pgBadger-
Global information
- Generated on Sun Sep 1 04:15:12 2024
- Log file: /project/archive/log/postgres/dbprd51/postgresql.log-20240831
- Parsed 226,692 log entries in 11s
- Log start from 2024-08-25 00:00:01 to 2024-08-31 23:58:16
-
Overview
Global Stats
- 545 Number of unique normalized queries
- 4,180 Number of queries
- 20h31m14s Total query duration
- 2024-08-25 00:06:30 First query
- 2024-08-31 23:53:14 Last query
- 3 queries/s at 2024-08-29 23:34:44 Query peak
- 20h31m14s Total query duration
- 24s941ms Prepare/parse total duration
- 2s162ms Bind total duration
- 20h30m47s Execute total duration
- 1,387 Number of events
- 16 Number of unique normalized events
- 1,038 Max number of times the same event was reported
- 0 Number of cancellation
- 242 Total number of automatic vacuums
- 238 Total number of automatic analyzes
- 2,900 Number temporary file
- 1.00 GiB Max size of temporary file
- 192.37 MiB Average size of temporary file
- 18,720 Total number of sessions
- 153 sessions at 2024-08-28 00:23:47 Session peak
- 573d10h7m27s Total duration of sessions
- 44m6s Average duration of sessions
- 0 Average queries per session
- 3s946ms Average queries duration per session
- 44m2s Average idle time per session
- 18,720 Total number of connections
- 58 connections/s at 2024-08-31 20:03:34 Connection peak
- 3 Total number of databases
SQL Traffic
Key values
- 3 queries/s Query Peak
- 2024-08-29 23:34:44 Date
SELECT Traffic
Key values
- 3 queries/s Query Peak
- 2024-08-29 23:34:44 Date
INSERT/UPDATE/DELETE Traffic
Key values
- 1 queries/s Query Peak
- 2024-08-31 18:33:33 Date
Queries duration
Key values
- 20h31m14s Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Aug 25 00 10 0ms 16m28s 1m40s 1s214ms 1s326ms 16m33s 01 16 0ms 6s194ms 1s565ms 1s329ms 1s659ms 6s194ms 02 6 0ms 1s352ms 1s194ms 1s186ms 1s211ms 1s352ms 03 13 0ms 3s999ms 3s78ms 3s859ms 3s993ms 6s4ms 04 12 0ms 3s827ms 2s9ms 2s903ms 3s785ms 3s827ms 05 48 0ms 12s694ms 2s484ms 13s743ms 25s101ms 27s705ms 06 19 0ms 33s659ms 6s153ms 1s314ms 9s575ms 54s113ms 07 12 0ms 5s771ms 1s909ms 1s580ms 3s150ms 5s771ms 08 6 0ms 8s109ms 3s846ms 0ms 1s480ms 16s125ms 09 7 0ms 4s6ms 2s360ms 1s301ms 3s783ms 4s6ms 10 14 0ms 33s755ms 7s962ms 1s895ms 41s803ms 54s135ms 11 5 0ms 3s965ms 2s3ms 1s209ms 2s12ms 3s965ms 12 8 0ms 5s645ms 2s130ms 1s339ms 3s935ms 5s645ms 13 9 0ms 6s281ms 2s136ms 1s206ms 1s868ms 7s577ms 14 21 0ms 33s992ms 5s674ms 1s322ms 9s535ms 54s2ms 15 6 0ms 11s442ms 3s405ms 1s211ms 1s273ms 11s442ms 16 9 0ms 3s952ms 1s834ms 1s310ms 1s506ms 3s952ms 17 3 0ms 3s807ms 2s18ms 0ms 1s119ms 3s807ms 18 25 0ms 33s703ms 6s410ms 12s164ms 41s736ms 54s99ms 19 10 0ms 7s129ms 2s682ms 1s538ms 7s129ms 8s73ms 20 9 0ms 3s767ms 1s865ms 1s607ms 3s767ms 4s662ms 21 6 0ms 3s806ms 1s706ms 1s218ms 1s568ms 3s806ms 22 12 0ms 21s402ms 8s190ms 3s860ms 40s658ms 42s140ms 23 5 0ms 1s494ms 1s289ms 1s218ms 1s302ms 1s494ms Aug 26 00 10 0ms 16m29s 1m42s 3s814ms 15s46ms 16m34s 01 10 0ms 4s8ms 2s820ms 3s778ms 4s8ms 11s571ms 02 16 0ms 5s95ms 2s143ms 2s657ms 4s73ms 5s95ms 03 34 0ms 17s815ms 3s525ms 4s995ms 8s199ms 17s815ms 04 41 0ms 4s676ms 3s456ms 7s889ms 9s320ms 15s310ms 05 74 0ms 5s34ms 2s143ms 9s241ms 17s822ms 25s356ms 06 18 0ms 33s747ms 6s607ms 2s575ms 18s303ms 40s587ms 07 7 0ms 1s571ms 1s312ms 1s200ms 1s327ms 1s571ms 08 27 0ms 4s784ms 2s720ms 2s843ms 4s784ms 7s920ms 09 10 0ms 5s476ms 3s592ms 3s779ms 4s197ms 15s727ms 10 20 0ms 33s868ms 6s680ms 1s371ms 16s79ms 53s861ms 11 33 0ms 13s667ms 4s106ms 7s856ms 13s667ms 19s959ms 12 15 0ms 16s231ms 5s268ms 3s831ms 16s263ms 21s877ms 13 10 0ms 31s226ms 10s405ms 4s974ms 15s477ms 31s226ms 14 26 0ms 33s678ms 6s82ms 9s598ms 27s976ms 54s301ms 15 12 0ms 40s291ms 4s870ms 1s571ms 2s142ms 40s291ms 16 9 0ms 3m23s 24s470ms 1s240ms 3s919ms 3m23s 17 11 0ms 5s609ms 2s35ms 1s211ms 2s372ms 8s482ms 18 23 0ms 33s810ms 6s12ms 5s620ms 18s679ms 53s986ms 19 6 0ms 5s657ms 2s217ms 1s202ms 1s317ms 5s657ms 20 7 0ms 1s849ms 1s331ms 1s187ms 1s638ms 1s849ms 21 28 0ms 5s257ms 3s276ms 7s935ms 11s941ms 12s84ms 22 31 0ms 5s695ms 2s544ms 4s18ms 5s78ms 11s859ms 23 16 0ms 8s375ms 2s601ms 3s886ms 5s5ms 8s375ms Aug 27 00 9 0ms 16m36s 1m53s 1s303ms 5s52ms 16m41s 01 10 0ms 3s796ms 1s506ms 1s206ms 1s490ms 4s984ms 02 11 0ms 4s754ms 1s829ms 1s304ms 1s577ms 4s754ms 03 24 0ms 18s25ms 3s874ms 8s813ms 18s25ms 22s797ms 04 35 0ms 15s938ms 5s236ms 7s606ms 10s119ms 1m42s 05 49 0ms 26s13ms 2s801ms 12s757ms 21s831ms 26s13ms 06 21 0ms 33s797ms 5s970ms 3s253ms 12s498ms 53s957ms 07 16 0ms 41s107ms 4s522ms 4s222ms 5s46ms 42s242ms 08 12 0ms 7s74ms 2s27ms 1s379ms 3s207ms 7s74ms 09 20 0ms 5s724ms 1s834ms 3s627ms 4s92ms 9s585ms 10 40 0ms 33s625ms 6s825ms 25s440ms 28s805ms 54s125ms 11 16 0ms 19s178ms 6s413ms 11s527ms 18s923ms 19s178ms 12 9 0ms 39s180ms 6s870ms 1s895ms 4s865ms 39s180ms 13 17 0ms 13s556ms 6s338ms 3s885ms 22s345ms 34s819ms 14 57 0ms 3m51s 24s895ms 1m23s 1m32s 4m28s 15 30 0ms 1m34s 6s830ms 5s469ms 7s893ms 1m34s 16 14 0ms 4s788ms 1s731ms 1s315ms 4s55ms 4s788ms 17 19 0ms 11m43s 57s600ms 4s873ms 2m4s 11m54s 18 39 0ms 34m36s 1m48s 54s376ms 4m 34m47s 19 28 0ms 9m1s 27s659ms 37s346ms 38s194ms 9m1s 20 14 0ms 38m23s 2m46s 1s356ms 3s867ms 38m23s 21 60 0ms 40m23s 1m17s 1m53s 5m4s 40m23s 22 30 0ms 57s167ms 9s366ms 14s330ms 53s292ms 1m 23 34 0ms 12m26s 38s789ms 24s239ms 2m56s 12m26s Aug 28 00 53 0ms 28m17s 1m6s 1m22s 2m20s 28m17s 01 20 0ms 6s572ms 3s353ms 4s976ms 7s498ms 10s511ms 02 43 0ms 1h37m39s 2m22s 10s99ms 12s713ms 1h37m39s 03 32 0ms 1h1m8s 2m6s 6s130ms 58s198ms 1h1m19s 04 21 0ms 46m7s 2m14s 4s130ms 6s573ms 46m29s 05 64 0ms 21s382ms 2s960ms 9s522ms 20s829ms 35s143ms 06 33 0ms 1h57m12s 4m56s 41s973ms 8m56s 1h57m29s 07 26 0ms 41s211ms 3s673ms 2s828ms 7s639ms 41s211ms 08 19 0ms 15s166ms 3s692ms 4s83ms 5s166ms 15s783ms 09 41 0ms 21s437ms 4s257ms 9s242ms 23s499ms 26s585ms 10 60 0ms 33s699ms 4s617ms 28s817ms 35s360ms 54s30ms 11 57 0ms 1m18s 6s995ms 37s717ms 45s707ms 1m25s 12 232 0ms 33m4s 13s753ms 30s89ms 1m1s 33m26s 13 22 0ms 2m9s 14s848ms 9s338ms 19s514ms 2m15s 14 17 0ms 33s748ms 6s790ms 5s623ms 8s650ms 41s780ms 15 18 0ms 3s985ms 1s937ms 3s802ms 3s837ms 3s985ms 16 10 0ms 5s783ms 1s989ms 1s211ms 1s597ms 5s783ms 17 9 0ms 3s968ms 2s195ms 1s218ms 2s454ms 5s560ms 18 21 0ms 33s740ms 6s4ms 3s954ms 9s564ms 54s150ms 19 10 0ms 10s597ms 3s6ms 1s462ms 2s335ms 10s597ms 20 10 0ms 7s59ms 3s79ms 1s552ms 5s83ms 8s479ms 21 9 0ms 4s183ms 1s968ms 1s329ms 3s663ms 5s401ms 22 27 0ms 5s290ms 1s942ms 4s421ms 5s290ms 12s698ms 23 12 0ms 2m3s 12s338ms 2s332ms 3s852ms 2m3s Aug 29 00 13 0ms 16m30s 1m18s 2s175ms 4s10ms 16m36s 01 11 0ms 4s50ms 1s741ms 1s269ms 2s865ms 5s84ms 02 13 0ms 2m59s 15s897ms 3s841ms 5s57ms 2m59s 03 13 0ms 6s975ms 2s122ms 1s401ms 3s774ms 6s975ms 04 18 0ms 4s579ms 1s991ms 3s743ms 3s918ms 4s906ms 05 103 0ms 4s860ms 1s651ms 12s785ms 21s203ms 30s250ms 06 16 0ms 33s867ms 7s19ms 2s259ms 9s600ms 48s676ms 07 12 0ms 10s772ms 2s377ms 1s423ms 2s362ms 10s772ms 08 17 0ms 11s326ms 2s336ms 2s398ms 3s397ms 11s326ms 09 12 0ms 5s256ms 2s192ms 1s704ms 2s464ms 10s289ms 10 28 0ms 33s696ms 5s714ms 5s862ms 29s905ms 54s239ms 11 13 0ms 1s475ms 1s274ms 1s378ms 1s430ms 1s475ms 12 19 0ms 12s827ms 3s53ms 3s856ms 7s619ms 12s827ms 13 9 0ms 5s135ms 2s140ms 1s946ms 5s135ms 6s261ms 14 26 0ms 33s820ms 5s697ms 6s210ms 10s797ms 54s65ms 15 34 0ms 12s685ms 2s643ms 12s685ms 20s945ms 22s264ms 16 12 0ms 39s443ms 7s68ms 4s107ms 7s407ms 39s443ms 17 7 0ms 1s386ms 1s248ms 1s218ms 1s342ms 1s386ms 18 26 0ms 46s467ms 7s923ms 21s884ms 46s467ms 55s353ms 19 32 0ms 4s166ms 2s737ms 5s139ms 7s892ms 8s252ms 20 18 0ms 4s138ms 2s249ms 3s942ms 4s25ms 8s218ms 21 10 0ms 4s623ms 1s716ms 1s513ms 1s564ms 4s623ms 22 46 0ms 20s133ms 8s926ms 39s64ms 1m11s 1m56s 23 398 0ms 24s744ms 9s947ms 2m32s 3m 5m3s Aug 30 00 182 0ms 17m15s 15s692ms 1m50s 2m52s 17m21s 01 22 0ms 12s92ms 4s595ms 2s511ms 24s661ms 28s262ms 02 28 0ms 6s374ms 1s489ms 2s833ms 3s657ms 6s374ms 03 16 0ms 13s845ms 3s100ms 3s991ms 4s203ms 13s845ms 04 22 0ms 7s494ms 3s89ms 3s978ms 7s79ms 10s721ms 05 70 0ms 1m40s 5s248ms 23s538ms 35s479ms 1m40s 06 22 0ms 33s979ms 6s423ms 3s951ms 9s649ms 54s49ms 07 19 0ms 10s268ms 2s874ms 3s985ms 5s238ms 14s3ms 08 21 0ms 1m43s 7s998ms 4s335ms 7s244ms 1m43s 09 10 0ms 43s395ms 6s652ms 1s307ms 4s315ms 43s395ms 10 27 0ms 33s716ms 5s552ms 5s141ms 21s56ms 54s345ms 11 10 0ms 5s818ms 2s401ms 2s262ms 3s916ms 5s818ms 12 6 0ms 4s5ms 2s141ms 1s202ms 1s300ms 4s5ms 13 13 0ms 7s317ms 2s148ms 1s431ms 3s912ms 8s528ms 14 15 0ms 33s810ms 7s802ms 2s716ms 10s705ms 54s161ms 15 15 0ms 5s776ms 2s401ms 1s441ms 5s301ms 9s497ms 16 13 0ms 3s90ms 1s475ms 1s322ms 1s605ms 5s544ms 17 14 0ms 14s630ms 2s563ms 2s475ms 2s777ms 14s630ms 18 29 0ms 33s709ms 5s183ms 5s113ms 21s619ms 54s106ms 19 9 0ms 1s630ms 1s290ms 1s210ms 1s339ms 2s930ms 20 9 0ms 3s941ms 1s820ms 1s203ms 1s564ms 3s941ms 21 10 0ms 1s412ms 1s212ms 1s207ms 1s295ms 2s532ms 22 13 0ms 5s70ms 1s839ms 1s386ms 2s563ms 6s312ms 23 13 0ms 4s22ms 1s712ms 2s351ms 2s528ms 4s22ms Aug 31 00 18 0ms 16m32s 57s231ms 2s202ms 4s165ms 16m37s 01 7 0ms 4s142ms 1s755ms 1s223ms 1s565ms 4s142ms 02 17 0ms 5s104ms 1s861ms 2s387ms 4s111ms 5s170ms 03 30 0ms 5s459ms 3s482ms 5s379ms 8s26ms 11s663ms 04 30 0ms 13s714ms 3s358ms 5s176ms 13s714ms 33s841ms 05 50 0ms 4s407ms 2s79ms 4s385ms 16s2ms 23s671ms 06 9 0ms 1s832ms 1s307ms 1s210ms 1s314ms 3s250ms 07 17 0ms 6s39ms 2s547ms 3s939ms 4s153ms 9s942ms 08 15 0ms 4s14ms 2s2ms 1s550ms 3s898ms 4s14ms 09 16 0ms 1s322ms 1s224ms 1s315ms 2s333ms 2s394ms 10 14 0ms 7s127ms 2s89ms 2s270ms 2s584ms 7s127ms 11 8 0ms 3s963ms 1s852ms 1s223ms 1s817ms 5s178ms 12 9 0ms 5s919ms 1s823ms 1s212ms 1s300ms 5s919ms 13 11 0ms 10s829ms 2s118ms 1s448ms 2s370ms 10s829ms 14 9 0ms 5s962ms 2s859ms 1s227ms 4s56ms 5s962ms 15 12 0ms 5s289ms 2s902ms 1s270ms 4s451ms 10s436ms 16 9 0ms 10s615ms 3s581ms 1s369ms 4s598ms 10s615ms 17 9 0ms 6s95ms 1s793ms 1s167ms 1s305ms 6s95ms 18 37 0ms 1m12s 11s263ms 39s927ms 1m5s 1m12s 19 55 0ms 23m59s 1m27s 1m31s 6m55s 24m2s 20 5 0ms 4s262ms 2s727ms 0ms 2s974ms 4s262ms 21 3 0ms 1s257ms 1s190ms 0ms 1s88ms 1s257ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 11 0ms 5s68ms 1s921ms 2s223ms 3s628ms 5s68ms Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Aug 25 00 9 0 1m50s 1s141ms 1s214ms 16m28s 01 16 0 1s565ms 1s203ms 1s329ms 6s194ms 02 6 0 1s194ms 0ms 1s186ms 1s352ms 03 13 0 3s78ms 2s226ms 3s859ms 6s4ms 04 12 0 2s9ms 1s311ms 2s903ms 3s827ms 05 44 0 2s506ms 1s456ms 13s743ms 27s705ms 06 9 10 6s153ms 1s294ms 1s399ms 54s113ms 07 12 0 1s909ms 0ms 1s580ms 3s167ms 08 6 0 3s846ms 0ms 0ms 2s924ms 09 7 0 2s360ms 0ms 1s301ms 4s6ms 10 4 10 7s962ms 0ms 1s895ms 54s135ms 11 5 0 2s3ms 0ms 1s209ms 3s965ms 12 8 0 2s130ms 0ms 1s339ms 5s645ms 13 9 0 2s136ms 0ms 1s206ms 7s577ms 14 11 10 5s674ms 1s211ms 1s356ms 54s2ms 15 6 0 3s405ms 0ms 1s211ms 11s442ms 16 9 0 1s834ms 0ms 1s310ms 3s952ms 17 3 0 2s18ms 0ms 0ms 3s807ms 18 15 10 6s410ms 4s315ms 12s164ms 54s99ms 19 10 0 2s682ms 1s198ms 1s538ms 8s73ms 20 9 0 1s865ms 1s195ms 1s607ms 4s662ms 21 6 0 1s706ms 0ms 1s218ms 3s806ms 22 12 0 8s190ms 1s304ms 3s860ms 42s140ms 23 5 0 1s289ms 0ms 1s218ms 1s494ms Aug 26 00 9 0 1m53s 1s187ms 3s814ms 16m29s 01 10 0 2s820ms 1s203ms 3s778ms 11s571ms 02 16 0 2s143ms 1s305ms 2s657ms 5s95ms 03 34 0 3s525ms 3s939ms 4s995ms 17s815ms 04 41 0 3s456ms 4s348ms 7s889ms 15s310ms 05 70 0 2s140ms 4s264ms 9s231ms 25s356ms 06 10 8 6s607ms 1s7ms 2s947ms 33s747ms 07 7 0 1s312ms 0ms 1s200ms 1s479ms 08 27 0 2s720ms 2s774ms 2s843ms 7s852ms 09 10 0 3s592ms 0ms 3s779ms 15s727ms 10 10 10 6s680ms 1s22ms 1s371ms 41s943ms 11 33 0 4s106ms 4s269ms 7s856ms 19s959ms 12 15 0 5s268ms 0ms 3s831ms 21s877ms 13 10 0 10s405ms 0ms 4s974ms 31s226ms 14 16 10 6s82ms 1s210ms 9s598ms 54s301ms 15 12 0 4s870ms 1s175ms 1s571ms 40s291ms 16 9 0 24s470ms 1s11ms 1s240ms 3m23s 17 11 0 2s35ms 0ms 1s211ms 3s925ms 18 13 10 6s12ms 1s214ms 5s673ms 53s986ms 19 6 0 2s217ms 0ms 1s202ms 5s657ms 20 7 0 1s331ms 0ms 1s187ms 1s849ms 21 28 0 3s276ms 3s790ms 7s935ms 12s84ms 22 31 0 2s544ms 3s813ms 4s18ms 11s859ms 23 16 0 2s601ms 1s211ms 3s886ms 8s375ms Aug 27 00 8 0 2m7s 0ms 1s303ms 16m36s 01 10 0 1s506ms 1s145ms 1s206ms 4s984ms 02 11 0 1s829ms 1s179ms 1s304ms 4s754ms 03 24 0 3s874ms 4s41ms 8s813ms 22s797ms 04 35 0 5s236ms 3s817ms 7s606ms 1m42s 05 45 0 2s857ms 3s835ms 12s757ms 26s13ms 06 10 10 6s106ms 1s38ms 2s974ms 41s851ms 07 16 0 4s522ms 1s211ms 4s222ms 42s242ms 08 12 0 2s27ms 1s139ms 1s379ms 7s74ms 09 19 0 1s804ms 1s191ms 1s375ms 9s585ms 10 27 10 7s60ms 9s514ms 25s440ms 54s125ms 11 16 0 6s413ms 1s353ms 11s527ms 19s178ms 12 8 0 7s492ms 0ms 1s633ms 39s180ms 13 16 0 6s45ms 0ms 3s747ms 34s819ms 14 47 10 24s895ms 1m9s 1m23s 4m28s 15 26 0 2s736ms 3s892ms 4s89ms 7s893ms 16 14 0 1s731ms 1s220ms 1s315ms 4s788ms 17 15 0 4s668ms 1s315ms 1s597ms 40s541ms 18 21 10 1m14s 3s800ms 9s603ms 54s376ms 19 28 0 27s659ms 4s208ms 37s346ms 9m1s 20 14 0 2m46s 1s183ms 1s356ms 38m23s 21 27 0 2m9s 3s933ms 58s366ms 6m44s 22 30 0 9s366ms 3s928ms 14s330ms 1m 23 20 0 12s169ms 1s303ms 3s652ms 3m2s Aug 28 00 20 0 54s602ms 2s93ms 4s924ms 28s882ms 01 20 0 3s353ms 3s756ms 4s976ms 10s511ms 02 41 0 2m25s 4s16ms 6s283ms 12s713ms 03 22 0 2m55s 1s990ms 4s154ms 2m24s 04 17 0 2s590ms 1s201ms 3s138ms 6s573ms 05 60 0 3s6ms 5s88ms 9s522ms 34s21ms 06 23 10 4m56s 2s332ms 41s973ms 33m21s 07 26 0 3s673ms 2s459ms 2s828ms 8s951ms 08 19 0 3s692ms 2s412ms 4s83ms 15s783ms 09 41 0 4s257ms 4s578ms 9s242ms 26s355ms 10 48 10 4s694ms 7s621ms 28s817ms 54s30ms 11 57 0 6s995ms 11s44ms 37s717ms 1m25s 12 232 0 13s753ms 29s43ms 30s89ms 3m37s 13 22 0 14s848ms 1s240ms 9s338ms 1m54s 14 8 8 7s123ms 1s167ms 5s623ms 41s780ms 15 18 0 1s937ms 1s250ms 3s802ms 3s985ms 16 10 0 1s989ms 1s184ms 1s211ms 5s783ms 17 9 0 2s195ms 0ms 1s218ms 3s968ms 18 11 10 6s4ms 1s233ms 3s954ms 54s150ms 19 10 0 3s6ms 0ms 1s462ms 10s597ms 20 10 0 3s79ms 1s78ms 1s552ms 8s479ms 21 9 0 1s968ms 1s27ms 1s329ms 5s401ms 22 27 0 1s942ms 1s379ms 4s421ms 12s698ms 23 12 0 12s338ms 1s176ms 2s332ms 2m3s Aug 29 00 12 0 1m24s 1s198ms 2s175ms 16m30s 01 11 0 1s741ms 1s5ms 1s269ms 5s84ms 02 13 0 15s897ms 1s205ms 3s841ms 2m59s 03 13 0 2s122ms 1s226ms 1s401ms 6s975ms 04 18 0 1s991ms 1s260ms 3s743ms 4s906ms 05 99 0 1s628ms 2s425ms 12s785ms 28s244ms 06 7 9 7s19ms 1s124ms 2s259ms 48s676ms 07 12 0 2s377ms 1s141ms 1s423ms 10s772ms 08 17 0 2s336ms 1s577ms 2s398ms 11s326ms 09 12 0 2s192ms 1s205ms 1s704ms 10s289ms 10 17 10 5s829ms 2s674ms 7s570ms 54s239ms 11 13 0 1s274ms 1s208ms 1s378ms 1s475ms 12 19 0 3s53ms 1s333ms 3s856ms 10s278ms 13 8 0 2s165ms 0ms 1s232ms 6s261ms 14 16 10 5s697ms 3s906ms 6s210ms 54s65ms 15 32 0 2s669ms 1s283ms 12s685ms 20s945ms 16 12 0 7s68ms 0ms 4s107ms 39s443ms 17 7 0 1s248ms 0ms 1s218ms 1s386ms 18 16 10 7s923ms 3s953ms 21s884ms 54s158ms 19 32 0 2s737ms 4s131ms 5s139ms 8s252ms 20 17 0 2s188ms 1s253ms 3s942ms 8s218ms 21 10 0 1s716ms 1s223ms 1s513ms 4s623ms 22 46 0 8s926ms 25s845ms 39s64ms 1m56s 23 398 0 9s947ms 2m1s 2m32s 3m3s Aug 30 00 181 0 15s752ms 1m22s 1m50s 17m16s 01 22 0 4s595ms 1s209ms 2s511ms 28s262ms 02 28 0 1s489ms 2s309ms 2s833ms 6s374ms 03 16 0 3s100ms 1s353ms 3s991ms 13s845ms 04 21 0 3s82ms 3s873ms 3s978ms 10s156ms 05 66 0 5s421ms 5s912ms 23s538ms 1m40s 06 12 10 6s423ms 2s920ms 3s951ms 42s77ms 07 19 0 2s874ms 1s214ms 3s985ms 7s13ms 08 21 0 7s998ms 3s520ms 4s335ms 1m43s 09 10 0 6s652ms 0ms 1s307ms 4s554ms 10 17 10 5s552ms 1s363ms 5s141ms 54s345ms 11 10 0 2s401ms 0ms 2s262ms 4s638ms 12 6 0 2s141ms 0ms 1s202ms 4s5ms 13 13 0 2s148ms 1s255ms 1s431ms 8s528ms 14 5 10 7s802ms 0ms 2s716ms 54s161ms 15 15 0 2s401ms 1s163ms 1s441ms 9s497ms 16 13 0 1s475ms 1s133ms 1s322ms 5s544ms 17 14 0 2s563ms 1s201ms 2s475ms 14s630ms 18 19 10 5s183ms 1s618ms 5s113ms 54s106ms 19 9 0 1s290ms 0ms 1s210ms 2s930ms 20 9 0 1s820ms 1s12ms 1s203ms 3s941ms 21 10 0 1s212ms 0ms 1s207ms 2s532ms 22 13 0 1s839ms 1s205ms 1s386ms 6s312ms 23 13 0 1s712ms 1s149ms 2s351ms 4s22ms Aug 31 00 17 0 1m 1s177ms 2s202ms 16m32s 01 7 0 1s755ms 0ms 1s223ms 4s142ms 02 17 0 1s861ms 1s212ms 2s387ms 5s170ms 03 30 0 3s482ms 3s975ms 5s379ms 11s663ms 04 30 0 3s358ms 2s823ms 5s176ms 33s841ms 05 46 0 2s67ms 1s248ms 1s549ms 22s490ms 06 9 0 1s307ms 0ms 1s210ms 3s250ms 07 17 0 2s547ms 1s212ms 3s939ms 9s942ms 08 15 0 2s2ms 1s298ms 1s550ms 4s14ms 09 16 0 1s224ms 1s224ms 1s315ms 2s394ms 10 14 0 2s89ms 1s175ms 2s270ms 7s127ms 11 8 0 1s852ms 0ms 1s223ms 5s178ms 12 8 0 1s815ms 0ms 1s210ms 1s300ms 13 11 0 2s118ms 0ms 1s448ms 10s829ms 14 9 0 2s859ms 0ms 1s227ms 5s950ms 15 12 0 2s902ms 0ms 1s270ms 8s550ms 16 9 0 3s581ms 0ms 1s369ms 6s174ms 17 9 0 1s793ms 0ms 1s167ms 3s999ms 18 11 26 11s263ms 1s282ms 39s927ms 1m6s 19 8 47 1m27s 1m2s 1m30s 23m55s 20 5 0 2s727ms 0ms 0ms 4s119ms 21 3 0 1s190ms 0ms 0ms 1s257ms 22 0 0 0ms 0ms 0ms 0ms 23 11 0 1s921ms 0ms 2s223ms 5s68ms Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Aug 25 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Aug 26 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Aug 27 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 1 0 0 0 11s35ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 4 0 0 0 4m16s 0ms 0ms 3m14s 18 8 0 0 0 4m 0ms 0ms 1m53s 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Aug 28 00 16 9 0 0 1m34s 0ms 0ms 2m15s 01 0 0 0 0 0ms 0ms 0ms 0ms 02 1 0 0 0 2m44s 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Aug 29 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Aug 30 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Aug 31 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare Aug 25 00 0 8 8.00 0.00% 01 0 16 16.00 0.00% 02 0 6 6.00 0.00% 03 0 13 13.00 0.00% 04 0 12 12.00 0.00% 05 0 48 48.00 0.00% 06 0 9 9.00 0.00% 07 0 12 12.00 0.00% 08 0 7 7.00 0.00% 09 0 8 8.00 0.00% 10 0 4 4.00 0.00% 11 0 5 5.00 0.00% 12 0 8 8.00 0.00% 13 0 9 9.00 0.00% 14 0 11 11.00 0.00% 15 0 6 6.00 0.00% 16 0 9 9.00 0.00% 17 0 3 3.00 0.00% 18 0 15 15.00 0.00% 19 0 10 10.00 0.00% 20 0 9 9.00 0.00% 21 0 6 6.00 0.00% 22 0 12 12.00 0.00% 23 0 5 5.00 0.00% Aug 26 00 0 8 8.00 0.00% 01 0 10 10.00 0.00% 02 0 16 16.00 0.00% 03 0 34 34.00 0.00% 04 0 41 41.00 0.00% 05 0 74 74.00 0.00% 06 0 12 12.00 0.00% 07 0 9 9.00 0.00% 08 0 30 30.00 0.00% 09 0 12 12.00 0.00% 10 0 10 10.00 0.00% 11 0 34 34.00 0.00% 12 0 17 17.00 0.00% 13 0 10 10.00 0.00% 14 0 16 16.00 0.00% 15 0 15 15.00 0.00% 16 0 9 9.00 0.00% 17 0 15 15.00 0.00% 18 0 13 13.00 0.00% 19 0 6 6.00 0.00% 20 0 7 7.00 0.00% 21 0 28 28.00 0.00% 22 0 31 31.00 0.00% 23 0 16 16.00 0.00% Aug 27 00 0 7 7.00 0.00% 01 0 10 10.00 0.00% 02 0 11 11.00 0.00% 03 0 24 24.00 0.00% 04 0 35 35.00 0.00% 05 0 49 49.00 0.00% 06 0 12 12.00 0.00% 07 0 18 18.00 0.00% 08 0 15 15.00 0.00% 09 0 20 20.00 0.00% 10 0 26 26.00 0.00% 11 0 17 17.00 0.00% 12 0 10 10.00 0.00% 13 0 17 17.00 0.00% 14 0 47 47.00 0.00% 15 0 25 25.00 0.00% 16 0 15 15.00 0.00% 17 0 19 19.00 0.00% 18 0 29 29.00 0.00% 19 0 28 28.00 0.00% 20 0 14 14.00 0.00% 21 0 60 60.00 0.00% 22 0 30 30.00 0.00% 23 0 34 34.00 0.00% Aug 28 00 0 51 51.00 0.00% 01 0 20 20.00 0.00% 02 0 43 43.00 0.00% 03 0 32 32.00 0.00% 04 0 21 21.00 0.00% 05 1 64 64.00 1.56% 06 0 29 29.00 0.00% 07 0 27 27.00 0.00% 08 0 19 19.00 0.00% 09 0 49 49.00 0.00% 10 0 24 24.00 0.00% 11 0 57 57.00 0.00% 12 0 231 231.00 0.00% 13 0 22 22.00 0.00% 14 0 8 8.00 0.00% 15 0 18 18.00 0.00% 16 0 10 10.00 0.00% 17 0 9 9.00 0.00% 18 0 11 11.00 0.00% 19 0 10 10.00 0.00% 20 0 10 10.00 0.00% 21 0 9 9.00 0.00% 22 0 27 27.00 0.00% 23 0 12 12.00 0.00% Aug 29 00 0 11 11.00 0.00% 01 0 11 11.00 0.00% 02 0 13 13.00 0.00% 03 0 13 13.00 0.00% 04 0 18 18.00 0.00% 05 0 111 111.00 0.00% 06 0 9 9.00 0.00% 07 0 13 13.00 0.00% 08 0 17 17.00 0.00% 09 0 12 12.00 0.00% 10 0 18 18.00 0.00% 11 0 13 13.00 0.00% 12 0 19 19.00 0.00% 13 0 9 9.00 0.00% 14 0 16 16.00 0.00% 15 0 34 34.00 0.00% 16 0 14 14.00 0.00% 17 0 7 7.00 0.00% 18 0 16 16.00 0.00% 19 0 32 32.00 0.00% 20 0 18 18.00 0.00% 21 0 10 10.00 0.00% 22 0 46 46.00 0.00% 23 0 398 398.00 0.00% Aug 30 00 0 181 181.00 0.00% 01 0 22 22.00 0.00% 02 0 28 28.00 0.00% 03 0 16 16.00 0.00% 04 0 22 22.00 0.00% 05 0 70 70.00 0.00% 06 0 14 14.00 0.00% 07 0 25 25.00 0.00% 08 0 22 22.00 0.00% 09 0 10 10.00 0.00% 10 0 17 17.00 0.00% 11 0 12 12.00 0.00% 12 0 6 6.00 0.00% 13 0 13 13.00 0.00% 14 0 5 5.00 0.00% 15 0 15 15.00 0.00% 16 0 13 13.00 0.00% 17 0 14 14.00 0.00% 18 0 19 19.00 0.00% 19 0 9 9.00 0.00% 20 0 9 9.00 0.00% 21 0 10 10.00 0.00% 22 0 13 13.00 0.00% 23 0 13 13.00 0.00% Aug 31 00 0 16 16.00 0.00% 01 0 7 7.00 0.00% 02 0 17 17.00 0.00% 03 0 30 30.00 0.00% 04 0 30 30.00 0.00% 05 0 50 50.00 0.00% 06 0 9 9.00 0.00% 07 0 17 17.00 0.00% 08 0 15 15.00 0.00% 09 0 16 16.00 0.00% 10 0 14 14.00 0.00% 11 0 8 8.00 0.00% 12 0 9 9.00 0.00% 13 0 11 11.00 0.00% 14 0 9 9.00 0.00% 15 0 12 12.00 0.00% 16 0 9 9.00 0.00% 17 0 9 9.00 0.00% 18 0 11 11.00 0.00% 19 0 8 8.00 0.00% 20 0 5 5.00 0.00% 21 0 3 3.00 0.00% 22 0 0 0.00 0.00% 23 0 11 11.00 0.00% Day Hour Count Average / Second Aug 25 00 79 0.02/s 01 79 0.02/s 02 82 0.02/s 03 78 0.02/s 04 79 0.02/s 05 92 0.03/s 06 84 0.02/s 07 96 0.03/s 08 96 0.03/s 09 75 0.02/s 10 79 0.02/s 11 80 0.02/s 12 82 0.02/s 13 90 0.03/s 14 79 0.02/s 15 77 0.02/s 16 76 0.02/s 17 75 0.02/s 18 81 0.02/s 19 75 0.02/s 20 74 0.02/s 21 73 0.02/s 22 78 0.02/s 23 79 0.02/s Aug 26 00 80 0.02/s 01 79 0.02/s 02 87 0.02/s 03 79 0.02/s 04 81 0.02/s 05 142 0.04/s 06 93 0.03/s 07 74 0.02/s 08 76 0.02/s 09 86 0.02/s 10 105 0.03/s 11 126 0.04/s 12 152 0.04/s 13 95 0.03/s 14 88 0.02/s 15 76 0.02/s 16 78 0.02/s 17 74 0.02/s 18 78 0.02/s 19 76 0.02/s 20 77 0.02/s 21 73 0.02/s 22 80 0.02/s 23 85 0.02/s Aug 27 00 79 0.02/s 01 83 0.02/s 02 80 0.02/s 03 84 0.02/s 04 87 0.02/s 05 116 0.03/s 06 74 0.02/s 07 81 0.02/s 08 77 0.02/s 09 77 0.02/s 10 100 0.03/s 11 84 0.02/s 12 81 0.02/s 13 128 0.04/s 14 130 0.04/s 15 80 0.02/s 16 70 0.02/s 17 74 0.02/s 18 96 0.03/s 19 104 0.03/s 20 75 0.02/s 21 93 0.03/s 22 115 0.03/s 23 87 0.02/s Aug 28 00 91 0.03/s 01 82 0.02/s 02 108 0.03/s 03 82 0.02/s 04 84 0.02/s 05 102 0.03/s 06 83 0.02/s 07 78 0.02/s 08 80 0.02/s 09 105 0.03/s 10 119 0.03/s 11 98 0.03/s 12 83 0.02/s 13 97 0.03/s 14 79 0.02/s 15 81 0.02/s 16 78 0.02/s 17 86 0.02/s 18 81 0.02/s 19 76 0.02/s 20 80 0.02/s 21 75 0.02/s 22 90 0.03/s 23 83 0.02/s Aug 29 00 77 0.02/s 01 76 0.02/s 02 74 0.02/s 03 79 0.02/s 04 87 0.02/s 05 96 0.03/s 06 77 0.02/s 07 81 0.02/s 08 87 0.02/s 09 78 0.02/s 10 81 0.02/s 11 72 0.02/s 12 99 0.03/s 13 80 0.02/s 14 83 0.02/s 15 98 0.03/s 16 78 0.02/s 17 76 0.02/s 18 82 0.02/s 19 80 0.02/s 20 77 0.02/s 21 74 0.02/s 22 90 0.03/s 23 211 0.06/s Aug 30 00 128 0.04/s 01 81 0.02/s 02 77 0.02/s 03 73 0.02/s 04 84 0.02/s 05 183 0.05/s 06 100 0.03/s 07 81 0.02/s 08 112 0.03/s 09 88 0.02/s 10 81 0.02/s 11 74 0.02/s 12 73 0.02/s 13 80 0.02/s 14 80 0.02/s 15 90 0.03/s 16 91 0.03/s 17 75 0.02/s 18 78 0.02/s 19 79 0.02/s 20 81 0.02/s 21 75 0.02/s 22 82 0.02/s 23 82 0.02/s Aug 31 00 98 0.03/s 01 114 0.03/s 02 82 0.02/s 03 86 0.02/s 04 86 0.02/s 05 100 0.03/s 06 80 0.02/s 07 99 0.03/s 08 132 0.04/s 09 189 0.05/s 10 172 0.05/s 11 194 0.05/s 12 173 0.05/s 13 315 0.09/s 14 519 0.14/s 15 613 0.17/s 16 572 0.16/s 17 582 0.16/s 18 553 0.15/s 19 519 0.14/s 20 481 0.13/s 21 121 0.03/s 22 141 0.04/s 23 144 0.04/s Day Hour Count Average Duration Average idle time Aug 25 00 79 30m5s 29m52s 01 79 30m32s 30m31s 02 82 29m39s 29m39s 03 78 31m20s 31m20s 04 79 30m26s 30m25s 05 92 26m 25m58s 06 84 29m15s 29m14s 07 96 24m38s 24m38s 08 96 25m7s 25m7s 09 75 32m7s 32m7s 10 79 31m37s 31m36s 11 80 30m13s 30m13s 12 82 30m37s 30m37s 13 90 25m56s 25m56s 14 79 30m33s 30m31s 15 77 31m50s 31m50s 16 76 31m54s 31m54s 17 75 31m30s 31m30s 18 81 30m8s 30m6s 19 75 29m22s 29m21s 20 74 30m52s 30m52s 21 73 31m2s 31m2s 22 78 29m59s 29m58s 23 79 31m47s 31m47s Aug 26 00 80 30m53s 30m40s 01 79 30m52s 30m51s 02 87 28m3s 28m3s 03 79 29m56s 29m55s 04 81 29m4s 29m2s 05 142 17m29s 17m28s 06 93 25m9s 25m7s 07 74 32m13s 32m12s 08 76 31m54s 31m53s 09 86 28m58s 28m57s 10 105 23m 22m59s 11 126 19m34s 19m33s 12 152 16m14s 16m13s 13 95 25m14s 25m13s 14 85 28m4s 28m2s 15 76 31m36s 31m36s 16 78 31m34s 31m31s 17 74 31m27s 31m26s 18 79 32m24s 32m22s 19 76 31m55s 31m55s 20 79 39m22s 39m22s 21 73 29m48s 29m47s 22 80 31m5s 31m4s 23 85 29m15s 29m14s Aug 27 00 79 30m19s 30m6s 01 83 29m51s 29m51s 02 80 30m21s 30m21s 03 84 27m56s 27m55s 04 87 28m24s 28m22s 05 116 20m8s 20m7s 06 74 30m43s 30m41s 07 81 31m4s 31m3s 08 77 31m22s 31m21s 09 77 31m36s 31m36s 10 99 24m10s 24m7s 11 84 28m39s 28m37s 12 81 30m14s 30m14s 13 124 19m30s 19m29s 14 128 19m24s 19m13s 15 80 29m55s 29m53s 16 72 34m32s 34m31s 17 73 33m1s 32m46s 18 97 28m40s 27m57s 19 104 23m38s 23m31s 20 75 30m33s 30m2s 21 93 27m3s 26m13s 22 115 21m43s 21m41s 23 87 27m38s 27m23s Aug 28 00 91 27m34s 26m55s 01 82 29m49s 29m48s 02 108 22m40s 21m44s 03 82 28m45s 27m56s 04 84 29m39s 29m5s 05 102 15h57m46s 15h57m44s 06 84 32m34s 30m37s 07 78 31m41s 31m40s 08 80 30m9s 30m8s 09 105 22m22s 22m21s 10 112 22m53s 22m51s 11 97 24m28s 24m24s 12 83 28m59s 28m21s 13 98 2d3h25m56s 2d3h25m53s 14 76 29m35s 29m34s 15 81 30m14s 30m13s 16 78 30m24s 30m24s 17 86 28m12s 28m12s 18 81 30m24s 30m22s 19 77 38m3s 38m3s 20 90 1h57m12s 1h57m11s 21 78 1h28m43s 1h28m43s 22 90 27m35s 27m35s 23 83 28m35s 28m33s Aug 29 00 77 31m13s 31m 01 75 32m40s 32m40s 02 75 31m5s 31m3s 03 79 29m52s 29m51s 04 87 27m26s 27m25s 05 96 25m28s 25m26s 06 77 31m20s 31m19s 07 81 30m30s 30m30s 08 81 29m13s 29m13s 09 78 31m24s 31m23s 10 80 30m59s 30m57s 11 72 32m30s 32m29s 12 99 23m53s 23m53s 13 80 29m36s 29m35s 14 83 29m3s 29m1s 15 98 24m4s 24m3s 16 78 31m18s 31m17s 17 76 30m32s 30m32s 18 88 1h9m51s 1h9m49s 19 81 36m35s 36m34s 20 77 30m39s 30m39s 21 74 32m34s 32m34s 22 90 27m3s 26m58s 23 207 36m34s 36m15s Aug 30 00 132 17m49s 17m28s 01 81 30m15s 30m14s 02 77 30m28s 30m27s 03 73 31m43s 31m42s 04 84 28m48s 28m47s 05 183 13m3s 13m1s 06 100 23m16s 23m14s 07 81 30m27s 30m27s 08 112 22m43s 22m42s 09 87 26m53s 26m52s 10 80 30m12s 30m11s 11 74 31m35s 31m35s 12 73 33m1s 33m1s 13 80 30m45s 30m45s 14 80 29m43s 29m42s 15 89 26m59s 26m58s 16 91 26m44s 26m44s 17 75 31m19s 31m19s 18 78 30m56s 30m54s 19 82 46m50s 46m50s 20 81 29m8s 29m8s 21 75 30m11s 30m11s 22 82 29m48s 29m47s 23 82 29m20s 29m19s Aug 31 00 98 25m23s 25m12s 01 114 21m22s 21m22s 02 82 29m2s 29m2s 03 86 27m59s 27m58s 04 86 28m47s 28m45s 05 100 23m43s 23m42s 06 80 29m10s 29m10s 07 99 25m9s 25m9s 08 132 18m58s 18m58s 09 189 12m28s 12m28s 10 172 13m45s 13m45s 11 194 11m58s 11m58s 12 173 13m58s 13m58s 13 315 7m50s 7m50s 14 519 4m34s 4m33s 15 612 3m59s 3m59s 16 572 4m13s 4m13s 17 581 4m19s 4m19s 18 554 4m25s 4m24s 19 520 4m42s 4m33s 20 481 4m55s 4m55s 21 121 19m2s 19m2s 22 141 17m13s 17m13s 23 144 17m17s 17m17s -
Connections
Established Connections
Key values
- 58 connections Connection Peak
- 2024-08-31 20:03:34 Date
Connections per database
Key values
- ctdprd51 Main Database
- 18,720 connections Total
Connections per user
Key values
- pubeu Main User
- 18,720 connections Total
-
Sessions
Simultaneous sessions
Key values
- 153 sessions Session Peak
- 2024-08-28 00:23:47 Date
Histogram of session times
Key values
- 12,175 1800000-3600000ms duration
Sessions per database
Key values
- ctdprd51 Main Database
- 18,720 sessions Total
Sessions per user
Key values
- pubeu Main User
- 18,720 sessions Total
User Count Total Duration Average Duration edit 17 7d4h14m31s 10h7m54s editeu 2,610 264d8h21m12s 2h25m50s load 171 3d15h3m12s 30m32s postgres 51 2h12m59s 2m36s pub1 7 18h54m8s 2h42m1s pub2 33 3d6h53m18s 2h23m26s pubc 9 1h57m18s 13m2s pubeu 10,475 112d4h4m32s 15m25s qaeu 5,339 112d3h19m38s 30m14s zbx_monitor 8 69d17h6m35s 8d17h8m19s Sessions per host
Key values
- 10.12.5.37 Main Host
- 18,720 sessions Total
Host Count Total Duration Average Duration 10.12.5.122 19 208d8h16m38s 10d23h10m20s 10.12.5.36 38 2h1m5s 3m11s 10.12.5.37 7,859 56d5h42m45s 10m18s 10.12.5.38 2,626 56d22m4s 30m43s 10.12.5.39 2,589 56d50s 31m8s 10.12.5.40 171 14h34m30s 5m6s 10.12.5.45 2,682 55d23h54m17s 30m3s 10.12.5.46 2,639 56d1h27m34s 30m35s 192.168.201.10 22 10d1h4m5s 10h57m27s 192.168.201.14 12 3d20h56m14s 7h44m41s 192.168.201.18 4 8h27m45s 2h6m56s ::1 59 69d19h19m34s 1d4h23m43s -
Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 4,973,427 buffers Checkpoint Peak
- 2024-08-28 00:07:40 Date
- 1619.995 seconds Highest write time
- 1.037 seconds Sync time
Checkpoints Wal files
Key values
- 930 files Wal files usage Peak
- 2024-08-28 03:42:54 Date
Checkpoints distance
Key values
- 17,873.47 Mo Distance Peak
- 2024-08-28 04:06:10 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time Aug 25 00 554 55.698s 0.003s 55.768s 01 4,529 453.727s 0.003s 453.831s 02 121 12.3s 0.002s 12.331s 03 134 13.606s 0.002s 13.637s 04 70 7.201s 0.002s 7.232s 05 208 21.042s 0.002s 21.072s 06 255 25.745s 0.002s 25.774s 07 328 32.952s 0.002s 32.984s 08 5,744 575.394s 0.003s 575.494s 09 4,865 487.515s 0.003s 487.615s 10 145 14.71s 0.002s 14.74s 11 366 36.855s 0.027s 36.948s 12 4,530 453.691s 0.003s 453.721s 13 5,552 556.408s 0.003s 556.52s 14 1,224 122.802s 0.003s 122.834s 15 742 74.522s 0.003s 74.554s 16 1,900 190.547s 0.003s 190.626s 17 69 7.09s 0.002s 7.118s 18 57 5.885s 0.002s 5.915s 19 8,130 814.091s 0.003s 814.206s 20 68 6.987s 0.002s 7.019s 21 60 6.194s 0.002s 6.227s 22 143 14.509s 0.002s 14.541s 23 290 29.245s 0.002s 29.291s Aug 26 00 666 66.931s 0.003s 66.964s 01 13,749 1,376.618s 0.003s 1,376.792s 02 122 12.414s 0.002s 12.444s 03 2,378 238.287s 0.002s 238.35s 04 28,200 1,789.883s 0.004s 1,790.212s 05 189 19.078s 0.002s 19.109s 06 391 39.379s 0.003s 39.41s 07 335 33.752s 0.002s 33.783s 08 557 56.003s 0.002s 56.047s 09 6,088 610.054s 0.004s 610.155s 10 58,629 1,916.052s 0.004s 1,916.58s 11 223 22.548s 0.003s 22.579s 12 368 37.082s 0.003s 37.112s 13 112 11.453s 0.002s 11.482s 14 391 39.381s 0.003s 39.411s 15 365 36.771s 0.002s 36.802s 16 237 23.828s 0.002s 23.859s 17 360 36.257s 0.002s 36.288s 18 2,309 231.451s 0.003s 231.53s 19 75 7.689s 0.002s 7.72s 20 157 15.915s 0.002s 15.946s 21 87 8.901s 0.002s 8.932s 22 52 5.301s 0.001s 5.316s 23 58,828 2,249.477s 0.006s 2,250.011s Aug 27 00 559 56.206s 0.003s 56.276s 01 132,125 1,621.546s 0.003s 1,622.495s 02 390 39.255s 0.002s 39.303s 03 56,294 2,236.131s 0.004s 2,236.627s 04 138 14.019s 0.002s 14.051s 05 4,944 495.474s 0.004s 495.53s 06 424 42.676s 0.003s 42.706s 07 382 38.463s 0.002s 38.494s 08 157 15.92s 0.002s 15.951s 09 200 20.217s 0.002s 20.248s 10 2,470 247.635s 0.134s 247.935s 11 659 66.153s 0.018s 66.224s 12 227 22.934s 0.002s 22.964s 13 126 12.718s 0.001s 12.733s 14 258,920 2,160.498s 0.301s 2,186.023s 15 43,928 1,377.119s 0.009s 1,387.989s 16 153 15.518s 0.002s 15.548s 17 1,774,575 979.982s 0.443s 1,000.96s 18 1,532,204 3,132.065s 0.083s 3,145.215s 19 69,749 3,243.297s 0.018s 3,243.703s 20 83 8.493s 0.002s 8.524s 21 4,014,126 1,767.245s 0.022s 1,809.21s 22 181,467 2,961.932s 0.157s 2,963.947s 23 3,961,568 2,803.585s 0.238s 2,829.029s Aug 28 00 6,714,235 1,988.413s 1.161s 2,016.908s 01 2,040,685 3,243.652s 0.007s 3,252.043s 02 57,792 1,619.497s 0.018s 1,619.792s 03 986,197 3,233.136s 2.557s 3,333.918s 04 140,490 379.99s 1.025s 442.129s 05 593,857 3,239.389s 0.012s 3,250.464s 06 682,986 3,729.29s 0.138s 3,736.487s 07 583,048 1,736.359s 0.006s 1,740.24s 08 343 34.455s 0.002s 34.472s 09 103,164 3,396.818s 0.006s 3,397.04s 10 25,351 1,643.141s 0.003s 1,643.208s 11 20,363 1,628.443s 0.003s 1,628.514s 12 202 20.447s 0.002s 20.477s 13 4,647 465.551s 0.002s 465.638s 14 2,147 215.32s 0.003s 215.351s 15 161 16.325s 0.002s 16.403s 16 782 78.548s 0.004s 78.579s 17 4,521 452.983s 0.003s 453.07s 18 253 25.541s 0.002s 25.57s 19 114 11.602s 0.002s 11.631s 20 238 24.02s 0.002s 24.05s 21 107 10.911s 0.002s 10.941s 22 326 32.842s 0.002s 32.873s 23 119 12.109s 0.002s 12.139s Aug 29 00 699 70.262s 0.004s 70.295s 01 1,882 188.724s 0.003s 188.807s 02 165 16.717s 0.002s 16.748s 03 50,223 1,625.222s 0.003s 1,625.366s 04 4,183 419.246s 0.003s 419.325s 05 11,203 1,122.139s 0.004s 1,122.282s 06 367 36.964s 0.003s 36.996s 07 220 22.229s 0.002s 22.26s 08 98 9.91s 0.001s 9.925s 09 56,251 1,632.957s 0.004s 1,633.158s 10 7,752 776.348s 0.004s 776.491s 11 208 21.046s 0.002s 21.076s 12 202 20.426s 0.002s 20.457s 13 233 23.535s 0.002s 23.567s 14 54 5.501s 0.001s 5.517s 15 24,471 1,778.082s 0.005s 1,778.22s 16 1,225 122.926s 0.004s 122.958s 17 890 89.355s 0.003s 89.388s 18 927 93.056s 0.002s 93.087s 19 1,002 100.58s 0.002s 100.61s 20 387 38.865s 0.001s 38.88s 21 65,361 2,383.474s 0.004s 2,383.655s 22 850 85.326s 0.003s 85.358s 23 1,952 196.108s 0.003s 196.187s Aug 30 00 1,621 162.841s 0.004s 162.875s 01 480 48.293s 0.002s 48.323s 02 848 85.148s 0.003s 85.18s 03 52,720 1,631.562s 0.003s 1,631.701s 04 1,612 161.704s 0.004s 161.784s 05 1,004 100.694s 0.002s 100.726s 06 837 84.043s 0.003s 84.074s 07 1,321 132.543s 0.002s 132.574s 08 1,436 143.955s 0.002s 144.018s 09 50,235 1,658.537s 0.004s 1,658.692s 10 546 54.885s 0.002s 54.917s 11 1,601 160.592s 0.003s 160.671s 12 4,576 458.498s 0.004s 458.581s 13 711 71.423s 0.002s 71.5s 14 588 59.093s 0.003s 59.122s 15 749 75.23s 0.004s 75.34s 16 375 37.755s 0.002s 37.784s 17 419 42.169s 0.002s 42.2s 18 1,850 185.532s 0.003s 185.612s 19 319 32.136s 0.002s 32.165s 20 364 36.639s 0.002s 36.669s 21 328 33.047s 0.002s 33.077s 22 414 41.557s 0.002s 41.587s 23 359 36.144s 0.002s 36.174s Aug 31 00 453 45.484s 0.001s 45.499s 01 55,479 1,666.511s 0.005s 1,666.711s 02 493 49.567s 0.003s 49.598s 03 428 43.061s 0.002s 43.091s 04 4,343 435.086s 0.003s 435.129s 05 464 46.677s 0.003s 46.753s 06 3,810 381.679s 0.003s 381.722s 07 351 35.353s 0.002s 35.384s 08 2,322 232.869s 0.003s 232.95s 09 279 28.301s 0.002s 28.331s 10 239 24.195s 0.002s 24.227s 11 283 28.607s 0.002s 28.638s 12 367 36.91s 0.002s 36.942s 13 349 35.211s 0.002s 35.24s 14 1,035 103.967s 0.003s 104.009s 15 422 42.58s 0.002s 42.613s 16 533 53.684s 0.002s 53.713s 17 423 42.586s 0.003s 42.618s 18 350 35.357s 0.002s 35.391s 19 122,593 1,633.879s 0.003s 1,633.912s 20 3,766 377.442s 0.003s 377.472s 21 214 21.662s 0.002s 21.694s 22 237 23.987s 0.002s 24.018s 23 4,451 446.002s 0.002s 446.085s Day Hour Added Removed Recycled Synced files Longest sync Average sync Aug 25 00 0 0 0 65 0.001s 0.002s 01 0 0 3 34 0.001s 0.002s 02 0 0 0 28 0.001s 0.002s 03 0 0 0 30 0.001s 0.002s 04 0 0 0 22 0.001s 0.002s 05 0 0 0 48 0.001s 0.002s 06 0 0 0 80 0.001s 0.002s 07 0 0 0 117 0.001s 0.002s 08 0 0 3 135 0.001s 0.002s 09 0 0 3 141 0.001s 0.002s 10 0 0 0 63 0.001s 0.002s 11 0 0 3 27 0.014s 0.003s 12 0 0 0 27 0.001s 0.002s 13 0 0 4 39 0.001s 0.002s 14 0 0 0 29 0.001s 0.002s 15 0 0 0 36 0.001s 0.002s 16 0 0 1 90 0.001s 0.002s 17 0 0 0 22 0.001s 0.002s 18 0 0 0 19 0.001s 0.002s 19 0 0 4 33 0.001s 0.002s 20 0 0 0 18 0.001s 0.002s 21 0 0 0 20 0.001s 0.002s 22 0 0 0 31 0.001s 0.002s 23 0 0 1 31 0.001s 0.002s Aug 26 00 0 0 0 75 0.001s 0.002s 01 0 0 9 42 0.001s 0.002s 02 0 0 0 28 0.001s 0.002s 03 0 0 1 30 0.001s 0.001s 04 0 0 18 90 0.001s 0.003s 05 0 0 0 37 0.001s 0.002s 06 0 0 0 127 0.001s 0.002s 07 0 0 0 120 0.001s 0.002s 08 0 0 1 100 0.001s 0.002s 09 0 0 3 89 0.001s 0.002s 10 0 0 39 150 0.001s 0.002s 11 0 0 0 71 0.001s 0.002s 12 0 0 0 173 0.001s 0.002s 13 0 0 0 27 0.001s 0.002s 14 0 0 0 80 0.001s 0.002s 15 0 0 0 122 0.001s 0.002s 16 0 0 0 107 0.001s 0.002s 17 0 0 0 119 0.001s 0.002s 18 0 0 1 77 0.001s 0.002s 19 0 0 0 20 0.001s 0.002s 20 0 0 0 29 0.001s 0.002s 21 0 0 0 20 0.001s 0.002s 22 0 0 0 12 0.001s 0.001s 23 0 0 38 92 0.001s 0.003s Aug 27 00 0 0 0 76 0.001s 0.002s 01 0 0 74 48 0.001s 0.002s 02 0 0 1 47 0.001s 0.002s 03 0 0 36 64 0.001s 0.002s 04 0 0 0 30 0.001s 0.002s 05 0 0 2 53 0.001s 0.002s 06 0 0 0 120 0.001s 0.002s 07 0 0 0 122 0.001s 0.002s 08 0 0 0 57 0.001s 0.002s 09 0 0 0 66 0.001s 0.002s 10 0 0 1 648 0.001s 0.002s 11 0 0 1 256 0.001s 0.002s 12 0 0 0 103 0.001s 0.002s 13 0 0 0 54 0.001s 0.001s 14 0 107 1,905 474 0.115s 0.008s 15 0 0 885 155 0.001s 0.002s 16 0 0 0 62 0.001s 0.002s 17 0 31 1,615 345 0.064s 0.006s 18 0 0 1,076 203 0.016s 0.003s 19 0 0 27 224 0.001s 0.003s 20 0 0 0 20 0.001s 0.002s 21 0 85 3,086 244 0.002s 0.006s 22 0 0 131 93 0.151s 0.005s 23 0 9 1,819 193 0.222s 0.018s Aug 28 00 0 112 2,149 613 0.757s 0.014s 01 0 0 680 202 0.001s 0.003s 02 0 71 0 58 0.010s 0.001s 03 0 413 7,009 700 0.862s 0.144s 04 0 69 4,233 363 0.768s 0.068s 05 0 0 907 219 0.001s 0.002s 06 0 86 538 236 0.081s 0.004s 07 0 0 319 264 0.001s 0.003s 08 0 0 0 68 0.001s 0.001s 09 0 68 0 182 0.001s 0.003s 10 0 9 0 94 0.001s 0.002s 11 0 10 0 67 0.001s 0.002s 12 0 0 0 30 0.001s 0.002s 13 0 3 0 137 0.001s 0.002s 14 0 0 0 129 0.001s 0.002s 15 0 1 0 57 0.001s 0.002s 16 0 0 0 134 0.001s 0.002s 17 0 3 0 127 0.001s 0.002s 18 0 0 0 69 0.001s 0.002s 19 0 0 0 22 0.001s 0.002s 20 0 0 0 34 0.001s 0.002s 21 0 0 0 21 0.001s 0.002s 22 0 0 0 31 0.001s 0.002s 23 0 0 0 21 0.001s 0.002s Aug 29 00 0 0 0 80 0.001s 0.002s 01 0 1 0 40 0.001s 0.002s 02 0 0 0 35 0.001s 0.002s 03 0 34 0 43 0.001s 0.002s 04 0 1 0 50 0.001s 0.002s 05 0 7 0 96 0.001s 0.002s 06 0 0 0 110 0.001s 0.002s 07 0 0 0 120 0.001s 0.002s 08 0 0 0 18 0.001s 0.001s 09 0 34 0 56 0.001s 0.003s 10 0 4 0 78 0.001s 0.002s 11 0 0 0 68 0.001s 0.002s 12 0 0 0 31 0.001s 0.002s 13 0 0 0 128 0.001s 0.002s 14 0 0 0 12 0.001s 0.001s 15 0 15 0 201 0.001s 0.003s 16 0 0 0 135 0.001s 0.002s 17 0 0 0 62 0.001s 0.002s 18 0 0 0 23 0.001s 0.002s 19 0 0 0 28 0.001s 0.002s 20 0 0 0 10 0.001s 0.001s 21 0 44 0 67 0.001s 0.003s 22 0 0 0 26 0.001s 0.002s 23 0 1 0 52 0.001s 0.002s Aug 30 00 0 0 0 84 0.001s 0.002s 01 0 0 0 35 0.001s 0.002s 02 0 0 0 48 0.001s 0.002s 03 0 34 0 42 0.001s 0.002s 04 0 1 0 50 0.001s 0.002s 05 0 0 0 40 0.001s 0.002s 06 0 0 0 84 0.001s 0.002s 07 0 0 0 133 0.001s 0.002s 08 0 1 0 63 0.001s 0.001s 09 0 33 0 107 0.001s 0.003s 10 0 0 0 34 0.001s 0.002s 11 0 1 0 122 0.001s 0.002s 12 0 2 0 143 0.001s 0.002s 13 0 1 0 133 0.001s 0.002s 14 0 0 0 117 0.001s 0.002s 15 0 1 0 149 0.001s 0.002s 16 0 0 0 68 0.001s 0.002s 17 0 0 0 28 0.001s 0.002s 18 0 1 0 41 0.001s 0.002s 19 0 0 0 19 0.001s 0.002s 20 0 0 0 22 0.001s 0.002s 21 0 0 0 21 0.001s 0.002s 22 0 0 0 29 0.001s 0.002s 23 0 0 0 22 0.001s 0.002s Aug 31 00 0 0 0 23 0.001s 0.001s 01 0 36 0 95 0.001s 0.003s 02 0 0 0 37 0.001s 0.002s 03 0 0 0 36 0.001s 0.002s 04 0 2 0 41 0.001s 0.002s 05 0 1 0 29 0.001s 0.002s 06 0 2 0 32 0.001s 0.002s 07 0 0 0 28 0.001s 0.002s 08 0 1 0 46 0.001s 0.002s 09 0 0 0 21 0.001s 0.002s 10 0 0 0 29 0.001s 0.002s 11 0 0 0 23 0.001s 0.002s 12 0 0 0 40 0.001s 0.002s 13 0 0 0 31 0.001s 0.002s 14 0 1 0 38 0.001s 0.002s 15 0 0 0 38 0.001s 0.002s 16 0 0 0 31 0.001s 0.002s 17 0 0 0 27 0.001s 0.002s 18 0 0 0 31 0.001s 0.002s 19 0 0 0 32 0.001s 0.002s 20 0 0 0 31 0.001s 0.002s 21 0 0 0 20 0.001s 0.002s 22 0 0 0 20 0.001s 0.002s 23 0 3 0 38 0.001s 0.002s Day Hour Count Avg time (sec) Aug 25 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 26 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 27 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 28 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 29 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 30 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 31 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Day Hour Mean distance Mean estimate Aug 25 00 1,566.00 kB 79,057.00 kB 01 22,911.00 kB 66,403.50 kB 02 205.50 kB 55,884.00 kB 03 200.00 kB 45,304.00 kB 04 94.00 kB 36,710.00 kB 05 571.00 kB 29,815.00 kB 06 544.50 kB 24,264.00 kB 07 1,173.00 kB 19,852.50 kB 08 21,983.50 kB 40,719.00 kB 09 23,991.50 kB 44,808.00 kB 10 377.50 kB 36,402.00 kB 11 1,032.50 kB 29,595.50 kB 12 22,976.00 kB 43,600.50 kB 13 29,291.00 kB 47,847.50 kB 14 3,643.00 kB 50,393.50 kB 15 2,187.00 kB 41,368.00 kB 16 5,742.50 kB 34,476.50 kB 17 88.00 kB 28,252.50 kB 18 65.50 kB 22,898.00 kB 19 36,207.00 kB 45,936.50 kB 20 103.00 kB 61,864.50 kB 21 109.50 kB 50,131.50 kB 22 309.50 kB 40,664.00 kB 23 769.50 kB 33,026.00 kB Aug 26 00 1,699.00 kB 27,041.50 kB 01 72,759.00 kB 138,009.00 kB 02 173.00 kB 111,818.00 kB 03 17,818.00 kB 97,136.00 kB 04 99,532.33 kB 259,541.33 kB 05 489.50 kB 199,736.50 kB 06 1,207.50 kB 161,992.00 kB 07 1,190.50 kB 131,433.50 kB 08 1,761.00 kB 106,763.50 kB 09 30,882.00 kB 89,818.50 kB 10 314,273.50 kB 579,190.00 kB 11 477.50 kB 470,098.00 kB 12 967.50 kB 380,955.50 kB 13 200.50 kB 308,647.50 kB 14 1,191.50 kB 250,134.50 kB 15 907.00 kB 202,845.50 kB 16 542.00 kB 164,419.50 kB 17 1,174.00 kB 133,366.50 kB 18 7,699.00 kB 109,548.00 kB 19 92.50 kB 88,750.50 kB 20 331.50 kB 71,951.00 kB 21 115.00 kB 58,301.00 kB 22 131.00 kB 49,728.00 kB 23 205,319.33 kB 519,141.33 kB Aug 27 00 1,568.00 kB 399,632.00 kB 01 608,659.50 kB 1,156,409.00 kB 02 960.00 kB 936,805.50 kB 03 297,586.00 kB 813,406.50 kB 04 259.50 kB 660,906.50 kB 05 17,735.50 kB 538,104.00 kB 06 1,271.50 kB 436,653.00 kB 07 1,108.00 kB 353,919.50 kB 08 378.50 kB 286,772.00 kB 09 457.00 kB 232,380.00 kB 10 7,239.00 kB 188,979.50 kB 11 1,772.00 kB 154,009.50 kB 12 502.00 kB 124,863.00 kB 13 783.00 kB 106,566.00 kB 14 6,489,362.40 kB 6,494,084.60 kB 15 7,512,061.50 kB 8,692,646.00 kB 16 257.00 kB 7,320,167.00 kB 17 6,609,602.50 kB 8,170,704.50 kB 18 8,813,607.50 kB 8,818,203.50 kB 19 321,594.00 kB 7,255,897.67 kB 20 125.50 kB 5,562,868.00 kB 21 8,573,943.17 kB 8,577,347.83 kB 22 1,070,971.50 kB 7,727,099.00 kB 23 7,935,451.25 kB 8,795,703.75 kB Aug 28 00 8,811,094.25 kB 8,916,770.75 kB 01 3,890,016.67 kB 8,214,178.67 kB 02 647,397.00 kB 6,778,625.00 kB 03 8,163,155.40 kB 8,502,693.13 kB 04 8,887,222.62 kB 9,025,873.75 kB 05 6,795,568.50 kB 8,796,292.00 kB 06 3,342,531.00 kB 7,884,542.67 kB 07 1,917,566.67 kB 7,692,112.67 kB 08 1,465.00 kB 6,208,183.00 kB 09 370,115.00 kB 5,132,506.33 kB 10 75,575.50 kB 3,964,976.50 kB 11 79,416.00 kB 3,226,799.00 kB 12 391.00 kB 2,613,774.00 kB 13 22,033.50 kB 2,121,321.50 kB 14 6,469.00 kB 1,719,016.00 kB 15 280.00 kB 1,392,970.00 kB 16 2,023.50 kB 1,128,586.50 kB 17 23,824.50 kB 918,756.00 kB 18 590.50 kB 744,345.00 kB 19 160.50 kB 602,949.00 kB 20 412.00 kB 488,463.50 kB 21 237.50 kB 395,701.50 kB 22 793.00 kB 320,669.00 kB 23 239.00 kB 259,786.50 kB Aug 29 00 1,920.50 kB 210,740.00 kB 01 6,340.00 kB 171,398.00 kB 02 352.50 kB 139,452.00 kB 03 274,952.50 kB 522,342.50 kB 04 11,155.00 kB 424,260.50 kB 05 55,484.50 kB 352,787.50 kB 06 1,227.00 kB 288,308.50 kB 07 613.50 kB 233,668.50 kB 08 489.00 kB 199,309.00 kB 09 183,141.33 kB 495,784.67 kB 10 38,040.00 kB 384,941.00 kB 11 427.50 kB 314,295.00 kB 12 339.50 kB 254,643.00 kB 13 526.50 kB 206,328.50 kB 14 169.00 kB 175,981.00 kB 15 80,638.67 kB 214,367.67 kB 16 1,080.00 kB 164,720.50 kB 17 437.00 kB 133,594.50 kB 18 141.00 kB 108,236.50 kB 19 342.50 kB 87,736.50 kB 20 113.00 kB 74,824.00 kB 21 238,179.00 kB 582,157.00 kB 22 390.00 kB 448,506.50 kB 23 5,518.50 kB 364,227.50 kB Aug 30 00 3,333.00 kB 295,644.50 kB 01 441.50 kB 239,689.50 kB 02 1,826.50 kB 194,491.00 kB 03 275,072.00 kB 522,495.50 kB 04 4,812.00 kB 423,715.50 kB 05 2,105.50 kB 343,851.00 kB 06 1,008.00 kB 278,851.00 kB 07 2,697.50 kB 226,387.00 kB 08 11,034.00 kB 194,171.00 kB 09 181,758.33 kB 492,001.00 kB 10 332.50 kB 377,273.00 kB 11 4,884.50 kB 306,144.00 kB 12 21,657.50 kB 252,425.50 kB 13 1,164.00 kB 204,728.50 kB 14 800.50 kB 165,953.50 kB 15 8,020.00 kB 135,918.50 kB 16 301.50 kB 110,207.50 kB 17 350.00 kB 89,329.50 kB 18 7,190.00 kB 73,742.50 kB 19 114.00 kB 59,754.50 kB 20 125.00 kB 48,423.50 kB 21 155.50 kB 39,251.00 kB 22 386.50 kB 31,847.00 kB 23 188.50 kB 25,851.50 kB Aug 31 00 2,339.00 kB 22,284.00 kB 01 195,580.33 kB 529,701.00 kB 02 674.50 kB 406,196.50 kB 03 373.50 kB 329,117.50 kB 04 21,173.50 kB 270,607.50 kB 05 466.50 kB 219,260.00 kB 06 18,533.00 kB 181,155.50 kB 07 297.00 kB 146,792.00 kB 08 10,131.50 kB 120,802.50 kB 09 145.50 kB 97,901.00 kB 10 321.00 kB 79,362.00 kB 11 295.50 kB 64,324.00 kB 12 727.00 kB 52,228.00 kB 13 501.00 kB 42,402.00 kB 14 3,086.50 kB 34,718.00 kB 15 869.50 kB 28,498.50 kB 16 588.00 kB 23,190.50 kB 17 651.00 kB 18,906.00 kB 18 388.00 kB 15,410.00 kB 19 597.00 kB 12,596.00 kB 20 603.50 kB 10,318.00 kB 21 201.50 kB 8,403.50 kB 22 145.00 kB 6,837.50 kB 23 21,857.00 kB 24,612.00 kB -
Temporary Files
Size of temporary files
Key values
- 15.00 GiB Temp Files size Peak
- 2024-08-27 21:01:30 Date
Number of temporary files
Key values
- 21 per second Temp Files Peak
- 2024-08-28 03:35:10 Date
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size Aug 25 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Aug 26 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Aug 27 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 240 2.15 GiB 9.15 MiB 14 768 41.54 GiB 55.39 MiB 15 115 5.24 GiB 46.68 MiB 16 0 0 0 17 0 0 0 18 0 0 0 19 24 23.95 GiB 1021.78 MiB 20 48 47.13 GiB 1005.47 MiB 21 334 177.02 GiB 542.72 MiB 22 175 16.12 GiB 94.35 MiB 23 75 28.07 GiB 383.24 MiB Aug 28 00 91 2.92 GiB 32.89 MiB 01 0 0 0 02 0 0 0 03 644 107.03 GiB 170.18 MiB 04 337 45.42 GiB 138.01 MiB 05 0 0 0 06 8 7.91 GiB 1012.11 MiB 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 41 40.30 GiB 1006.63 MiB 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Aug 29 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Aug 30 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Aug 31 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Queries generating the most temporary files (N)
Rank Count Total size Min size Max size Avg size Query 1 1,193 67.70 GiB 8.00 KiB 1.00 GiB 58.11 MiB select * from pgbulkload.pg_bulkload (?);-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.GENE_DISEASE_REFERENCE,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.log,parse-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.DUPE}');
Date: 2024-08-27 21:12:36 Duration: 6m30s Database: ctdprd51 User: load Application: pg_bulkload
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.DAG_PATH,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.log,parse-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.DUPE}');
Date: 2024-08-27 21:39:50 Duration: 5m4s
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=edit.DB_LINK,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.log,parse-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.DUPE}');
Date: 2024-08-27 14:11:03 Duration: 3m51s
2 899 149.78 GiB 128.00 KiB 1.00 GiB 170.60 MiB vacuum full analyze;-
VACUUM FULL ANALYZE;
Date: 2024-08-28 04:14:26 Duration: 46m7s
-
VACUUM FULL ANALYZE;
Date: 2024-08-28 03:28:19 Duration: 0ms
3 68 67.67 GiB 686.82 MiB 1.00 GiB 1019.04 MiB select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.gene_go_annot gga, pub2.phenotype_term_reference ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in;-
select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.GENE_GO_ANNOT gga, pub2.PHENOTYPE_TERM_REFERENCE ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in;
Date: 2024-08-27 21:01:26 Duration: 0ms
4 62 1.98 GiB 6.98 MiB 1.00 GiB 32.65 MiB cluster pub2.term;-
CLUSTER pub2.TERM;
Date: 2024-08-28 03:27:41 Duration: 58s198ms
-
CLUSTER pub2.TERM;
Date: 2024-08-28 03:26:52 Duration: 0ms
5 48 47.13 GiB 134.70 MiB 1.00 GiB 1005.47 MiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.object_type where cd = ?), ptr.term_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.phenotype_term_reference ptr, pub2.phenotype_term_reference ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;-
select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;
Date: 2024-08-27 20:20:56 Duration: 0ms
6 41 40.30 GiB 312.02 MiB 1.00 GiB 1006.63 MiB select ;-
SELECT /* AllGDRelationsDAO */ ;
Date: 2024-08-28 13:03:18 Duration: 0ms
7 35 3.57 GiB 58.46 MiB 139.94 MiB 104.38 MiB vacuum full analyze db_link;-
vacuum FULL analyze db_link;
Date: 2024-08-27 15:19:38 Duration: 1m34s
-
vacuum FULL analyze db_link;
Date: 2024-08-27 15:18:21 Duration: 0ms
8 35 1.11 GiB 20.74 MiB 47.02 MiB 32.44 MiB vacuum full analyze ixn_actor;-
vacuum FULL analyze ixn_actor;
Date: 2024-08-27 15:17:39 Duration: 22s580ms
-
vacuum FULL analyze ixn_actor;
Date: 2024-08-27 15:17:23 Duration: 0ms
9 25 364.62 MiB 10.07 MiB 21.23 MiB 14.58 MiB vacuum full analyze ixn;-
vacuum FULL analyze ixn;
Date: 2024-08-27 15:17:55 Duration: 7s435ms
-
vacuum FULL analyze ixn;
Date: 2024-08-27 15:17:50 Duration: 0ms
10 25 15.77 GiB 8.00 KiB 1.00 GiB 645.75 MiB alter table pub2.term_enrichment_agent add constraint term_enrichment_agent_pk primary key (term_id, enriched_term_id, agent_term_id);-
ALTER TABLE pub2.term_enrichment_agent ADD CONSTRAINT term_enrichment_agent_pk PRIMARY KEY (term_id, enriched_term_id, agent_term_id);
Date: 2024-08-27 23:45:27 Duration: 2m56s
-
ALTER TABLE pub2.term_enrichment_agent ADD CONSTRAINT term_enrichment_agent_pk PRIMARY KEY (term_id, enriched_term_id, agent_term_id);
Date: 2024-08-27 23:45:26 Duration: 0ms
11 24 23.95 GiB 970.81 MiB 1.00 GiB 1021.78 MiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, to_char(cdr.mod_tm, ?) from pub2.gene_chem_reference gcr, pub2.chem_disease_reference cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = ? and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;-
select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;
Date: 2024-08-27 19:38:50 Duration: 0ms
12 20 12.38 GiB 8.00 KiB 1.00 GiB 633.76 MiB create unique index gene_disease_reference_ak1 on pub2.gene_disease_reference using btree (gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id);-
CREATE UNIQUE INDEX gene_disease_reference_ak1 ON pub2.gene_disease_reference USING btree (gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id);
Date: 2024-08-27 21:17:55 Duration: 2m55s
-
CREATE UNIQUE INDEX gene_disease_reference_ak1 ON pub2.gene_disease_reference USING btree (gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id);
Date: 2024-08-27 21:17:54 Duration: 0ms
13 20 710.06 MiB 21.70 MiB 59.05 MiB 35.50 MiB cluster pub2.term_label;-
CLUSTER pub2.TERM_LABEL;
Date: 2024-08-28 03:28:16 Duration: 35s257ms
-
CLUSTER pub2.TERM_LABEL;
Date: 2024-08-28 03:27:47 Duration: 0ms
14 20 215.40 MiB 6.84 MiB 16.38 MiB 10.77 MiB vacuum full analyze term;-
vacuum FULL analyze TERM;
Date: 2024-08-27 15:17:08 Duration: 9s534ms
-
vacuum FULL analyze TERM;
Date: 2024-08-27 15:17:00 Duration: 0ms
15 15 11.26 GiB 117.04 MiB 1.00 GiB 768.74 MiB create index ix_term_enrich_agent_enr_term on pub2.term_enrichment_agent using btree (enriched_term_id);-
CREATE INDEX ix_term_enrich_agent_enr_term ON pub2.term_enrichment_agent USING btree (enriched_term_id);
Date: 2024-08-27 23:47:11 Duration: 1m43s
-
CREATE INDEX ix_term_enrich_agent_enr_term ON pub2.term_enrichment_agent USING btree (enriched_term_id);
Date: 2024-08-27 23:47:10 Duration: 0ms
16 15 6.88 GiB 8.00 KiB 1.00 GiB 469.46 MiB alter table pub2.gene_disease_reference add constraint gene_disease_reference_pk primary key (id);-
ALTER TABLE pub2.gene_disease_reference ADD CONSTRAINT gene_disease_reference_pk PRIMARY KEY (id);
Date: 2024-08-27 21:14:59 Duration: 1m11s
-
ALTER TABLE pub2.gene_disease_reference ADD CONSTRAINT gene_disease_reference_pk PRIMARY KEY (id);
Date: 2024-08-27 21:14:59 Duration: 0ms Database: ctdprd51 User: pub2
17 10 6.88 GiB 278.39 MiB 1.00 GiB 704.18 MiB create index ix_gene_disease_ref_dis_gene on pub2.gene_disease_reference using btree (disease_id, gene_id);-
CREATE INDEX ix_gene_disease_ref_dis_gene ON pub2.gene_disease_reference USING btree (disease_id, gene_id);
Date: 2024-08-27 21:25:38 Duration: 1m47s
-
CREATE INDEX ix_gene_disease_ref_dis_gene ON pub2.gene_disease_reference USING btree (disease_id, gene_id);
Date: 2024-08-27 21:25:37 Duration: 0ms
18 10 6.88 GiB 278.23 MiB 1.00 GiB 704.18 MiB create index ix_gene_disease_ref_disease on pub2.gene_disease_reference using btree (disease_id);-
CREATE INDEX ix_gene_disease_ref_disease ON pub2.gene_disease_reference USING btree (disease_id);
Date: 2024-08-27 21:22:32 Duration: 1m24s
-
CREATE INDEX ix_gene_disease_ref_disease ON pub2.gene_disease_reference USING btree (disease_id);
Date: 2024-08-27 21:22:31 Duration: 0ms
19 10 6.88 GiB 357.93 MiB 1.00 GiB 704.18 MiB create index ix_gene_disease_ref_src_db on pub2.gene_disease_reference using btree (source_acc_db_id);-
CREATE INDEX ix_gene_disease_ref_src_db ON pub2.gene_disease_reference USING btree (source_acc_db_id);
Date: 2024-08-27 21:18:43 Duration: 48s146ms
-
CREATE INDEX ix_gene_disease_ref_src_db ON pub2.gene_disease_reference USING btree (source_acc_db_id);
Date: 2024-08-27 21:18:43 Duration: 0ms
20 10 6.88 GiB 337.52 MiB 1.00 GiB 704.18 MiB create index ix_gene_disease_ref_net_sc on pub2.gene_disease_reference using btree (network_score);-
CREATE INDEX ix_gene_disease_ref_net_sc ON pub2.gene_disease_reference USING btree (network_score);
Date: 2024-08-27 21:30:42 Duration: 2m21s
-
CREATE INDEX ix_gene_disease_ref_net_sc ON pub2.gene_disease_reference USING btree (network_score);
Date: 2024-08-27 21:30:41 Duration: 0ms
21 10 6.88 GiB 326.74 MiB 1.00 GiB 704.18 MiB create index ix_gene_disease_reference_ixn on pub2.gene_disease_reference using btree (ixn_id);-
CREATE INDEX ix_gene_disease_reference_ixn ON pub2.gene_disease_reference USING btree (ixn_id);
Date: 2024-08-27 21:26:57 Duration: 1m18s
-
CREATE INDEX ix_gene_disease_reference_ixn ON pub2.gene_disease_reference USING btree (ixn_id);
Date: 2024-08-27 21:26:56 Duration: 0ms
22 10 630.42 MiB 8.00 KiB 128.62 MiB 63.04 MiB alter table pub2.gene_disease add constraint gene_disease_pk primary key (gene_id, disease_id);-
ALTER TABLE pub2.gene_disease ADD CONSTRAINT gene_disease_pk PRIMARY KEY (gene_id, disease_id);
Date: 2024-08-28 00:00:47 Duration: 6s165ms
-
ALTER TABLE pub2.gene_disease ADD CONSTRAINT gene_disease_pk PRIMARY KEY (gene_id, disease_id);
Date: 2024-08-28 00:00:47 Duration: 0ms Database: ctdprd51 User: pub2
23 10 1.01 GiB 8.00 KiB 210.94 MiB 103.11 MiB alter table pub2.phenotype_term_reference add constraint phenotype_term_reference_pk primary key (id);-
ALTER TABLE pub2.phenotype_term_reference ADD CONSTRAINT phenotype_term_reference_pk PRIMARY KEY (id);
Date: 2024-08-27 21:30:54 Duration: 11s788ms
-
ALTER TABLE pub2.phenotype_term_reference ADD CONSTRAINT phenotype_term_reference_pk PRIMARY KEY (id);
Date: 2024-08-27 21:30:52 Duration: 0ms
24 10 157.30 MiB 8.00 KiB 31.95 MiB 15.73 MiB alter table pub2.term_enrichment add constraint term_enrichment_pk primary key (term_id, enriched_term_id);-
ALTER TABLE pub2.term_enrichment ADD CONSTRAINT term_enrichment_pk PRIMARY KEY (term_id, enriched_term_id);
Date: 2024-08-27 23:29:51 Duration: 3s106ms
-
ALTER TABLE pub2.term_enrichment ADD CONSTRAINT term_enrichment_pk PRIMARY KEY (term_id, enriched_term_id);
Date: 2024-08-27 23:29:51 Duration: 0ms Database: ctdprd51 User: pub2
25 10 242.40 MiB 8.00 KiB 50.26 MiB 24.24 MiB alter table pub2.chem_disease_reference add constraint chem_disease_reference_pk primary key (id);-
ALTER TABLE pub2.chem_disease_reference ADD CONSTRAINT chem_disease_reference_pk PRIMARY KEY (id);
Date: 2024-08-27 21:32:44 Duration: 2s299ms
-
ALTER TABLE pub2.chem_disease_reference ADD CONSTRAINT chem_disease_reference_pk PRIMARY KEY (id);
Date: 2024-08-27 21:32:44 Duration: 0ms
26 10 6.88 GiB 211.42 MiB 1.00 GiB 704.18 MiB create index ix_gene_disease_ref_source_cd on pub2.gene_disease_reference using btree (source_cd);-
CREATE INDEX ix_gene_disease_ref_source_cd ON pub2.gene_disease_reference USING btree (source_cd);
Date: 2024-08-27 21:19:40 Duration: 57s147ms
-
CREATE INDEX ix_gene_disease_ref_source_cd ON pub2.gene_disease_reference USING btree (source_cd);
Date: 2024-08-27 21:19:40 Duration: 0ms
27 10 6.88 GiB 345.96 MiB 1.00 GiB 704.18 MiB create index ix_gene_disease_ref_reference on pub2.gene_disease_reference using btree (reference_id);-
CREATE INDEX ix_gene_disease_ref_reference ON pub2.gene_disease_reference USING btree (reference_id);
Date: 2024-08-27 21:23:50 Duration: 1m18s
-
CREATE INDEX ix_gene_disease_ref_reference ON pub2.gene_disease_reference USING btree (reference_id);
Date: 2024-08-27 21:23:50 Duration: 0ms
28 10 6.88 GiB 350.92 MiB 1.00 GiB 704.18 MiB create index ix_gene_disease_ref_mod_tm on pub2.gene_disease_reference using btree (mod_tm);-
CREATE INDEX ix_gene_disease_ref_mod_tm ON pub2.gene_disease_reference USING btree (mod_tm);
Date: 2024-08-27 21:28:20 Duration: 1m23s
-
CREATE INDEX ix_gene_disease_ref_mod_tm ON pub2.gene_disease_reference USING btree (mod_tm);
Date: 2024-08-27 21:28:19 Duration: 0ms
29 10 63.08 MiB 8.00 KiB 13.01 MiB 6.31 MiB alter table pub2.phenotype_term add constraint phenotype_term_pk primary key (phenotype_id, term_id);-
ALTER TABLE pub2.phenotype_term ADD CONSTRAINT phenotype_term_pk PRIMARY KEY (phenotype_id, term_id);
Date: 2024-08-28 00:01:16 Duration: 0ms
30 10 441.56 MiB 8.00 KiB 89.55 MiB 44.16 MiB create unique index chem_disease_reference_ak1 on pub2.chem_disease_reference using btree (chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id);-
CREATE UNIQUE INDEX chem_disease_reference_ak1 ON pub2.chem_disease_reference USING btree (chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id);
Date: 2024-08-27 21:32:50 Duration: 5s897ms
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CREATE UNIQUE INDEX chem_disease_reference_ak1 ON pub2.chem_disease_reference USING btree (chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id);
Date: 2024-08-27 21:32:49 Duration: 0ms
31 10 6.88 GiB 340.24 MiB 1.00 GiB 704.18 MiB create index ix_gene_disease_ref_chem on pub2.gene_disease_reference using btree (via_chem_id);-
CREATE INDEX ix_gene_disease_ref_chem ON pub2.gene_disease_reference USING btree (via_chem_id);
Date: 2024-08-27 21:21:07 Duration: 1m26s
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CREATE INDEX ix_gene_disease_ref_chem ON pub2.gene_disease_reference USING btree (via_chem_id);
Date: 2024-08-27 21:21:07 Duration: 0ms
32 8 63.85 MiB 8.00 KiB 16.12 MiB 7.98 MiB alter table pub2.chem_disease add constraint chem_disease_pk primary key (chem_id, disease_id);-
ALTER TABLE pub2.chem_disease ADD CONSTRAINT chem_disease_pk PRIMARY KEY (chem_id, disease_id);
Date: 2024-08-28 00:01:19 Duration: 0ms
33 7 6.91 GiB 928.89 MiB 1.00 GiB 1010.41 MiB select pub2.maint_cached_value_refresh_data_metrics ();-
select pub2.maint_cached_value_refresh_data_metrics ();
Date: 2024-08-28 06:55:18 Duration: 33m21s
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select pub2.maint_cached_value_refresh_data_metrics ();
Date: 2024-08-28 06:51:05 Duration: 0ms
34 6 5.27 GiB 272.43 MiB 1.00 GiB 898.74 MiB select distinct ptr.phenotype_id, cdr.disease_id, ( select id from pub2.object_type where cd = ?), cdr.reference_id, ptr.reference_id, cdr.ixn_id, cdr.chem_id, ( select id from pub2.object_type where cd = ?), cdr.mod_tm from pub2.chem_disease_reference cdr, pub2.phenotype_term_reference ptr where cdr.chem_id = ptr.term_id;-
SELECT DISTINCT ptr.phenotype_id, cdr.disease_id, ( select id from pub2.OBJECT_TYPE where cd = 'disease'), cdr.reference_id, ptr.reference_id, cdr.ixn_id, cdr.chem_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), cdr.mod_tm FROM pub2.CHEM_DISEASE_REFERENCE cdr, pub2.PHENOTYPE_TERM_REFERENCE ptr WHERE cdr.chem_id = ptr.term_id;
Date: 2024-08-27 21:05:19 Duration: 0ms
35 5 219.59 MiB 42.92 MiB 45.20 MiB 43.92 MiB create index ix_term_enrich_corr_p_val on pub2.term_enrichment using btree (corrected_p_val);-
CREATE INDEX ix_term_enrich_corr_p_val ON pub2.term_enrichment USING btree (corrected_p_val);
Date: 2024-08-27 23:30:00 Duration: 4s745ms
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CREATE INDEX ix_term_enrich_corr_p_val ON pub2.term_enrichment USING btree (corrected_p_val);
Date: 2024-08-27 23:30:00 Duration: 0ms
36 5 242.35 MiB 45.48 MiB 50.22 MiB 48.47 MiB create index ix_chem_disease_ref_src_db on pub2.chem_disease_reference using btree (source_acc_db_id);-
CREATE INDEX ix_chem_disease_ref_src_db ON pub2.chem_disease_reference USING btree (source_acc_db_id);
Date: 2024-08-27 21:32:59 Duration: 1s911ms
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CREATE INDEX ix_chem_disease_ref_src_db ON pub2.chem_disease_reference USING btree (source_acc_db_id);
Date: 2024-08-27 21:32:59 Duration: 0ms
37 5 1.01 GiB 200.65 MiB 210.73 MiB 206.20 MiB create index ix_phenotype_term_ref_taxon_id on pub2.phenotype_term_reference using btree (taxon_id);-
CREATE INDEX ix_phenotype_term_ref_taxon_id ON pub2.phenotype_term_reference USING btree (taxon_id);
Date: 2024-08-27 21:31:39 Duration: 7s249ms
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CREATE INDEX ix_phenotype_term_ref_taxon_id ON pub2.phenotype_term_reference USING btree (taxon_id);
Date: 2024-08-27 21:31:39 Duration: 0ms
38 5 630.25 MiB 125.22 MiB 127.05 MiB 126.05 MiB create index ix_gene_disease_ind_chem_qty on pub2.gene_disease using btree (indirect_chem_qty) where (indirect_chem_qty > ?);-
CREATE INDEX ix_gene_disease_ind_chem_qty ON pub2.gene_disease USING btree (indirect_chem_qty) WHERE (indirect_chem_qty > 0);
Date: 2024-08-28 00:01:15 Duration: 6s771ms
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CREATE INDEX ix_gene_disease_ind_chem_qty ON pub2.gene_disease USING btree (indirect_chem_qty) WHERE (indirect_chem_qty > 0);
Date: 2024-08-28 00:01:15 Duration: 0ms
39 5 242.36 MiB 45.79 MiB 49.95 MiB 48.47 MiB create index ix_chem_disease_reference_ref on pub2.chem_disease_reference using btree (reference_id);-
CREATE INDEX ix_chem_disease_reference_ref ON pub2.chem_disease_reference USING btree (reference_id);
Date: 2024-08-27 21:32:55 Duration: 2s787ms
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CREATE INDEX ix_chem_disease_reference_ref ON pub2.chem_disease_reference USING btree (reference_id);
Date: 2024-08-27 21:32:55 Duration: 0ms
40 5 1.01 GiB 201.77 MiB 210.70 MiB 206.20 MiB create index ix_phenotype_term_reference_term_reference_id on pub2.phenotype_term_reference using btree (term_reference_id);-
CREATE INDEX ix_phenotype_term_reference_term_reference_id ON pub2.phenotype_term_reference USING btree (term_reference_id);
Date: 2024-08-27 21:32:05 Duration: 10s841ms
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CREATE INDEX ix_phenotype_term_reference_term_reference_id ON pub2.phenotype_term_reference USING btree (term_reference_id);
Date: 2024-08-27 21:32:05 Duration: 0ms
41 5 630.38 MiB 113.05 MiB 130.77 MiB 126.08 MiB create index ix_gene_disease_disease on pub2.gene_disease using btree (disease_id);-
CREATE INDEX ix_gene_disease_disease ON pub2.gene_disease USING btree (disease_id);
Date: 2024-08-28 00:01:07 Duration: 6s383ms
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CREATE INDEX ix_gene_disease_disease ON pub2.gene_disease USING btree (disease_id);
Date: 2024-08-28 00:01:07 Duration: 0ms
42 5 157.27 MiB 29.77 MiB 33.20 MiB 31.45 MiB create index ix_term_enrich_tgt_match on pub2.term_enrichment using btree (target_match_qty);-
CREATE INDEX ix_term_enrich_tgt_match ON pub2.term_enrichment USING btree (target_match_qty);
Date: 2024-08-27 23:29:54 Duration: 1s904ms
-
CREATE INDEX ix_term_enrich_tgt_match ON pub2.term_enrichment USING btree (target_match_qty);
Date: 2024-08-27 23:29:54 Duration: 0ms
43 5 242.34 MiB 46.38 MiB 49.41 MiB 48.47 MiB create index ix_chem_disease_ref_net_sc on pub2.chem_disease_reference using btree (network_score);-
CREATE INDEX ix_chem_disease_ref_net_sc ON pub2.chem_disease_reference USING btree (network_score);
Date: 2024-08-27 21:33:12 Duration: 5s21ms
-
CREATE INDEX ix_chem_disease_ref_net_sc ON pub2.chem_disease_reference USING btree (network_score);
Date: 2024-08-27 21:33:12 Duration: 0ms
44 5 40.00 KiB 8.00 KiB 8.00 KiB 8.00 KiB create index ix_gene_disease_exp_ref_qty on pub2.gene_disease using btree (exposure_reference_qty) where (exposure_reference_qty > ?);-
CREATE INDEX ix_gene_disease_exp_ref_qty ON pub2.gene_disease USING btree (exposure_reference_qty) WHERE (exposure_reference_qty > 0);
Date: 2024-08-28 00:01:15 Duration: 0ms
45 5 1.01 GiB 204.28 MiB 208.20 MiB 206.20 MiB create index ix_phenotype_term_ref_evidence_cd on pub2.phenotype_term_reference using btree (evidence_cd);-
CREATE INDEX ix_phenotype_term_ref_evidence_cd ON pub2.phenotype_term_reference USING btree (evidence_cd);
Date: 2024-08-27 21:31:47 Duration: 7s416ms
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CREATE INDEX ix_phenotype_term_ref_evidence_cd ON pub2.phenotype_term_reference USING btree (evidence_cd);
Date: 2024-08-27 21:31:47 Duration: 0ms
46 5 242.36 MiB 47.01 MiB 49.37 MiB 48.47 MiB create index ix_chem_disease_reference_ixn on pub2.chem_disease_reference using btree (ixn_id);-
CREATE INDEX ix_chem_disease_reference_ixn ON pub2.chem_disease_reference USING btree (ixn_id);
Date: 2024-08-27 21:33:05 Duration: 2s786ms
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CREATE INDEX ix_chem_disease_reference_ixn ON pub2.chem_disease_reference USING btree (ixn_id);
Date: 2024-08-27 21:33:05 Duration: 0ms
47 5 242.35 MiB 46.30 MiB 50.09 MiB 48.47 MiB create index ix_chem_disease_ref_mod_tm on pub2.chem_disease_reference using btree (mod_tm);-
CREATE INDEX ix_chem_disease_ref_mod_tm ON pub2.chem_disease_reference USING btree (mod_tm);
Date: 2024-08-27 21:33:07 Duration: 2s833ms
-
CREATE INDEX ix_chem_disease_ref_mod_tm ON pub2.chem_disease_reference USING btree (mod_tm);
Date: 2024-08-27 21:33:07 Duration: 0ms
48 5 157.27 MiB 29.72 MiB 32.68 MiB 31.45 MiB create index ix_term_enrich_enr_obj_type on pub2.term_enrichment using btree (enriched_object_type_id);-
CREATE INDEX ix_term_enrich_enr_obj_type ON pub2.term_enrichment USING btree (enriched_object_type_id);
Date: 2024-08-27 23:29:55 Duration: 1s127ms
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CREATE INDEX ix_term_enrich_enr_obj_type ON pub2.term_enrichment USING btree (enriched_object_type_id);
Date: 2024-08-27 23:29:55 Duration: 0ms
49 5 63.03 MiB 10.12 MiB 13.84 MiB 12.61 MiB create index ix_phenotype_term_term_id on pub2.phenotype_term using btree (term_id);-
CREATE INDEX ix_phenotype_term_term_id ON pub2.phenotype_term USING btree (term_id);
Date: 2024-08-28 00:01:17 Duration: 0ms
50 5 1.01 GiB 202.32 MiB 212.69 MiB 206.20 MiB create index ix_phenotype_term_reference_ixn_id on pub2.phenotype_term_reference using btree (ixn_id);-
CREATE INDEX ix_phenotype_term_reference_ixn_id ON pub2.phenotype_term_reference USING btree (ixn_id);
Date: 2024-08-27 21:32:16 Duration: 10s458ms
-
CREATE INDEX ix_phenotype_term_reference_ixn_id ON pub2.phenotype_term_reference USING btree (ixn_id);
Date: 2024-08-27 21:32:16 Duration: 0ms
51 5 1.01 GiB 189.69 MiB 217.08 MiB 206.20 MiB create index ix_phenotype_term_ref_reference_id on pub2.phenotype_term_reference using btree (reference_id);-
CREATE INDEX ix_phenotype_term_ref_reference_id ON pub2.phenotype_term_reference USING btree (reference_id);
Date: 2024-08-27 21:31:32 Duration: 10s794ms
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CREATE INDEX ix_phenotype_term_ref_reference_id ON pub2.phenotype_term_reference USING btree (reference_id);
Date: 2024-08-27 21:31:32 Duration: 0ms
52 5 63.04 MiB 11.55 MiB 13.55 MiB 12.61 MiB create index ix_phenotype_term_phenotype_id on pub2.phenotype_term using btree (phenotype_id);-
CREATE INDEX ix_phenotype_term_phenotype_id ON pub2.phenotype_term USING btree (phenotype_id);
Date: 2024-08-28 00:01:17 Duration: 0ms
53 5 157.26 MiB 28.73 MiB 33.29 MiB 31.45 MiB create index ix_term_enrich_obj_type on pub2.term_enrichment using btree (object_type_id);-
CREATE INDEX ix_term_enrich_obj_type ON pub2.term_enrichment USING btree (object_type_id);
Date: 2024-08-27 23:29:52 Duration: 1s172ms
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CREATE INDEX ix_term_enrich_obj_type ON pub2.term_enrichment USING btree (object_type_id);
Date: 2024-08-27 23:29:52 Duration: 0ms
54 5 1.41 GiB 283.84 MiB 301.17 MiB 289.38 MiB create index ix_phenotype_term_ref_ids on pub2.phenotype_term_reference using btree (phenotype_id, term_id, via_term_object_type_id, term_object_type_id);-
CREATE INDEX ix_phenotype_term_ref_ids ON pub2.phenotype_term_reference USING btree (phenotype_id, term_id, via_term_object_type_id, term_object_type_id);
Date: 2024-08-27 21:32:41 Duration: 14s272ms
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CREATE INDEX ix_phenotype_term_ref_ids ON pub2.phenotype_term_reference USING btree (phenotype_id, term_id, via_term_object_type_id, term_object_type_id);
Date: 2024-08-27 21:32:41 Duration: 0ms
55 5 1.01 GiB 202.66 MiB 207.34 MiB 206.20 MiB create index ix_phenotype_term_reference_source_acc_db_id on pub2.phenotype_term_reference using btree (source_acc_db_id);-
CREATE INDEX ix_phenotype_term_reference_source_acc_db_id ON pub2.phenotype_term_reference USING btree (source_acc_db_id);
Date: 2024-08-27 21:31:54 Duration: 7s667ms
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CREATE INDEX ix_phenotype_term_reference_source_acc_db_id ON pub2.phenotype_term_reference USING btree (source_acc_db_id);
Date: 2024-08-27 21:31:54 Duration: 0ms
56 5 242.35 MiB 46.41 MiB 52.34 MiB 48.47 MiB create index ix_chem_disease_reference_dis on pub2.chem_disease_reference using btree (disease_id);-
CREATE INDEX ix_chem_disease_reference_dis ON pub2.chem_disease_reference USING btree (disease_id);
Date: 2024-08-27 21:32:52 Duration: 2s757ms
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CREATE INDEX ix_chem_disease_reference_dis ON pub2.chem_disease_reference USING btree (disease_id);
Date: 2024-08-27 21:32:52 Duration: 0ms
57 5 242.35 MiB 46.34 MiB 49.58 MiB 48.47 MiB create index ix_chem_disease_ref_source_cd on pub2.chem_disease_reference using btree (source_cd);-
CREATE INDEX ix_chem_disease_ref_source_cd ON pub2.chem_disease_reference USING btree (source_cd);
Date: 2024-08-27 21:32:57 Duration: 1s940ms
-
CREATE INDEX ix_chem_disease_ref_source_cd ON pub2.chem_disease_reference USING btree (source_cd);
Date: 2024-08-27 21:32:57 Duration: 0ms
58 5 1.01 GiB 196.80 MiB 212.69 MiB 206.20 MiB create index ix_phenotype_term_ref_term_id on pub2.phenotype_term_reference using btree (term_id);-
CREATE INDEX ix_phenotype_term_ref_term_id ON pub2.phenotype_term_reference USING btree (term_id);
Date: 2024-08-27 21:31:12 Duration: 9s661ms
-
CREATE INDEX ix_phenotype_term_ref_term_id ON pub2.phenotype_term_reference USING btree (term_id);
Date: 2024-08-27 21:31:12 Duration: 0ms
59 5 1.01 GiB 197.30 MiB 217.72 MiB 206.20 MiB create index ixn_phenotype_term_ref_phenotype_id on pub2.phenotype_term_reference using btree (phenotype_id);-
CREATE INDEX ixn_phenotype_term_ref_phenotype_id ON pub2.phenotype_term_reference USING btree (phenotype_id);
Date: 2024-08-27 21:31:03 Duration: 9s145ms
-
CREATE INDEX ixn_phenotype_term_ref_phenotype_id ON pub2.phenotype_term_reference USING btree (phenotype_id);
Date: 2024-08-27 21:31:03 Duration: 0ms
60 5 1.01 GiB 200.09 MiB 211.81 MiB 206.20 MiB create index ix_phenotype_term_ref_object_type_id on pub2.phenotype_term_reference using btree (term_object_type_id);-
CREATE INDEX ix_phenotype_term_ref_object_type_id ON pub2.phenotype_term_reference USING btree (term_object_type_id);
Date: 2024-08-27 21:31:21 Duration: 8s724ms
-
CREATE INDEX ix_phenotype_term_ref_object_type_id ON pub2.phenotype_term_reference USING btree (term_object_type_id);
Date: 2024-08-27 21:31:21 Duration: 0ms
61 5 630.38 MiB 119.20 MiB 129.10 MiB 126.08 MiB create index ix_gene_disease_network_score on pub2.gene_disease using btree (network_score);-
CREATE INDEX ix_gene_disease_network_score ON pub2.gene_disease USING btree (network_score);
Date: 2024-08-28 00:01:01 Duration: 13s561ms
-
CREATE INDEX ix_gene_disease_network_score ON pub2.gene_disease USING btree (network_score);
Date: 2024-08-28 00:01:01 Duration: 0ms
62 5 219.57 MiB 43.01 MiB 44.77 MiB 43.91 MiB create index ix_term_enrich_raw_p_val on pub2.term_enrichment using btree (raw_p_val);-
CREATE INDEX ix_term_enrich_raw_p_val ON pub2.term_enrichment USING btree (raw_p_val);
Date: 2024-08-27 23:30:05 Duration: 4s761ms
-
CREATE INDEX ix_term_enrich_raw_p_val ON pub2.term_enrichment USING btree (raw_p_val);
Date: 2024-08-27 23:30:05 Duration: 0ms
63 5 680.00 KiB 128.00 KiB 144.00 KiB 136.00 KiB create index ix_gene_disease_cur_ref_qty on pub2.gene_disease using btree (curated_reference_qty) where (curated_reference_qty > ?);-
CREATE INDEX ix_gene_disease_cur_ref_qty ON pub2.gene_disease USING btree (curated_reference_qty) WHERE (curated_reference_qty > 0);
Date: 2024-08-28 00:01:08 Duration: 0ms
64 5 242.36 MiB 47.82 MiB 49.06 MiB 48.47 MiB create index ix_chem_disease_reference_gene on pub2.chem_disease_reference using btree (via_gene_id);-
CREATE INDEX ix_chem_disease_reference_gene ON pub2.chem_disease_reference USING btree (via_gene_id);
Date: 2024-08-27 21:33:02 Duration: 2s751ms
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CREATE INDEX ix_chem_disease_reference_gene ON pub2.chem_disease_reference USING btree (via_gene_id);
Date: 2024-08-27 21:33:02 Duration: 0ms
65 5 1.01 GiB 197.51 MiB 211.54 MiB 206.20 MiB create index ix_phenotype_term_ref_via_term_id on pub2.phenotype_term_reference using btree (via_term_id);-
CREATE INDEX ix_phenotype_term_ref_via_term_id ON pub2.phenotype_term_reference USING btree (via_term_id);
Date: 2024-08-27 21:32:27 Duration: 11s389ms
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CREATE INDEX ix_phenotype_term_ref_via_term_id ON pub2.phenotype_term_reference USING btree (via_term_id);
Date: 2024-08-27 21:32:27 Duration: 0ms
66 4 13.34 MiB 8.00 KiB 6.85 MiB 3.33 MiB alter table pub2.phenotype_term_axn add constraint phenotype_term_axn_pk primary key (phenotype_id, term_id, action_type_nm, action_degree_type_nm);-
ALTER TABLE pub2.phenotype_term_axn ADD CONSTRAINT phenotype_term_axn_pk PRIMARY KEY (phenotype_id, term_id, action_type_nm, action_degree_type_nm);
Date: 2024-08-28 00:01:18 Duration: 0ms
67 4 1.98 MiB 376.00 KiB 584.00 KiB 508.00 KiB create index ix_chem_disease_cur_ref_qty on pub2.chem_disease using btree (curated_reference_qty) where (curated_reference_qty > ?);-
CREATE INDEX ix_chem_disease_cur_ref_qty ON pub2.chem_disease USING btree (curated_reference_qty) WHERE (curated_reference_qty > 0);
Date: 2024-08-28 00:01:21 Duration: 0ms
68 4 32.00 KiB 8.00 KiB 8.00 KiB 8.00 KiB create index ix_chem_disease_exp_ref_qty on pub2.chem_disease using btree (exposure_reference_qty) where (exposure_reference_qty > ?);-
CREATE INDEX ix_chem_disease_exp_ref_qty ON pub2.chem_disease USING btree (exposure_reference_qty) WHERE (exposure_reference_qty > 0);
Date: 2024-08-28 00:01:22 Duration: 0ms
69 4 63.81 MiB 15.55 MiB 16.67 MiB 15.95 MiB create index ix_chem_disease_network_score on pub2.chem_disease using btree (network_score);-
CREATE INDEX ix_chem_disease_network_score ON pub2.chem_disease USING btree (network_score);
Date: 2024-08-28 00:01:21 Duration: 1s443ms
-
CREATE INDEX ix_chem_disease_network_score ON pub2.chem_disease USING btree (network_score);
Date: 2024-08-28 00:01:21 Duration: 0ms
70 4 62.93 MiB 15.48 MiB 16.05 MiB 15.73 MiB create index ix_chem_disease_ind_gene_qty on pub2.chem_disease using btree (indirect_gene_qty) where (indirect_gene_qty > ?);-
CREATE INDEX ix_chem_disease_ind_gene_qty ON pub2.chem_disease USING btree (indirect_gene_qty) WHERE (indirect_gene_qty > 0);
Date: 2024-08-28 00:01:22 Duration: 0ms
71 4 63.83 MiB 15.14 MiB 16.62 MiB 15.96 MiB create index ix_chem_disease_disease on pub2.chem_disease using btree (disease_id);-
CREATE INDEX ix_chem_disease_disease ON pub2.chem_disease USING btree (disease_id);
Date: 2024-08-28 00:01:21 Duration: 0ms
72 2 6.04 MiB 1.66 MiB 4.38 MiB 3.02 MiB create index ix_phenotype_term_axn_phenotype_id on pub2.phenotype_term_axn using btree (phenotype_id);-
CREATE INDEX ix_phenotype_term_axn_phenotype_id ON pub2.phenotype_term_axn USING btree (phenotype_id);
Date: 2024-08-28 00:01:18 Duration: 0ms
73 2 6.04 MiB 2.48 MiB 3.55 MiB 3.02 MiB create index ix_phenotype_term_axn_term_id on pub2.phenotype_term_axn using btree (term_id);-
CREATE INDEX ix_phenotype_term_axn_term_id ON pub2.phenotype_term_axn USING btree (term_id);
Date: 2024-08-28 00:01:19 Duration: 0ms
74 1 1.00 GiB 1.00 GiB 1.00 GiB 1.00 GiB select pub2.maint_phenotype_term_derive_data ( ) select lc_cum_type_nm, ?, count(*) from gene_chem_reference gcr union all select lc_cum_type_nm, ?, count(distinct gcr.gene_id) from gene_chem_reference gcr union all select lc_cum_type_nm, ?, count(distinct gcr.chem_id) from gene_chem_reference gcr union all select lc_cum_type_nm, ?, count(distinct gcr.taxon_id) from gene_chem_reference gcr where gcr.taxon_id is not null union all select lc_cum_type_nm, ?, count(distinct gcr.reference_id) from gene_chem_reference gcr union all select lc_cum_type_nm, ?, count(*) from gene_disease_reference gdr where gdr.source_cd in (...) union all select lc_cum_type_nm, ?, count(distinct gdr.gene_id) from gene_disease_reference gdr where gdr.source_cd in (...) union all select lc_cum_type_nm, ?, count(distinct gdr.disease_id) from gene_disease_reference gdr where gdr.source_cd in (...) union all select lc_cum_type_nm, ?, count(distinct gdr.gene_id || ? || gdr.disease_id) from gene_disease_reference gdr where gdr.source_cd = ? union all select lc_cum_type_nm, ?, count(distinct gdr.gene_id) from gene_disease_reference gdr where gdr.source_cd = ? union all select lc_cum_type_nm, ?, count(distinct gdr.disease_id) from gene_disease_reference gdr where gdr.source_cd = ? union all select lc_cum_type_nm, ?, count(*) from chem_disease_reference cdr where cdr.source_cd = ? union all select lc_cum_type_nm, ?, count(distinct cdr.chem_id || ? || cdr.disease_id) from chem_disease_reference cdr where cdr.source_cd = ? union all select lc_cum_type_nm, ? || lower(cdr.source_cd) || ?, count(distinct cdr.chem_id) "cdChemCount" from chem_disease_reference cdr where cdr.source_cd in (...) group by cdr.source_cd union all select lc_cum_type_nm, ? || lower(cdr.source_cd) || ?, count(distinct cdr.disease_id) from chem_disease_reference cdr where cdr.source_cd in (...) group by cdr.source_cd union all select lc_cum_type_nm, ?, count(*) from gene_go_annot gga union all select lc_cum_type_nm, ?, count(*) from term_pathway tp where tp.object_type_id = ( select ot.id from object_type ot where ot.cd = ?) union all select lc_cum_type_nm, ?, count(*) from term_enrichment te where te.object_type_id = ( select ot.id from object_type ot where ot.cd = ?) and te.enriched_object_type_id = ( select ot.id from object_type ot where ot.cd = ?) union all select lc_cum_type_nm, ?, count(*) from term_enrichment te where te.object_type_id = ( select ot.id from object_type ot where ot.cd = ?) and te.enriched_object_type_id = ( select ot.id from object_type ot where ot.cd = ?) union all select lc_cum_type_nm, ?, count(*) from ( select distinct tp.pathway_id, gcr.chem_id from term_pathway tp inner join gene_chem_reference gcr on tp.term_id = gcr.gene_id) i union all select lc_cum_type_nm, ?, count(*) from gene_gene_reference ggr union all select lc_cum_type_nm, ?, count(*) from ( select distinct tp.pathway_id, gd.disease_id from term_pathway tp inner join gene_disease gd on tp.term_id = gd.gene_id where gd.curated_reference_qty > ?) i union all select lc_cum_type_nm, ?, count(*) from ( select distinct phenotype_id, term_id from phenotype_term_reference where term_object_type_id = ( select id from object_type where cd = ?)) i union all select lc_cum_type_nm, ?, count(*) from reference r where r.has_ixns or r.has_diseases or r.has_phenotypes union all select lc_cum_type_nm, ?, count(*) from ( select gcr.chem_id from gene_chem_reference gcr union select cdr.chem_id from chem_disease_reference cdr where cdr.source_cd = ?) i union all select lc_cum_type_nm, ?, count(*) from ( select gcr.gene_id from gene_chem_reference gcr union select gdr.gene_id from gene_disease_reference gdr where gdr.source_cd in (...)) i union all select lc_cum_type_nm, ?, count(distinct gdr.gene_id) from gene_disease_reference gdr where gdr.source_cd = ? union all select lc_cum_type_nm, ?, count(*) from ( select cdr.disease_id from chem_disease_reference cdr where cdr.source_cd = ? union select gdr.disease_id from gene_disease_reference gdr where gdr.source_cd in (...)) i union all select lc_cum_type_nm, ?, count(distinct gdr.disease_id) from gene_disease_reference gdr where gdr.source_cd = ? union all select lc_cum_type_nm, ?, count(*) from ( select distinct stressorterm.nm exposurestressorname, stressorterm.acc_txt exposurestressorid, ( select string_agg(distinct stressorsrctype.nm, ?)) stressorsourcecategory, stressor.src_details stressorsourcedetails, stressor.sample_qty numberofstressorsamples, stressor.note stressornotes, receptor.qty numberofreceptors, concat(receptor.description || ?, receptorterm.nm) receptors, receptor.note receptornotes, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm, ?)) smokingstatus, receptor.age age, receptor.age_uom_nm ageunitsofmeasurement, receptor.age_qualifier_nm agequalifier, receptor.gender_nm sex, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) race, ( select string_agg(distinct eventassaymethod.nm, ?)) methods, event.detection_limit detectionlimit, event.detection_limit_uom detectionlimituom, event.detection_freq detectionfrequency, event.medium_nm medium, exposuremarkerterm.nm exposuremarker, exposuremarkerterm.acc_txt exposuremarkerid, event.exp_marker_lvl markerlevel, assay_uom markerunitsofmeasurement, assay_measurement_stat markermeasurementstatistic, assay_note assaynotes, ( select string_agg(distinct country.nm, ?)) studycountries, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) citytownregionarea, event.note exposureeventnotes, eiot.description outcomerelationship, diseaseterm.nm diseasename, diseaseterm.acc_txt diseaseid, phenotypeterm.nm phenotypename, phenotypeterm.acc_txt phenotypeid, outcome.phenotype_action_degree_type_nm phenotypeactiondegreetype, ( select string_agg(distinct anatomyterm.nm, ?)) anatomy, outcome.note exposureoutcomenotes, e.reference_acc_txt reference, ( select string_agg(distinct eventproject.project_nm, ?)) associatedstudytitles, event.collection_start_yr enrollmentstartyear, event.collection_end_yr enrollmentendyear, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) studyfactors, eventlocation.exp_event_id ignorecolumneventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id group by exposurestressorname, exposurestressorid, stressorsourcedetails, numberofstressorsamples, stressornotes, numberofreceptors, receptors, receptornotes, medium, exposuremarker, exposuremarkerid, markerlevel, markerunitsofmeasurement, markermeasurementstatistic, assaynotes, outcomerelationship, diseasename, diseaseid, phenotypename, phenotypeid, phenotypeactiondegreetype, reference, enrollmentstartyear, enrollmentendyear, age, ageunitsofmeasurement, agequalifier, sex, detectionlimit, detectionlimituom, detectionfrequency, exposureeventnotes, exposureoutcomenotes, ignorecolumneventid) as exp_c_evnt_count union all select lc_cum_type_nm, ?, count(distinct chemterm.id) from term chemterm where id in ( select event.exp_marker_term_id from exp_event event where event.exp_marker_type_id in ( select id from exp_marker_type where nm like ?) union select chem_id from exp_stressor) union all select lc_cum_type_nm, ?, count(distinct geneterm.id) from term geneterm where id in ( select event.exp_marker_term_id from exp_event event where event.exp_marker_type_id in ( select id from exp_marker_type where nm like ?) union select distinct term_id from exp_receptor where object_type_id is not null and object_type_id = ( select id from object_type where cd = ?)) union all select lc_cum_type_nm, ?, count(distinct diseaseterm.id) from term diseaseterm where id in ( select disease_id from exp_outcome union select distinct term_id from exp_receptor where object_type_id is not null and object_type_id = ( select id from object_type where cd = ?)) union all select lc_cum_type_nm, ?, count(distinct phenotypeterm.id) from term phenotypeterm where id in ( select phenotype_id from exp_outcome union select distinct term_id from exp_receptor where object_type_id is not null and object_type_id = ( select id from object_type where cd = ?)) union all select lc_cum_type_nm, ?, count(distinct reference_id) from reference_exp union all select lc_cum_type_nm, ?, count(*) from phenotype_term_reference ptr where ptr.source_cd = ? and term_object_type_id = ( select ot.id from object_type ot where ot.cd = ?) union all select lc_cum_type_nm, ?, count(distinct ptr.term_id) from phenotype_term_reference ptr where ptr.source_cd in (...) and term_object_type_id = ( select ot.id from object_type ot where ot.cd = ?) union all select lc_cum_type_nm, ?, count(distinct ptr.term_id) from phenotype_term_reference ptr where ptr.source_cd in (...) and term_object_type_id = ( select ot.id from object_type ot where ot.cd = ?) union all select lc_cum_type_nm, ?, count(distinct ptr.phenotype_id) from phenotype_term_reference ptr where ptr.source_cd in (...) union all select lc_cum_type_nm, ?, count(distinct ptr.taxon_id) from phenotype_term_reference ptr where ptr.source_cd in (...) union all select lc_cum_type_nm, ?, count(distinct ia.anatomy_id) from ixn_anatomy ia ";-
select pub2.maint_phenotype_term_derive_data ( ) SELECT lc_cum_type_nm, 'gc_c_ixn_count', COUNT(*) -- Not distincted. FROM gene_chem_reference gcr UNION ALL SELECT lc_cum_type_nm, 'gc_c_gene_count', COUNT(DISTINCT gcr.gene_id) FROM gene_chem_reference gcr UNION ALL SELECT lc_cum_type_nm, 'gc_c_chem_count', COUNT(DISTINCT gcr.chem_id) FROM gene_chem_reference gcr UNION ALL SELECT lc_cum_type_nm, 'gc_taxon_count', COUNT(DISTINCT gcr.taxon_id) FROM gene_chem_reference gcr WHERE gcr.taxon_id IS NOT NULL UNION ALL SELECT lc_cum_type_nm, 'gc_c_ref_count', COUNT(DISTINCT gcr.reference_id) FROM gene_chem_reference gcr UNION ALL SELECT lc_cum_type_nm, 'gd_d_ixn_count', COUNT(*) -- Not distincted. FROM gene_disease_reference gdr WHERE gdr.source_cd IN ('C', 'O') UNION ALL SELECT lc_cum_type_nm, 'gd_d_gene_count', COUNT(DISTINCT gdr.gene_id) FROM gene_disease_reference gdr WHERE gdr.source_cd IN ('C', 'O') UNION ALL SELECT lc_cum_type_nm, 'gd_d_disease_count', COUNT(DISTINCT gdr.disease_id) FROM gene_disease_reference gdr WHERE gdr.source_cd IN ('C', 'O') UNION ALL SELECT lc_cum_type_nm, 'gd_i_ixn_count', COUNT(DISTINCT gdr.gene_id || '|' || gdr.disease_id) -- Inferreds must be distincted. FROM gene_disease_reference gdr WHERE gdr.source_cd = 'I' UNION ALL SELECT lc_cum_type_nm, 'gd_i_gene_count', COUNT(DISTINCT gdr.gene_id) FROM gene_disease_reference gdr WHERE gdr.source_cd = 'I' UNION ALL SELECT lc_cum_type_nm, 'gd_i_disease_count', COUNT(DISTINCT gdr.disease_id) FROM gene_disease_reference gdr WHERE gdr.source_cd = 'I' UNION ALL SELECT lc_cum_type_nm, 'cd_c_ixn_count', COUNT(*) -- Not distincted. FROM chem_disease_reference cdr WHERE cdr.source_cd = 'C' UNION ALL SELECT lc_cum_type_nm, 'cd_i_ixn_count', COUNT(DISTINCT cdr.chem_id || '|' || cdr.disease_id) -- Inferreds must be distincted. FROM chem_disease_reference cdr WHERE cdr.source_cd = 'I' UNION ALL SELECT lc_cum_type_nm, 'cd_' || LOWER(cdr.source_cd) || '_chem_count', COUNT(DISTINCT cdr.chem_id) "cdChemCount" FROM chem_disease_reference cdr WHERE cdr.source_cd IN ('C', 'I') GROUP BY cdr.source_cd UNION ALL SELECT lc_cum_type_nm, 'cd_' || LOWER(cdr.source_cd) || '_disease_count', COUNT(DISTINCT cdr.disease_id) FROM chem_disease_reference cdr WHERE cdr.source_cd IN ('C', 'I') GROUP BY cdr.source_cd UNION ALL -- direct gene-go SELECT lc_cum_type_nm, 'ggo_d_count', COUNT(*) FROM gene_go_annot gga UNION ALL -- direct gene_pathway SELECT lc_cum_type_nm, 'gp_d_count', COUNT(*) FROM term_pathway tp WHERE tp.object_type_id = ( SELECT ot.id FROM object_type ot WHERE ot.cd = 'gene') UNION ALL -- enriched chem-go SELECT lc_cum_type_nm, 'cgo_e_count', COUNT(*) FROM term_enrichment te WHERE te.object_type_id = ( SELECT ot.id FROM object_type ot WHERE ot.cd = 'chem') AND te.enriched_object_type_id = ( SELECT ot.id FROM object_type ot WHERE ot.cd = 'go') UNION ALL -- enriched chem-pathway SELECT lc_cum_type_nm, 'cp_e_count', COUNT(*) FROM term_enrichment te WHERE te.object_type_id = ( SELECT ot.id FROM object_type ot WHERE ot.cd = 'chem') AND te.enriched_object_type_id = ( SELECT ot.id FROM object_type ot WHERE ot.cd = 'pathway') UNION ALL -- inferred chem-pathway SELECT lc_cum_type_nm, 'cp_i_count', COUNT(*) FROM ( SELECT DISTINCT tp.pathway_id, gcr.chem_id FROM term_pathway tp INNER JOIN gene_chem_reference gcr on tp.term_id = gcr.gene_id) i UNION ALL -- gene-gene ixns SELECT lc_cum_type_nm, 'gg_c_ixn_count', COUNT(*) -- Not distincted. FROM gene_gene_reference ggr UNION ALL -- inferred disease_pathway SELECT lc_cum_type_nm, 'dp_i_count', COUNT(*) FROM ( SELECT DISTINCT tp.pathway_id, gd.disease_id FROM term_pathway tp INNER JOIN gene_disease gd on tp.term_id = gd.gene_id WHERE gd.curated_Reference_qty > 0) i UNION ALL -- inferred disease-go SELECT lc_cum_type_nm, 'dgo_i_count', COUNT(*) FROM ( SELECT DISTINCT phenotype_id, term_id FROM phenotype_term_reference WHERE term_object_type_id = ( select id from object_type where cd = 'disease')) i UNION ALL -- curated references SELECT lc_cum_type_nm, 'curated_ref_count', COUNT(*) FROM reference r WHERE r.has_ixns OR r.has_diseases OR r.has_phenotypes UNION ALL -- curated chemicals SELECT lc_cum_type_nm, 'curated_chem_count', COUNT(*) FROM ( SELECT gcr.chem_id FROM gene_chem_reference gcr UNION SELECT cdr.chem_id FROM chem_disease_reference cdr WHERE cdr.source_cd = 'C') i UNION ALL -- curated genes SELECT lc_cum_type_nm, 'curated_gene_count', COUNT(*) FROM ( SELECT gcr.gene_id FROM gene_chem_reference gcr UNION SELECT gdr.gene_id FROM gene_disease_reference gdr WHERE gdr.source_cd IN ('C', 'O')) i UNION ALL -- omim-curated genes SELECT lc_cum_type_nm, 'omim_gene_count', COUNT(DISTINCT gdr.gene_id) FROM gene_disease_reference gdr WHERE gdr.source_cd = 'O' UNION ALL -- curated diseases SELECT lc_cum_type_nm, 'curated_disease_count', COUNT(*) FROM ( SELECT cdr.disease_id FROM chem_disease_reference cdr WHERE cdr.source_cd = 'C' UNION SELECT gdr.disease_id FROM gene_disease_reference gdr WHERE gdr.source_cd IN ('C', 'O')) i UNION ALL -- omim-curated diseases SELECT lc_cum_type_nm, 'omim_disease_count', COUNT(DISTINCT gdr.disease_id) FROM gene_disease_reference gdr WHERE gdr.source_cd = 'O' -- ---------------------------------------- -- START: Exposure-related statistics -- ---------------------------------------- UNION ALL -- ---------------------------------------- SELECT lc_cum_type_nm, 'exp_c_evnt_count', count(*) from ( /* NOTE: The 'exp_c_evnt_count' is intended to match the Exposure statement download file - consequently, the queries between the report and this function must match. Changes to one necessitates changes to the other. */ SELECT DISTINCT /* AllExposuresDAO */ stressorTerm.nm ExposureStressorName, stressorTerm.acc_txt ExposureStressorID, ( SELECT STRING_AGG(distinct stressorSrcType.nm, '|')) StressorSourceCategory, stressor.src_details StressorSourceDetails, stressor.sample_qty NumberOfStressorSamples, stressor.note StressorNotes, receptor.qty NumberOfReceptors, concat(receptor.description || ' ', receptorTerm.nm) Receptors, receptor.note ReceptorNotes, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm, ' | ')) SmokingStatus, receptor.age Age, receptor.age_uom_nm AgeUnitsOfMeasurement, receptor.age_qualifier_nm AgeQualifier, receptor.gender_nm Sex, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || ' ' || receptorRace.pct, ' | ')) Race, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) Methods, event.detection_limit DetectionLimit, event.detection_limit_uom DetectionLimitUOM, event.detection_freq DetectionFrequency, event.medium_nm Medium, exposureMarkerTerm.nm ExposureMarker, exposureMarkerTerm.acc_txt ExposureMarkerID, event.exp_marker_lvl MarkerLevel, assay_uom MarkerUnitsOfMeasurement, assay_measurement_stat MarkerMeasurementStatistic, assay_note AssayNotes, ( SELECT STRING_AGG(distinct country.nm, ' | ')) StudyCountries, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) StateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) CityTownRegionArea, event.note ExposureEventNotes, eiot.description OutcomeRelationship, diseaseTerm.nm DiseaseName, diseaseTerm.acc_txt DiseaseID, phenotypeTerm.nm PhenotypeName, phenotypeTerm.acc_txt PhenotypeID, outcome.phenotype_action_degree_type_nm PhenotypeActionDegreeType, ( SELECT STRING_AGG(DISTINCT anatomyTerm.nm, ' | ')) Anatomy, outcome.note ExposureOutcomeNotes, e.reference_acc_txt Reference, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) AssociatedStudyTitles, event.collection_start_yr EnrollmentStartYear, event.collection_end_yr EnrollmentEndYear, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) StudyFactors, eventLocation.exp_event_id ignorecolumneventID, COUNT(*) OVER () fullRowCount -- take this out of final report query FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id GROUP BY ExposureStressorName, ExposureStressorID, StressorSourceDetails, NumberOfStressorSamples, StressorNotes, NumberOfReceptors, Receptors, ReceptorNotes, Medium, ExposureMarker, ExposureMarkerID, MarkerLevel, MarkerUnitsOfMeasurement, MarkerMeasurementStatistic, AssayNotes, OutcomeRelationship, DiseaseName, DiseaseID, PhenotypeName, PhenotypeID, PhenotypeActionDegreeType, Reference, EnrollmentStartYear, EnrollmentEndYear, Age, AgeUnitsOfMeasurement, AgeQualifier, Sex, DetectionLimit, DetectionLimitUOM, DetectionFrequency, ExposureEventNotes, ExposureOutcomeNotes, ignorecolumneventID) as exp_c_evnt_count -- ---------------------------------------- -- ---------------------------------------- UNION ALL SELECT lc_cum_type_nm, 'exp_c_chem_count', COUNT(distinct chemTerm.id) FROM term chemTerm WHERE id IN ( select event.exp_marker_term_id from exp_event event where event.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') UNION SELECT chem_id FROM exp_stressor) UNION ALL SELECT lc_cum_type_nm, 'exp_c_gene_count', COUNT(distinct geneTerm.id) FROM term geneTerm WHERE id IN ( select event.exp_marker_term_id from exp_event event where event.exp_marker_type_id in ( select id from exp_marker_type where nm like 'gene%') union select distinct term_id from exp_receptor where object_type_id is not null and object_type_id = ( select id from object_type where cd = 'gene')) UNION ALL SELECT lc_cum_type_nm, 'exp_c_disease_count', COUNT(distinct diseaseTerm.id) FROM term diseaseTerm WHERE id IN ( SELECT disease_id FROM exp_outcome union select distinct term_id from exp_receptor where object_type_id is not null and object_type_id = ( select id from object_type where cd = 'disease')) UNION ALL SELECT lc_cum_type_nm, 'exp_c_phenotype_count', COUNT(distinct phenotypeTerm.id) FROM term phenotypeTerm WHERE id IN ( SELECT phenotype_id FROM exp_outcome union select distinct term_id from exp_receptor where object_type_id is not null and object_type_id = ( select id from object_type where cd = 'go')) union all SELECT lc_cum_type_nm, 'exp_reference_count', COUNT(distinct reference_id) FROM reference_exp -- ---------------------------------------- -- END: Exposure-related statistics -- ---------------------------------------- -- ---------------------------------------- -- START: Phenotype-related statistics -- ---------------------------------------- UNION ALL -- ---------------------------------------- SELECT lc_cum_type_nm, 'pheno_ixn_count', COUNT(*) -- Not distincted. FROM phenotype_term_reference ptr WHERE ptr.source_cd = 'C' and term_object_type_id = ( SELECT ot.id FROM object_type ot WHERE ot.cd = 'chem') UNION ALL -- unique phenotype gene count SELECT lc_cum_type_nm, 'pheno_c_gene_count', COUNT(DISTINCT ptr.term_id) FROM phenotype_term_reference ptr where ptr.source_cd IN ('C') and term_object_type_id = ( SELECT ot.id FROM object_type ot WHERE ot.cd = 'gene') UNION ALL -- unique phenotype chemical count SELECT lc_cum_type_nm, 'pheno_c_chem_count', COUNT(DISTINCT ptr.term_id) FROM phenotype_term_reference ptr where ptr.source_cd IN ('C') and term_object_type_id = ( SELECT ot.id FROM object_type ot WHERE ot.cd = 'chem') UNION ALL -- unique phenotype GO count SELECT lc_cum_type_nm, 'pheno_c_go_count', COUNT(DISTINCT ptr.phenotype_id) FROM phenotype_term_reference ptr where ptr.source_cd IN ('C') UNION ALL -- unique taxon count SELECT lc_cum_type_nm, 'pheno_c_taxon_count', COUNT(DISTINCT ptr.taxon_id) FROM phenotype_term_reference ptr where ptr.source_cd IN ('C') UNION ALL -- unique anatomy count SELECT lc_cum_type_nm, 'pheno_c_anatomy_count', COUNT(DISTINCT ia.anatomy_id) FROM ixn_anatomy ia ";
Date: 2024-08-28 06:51:05 Duration: 0ms
Queries generating the largest temporary files
Rank Size Query 1 1.00 GiB SELECT * FROM pgbulkload.pg_bulkload ($1);[ Date: 2024-08-27 14:35:32 - Database: ctdprd51 - User: load - Application: pg_bulkload ]
2 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-08-27 19:38:50 ]
3 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-08-27 19:38:50 ]
4 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-08-27 19:38:50 ]
5 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-08-27 19:38:50 ]
6 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-08-27 19:38:50 ]
7 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-08-27 19:38:50 ]
8 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-08-27 19:38:50 ]
9 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-08-27 19:38:50 ]
10 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-08-27 19:38:50 ]
11 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-08-27 19:38:50 ]
12 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-08-27 19:38:51 ]
13 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-08-27 19:38:51 ]
14 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-08-27 19:38:51 ]
15 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-08-27 19:38:51 ]
16 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-08-27 19:38:51 ]
17 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-08-27 19:38:51 ]
18 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-08-27 19:38:51 ]
19 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-08-27 19:38:51 ]
20 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn;[ Date: 2024-08-27 19:38:51 ]
-
Vacuums
Vacuums / Analyzes Distribution
Key values
- 386.55 sec Highest CPU-cost vacuum
Table pub2.gene_disease
Database ctdprd51 - 2024-08-28 00:42:31 Date
- 0 sec Highest CPU-cost analyze
Table
Database ctdprd51 - Date
Average Autovacuum Duration
Key values
- 386.55 sec Highest CPU-cost vacuum
Table pub2.gene_disease
Database ctdprd51 - 2024-08-28 00:42:31 Date
Analyzes per table
Key values
- pubc.log_query (119) Main table analyzed (database ctdprd51)
- 238 analyzes Total
Table Number of analyzes ctdprd51.pubc.log_query 119 ctdprd51.pub2.term_set_enrichment 12 ctdprd51.pub2.term_set_enrichment_agent 9 ctdprd51.pg_catalog.pg_class 5 ctdprd51.pub2.term 4 ctdprd51.pub1.term_set_enrichment_agent 3 ctdprd51.pub2.term_comp_agent 3 ctdprd51.pub2.reference 3 ctdprd51.pg_catalog.pg_attribute 3 ctdprd51.pg_catalog.pg_index 3 postgres.pg_catalog.pg_shdepend 2 ctdprd51.pub2.phenotype_term 2 ctdprd51.pub1.term_set_enrichment 2 ctdprd51.pub2.db 2 ctdprd51.pg_catalog.pg_type 2 ctdprd51.pg_catalog.pg_depend 2 ctdprd51.pub2.dag_node 2 ctdprd51.edit.action_type 1 ctdprd51.load.data_load 1 ctdprd51.pub2.gene_chem_ref_gene_form 1 ctdprd51.pub2.action_type 1 ctdprd51.edit.db_link 1 ctdprd51.pub2.img 1 ctdprd51.pub2.geographic_region 1 ctdprd51.pub2.exp_receptor_tobacco_use 1 ctdprd51.pub2.gene_go_annot 1 ctdprd51.pg_catalog.pg_shdepend 1 ctdprd51.pub2.gene_disease 1 ctdprd51.pub2.exp_receptor_gender 1 ctdprd51.pub2.gene_gene 1 ctdprd51.pub2.exp_receptor 1 ctdprd51.pub2.exp_study_factor 1 ctdprd51.pub2.exp_event_assay_method 1 ctdprd51.pub2.exp_outcome 1 ctdprd51.edit.action_degree 1 ctdprd51.pg_catalog.pg_description 1 ctdprd51.pub2.country 1 ctdprd51.edit.reference_db_link 1 ctdprd51.pg_catalog.pg_trigger 1 ctdprd51.pub2.term_pathway 1 ctdprd51.edit.object_note 1 ctdprd51.edit.race 1 ctdprd51.pub2.gene_gene_ref_throughput 1 ctdprd51.pub2.term_label 1 ctdprd51.pub2.reference_exp 1 ctdprd51.pub2.db_report 1 ctdprd51.edit.db_report 1 ctdprd51.edit.list_db_report 1 ctdprd51.pub2.slim_term_mapping 1 ctdprd51.pub2.exp_anatomy 1 ctdprd51.edit.country 1 ctdprd51.pub2.exp_event 1 ctdprd51.pg_catalog.pg_constraint 1 ctdprd51.edit.action_type_path 1 ctdprd51.pub2.exp_event_location 1 ctdprd51.pub2.reference_party 1 ctdprd51.pub2.db_report_site 1 ctdprd51.pub2.reference_party_role 1 ctdprd51.pub2.exposure 1 ctdprd51.edit.age_uom 1 ctdprd51.pub2.medium 1 ctdprd51.pg_catalog.pg_attrdef 1 ctdprd51.edit.db_report_site 1 ctdprd51.pub2.chem_disease 1 ctdprd51.pub2.list_db_report 1 ctdprd51.pub2.exp_stressor 1 ctdprd51.pub2.dag_edge 1 ctdprd51.pub2.db_link 1 ctdprd51.pub2.gene_taxon 1 ctdprd51.pub2.term_reference 1 ctdprd51.pub2.gene_gene_reference 1 ctdprd51.pub2.ixn 1 ctdprd51.edit.db 1 ctdprd51.pub2.term_comp 1 ctdprd51.pub2.exp_receptor_race 1 ctdprd51.pub2.exp_event_project 1 ctdprd51.pub2.exp_stressor_stressor_src 1 Total 238 Vacuums per table
Key values
- pub2.term (35) Main table vacuumed on database ctdprd51
- 242 vacuums Total
Index Buffer usage Skipped WAL usage Table Vacuums scans hits misses dirtied pins frozen records full page bytes ctdprd51.pub2.term 35 2 7,182,143 0 458,304 0 0 865,977 467,643 1,910,502,399 ctdprd51.pubc.log_query 34 11 10,716 0 996 0 1 1,772 528 2,874,358 ctdprd51.pub2.reference 32 2 5,905,301 0 142,542 11 0 400,330 130,262 367,803,398 ctdprd51.pub2.dag_node 31 1 5,185,744 0 184,090 0 0 314,128 145,549 451,515,962 ctdprd51.pub2.chem_disease 29 1 3,014,853 0 88,091 0 0 161,374 63,548 213,631,485 ctdprd51.pub2.term_set_enrichment 7 0 4,969 0 546 0 0 2,129 13 208,112 ctdprd51.pub2.term_set_enrichment_agent 6 0 194,960 0 5,692 0 0 97,337 8 5,809,791 ctdprd51.pg_catalog.pg_statistic 5 5 3,140 0 507 0 105 1,855 409 1,955,868 ctdprd51.pg_catalog.pg_attribute 3 3 1,745 0 245 0 123 750 207 936,582 ctdprd51.pg_toast.pg_toast_2619 3 3 11,617 0 4,393 0 30,708 10,319 2,233 1,467,801 ctdprd51.pg_catalog.pg_class 3 3 876 0 103 0 0 482 97 477,153 postgres.pg_catalog.pg_shdepend 2 2 276 0 110 0 0 165 75 303,430 ctdprd51.pub2.phenotype_term 2 2 943,496 0 129,496 0 0 757,522 106,008 273,693,137 ctdprd51.pub2.term_label 1 0 180,277 0 6 0 0 90,088 4 5,343,217 ctdprd51.pub2.gene_gene_ref_throughput 1 0 14,417 0 4 0 0 7,186 2 436,321 ctdprd51.pub2.db 1 1 147 0 3 0 0 17 1 11,366 ctdprd51.pub2.ixn 1 1 1,451,839 0 107,792 0 0 970,236 59 66,753,330 ctdprd51.pub2.gene_gene_reference 1 0 30,096 0 3 0 0 14,986 1 892,593 ctdprd51.pub2.reference_exp 1 0 326 0 3 0 0 1 1 2,405 ctdprd51.pg_catalog.pg_index 1 1 169 0 23 0 0 104 20 99,580 ctdprd51.pg_toast.pg_toast_6007961 1 1 112 0 4 0 0 49 4 18,641 ctdprd51.edit.db_report 1 0 96 0 1 0 0 9 1 9,438 ctdprd51.pub2.slim_term_mapping 1 0 634 0 4 0 0 262 2 26,001 ctdprd51.pub2.exp_receptor_race 1 0 1,319 0 2 0 0 1 0 281 ctdprd51.pub2.exp_event_project 1 0 2,018 0 2 0 0 1 0 281 ctdprd51.pub2.exp_stressor_stressor_src 1 0 2,575 0 0 0 0 1 0 281 ctdprd51.pub2.exp_anatomy 1 0 125 0 2 0 0 1 0 281 ctdprd51.pg_toast.pg_toast_6008030 1 0 87,403 0 4 0 0 43,694 2 2,594,469 ctdprd51.pub2.exp_outcome 1 0 579 0 2 0 0 1 0 281 ctdprd51.pub2.exp_stressor 1 0 6,013 0 2 0 0 1 0 281 ctdprd51.pub2.dag_edge 1 0 1,053 0 5 0 0 482 2 40,677 ctdprd51.pg_catalog.pg_depend 1 1 584 0 71 0 65 281 76 273,762 ctdprd51.pg_catalog.pg_description 1 1 221 0 28 0 42 118 19 108,517 ctdprd51.pub2.db_link 1 0 236,774 0 70,788 0 0 118,268 6 7,023,115 ctdprd51.pg_catalog.pg_trigger 1 1 316 0 25 0 0 134 31 166,125 ctdprd51.edit.reference_db_link 1 0 5,677 0 1,558 0 0 3,603 1 220,903 ctdprd51.pub2.term_reference 1 0 36,667 0 5 0 0 18,279 2 1,089,004 ctdprd51.pub2.gene_taxon 1 0 140,379 0 5 0 0 70,132 3 4,162,601 ctdprd51.pub1.term_set_enrichment 1 0 8,799 0 4,195 0 0 4,448 2 274,947 ctdprd51.edit.object_note 1 1 175 0 5 0 0 16 3 14,016 ctdprd51.pub2.term_pathway 1 0 3,331 0 4 0 0 1,614 2 106,857 ctdprd51.pub2.exp_receptor_gender 1 0 2,674 0 2 0 0 1 0 281 ctdprd51.pg_catalog.pg_type 1 1 78 0 39 0 0 63 28 107,226 ctdprd51.pub2.exp_study_factor 1 0 113 0 14 0 0 1 1 3,729 ctdprd51.pub2.exp_event_assay_method 1 0 4,805 0 2 0 0 1 0 281 ctdprd51.pub2.exp_receptor 1 0 7,282 0 2 0 0 1 0 281 ctdprd51.pub2.gene_gene 1 0 11,924 0 5 0 0 5,921 2 361,210 ctdprd51.pub2.reference_party_role 1 0 13,304 0 4 0 0 6,625 1 399,294 ctdprd51.pub2.term_comp_agent 1 0 148 0 4 0 0 44 2 14,943 ctdprd51.pub2.exposure 1 0 3,642 0 2 0 0 1 0 281 ctdprd51.pub2.gene_chem_ref_gene_form 1 0 32,013 0 3 0 0 15,958 2 954,141 ctdprd51.edit.db_link 1 0 7,465 0 3 0 0 3,603 1 220,972 ctdprd51.pub2.img 1 0 1,109 0 5 0 0 524 2 42,787 ctdprd51.pub2.exp_event 1 0 12,350 0 3 0 0 1 1 3,937 ctdprd51.edit.study_factor 1 0 56 0 5 0 0 3 2 15,723 ctdprd51.pub1.term_set_enrichment_agent 1 0 408,590 0 178,861 0 0 206,163 8 12,229,415 ctdprd51.pg_catalog.pg_constraint 1 1 256 0 15 0 0 99 13 76,241 ctdprd51.pub2.gene_go_annot 1 0 529,894 0 250,956 0 0 264,836 10 15,702,771 ctdprd51.pub2.exp_receptor_tobacco_use 1 0 1,190 0 2 0 0 1 0 281 ctdprd51.pg_toast.pg_toast_486223 1 0 25 0 0 0 0 1 0 188 ctdprd51.pub2.reference_party 1 0 5,080 0 4 0 0 2,506 2 158,397 ctdprd51.pub2.gene_disease 1 1 2,865,044 0 782,641 0 0 1,594,108 726,302 2,030,353,614 ctdprd51.pub2.exp_event_location 1 0 3,412 0 2 0 0 1 0 281 Total 242 46 28,582,411 197,533 2,412,235 11 31,044 6,058,615 1,643,201 5,381,495,321 Tuples removed per table
Key values
- pub2.gene_disease (32984711) Main table with removed tuples on database ctdprd51
- 60063529 tuples Total removed
Index Tuples Pages Table Vacuums scans removed remain not yet removable removed remain ctdprd51.pub2.gene_disease 1 1 32,984,711 32,984,711 0 0 485,070 ctdprd51.pub2.phenotype_term 2 2 19,809,392 6,594,928 0 0 246,770 ctdprd51.pub2.chem_disease 29 1 3,338,654 190,303,278 93,482,312 0 1,422,392 ctdprd51.pub2.term 35 2 2,096,437 136,165,612 65,015,401 0 3,243,750 ctdprd51.pub2.dag_node 31 1 1,715,888 102,726,825 49,760,752 0 2,512,574 ctdprd51.pub2.ixn 1 1 55,608 2,247,571 0 0 531,037 ctdprd51.pub2.reference 32 2 37,363 12,141,833 5,824,981 0 2,428,894 ctdprd51.pg_toast.pg_toast_2619 3 3 11,711 61,133 0 0 37,776 ctdprd51.pg_catalog.pg_attribute 3 3 2,939 26,151 0 69 601 ctdprd51.pubc.log_query 34 11 2,834 71,608 47,268 0 2,845 ctdprd51.pg_catalog.pg_statistic 5 5 2,401 11,381 102 0 1,450 ctdprd51.pg_catalog.pg_depend 1 1 1,829 13,752 0 0 145 ctdprd51.pg_catalog.pg_description 1 1 1,222 5,265 0 0 89 postgres.pg_catalog.pg_shdepend 2 2 692 3,743 0 0 42 ctdprd51.pg_catalog.pg_trigger 1 1 470 1,797 0 0 50 ctdprd51.pg_catalog.pg_class 3 3 377 5,343 0 0 183 ctdprd51.pg_catalog.pg_index 1 1 235 1,162 0 0 41 ctdprd51.pg_catalog.pg_type 1 1 190 1,155 0 0 35 ctdprd51.pg_catalog.pg_constraint 1 1 154 879 0 0 36 ctdprd51.pub2.db 1 1 130 130 0 0 6 ctdprd51.edit.db_report 1 0 106 158 0 0 4 ctdprd51.pg_toast.pg_toast_6007961 1 1 70 69 0 0 21 ctdprd51.edit.object_note 1 1 61 33 0 1 2 ctdprd51.edit.study_factor 1 0 55 11 0 0 1 ctdprd51.pub2.term_label 1 0 0 6,125,998 0 0 90,087 ctdprd51.pub2.gene_gene_ref_throughput 1 0 0 1,381,732 0 0 7,185 ctdprd51.pub2.gene_gene_reference 1 0 0 1,376,106 0 0 14,985 ctdprd51.pub2.reference_exp 1 0 0 3,460 0 0 125 ctdprd51.pub2.slim_term_mapping 1 0 0 32,796 0 0 261 ctdprd51.pub2.exp_receptor_race 1 0 0 96,038 0 0 623 ctdprd51.pub2.exp_event_project 1 0 0 94,674 0 0 986 ctdprd51.pub2.exp_stressor_stressor_src 1 0 0 284,308 0 0 1,258 ctdprd51.pub2.exp_anatomy 1 0 0 3,857 0 0 33 ctdprd51.pg_toast.pg_toast_6008030 1 0 0 236,278 0 0 43,693 ctdprd51.pub2.exp_outcome 1 0 0 13,528 0 0 231 ctdprd51.pub2.exp_stressor 1 0 0 207,570 0 0 2,976 ctdprd51.pub2.dag_edge 1 0 0 88,931 0 0 481 ctdprd51.pub2.db_link 1 0 0 16,389,809 0 0 118,267 ctdprd51.edit.reference_db_link 1 0 0 323,405 0 0 3,602 ctdprd51.pub2.term_reference 1 0 0 3,381,343 0 0 18,278 ctdprd51.pub2.gene_taxon 1 0 0 11,010,598 0 0 70,131 ctdprd51.pub1.term_set_enrichment 1 0 0 1,405,317 0 0 23,274 ctdprd51.pub2.term_pathway 1 0 0 135,792 0 0 1,613 ctdprd51.pub2.exp_receptor_gender 1 0 0 188,530 0 0 1,321 ctdprd51.pub2.exp_study_factor 1 0 0 1,625 0 0 10 ctdprd51.pub2.exp_event_assay_method 1 0 0 236,341 0 0 2,356 ctdprd51.pub2.exp_receptor 1 0 0 190,968 0 0 3,611 ctdprd51.pub2.gene_gene 1 0 0 1,095,178 0 0 5,920 ctdprd51.pub2.term_set_enrichment 7 0 0 433,639 0 0 7,166 ctdprd51.pub2.reference_party_role 1 0 0 1,225,420 0 0 6,624 ctdprd51.pub2.term_comp_agent 1 0 0 4,475 0 0 43 ctdprd51.pub2.exposure 1 0 0 214,498 0 0 1,766 ctdprd51.pub2.term_set_enrichment_agent 6 0 0 23,791,468 0 0 270,364 ctdprd51.pub2.gene_chem_ref_gene_form 1 0 0 2,945,937 0 0 15,957 ctdprd51.edit.db_link 1 0 0 323,405 0 0 3,602 ctdprd51.pub2.img 1 0 0 50,713 0 0 523 ctdprd51.pub2.exp_event 1 0 0 207,409 0 0 6,094 ctdprd51.pub1.term_set_enrichment_agent 1 0 0 95,962,863 0 0 1,090,488 ctdprd51.pub2.gene_go_annot 1 0 0 41,581,250 0 0 264,835 ctdprd51.pub2.exp_receptor_tobacco_use 1 0 0 79,256 0 0 559 ctdprd51.pg_toast.pg_toast_486223 1 0 0 0 0 0 0 ctdprd51.pub2.reference_party 1 0 0 448,440 0 0 2,505 ctdprd51.pub2.exp_event_location 1 0 0 248,987 0 0 1,653 Total 242 46 60,063,529 695,190,470 214,130,816 70 12,997,300 Pages removed per table
Key values
- pg_catalog.pg_attribute (69) Main table with removed pages on database ctdprd51
- 70 pages Total removed
Table Number of vacuums Index scans Tuples removed Pages removed ctdprd51.pg_catalog.pg_attribute 3 3 2939 69 ctdprd51.edit.object_note 1 1 61 1 ctdprd51.pub2.term_label 1 0 0 0 ctdprd51.pub2.gene_gene_ref_throughput 1 0 0 0 ctdprd51.pub2.db 1 1 130 0 ctdprd51.pub2.ixn 1 1 55608 0 ctdprd51.pub2.gene_gene_reference 1 0 0 0 ctdprd51.pub2.reference_exp 1 0 0 0 ctdprd51.pg_catalog.pg_index 1 1 235 0 ctdprd51.pg_toast.pg_toast_6007961 1 1 70 0 ctdprd51.edit.db_report 1 0 106 0 ctdprd51.pub2.slim_term_mapping 1 0 0 0 ctdprd51.pub2.exp_receptor_race 1 0 0 0 ctdprd51.pub2.exp_event_project 1 0 0 0 ctdprd51.pub2.exp_stressor_stressor_src 1 0 0 0 ctdprd51.pub2.exp_anatomy 1 0 0 0 ctdprd51.pub2.chem_disease 29 1 3338654 0 ctdprd51.pg_toast.pg_toast_6008030 1 0 0 0 ctdprd51.pub2.exp_outcome 1 0 0 0 ctdprd51.pub2.exp_stressor 1 0 0 0 ctdprd51.pub2.dag_edge 1 0 0 0 ctdprd51.pg_catalog.pg_depend 1 1 1829 0 ctdprd51.pg_catalog.pg_description 1 1 1222 0 ctdprd51.pub2.db_link 1 0 0 0 ctdprd51.pg_catalog.pg_trigger 1 1 470 0 ctdprd51.edit.reference_db_link 1 0 0 0 ctdprd51.pub2.reference 32 2 37363 0 ctdprd51.pub2.dag_node 31 1 1715888 0 ctdprd51.pub2.term_reference 1 0 0 0 ctdprd51.pub2.gene_taxon 1 0 0 0 ctdprd51.pub1.term_set_enrichment 1 0 0 0 ctdprd51.pg_toast.pg_toast_2619 3 3 11711 0 ctdprd51.pub2.term_pathway 1 0 0 0 ctdprd51.pub2.exp_receptor_gender 1 0 0 0 ctdprd51.pub2.term 35 2 2096437 0 ctdprd51.pg_catalog.pg_type 1 1 190 0 ctdprd51.pub2.exp_study_factor 1 0 0 0 ctdprd51.pub2.exp_event_assay_method 1 0 0 0 ctdprd51.pub2.exp_receptor 1 0 0 0 ctdprd51.pub2.gene_gene 1 0 0 0 ctdprd51.pub2.term_set_enrichment 7 0 0 0 ctdprd51.pub2.reference_party_role 1 0 0 0 ctdprd51.pub2.term_comp_agent 1 0 0 0 ctdprd51.pub2.exposure 1 0 0 0 ctdprd51.pubc.log_query 34 11 2834 0 ctdprd51.pg_catalog.pg_statistic 5 5 2401 0 ctdprd51.pg_catalog.pg_class 3 3 377 0 ctdprd51.pub2.term_set_enrichment_agent 6 0 0 0 ctdprd51.pub2.gene_chem_ref_gene_form 1 0 0 0 ctdprd51.edit.db_link 1 0 0 0 ctdprd51.pub2.img 1 0 0 0 ctdprd51.pub2.exp_event 1 0 0 0 ctdprd51.edit.study_factor 1 0 55 0 ctdprd51.pub1.term_set_enrichment_agent 1 0 0 0 ctdprd51.pg_catalog.pg_constraint 1 1 154 0 postgres.pg_catalog.pg_shdepend 2 2 692 0 ctdprd51.pub2.gene_go_annot 1 0 0 0 ctdprd51.pub2.exp_receptor_tobacco_use 1 0 0 0 ctdprd51.pub2.phenotype_term 2 2 19809392 0 ctdprd51.pg_toast.pg_toast_486223 1 0 0 0 ctdprd51.pub2.reference_party 1 0 0 0 ctdprd51.pub2.gene_disease 1 1 32984711 0 ctdprd51.pub2.exp_event_location 1 0 0 0 Total 242 46 60,063,529 70 Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs Aug 25 00 0 2 01 0 0 02 0 1 03 0 1 04 0 0 05 0 4 06 0 0 07 0 0 08 0 0 09 0 1 10 0 0 11 0 0 12 0 0 13 0 1 14 0 0 15 0 0 16 0 1 17 0 0 18 0 0 19 0 0 20 0 0 21 0 1 22 0 0 23 0 0 Aug 26 00 0 0 01 0 1 02 0 2 03 0 3 04 0 2 05 0 2 06 0 1 07 0 0 08 0 1 09 0 0 10 0 1 11 0 1 12 0 0 13 0 0 14 0 0 15 0 1 16 0 0 17 0 0 18 0 0 19 0 1 20 0 0 21 0 0 22 0 1 23 0 0 Aug 27 00 0 2 01 0 1 02 0 2 03 0 2 04 0 1 05 0 3 06 0 0 07 0 1 08 0 0 09 0 0 10 0 13 11 0 1 12 0 0 13 0 13 14 0 0 15 0 2 16 0 0 17 0 12 18 0 9 19 0 0 20 0 0 21 0 1 22 0 1 23 0 2 Aug 28 00 0 30 01 0 2 02 0 5 03 0 1 04 0 5 05 0 5 06 0 3 07 0 1 08 0 0 09 0 1 10 0 0 11 0 8 12 0 1 13 0 0 14 0 0 15 0 0 16 0 3 17 0 1 18 0 0 19 0 0 20 0 1 21 0 0 22 0 0 23 0 1 Aug 29 00 0 0 01 0 2 02 0 2 03 0 1 04 0 1 05 0 4 06 0 0 07 0 1 08 0 1 09 0 1 10 0 0 11 0 0 12 0 1 13 0 0 14 0 1 15 0 2 16 0 0 17 0 0 18 0 1 19 0 0 20 0 2 21 0 2 22 0 1 23 0 3 Aug 30 00 0 3 01 0 3 02 0 3 03 0 2 04 0 1 05 0 2 06 0 0 07 0 1 08 0 2 09 0 1 10 0 0 11 0 1 12 0 1 13 0 1 14 0 0 15 0 0 16 0 0 17 0 1 18 0 0 19 0 0 20 0 0 21 0 0 22 0 1 23 0 0 Aug 31 00 0 2 01 0 1 02 0 1 03 0 2 04 0 1 05 0 4 06 0 0 07 0 1 08 0 1 09 0 1 10 0 0 11 0 0 12 0 2 13 0 1 14 0 2 15 0 2 16 0 1 17 0 1 18 0 1 19 0 0 20 0 1 21 0 0 22 0 0 23 0 1 - 386.55 sec Highest CPU-cost vacuum
-
Locks
Locks by types
Key values
- unknown Main Lock Type
- 0 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query NO DATASET
Queries that waited the most
Rank Wait time Query NO DATASET
-
Queries
Queries by type
Key values
- 3,709 Total read queries
- 442 Total write queries
Queries by database
Key values
- unknown Main database
- 2,500 Requests
- 17h7m8s (unknown)
- Main time consuming database
Database Request type Count Duration ctdprd51 Total 1,678 3h23m35s copy to 49 19m19s cte 25 1m16s ddl 1 5s48ms insert 3 12m15s others 1 2s471ms select 1,598 2h50m34s tcl 1 1s452ms postgres Total 2 2s790ms select 2 2s790ms unknown Total 2,500 17h7m8s copy to 259 1h48m40s cte 16 17s71ms ddl 52 38m25s insert 27 42m41s others 28 52m7s select 2,109 12h28m15s update 9 36m40s Queries by user
Key values
- unknown Main user
- 5,305 Requests
User Request type Count Duration edit Total 5 29s486ms insert 2 22s70ms select 3 7s416ms editeu Total 24 1m11s select 24 1m11s load Total 68 46m1s others 2 4s942ms select 66 45m56s postgres Total 108 42m22s copy to 108 42m22s pub1 Total 2 2s584ms select 2 2s584ms pub2 Total 18 24m37s ddl 2 10s97ms insert 3 23m48s select 11 35s991ms tcl 2 2s905ms pubeu Total 3,329 3h43m57s cte 42 2m7s select 3,287 3h41m49s qaeu Total 118 1h29m24s cte 19 1m4s select 99 1h28m19s unknown Total 5,305 1d8h26m22s copy to 696 6h34m26s cte 37 39s985ms ddl 96 1h15m20s insert 38 1h20m4s others 42 1h41m30s select 4,387 20h57m40s update 9 36m40s zbx_monitor Total 5 6s327ms select 5 6s327ms Duration by user
Key values
- 1d8h26m22s (unknown) Main time consuming user
User Request type Count Duration edit Total 5 29s486ms insert 2 22s70ms select 3 7s416ms editeu Total 24 1m11s select 24 1m11s load Total 68 46m1s others 2 4s942ms select 66 45m56s postgres Total 108 42m22s copy to 108 42m22s pub1 Total 2 2s584ms select 2 2s584ms pub2 Total 18 24m37s ddl 2 10s97ms insert 3 23m48s select 11 35s991ms tcl 2 2s905ms pubeu Total 3,329 3h43m57s cte 42 2m7s select 3,287 3h41m49s qaeu Total 118 1h29m24s cte 19 1m4s select 99 1h28m19s unknown Total 5,305 1d8h26m22s copy to 696 6h34m26s cte 37 39s985ms ddl 96 1h15m20s insert 38 1h20m4s others 42 1h41m30s select 4,387 20h57m40s update 9 36m40s zbx_monitor Total 5 6s327ms select 5 6s327ms Queries by host
Key values
- unknown Main host
- 8,982 Requests
- 1d15h34m35s (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 4,098 Requests
- 19h57m17s (unknown)
- Main time consuming application
Application Request type Count Duration pgAdmin 4 - CONN:472802 Total 1 1s333ms select 1 1s333ms pgAdmin 4 - CONN:503319 Total 1 1s452ms tcl 1 1s452ms pgAdmin 4 - CONN:7735424 Total 2 13s507ms insert 1 11s35ms select 1 2s472ms pg_bulkload Total 23 13m37s select 23 13m37s pg_dump Total 49 19m19s copy to 49 19m19s psql Total 6 15s769ms ddl 1 5s48ms select 5 10s720ms unknown Total 4,098 19h57m17s copy to 259 1h48m40s cte 41 1m33s ddl 52 38m25s insert 29 54m45s others 29 52m10s select 3,679 15h5m update 9 36m40s Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2024-08-26 01:27:56 Date
Number of cancelled queries (5 minutes period)
NO DATASET
-
Top Queries
Histogram of query times
Key values
- 3,656 1000-10000ms duration
Slowest individual queries
Rank Duration Query 1 1h57m12s select pub2.maint_term_derive_data ();[ Date: 2024-08-28 06:12:01 - Bind query: yes ]
2 1h37m39s select pub2.maint_gene_chem_ref_gene_form_refresh ();[ Date: 2024-08-28 02:18:43 - Bind query: yes ]
3 1h1m8s SELECT maint_term_derive_nm_fts ();[ Date: 2024-08-28 03:22:45 - Bind query: yes ]
4 46m7s VACUUM FULL ANALYZE;[ Date: 2024-08-28 04:14:26 - Bind query: yes ]
5 40m23s select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.GENE_GO_ANNOT gga, pub2.PHENOTYPE_TERM_REFERENCE ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');[ Date: 2024-08-27 21:01:24 - Bind query: yes ]
6 38m23s select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');[ Date: 2024-08-27 20:20:55 - Bind query: yes ]
7 34m36s SELECT i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) FROM edit.IXN i, edit.REFERENCE_IXN r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in ('bogusName') order by i.id asc;[ Date: 2024-08-27 18:50:45 - Bind query: yes ]
8 33m21s select pub2.maint_cached_value_refresh_data_metrics ();[ Date: 2024-08-28 06:55:18 - Bind query: yes ]
9 33m4s SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;[ Date: 2024-08-28 12:02:04 - Database: ctdprd51 - User: qaeu - Bind query: yes ]
10 28m17s update pub2.GENE_DISEASE gd set exposure_reference_qty = ( select count(distinct reference_id) from pub2.GENE_DISEASE_REFERENCE gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub2.REFERENCE r where has_exposures = true));[ Date: 2024-08-28 00:35:37 - Bind query: yes ]
11 24m14s insert into pub2.GENE_GO_ANNOT (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.GENE_GO_ANNOT;[ Date: 2024-08-27 18:07:45 - Bind query: yes ]
12 23m59s COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2024-08-31 19:43:54 ]
13 23m53s COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2024-08-31 19:00:54 ]
14 17m15s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-08-30 00:17:17 ]
15 16m44s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-08-28 00:16:45 ]
16 16m36s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-08-27 00:16:37 ]
17 16m32s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-08-31 00:16:34 ]
18 16m30s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-08-29 00:16:32 ]
19 16m29s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-08-26 00:16:31 ]
20 16m28s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-08-25 00:16:30 ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 1h57m12s 1 1h57m12s 1h57m12s 1h57m12s select pub2.maint_term_derive_data ();Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Aug 28 06 1 1h57m12s 1h57m12s -
select pub2.maint_term_derive_data ();
Date: 2024-08-28 06:12:01 Duration: 1h57m12s Bind query: yes
2 1h56m37s 7 16m28s 17m15s 16m39s select maint_query_logs_archive ();Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Aug 25 00 1 16m28s 16m28s Aug 26 00 1 16m29s 16m29s Aug 27 00 1 16m36s 16m36s Aug 28 00 1 16m44s 16m44s Aug 29 00 1 16m30s 16m30s Aug 30 00 1 17m15s 17m15s Aug 31 00 1 16m32s 16m32s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-08-30 00:17:17 Duration: 17m15s
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-08-28 00:16:45 Duration: 16m44s
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-08-27 00:16:37 Duration: 16m36s
3 1h41m18s 581 1s964ms 24s744ms 10s462ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Aug 27 06 2 4s113ms 2s56ms Aug 29 22 39 6m25s 9s878ms 23 365 1h4m54s 10s670ms Aug 30 00 166 28m37s 10s345ms 01 9 1m17s 8s599ms [ User: pubeu - Total duration: 35m27s - Times executed: 198 ]
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SELECT /* BatchChemGODAO */ 'd000638' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1337831)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-08-29 23:34:14 Duration: 24s744ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'd000638' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1337831)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-08-30 00:00:49 Duration: 24s186ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'd000638' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1337831)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-08-29 23:34:10 Duration: 23s148ms Bind query: yes
4 1h37m39s 1 1h37m39s 1h37m39s 1h37m39s select pub2.maint_gene_chem_ref_gene_form_refresh ();Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Aug 28 02 1 1h37m39s 1h37m39s -
select pub2.maint_gene_chem_ref_gene_form_refresh ();
Date: 2024-08-28 02:18:43 Duration: 1h37m39s Bind query: yes
5 1h1m8s 1 1h1m8s 1h1m8s 1h1m8s select maint_term_derive_nm_fts ();Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Aug 28 03 1 1h1m8s 1h1m8s -
SELECT maint_term_derive_nm_fts ();
Date: 2024-08-28 03:22:45 Duration: 1h1m8s Bind query: yes
6 49m7s 222 3s532ms 33m4s 13s276ms select g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(r.acc_txt, ? order by r.acc_txt) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id group by g.nm, g.acc_txt, d.nm, d.acc_db_cd || ? || d.acc_txt, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by g.nm, d.nm;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Aug 28 12 222 49m7s 13s276ms [ User: qaeu - Total duration: 33m4s - Times executed: 1 ]
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-08-28 12:02:04 Duration: 33m4s Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-08-28 12:26:45 Duration: 5s645ms Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-08-28 12:20:35 Duration: 5s628ms Bind query: yes
7 46m7s 1 0ms 46m7s 46m7s vacuum full analyze;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Aug 28 04 1 46m7s 46m7s -
VACUUM FULL ANALYZE;
Date: 2024-08-28 04:14:26 Duration: 46m7s Bind query: yes
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VACUUM FULL ANALYZE;
Date: 2024-08-28 03:28:19 Duration: 0ms
8 44m52s 72 1s326ms 6m30s 37s402ms select * from pgbulkload.pg_bulkload (?);Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Aug 27 13 12 1m26s 7s198ms 14 27 20m19s 45s150ms 18 6 1m6s 11s139ms 21 6 14m23s 2m23s 22 14 3m55s 16s831ms 23 4 3m18s 49s634ms Aug 28 00 3 22s763ms 7s587ms [ User: load - Total duration: 13m37s - Times executed: 23 ]
[ Application: pg_bulkload - Total duration: 13m37s - Times executed: 23 ]
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.GENