5s639ms 03 3 18s778ms 6s259ms 04 1 6s557ms 6s557ms 07 3 33s703ms 11s234ms 08 1 4s941ms 4s941ms 09 1 4s630ms 4s630ms 12 2 12s736ms 6s368ms 15 1 5s458ms 5s458ms 16 2 31s311ms 15s655ms 17 2 19s301ms 9s650ms 20 1 1s405ms 1s405ms 21 2 21s704ms 10s852ms 22 1 1s610ms 1s610ms Jun 25 02 1 4s672ms 4s672ms 03 1 1s296ms 1s296ms 04 1 1s233ms 1s233ms 06 1 12s611ms 12s611ms 07 1 4s991ms 4s991ms 11 1 1s455ms 1s455ms 12 1 1s326ms 1s326ms 14 1 4s80ms 4s80ms 18 1 1s404ms 1s404ms 20 1 5s57ms 5s57ms 21 1 13s18ms 13s18ms 22 1 1s511ms 1s511ms 23 1 1s625ms 1s625ms Jun 26 02 1 1s257ms 1s257ms 03 1 1s547ms 1s547ms 04 1 6s431ms 6s431ms 14 2 23s891ms 11s945ms 18 1 1s366ms 1s366ms 20 1 2s783ms 2s783ms 22 1 1s284ms 1s284ms 23 1 18s847ms 18s847ms Jun 27 05 2 2s614ms 1s307ms 07 1 6s421ms 6s421ms 08 6 34s450ms 5s741ms 09 1 2s5ms 2s5ms 10 1 8s485ms 8s485ms 11 2 11s214ms 5s607ms 13 1 5s267ms 5s267ms 14 1 2s150ms 2s150ms 15 1 2s970ms 2s970ms 16 1 6s479ms 6s479ms 20 1 6s560ms 6s560ms Jun 28 10 1 6s127ms 6s127ms 12 1 7s863ms 7s863ms 14 1 3s15ms 3s15ms 20 1 14s700ms 14s700ms 23 1 1s276ms 1s276ms Jun 29 13 2 4s343ms 2s171ms 14 1 2s678ms 2s678ms 20 1 1s942ms 1s942ms 21 1 1s256ms 1s256ms [ User: pubeu - Total duration: 4m53s - Times executed: 41 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2074152') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 4288500;
Date: 2024-06-23 12:49:22 Duration: 26s778ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2070206') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 4432000;
Date: 2024-06-24 16:38:25 Duration: 26s612ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2080955') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 3751100;
Date: 2024-06-23 05:55:35 Duration: 22s999ms Bind query: yes
12 73 44m33s 1s11ms 6m27s 36s628ms select * from pgbulkload.pg_bulkload (?);Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jun 25 16 31 13m23s 25s924ms 17 9 7m52s 52s495ms Jun 26 17 6 1m7s 11s193ms 20 6 14m28s 2m24s 21 14 4m 17s204ms 22 4 3m18s 49s702ms 23 3 22s751ms 7s583ms [ User: load - Total duration: 13m34s - Times executed: 24 ]
[ Application: pg_bulkload - Total duration: 13m34s - Times executed: 24 ]
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.GENE_DISEASE_REFERENCE,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.log,parse-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.DUPE}');
Date: 2024-06-26 20:11:16 Duration: 6m27s Database: ctdprd51 User: load Application: pg_bulkload Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.DAG_PATH,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.log,parse-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.DUPE}');
Date: 2024-06-26 20:38:46 Duration: 5m12s Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=edit.DB_LINK,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.log,parse-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.DUPE}');
Date: 2024-06-25 16:46:47 Duration: 3m45s Bind query: yes
13 69 2m45s 1s37ms 7s334ms 2s404ms select e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, ( select string_agg(distinct stressorterm.nm || ? || ( select cd from object_type where id = stressorterm.object_type_id) || ? || stressorterm.nm_html || ? || stressorterm.acc_txt || ? || stressorterm.acc_db_cd, ?)) as stressoragents, ( select string_agg(distinct coalesce(receptorterm.nm, ?) || ? || coalesce(( select cd from object_type where id = receptorterm.object_type_id), ?) || ? || coalesce(receptorterm.nm_html, ?) || ? || coalesce(receptorterm.acc_txt, ?) || ? || coalesce(receptorterm.acc_db_cd, ?) || ? || receptor.description, ?)) as receptors, ( select string_agg(distinct country.nm, ?)) as studycountries, ( select string_agg(distinct location.locality_txt, ?)) as localities, ( select string_agg(distinct event.medium_nm || ? || coalesce(event.medium_term_acc_txt, ?), ?)) as assaymediums, ( select string_agg(distinct exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd, ?)) as assayedmarkers, ( select string_agg(distinct diseaseterm.nm || ? || ( select cd from object_type where id = diseaseterm.object_type_id) || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd, ?)) as diseases, ( select string_agg(distinct phenotypeterm.nm || ? || ( select cd from object_type where id = phenotypeterm.object_type_id) || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd, ?)) as phenotypes, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, re.author_summary summary, count(*) over () fullrowcount from exposure e inner join reference r on e.reference_id = r.id inner join exp_stressor stressor on e.exp_stressor_id = stressor.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join term receptorterm on receptor.term_id = receptorterm.id left outer join exp_event event on e.exp_event_id = event.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join exp_event_location location on e.exp_event_id = location.exp_event_id left outer join country on location.country_id = country.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id inner join reference_exp re on e.reference_id = re.reference_id left outer join exp_study_factor expstudyfactor on re.id = expstudyfactor.reference_exp_id where e.reference_id = any (array ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like ?) and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressoragents limit ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jun 23 06 1 2s915ms 2s915ms 09 1 2s923ms 2s923ms Jun 24 01 2 4s970ms 2s485ms 05 1 2s850ms 2s850ms 11 1 1s242ms 1s242ms 17 4 13s117ms 3s279ms 20 1 1s297ms 1s297ms Jun 25 06 1 1s309ms 1s309ms 08 1 2s958ms 2s958ms Jun 26 09 24 1m3s 2s648ms 11 1 1s318ms 1s318ms 15 1 1s325ms 1s325ms 16 1 2s872ms 2s872ms 21 21 47s557ms 2s264ms Jun 27 03 1 1s871ms 1s871ms 09 1 1s348ms 1s348ms 15 1 1s581ms 1s581ms 19 1 2s804ms 2s804ms Jun 28 08 1 1s300ms 1s300ms 21 1 2s950ms 2s950ms Jun 29 03 1 1s203ms 1s203ms 08 1 2s641ms 2s641ms [ User: pubeu - Total duration: 38s706ms - Times executed: 17 ]
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1387245') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1387245') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2024-06-26 09:25:05 Duration: 7s334ms Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1387245') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1387245') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2024-06-26 21:30:08 Duration: 5s635ms Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1387245') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1387245') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2024-06-26 09:34:44 Duration: 5s484ms Bind query: yes
14 66 2m38s 1s22ms 7s927ms 2s402ms select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where diseaseterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jun 24 05 1 1s29ms 1s29ms 17 1 1s33ms 1s33ms Jun 26 09 45 1m57s 2s602ms 21 16 34s593ms 2s162ms Jun 28 06 2 3s237ms 1s618ms 08 1 1s595ms 1s595ms [ User: pubeu - Total duration: 1m17s - Times executed: 28 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2073677') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-06-26 09:43:56 Duration: 7s927ms Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2068897') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-06-26 21:26:52 Duration: 7s784ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2068897') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-06-26 09:43:49 Duration: 7s44ms Bind query: yes
15 60 2m18s 1s50ms 7s984ms 2s300ms select c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposurereferencecount, case when cd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from chem_disease_axn a where a.chem_id = cd.chem_id and a.disease_id = cd.disease_id) else null end actiontypes from chem_disease cd inner join term c on cd.chem_id = c.id inner join term d on cd.disease_id = d.id where cd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, cd.network_score desc nulls last, d.nm_sort, c.nm_sort limit ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jun 26 09 47 1m51s 2s368ms 21 13 26s714ms 2s54ms [ User: pubeu - Total duration: 27s965ms - Times executed: 12 ]
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2068897') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2024-06-26 09:43:58 Duration: 7s984ms Bind query: yes
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2080955') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2024-06-26 09:43:47 Duration: 5s574ms Bind query: yes
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2080955') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2024-06-26 21:26:39 Duration: 5s25ms Bind query: yes
16 59 1m21s 1s316ms 2s166ms 1s375ms select coalesce(d.abbr_display, d.nm_display) nm # ?, d.description # ?, coalesce(d.abbr, d.nm) anchor # ?, get_homepage_url (d.id) url # ? from db d # ? where d.id in (# ? select l.db_id # ? from db_link l # ? where l.type_cd = ? # ? and l.object_type_id = ?) # ? order by ?;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jun 23 01 1 1s332ms 1s332ms 04 1 1s325ms 1s325ms 05 2 2s663ms 1s331ms 07 1 1s321ms 1s321ms Jun 24 04 1 1s320ms 1s320ms 05 2 2s674ms 1s337ms Jun 25 05 2 2s667ms 1s333ms 06 1 1s319ms 1s319ms 17 1 1s352ms 1s352ms 21 4 5s349ms 1s337ms 23 2 2s671ms 1s335ms Jun 26 05 2 2s674ms 1s337ms 09 10 13s358ms 1s335ms 16 1 1s334ms 1s334ms 17 1 1s424ms 1s424ms 21 6 8s917ms 1s486ms 23 2 3s513ms 1s756ms Jun 27 00 1 1s357ms 1s357ms 05 2 2s734ms 1s367ms 07 1 1s358ms 1s358ms 08 1 1s374ms 1s374ms 09 1 1s411ms 1s411ms 10 1 1s443ms 1s443ms Jun 28 02 1 1s353ms 1s353ms 05 2 2s683ms 1s341ms 15 1 1s336ms 1s336ms 22 1 1s373ms 1s373ms Jun 29 05 2 2s679ms 1s339ms 07 1 1s337ms 1s337ms 10 2 2s721ms 1s360ms 14 1 1s346ms 1s346ms 22 1 1s414ms 1s414ms [ User: pubeu - Total duration: 25s413ms - Times executed: 18 ]
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-06-26 23:18:57 Duration: 2s166ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-06-26 21:26:16 Duration: 1s792ms Bind query: yes
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-06-26 21:26:16 Duration: 1s742ms Database: ctdprd51 User: pubeu Bind query: yes
17 53 3h34m45s 1s459ms 17m44s 4m3s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jun 23 02 1 1s665ms 1s665ms 06 1 3m37s 3m37s 07 1 3m6s 3m6s 13 1 3m37s 3m37s 15 1 4m57s 4m57s 18 2 2s935ms 1s467ms Jun 24 02 1 1s631ms 1s631ms 06 2 7m26s 3m43s 19 3 10m35s 3m31s 20 1 1s694ms 1s694ms 22 1 1m18s 1m18s Jun 25 02 1 1s841ms 1s841ms 07 2 6m44s 3m22s 08 1 1s961ms 1s961ms 12 1 5m5s 5m5s 13 4 19m54s 4m58s 14 7 24m14s 3m27s 16 1 3m37s 3m37s 23 1 4m33s 4m33s Jun 26 02 1 2s55ms 2s55ms 06 1 3m37s 3m37s 09 5 35m48s 7m9s 10 1 17m28s 17m28s 14 1 2m25s 2m25s 21 3 26m6s 8m42s 22 1 1m20s 1m20s Jun 27 15 1 3m38s 3m38s Jun 28 00 1 17m9s 17m9s 07 1 3m36s 3m36s 09 1 3s165ms 3s165ms 22 1 1m18s 1m18s Jun 29 07 1 3m6s 3m6s 08 1 1s488ms 1s488ms [ User: pubeu - Total duration: 1h38m18s - Times executed: 29 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1233923') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-06-26 09:53:01 Duration: 17m44s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1233923') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-06-26 10:00:17 Duration: 17m28s Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1233923') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-06-26 21:49:51 Duration: 17m21s Bind query: yes
18 50 1m56s 1s2ms 4s155ms 2s323ms with recursive sub_node ( object_id, id, path, lvl ) as ( select n.object_id, n.id, array[n.nm_sort], ? from dag_node n where n.object_id = ? union all select n.object_id, n.id, cast(path || n.nm_sort as varchar(?)[]), sn.lvl + ? from dag_node n inner join sub_node sn on (n.parent_id = sn.id)) select distinct t.nm prinm, t.nm_html prinmhtml, t.secondary_nm secondarynm, t.acc_db_cd accdbcd, t.acc_txt termacc, t.is_leaf isleaf, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_genes hasgenes, sn.lvl, sn.path, max(sn.lvl) over () maxlvl, t.has_phenotypes hasphenotypes from sub_node sn inner join term t on sn.object_id = t.id where sn.lvl <= ? order by sn.path;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jun 23 05 4 8s800ms 2s200ms 17 1 1s913ms 1s913ms Jun 24 05 4 8s709ms 2s177ms 14 1 1s765ms 1s765ms 23 1 1s986ms 1s986ms Jun 25 05 3 7s687ms 2s562ms 13 1 1s891ms 1s891ms 14 1 1s883ms 1s883ms 17 3 7s98ms 2s366ms Jun 26 05 4 8s679ms 2s169ms 09 1 3s402ms 3s402ms 21 1 4s155ms 4s155ms Jun 27 05 4 9s282ms 2s320ms 07 2 4s503ms 2s251ms 08 2 4s617ms 2s308ms 10 2 4s767ms 2s383ms 11 2 4s514ms 2s257ms 15 1 3s295ms 3s295ms Jun 28 05 4 8s712ms 2s178ms 10 1 3s253ms 3s253ms 15 2 4s555ms 2s277ms Jun 29 05 4 8s787ms 2s196ms 12 1 1s925ms 1s925ms [ User: pubeu - Total duration: 48s633ms - Times executed: 17 ]
[ User: qaeu - Total duration: 30s732ms - Times executed: 9 ]
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '649495' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 4 ORDER BY sn.path;
Date: 2024-06-26 21:32:23 Duration: 4s155ms Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '589967' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-06-27 10:33:04 Duration: 3s654ms Database: ctdprd51 User: qaeu Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '589314' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-06-27 05:35:12 Duration: 3s596ms Database: ctdprd51 User: pubeu Bind query: yes
19 44 1m5s 1s20ms 3s273ms 1s478ms select fg.nm fromgenesymbol, fg.acc_txt fromgeneacc, tg.nm togenesymbol, tg.acc_txt togeneacc, ft.nm fromtaxonnm, ft.secondary_nm fromtaxoncommonnm, ft.acc_txt fromtaxonacc, tt.nm totaxonnm, tt.secondary_nm totaxoncommonnm, tt.acc_txt totaxonacc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( select string_agg(ggt.throughput_txt, ? order by ggt.throughput_txt) from gene_gene_ref_throughput ggt where ggt.gene_gene_reference_id = ggr.id) throughput, count(*) over () fullrowcount from gene_gene_reference ggr inner join term fg on ggr.from_gene_id = fg.id inner join term tg on ggr.to_gene_id = tg.id inner join term ft on ggr.from_taxon_id = ft.id inner join term tt on ggr.to_taxon_id = tt.id where ggr.reference_id = ? order by fg.nm_sort, tg.nm_sort limit ?;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jun 23 05 3 3s253ms 1s84ms Jun 24 05 4 4s908ms 1s227ms 09 1 1s47ms 1s47ms 15 1 3s273ms 3s273ms Jun 25 02 1 3s206ms 3s206ms 05 4 5s127ms 1s281ms 06 1 1s62ms 1s62ms Jun 26 04 1 1s340ms 1s340ms 05 4 5s149ms 1s287ms 12 1 3s101ms 3s101ms Jun 27 05 4 4s886ms 1s221ms 07 1 1s250ms 1s250ms 08 1 1s59ms 1s59ms 09 1 3s162ms 3s162ms 10 2 2s754ms 1s377ms 11 2 2s888ms 1s444ms Jun 28 05 4 4s999ms 1s249ms 09 1 3s244ms 3s244ms 15 2 2s345ms 1s172ms Jun 29 05 4 5s811ms 1s452ms 21 1 1s195ms 1s195ms [ User: pubeu - Total duration: 16s5ms - Times executed: 8 ]
[ User: qaeu - Total duration: 10s529ms - Times executed: 8 ]
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SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '186380' ORDER BY fg.nm_sort, tg.nm_sort LIMIT 50;
Date: 2024-06-24 15:39:07 Duration: 3s273ms Bind query: yes
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SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '186380' ORDER BY fg.nm_sort, tg.nm_sort LIMIT 50;
Date: 2024-06-28 09:28:02 Duration: 3s244ms Bind query: yes
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SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '186380' ORDER BY fg.nm_sort, tg.nm_sort LIMIT 50;
Date: 2024-06-25 02:30:36 Duration: 3s206ms Database: ctdprd51 User: pubeu Bind query: yes
20 40 6m13s 1s11ms 47s624ms 9s339ms select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jun 23 08 1 1s336ms 1s336ms 18 1 1s387ms 1s387ms 22 1 2s182ms 2s182ms Jun 24 03 1 1s597ms 1s597ms 15 1 1s44ms 1s44ms 20 1 1s319ms 1s319ms Jun 26 06 1 1s15ms 1s15ms 09 10 2m23s 14s317ms 19 1 1s78ms 1s78ms 21 6 1m7s 11s239ms 23 3 1m33s 31s183ms Jun 27 01 1 4s499ms 4s499ms 09 1 1s400ms 1s400ms 10 1 1s170ms 1s170ms Jun 28 03 1 2s462ms 2s462ms 08 1 4s502ms 4s502ms 11 1 9s503ms 9s503ms 12 1 9s869ms 9s869ms 13 1 9s869ms 9s869ms 15 1 1s282ms 1s282ms 16 1 5s781ms 5s781ms 23 1 3s873ms 3s873ms Jun 29 02 1 1s214ms 1s214ms 19 1 3s34ms 3s34ms [ User: pubeu - Total duration: 3m12s - Times executed: 19 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1210111') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2024-06-26 23:45:55 Duration: 47s624ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1210111') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2024-06-26 23:45:55 Duration: 44s912ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1210111') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2024-06-26 09:35:44 Duration: 26s295ms Bind query: yes
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 1h56m7s 1h56m7s 1h56m7s 1 1h56m7s select pub2.maint_term_derive_data ();Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jun 27 05 1 1h56m7s 1h56m7s -
select pub2.maint_term_derive_data ();
Date: 2024-06-27 05:02:55 Duration: 1h56m7s Bind query: yes
2 1h36m6s 1h36m6s 1h36m6s 1 1h36m6s select pub2.maint_gene_chem_ref_gene_form_refresh ();Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jun 27 01 1 1h36m6s 1h36m6s -
select pub2.maint_gene_chem_ref_gene_form_refresh ();
Date: 2024-06-27 01:12:24 Duration: 1h36m6s Bind query: yes
3 59m17s 59m17s 59m17s 1 59m17s select maint_term_derive_nm_fts ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jun 27 02 1 59m17s 59m17s -
SELECT maint_term_derive_nm_fts ();
Date: 2024-06-27 02:14:31 Duration: 59m17s Bind query: yes
4 46m21s 46m21s 46m21s 1 46m21s vacuum full analyze;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jun 27 03 1 46m21s 46m21s -
VACUUM FULL ANALYZE;
Date: 2024-06-27 03:06:26 Duration: 46m21s Bind query: yes
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VACUUM FULL ANALYZE;
Date: 2024-06-27 02:20:19 Duration: 0ms
5 39m27s 39m27s 39m27s 1 39m27s select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.gene_go_annot gga, pub2.phenotype_term_reference ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jun 26 20 1 39m27s 39m27s -
select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.GENE_GO_ANNOT gga, pub2.PHENOTYPE_TERM_REFERENCE ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');
Date: 2024-06-26 20:00:13 Duration: 39m27s Bind query: yes
6 37m12s 37m12s 37m12s 1 37m12s select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.object_type where cd = ?), ptr.term_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.phenotype_term_reference ptr, pub2.phenotype_term_reference ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jun 26 19 1 37m12s 37m12s -
select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');
Date: 2024-06-26 19:20:40 Duration: 37m12s Bind query: yes
7 34m16s 34m16s 34m16s 1 34m16s select i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) from edit.ixn i, edit.reference_ixn r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in (...) order by i.id asc;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jun 26 17 1 34m16s 34m16s -
SELECT i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) FROM edit.IXN i, edit.REFERENCE_IXN r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in ('bogusName') order by i.id asc;
Date: 2024-06-26 17:50:22 Duration: 34m16s Bind query: yes
8 33m32s 33m32s 33m32s 1 33m32s select pub2.maint_cached_value_refresh_data_metrics ();Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jun 27 05 1 33m32s 33m32s -
select pub2.maint_cached_value_refresh_data_metrics ();
Date: 2024-06-27 05:46:19 Duration: 33m32s Bind query: yes
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select pub2.maint_cached_value_refresh_data_metrics ();
Date: 2024-06-27 05:42:08 Duration: 0ms
9 23m36s 23m36s 23m36s 1 23m36s update pub2.gene_disease gd set exposure_reference_qty = ( select count(distinct reference_id) from pub2.gene_disease_reference gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub2.reference r where has_exposures = true));Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jun 26 23 1 23m36s 23m36s -
update pub2.GENE_DISEASE gd set exposure_reference_qty = ( select count(distinct reference_id) from pub2.GENE_DISEASE_REFERENCE gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub2.REFERENCE r where has_exposures = true));
Date: 2024-06-26 23:31:10 Duration: 23m36s Bind query: yes
10 23m27s 23m27s 23m27s 1 23m27s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jun 29 19 1 23m27s 23m27s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-06-29 19:41:48 Duration: 23m27s
11 23m22s 23m22s 23m22s 1 23m22s insert into pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.gene_go_annot;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jun 26 17 1 23m22s 23m22s -
insert into pub2.GENE_GO_ANNOT (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.GENE_GO_ANNOT;
Date: 2024-06-26 17:07:59 Duration: 23m22s Bind query: yes
12 23m19s 23m19s 23m19s 1 23m19s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jun 29 19 1 23m19s 23m19s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-06-29 19:00:12 Duration: 23m19s
13 16m14s 16m24s 16m18s 7 1h54m12s select maint_query_logs_archive ();Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jun 23 00 1 16m14s 16m14s Jun 24 00 1 16m18s 16m18s Jun 25 00 1 16m18s 16m18s Jun 26 00 1 16m16s 16m16s Jun 27 00 1 16m24s 16m24s Jun 28 00 1 16m19s 16m19s Jun 29 00 1 16m20s 16m20s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-06-27 00:16:26 Duration: 16m24s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-06-29 00:16:21 Duration: 16m20s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-06-28 00:16:20 Duration: 16m19s
14 1s459ms 17m44s 4m3s 53 3h34m45s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jun 23 02 1 1s665ms 1s665ms 06 1 3m37s 3m37s 07 1 3m6s 3m6s 13 1 3m37s 3m37s 15 1 4m57s 4m57s 18 2 2s935ms 1s467ms Jun 24 02 1 1s631ms 1s631ms 06 2 7m26s 3m43s 19 3 10m35s 3m31s 20 1 1s694ms 1s694ms 22 1 1m18s 1m18s Jun 25 02 1 1s841ms 1s841ms 07 2 6m44s 3m22s 08 1 1s961ms 1s961ms 12 1 5m5s 5m5s 13 4 19m54s 4m58s 14 7 24m14s 3m27s 16 1 3m37s 3m37s 23 1 4m33s 4m33s Jun 26 02 1 2s55ms 2s55ms 06 1 3m37s 3m37s 09 5 35m48s 7m9s 10 1 17m28s 17m28s 14 1 2m25s 2m25s 21 3 26m6s 8m42s 22 1 1m20s 1m20s Jun 27 15 1 3m38s 3m38s Jun 28 00 1 17m9s 17m9s 07 1 3m36s 3m36s 09 1 3s165ms 3s165ms 22 1 1m18s 1m18s Jun 29 07 1 3m6s 3m6s 08 1 1s488ms 1s488ms [ User: pubeu - Total duration: 1h38m18s - Times executed: 29 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1233923') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-06-26 09:53:01 Duration: 17m44s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1233923') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-06-26 10:00:17 Duration: 17m28s Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1233923') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-06-26 21:49:51 Duration: 17m21s Bind query: yes
15 2m57s 5m17s 3m41s 11 40m36s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by referencecount desc limit ? offset ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jun 25 14 6 19m56s 3m19s 23 3 10m42s 3m34s Jun 26 00 2 9m56s 4m58s [ User: pubeu - Total duration: 34m41s - Times executed: 9 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1229069') and diseaseTerm.object_type_id = 3 ORDER BY referenceCount DESC LIMIT 50 OFFSET 50;
Date: 2024-06-26 00:30:46 Duration: 5m17s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1229068') and diseaseTerm.object_type_id = 3 ORDER BY referenceCount DESC LIMIT 50 OFFSET 50;
Date: 2024-06-25 14:40:38 Duration: 4m51s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1229068') and diseaseTerm.object_type_id = 3 ORDER BY referenceCount DESC LIMIT 50 OFFSET 50;
Date: 2024-06-25 23:31:42 Duration: 4m47s Database: ctdprd51 User: pubeu Bind query: yes
16 2s407ms 5m42s 1m2s 24 25m3s select r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refacc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, count(*) over () fullrowcount from reference r where r.id in ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) order by r.sort_txt limit ?;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jun 23 08 1 12s543ms 12s543ms 20 1 39s915ms 39s915ms 21 1 49s651ms 49s651ms Jun 24 23 1 29s295ms 29s295ms Jun 25 00 1 53s653ms 53s653ms 01 1 39s623ms 39s623ms 04 1 45s770ms 45s770ms 07 1 40s550ms 40s550ms 10 1 34s271ms 34s271ms 18 1 42s559ms 42s559ms 21 1 29s836ms 29s836ms Jun 26 06 1 2s539ms 2s539ms 11 2 42s95ms 21s47ms 14 1 2s707ms 2s707ms 18 1 49s228ms 49s228ms Jun 27 07 1 39s90ms 39s90ms 14 4 8m49s 2m12s 15 1 5m42s 5m42s Jun 28 19 1 35s553ms 35s553ms Jun 29 01 1 42s531ms 42s531ms [ User: qaeu - Total duration: 12m32s - Times executed: 4 ]
[ User: pubeu - Total duration: 4m10s - Times executed: 7 ]
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1426816')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-06-27 15:00:08 Duration: 5m42s Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1426816')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-06-27 14:56:34 Duration: 2m22s Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1426816')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-06-27 14:55:42 Duration: 2m15s Database: ctdprd51 User: qaeu Bind query: yes
17 1s11ms 6m27s 36s628ms 73 44m33s select * from pgbulkload.pg_bulkload (?);Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jun 25 16 31 13m23s 25s924ms 17 9 7m52s 52s495ms Jun 26 17 6 1m7s 11s193ms 20 6 14m28s 2m24s 21 14 4m 17s204ms 22 4 3m18s 49s702ms 23 3 22s751ms 7s583ms [ User: load - Total duration: 13m34s - Times executed: 24 ]
[ Application: pg_bulkload - Total duration: 13m34s - Times executed: 24 ]
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.GENE_DISEASE_REFERENCE,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.log,parse-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.DUPE}');
Date: 2024-06-26 20:11:16 Duration: 6m27s Database: ctdprd51 User: load Application: pg_bulkload Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.DAG_PATH,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.log,parse-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.DUPE}');
Date: 2024-06-26 20:38:46 Duration: 5m12s Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=edit.DB_LINK,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.log,parse-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.DUPE}');
Date: 2024-06-25 16:46:47 Duration: 3m45s Bind query: yes
18 2s559ms 32m13s 13s89ms 221 48m12s select g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(r.acc_txt, ? order by r.acc_txt) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id group by g.nm, g.acc_txt, d.nm, d.acc_db_cd || ? || d.acc_txt, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by g.nm, d.nm;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jun 27 10 164 44m5s 16s133ms 11 57 4m6s 4s331ms [ User: qaeu - Total duration: 32m13s - Times executed: 1 ]
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-06-27 10:33:26 Duration: 32m13s Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-06-27 10:52:10 Duration: 5s740ms Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-06-27 10:39:28 Duration: 5s629ms Bind query: yes
19 1s11ms 47s624ms 9s339ms 40 6m13s select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ?;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jun 23 08 1 1s336ms 1s336ms 18 1 1s387ms 1s387ms 22 1 2s182ms 2s182ms Jun 24 03 1 1s597ms 1s597ms 15 1 1s44ms 1s44ms 20 1 1s319ms 1s319ms Jun 26 06 1 1s15ms 1s15ms 09 10 2m23s 14s317ms 19 1 1s78ms 1s78ms 21 6 1m7s 11s239ms 23 3 1m33s 31s183ms Jun 27 01 1 4s499ms 4s499ms 09 1 1s400ms 1s400ms 10 1 1s170ms 1s170ms Jun 28 03 1 2s462ms 2s462ms 08 1 4s502ms 4s502ms 11 1 9s503ms 9s503ms 12 1 9s869ms 9s869ms 13 1 9s869ms 9s869ms 15 1 1s282ms 1s282ms 16 1 5s781ms 5s781ms 23 1 3s873ms 3s873ms Jun 29 02 1 1s214ms 1s214ms 19 1 3s34ms 3s34ms [ User: pubeu - Total duration: 3m12s - Times executed: 19 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1210111') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2024-06-26 23:45:55 Duration: 47s624ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1210111') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2024-06-26 23:45:55 Duration: 44s912ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1210111') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2024-06-26 09:35:44 Duration: 26s295ms Bind query: yes
20 1s220ms 26s778ms 6s355ms 90 9m31s select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ? offset ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jun 23 05 1 22s999ms 22s999ms 06 1 5s566ms 5s566ms 07 3 17s592ms 5s864ms 09 1 4s846ms 4s846ms 10 2 8s838ms 4s419ms 12 2 29s344ms 14s672ms 14 1 4s816ms 4s816ms 15 2 6s89ms 3s44ms 19 3 30s365ms 10s121ms 20 1 1s395ms 1s395ms 22 1 11s334ms 11s334ms 23 1 17s494ms 17s494ms Jun 24 02 1 5s639ms 5s639ms 03 3 18s778ms 6s259ms 04 1 6s557ms 6s557ms 07 3 33s703ms 11s234ms 08 1 4s941ms 4s941ms 09 1 4s630ms 4s630ms 12 2 12s736ms 6s368ms 15 1 5s458ms 5s458ms 16 2 31s311ms 15s655ms 17 2 19s301ms 9s650ms 20 1 1s405ms 1s405ms 21 2 21s704ms 10s852ms 22 1 1s610ms 1s610ms Jun 25 02 1 4s672ms 4s672ms 03 1 1s296ms 1s296ms 04 1 1s233ms 1s233ms 06 1 12s611ms 12s611ms 07 1 4s991ms 4s991ms 11 1 1s455ms 1s455ms 12 1 1s326ms 1s326ms 14 1 4s80ms 4s80ms 18 1 1s404ms 1s404ms 20 1 5s57ms 5s57ms 21 1 13s18ms 13s18ms 22 1 1s511ms 1s511ms 23 1 1s625ms 1s625ms Jun 26 02 1 1s257ms 1s257ms 03 1 1s547ms 1s547ms 04 1 6s431ms 6s431ms 14 2 23s891ms 11s945ms 18 1 1s366ms 1s366ms 20 1 2s783ms 2s783ms 22 1 1s284ms 1s284ms 23 1 18s847ms 18s847ms Jun 27 05 2 2s614ms 1s307ms 07 1 6s421ms 6s421ms 08 6 34s450ms 5s741ms 09 1 2s5ms 2s5ms 10 1 8s485ms 8s485ms 11 2 11s214ms 5s607ms 13 1 5s267ms 5s267ms 14 1 2s150ms 2s150ms 15 1 2s970ms 2s970ms 16 1 6s479ms 6s479ms 20 1 6s560ms 6s560ms Jun 28 10 1 6s127ms 6s127ms 12 1 7s863ms 7s863ms 14 1 3s15ms 3s15ms 20 1 14s700ms 14s700ms 23 1 1s276ms 1s276ms Jun 29 13 2 4s343ms 2s171ms 14 1 2s678ms 2s678ms 20 1 1s942ms 1s942ms 21 1 1s256ms 1s256ms [ User: pubeu - Total duration: 4m53s - Times executed: 41 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2074152') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 4288500;
Date: 2024-06-23 12:49:22 Duration: 26s778ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2070206') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 4432000;
Date: 2024-06-24 16:38:25 Duration: 26s612ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2080955') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 3751100;
Date: 2024-06-23 05:55:35 Duration: 22s999ms Bind query: yes
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 4s307ms 4 1s18ms 1s135ms 1s76ms SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' ||;Times Reported Time consuming bind #1
Day Hour Count Duration Avg duration Jun 29 09 2 2s36ms 1s18ms 21 2 2s270ms 1s135ms -
SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' ||;
Date: 2024-06-26 21:26:34 Duration: 1s135ms Database: postgres parameters: $1 = '2072917', $2 = '2072917'
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' ||;
Date: 2024-06-26 09:43:45 Duration: 1s18ms Database: postgres parameters: $1 = '2074152'
2 3s640ms 2 1s820ms 1s820ms 1s820ms select distinct ptr.phenotype_id, ptr.term_id, i.action_type_nm, i.action_type_cd, i.action_degree_type_nm, i.action_degree_type_cd from pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.IXN_AXN i where ptr.ixn_id = i.ixn_id;Times Reported Time consuming bind #2
Day Hour Count Duration Avg duration 22 2 3s640ms 1s820ms -
select distinct ptr.phenotype_id, ptr.term_id, i.action_type_nm, i.action_type_cd, i.action_degree_type_nm, i.action_degree_type_cd from pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.IXN_AXN i where ptr.ixn_id = i.ixn_id;
Date: 2024-06-26 23:00:42 Duration: 1s820ms Database: postgres
3 0ms 109 0ms 0ms 0ms ;Times Reported Time consuming bind #3
Day Hour Count Duration Avg duration Jun 23 15 4 0ms 0ms Jun 24 08 2 0ms 0ms 10 4 0ms 0ms 13 2 0ms 0ms 14 6 0ms 0ms 15 12 0ms 0ms 16 12 0ms 0ms Jun 25 00 1 0ms 0ms 09 8 0ms 0ms 10 4 0ms 0ms 13 2 0ms 0ms 17 2 0ms 0ms Jun 26 08 2 0ms 0ms 09 6 0ms 0ms Jun 27 01 1 0ms 0ms 04 2 0ms 0ms 05 2 0ms 0ms 09 4 0ms 0ms 11 2 0ms 0ms 12 6 0ms 0ms 14 4 0ms 0ms Jun 28 10 6 0ms 0ms 11 6 0ms 0ms 14 3 0ms 0ms 15 3 0ms 0ms Jun 29 16 3 0ms 0ms [ User: pubeu - Total duration: 1m46s - Times executed: 48 ]
[ User: qaeu - Total duration: 14s929ms - Times executed: 4 ]
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;
Date: Duration: 0ms Database: postgres parameters: $1 = '2029292', $2 = '2029292'
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Events
Log levels
Key values
- 90,052 Log entries
Events distribution
Key values
- 0 PANIC entries
- 14 FATAL entries
- 67 ERROR entries
- 1315 WARNING entries
Most Frequent Errors/Events
Key values
- 1,038 Max number of times the same event was reported
- 1,396 Total events found
Rank Times reported Error 1 1,038 WARNING: skipping "..." --- only table or database owner can vacuum it
Times Reported Most Frequent Error / Event #1
Day Hour Count Jun 27 02 1,038 2 224 WARNING: skipping "..." --- only superuser or database owner can vacuum it
Times Reported Most Frequent Error / Event #2
Day Hour Count Jun 27 02 224 3 43 WARNING: skipping "..." --- only superuser can vacuum it
Times Reported Most Frequent Error / Event #3
Day Hour Count Jun 27 02 43 4 34 LOG: could not receive data from client: Connection timed out
Times Reported Most Frequent Error / Event #4
Day Hour Count Jun 25 16 2 17 1 19 7 20 2 Jun 26 10 1 12 1 13 1 20 1 Jun 27 02 2 17 1 18 4 19 6 20 2 Jun 28 11 1 17 1 18 1 5 12 LOG: could not receive data from client: Connection reset by peer
Times Reported Most Frequent Error / Event #5
Day Hour Count Jun 25 15 1 Jun 26 10 2 Jun 27 07 3 08 2 13 4 6 9 FATAL: canceling authentication due to timeout
Times Reported Most Frequent Error / Event #6
Day Hour Count Jun 27 06 3 07 2 08 4 7 7 WARNING: there is no transaction in progress
Times Reported Most Frequent Error / Event #7
Day Hour Count Jun 25 15 1 Jun 27 02 2 05 4 8 5 FATAL: connection to client lost
Times Reported Most Frequent Error / Event #8
Day Hour Count Jun 26 09 1 10 1 21 1 Jun 27 07 1 Jun 28 00 1 - FATAL: connection to client lost
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Date: 2024-06-27 07:19:15
9 4 ERROR: syntax error at or near "..."
Times Reported Most Frequent Error / Event #9
Day Hour Count Jun 25 15 1 Jun 26 10 1 Jun 27 11 1 13 1 - ERROR: syntax error at or near "Update" at character 19
- ERROR: syntax error at or near "d" at character 1
- ERROR: syntax error at or near "select" at character 114
Statement: BEGIN TRANsaction Update exp_receptor set term_acc_db_id = 21 where term_acc_txt is not null and term_acc_db_id is null and object_type_id = 3
Date: 2024-06-25 15:26:04
Statement: d DESC LIMIT 100
Date: 2024-06-26 10:56:27 Database: ctdprd51 Application: pgAdmin 4 - CONN:1759786 User: editeu Remote:
Statement: select * from exp_event where exp_marker_term_nm is not null and exp_marker_acc_txt is null and (exp_event_id in select exp_event_id from exposure where reference_acc_txt='35751763')
Date: 2024-06-27 11:05:30
10 4 LOG: could not send data to client: Broken pipe
Times Reported Most Frequent Error / Event #10
Day Hour Count Jun 26 09 1 10 1 21 1 Jun 28 00 1 11 3 ERROR: column "..." does not exist
Times Reported Most Frequent Error / Event #11
Day Hour Count Jun 27 09 1 11 1 13 1 - ERROR: column "id" does not exist at character 62
- ERROR: column "exp_event_id" does not exist at character 99
- ERROR: column "exp_event_id" does not exist at character 31
Statement: select * from pub1.exp_event_project where id not in (select id from pub2.exp_event_project)
Date: 2024-06-27 09:10:34 Database: ctdprd51 Application: pgAdmin 4 - CONN:8643917 User: pub2 Remote:
Statement: select * from exp_event where exp_marker_term_nm is not null and exp_marker_acc_txt is null and exp_event_id in (select exp_event_id from exposure where reference_acc_txt='35751763')
Date: 2024-06-27 11:06:44
Statement: select * from exp_event where exp_event_id in (select exp_event_id from exposure where reference_acc_txt in ('35646058') )
Date: 2024-06-27 13:03:25
12 3 WARNING: is not a PostgreSQL server process
Times Reported Most Frequent Error / Event #12
Day Hour Count Jun 24 10 2 Jun 25 16 1 13 3 ERROR: syntax error at end of input
Times Reported Most Frequent Error / Event #13
Day Hour Count Jun 27 09 2 11 1 - ERROR: syntax error at end of input at character 467
- ERROR: syntax error at end of input at character 149
- ERROR: syntax error at end of input at character 184
Statement: --select * from pub1.exp_event_project p1 where p1.exp_event_id not in (select exp_event_id from pub2.exp_event_project) order by exp_event_id --select count(*) from pub2.exp_event_project select * from pub1.exp_receptor_race p1 where p1.exp_receptor_id not in (select exp_receptor_id from pub2.exp_receptor_race order by exp_receptor_id --select reference_acc_txt from pub1.exposure p1 where p1.reference_acc_txt not in (select reference_acc_txt from pub2.exposure)
Date: 2024-06-27 09:21:37
Statement: select * from pub1.exp_receptor_race p1 where p1.exp_receptor_id not in (select exp_receptor_id from pub2.exp_receptor_race order by exp_receptor_idselect * from exp_event where exp_marker_marker_term_nm is not null and exp_marker_term_nm_html is null
Date: 2024-06-27 09:22:08
Statement: select * from exp_event where exp_marker_term_nm is not null and exp_marker_acc_txt is null and (exp_event_id in (select exp_event_id from exposure where reference_acc_txt='35751763')
Date: 2024-06-27 11:05:55
14 1 ERROR: permission denied for table ...
Times Reported Most Frequent Error / Event #14
Day Hour Count Jun 25 17 1 - ERROR: permission denied for table term
Statement: begin transaction; update term set secondary_nm = '7461-02-1' where secondary_nm = '7461-02-1 (+-)-' and object_type_id = 2 and acc_txt = 'C014212'
Date: 2024-06-25 17:15:14
15 1 ERROR: missing FROM-clause entry for table "..."
Times Reported Most Frequent Error / Event #15
Day Hour Count Jun 27 09 1 - ERROR: missing FROM-clause entry for table "pub1" at character 44
Statement: select * from pub1.exp_event_project where pub1.project_nm not in (select project_nm from pub2.exp_event_project)
Date: 2024-06-27 09:12:26
16 1 ERROR: relation "..." does not exist
Times Reported Most Frequent Error / Event #16
Day Hour Count Jun 27 16 1 - ERROR: relation "pub2.reference_ixn" does not exist at character 15
Statement: select * from pub2.reference_ixn where ixn_id = 6835578
Date: 2024-06-27 16:18:11
17 1 ERROR: function get_ixn_prose(...) does not exist
Times Reported Most Frequent Error / Event #17
Day Hour Count Jun 26 10 1 - ERROR: function get_ixn_prose(integer) does not exist at character 66
Hint: No function matches the given name and argument types. You might need to add explicit type casts.
Statement: select reference_acc_txt ,taxon_acc_txt ,pubTerm.nm ,get_ixn_prose( ixn_id ) ,create_by ,create_tm from edit.reference_ixn ri ,pub1.term pubTerm where taxon_acc_txt not in ( select acc_txt from load.term where object_type_id = ( select id from edit.object_type where cd = 'taxon' ) ) and pubTerm.acc_txt = ri.taxon_acc_txt and object_type_id = ( select id from edit.object_type where cd = 'taxon' ) and taxon_acc_txt is not null and taxon_acc_txt <> ''Date: 2024-06-26 10:45:59 Database: ctdprd51 Application: pgAdmin 4 - CONN:3182627 User: load Remote:
18 1 ERROR: zero-length delimited identifier at or near """"
Times Reported Most Frequent Error / Event #18
Day Hour Count Jun 25 15 1 - ERROR: zero-length delimited identifier at or near """" at character 47
Statement: -- This is the AGGREGATE Report: select nm as ""Underlying Term Name"" ,acc_txt as ""Underlying Term Accession"" ,synonym ,reference_acc_txt ,notes ,create_by ,create_tm from edit.term_label where acc_txt not in ( select acc_txt from pub1.term ) order by acc_txt
Date: 2024-06-25 15:16:59 Database: ctdprd51 Application: pgAdmin 4 - CONN:4596324 User: edit Remote:
19 1 LOG: could not send data to client: Connection reset by peer
Times Reported Most Frequent Error / Event #19
Day Hour Count Jun 27 07 1 - ERROR: could not send data to client: Connection reset by peer
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Date: 2024-06-27 07:19:15 Database: ctdprd51 Application: User: pubeu Remote:
20 1 ERROR: unterminated quoted identifier at or near ""..."
Times Reported Most Frequent Error / Event #20
Day Hour Count Jun 27 09 1 - ERROR: unterminated quoted identifier at or near "" " at character 199
Statement: -- Should return 0 rows select cd, t.nm, t.nm_sort from pub2.term t ,pub2.object_type ot where upper( nm ) <> nm_sort and t.object_type_id = ot.id and cd <> 'pathway' order by cd, nm"select * from reference_ixn where ixn_id = 6835578
Date: 2024-06-27 09:28:04 Database: ctdprd51 Application: pgAdmin 4 - CONN:3182627 User: load Remote: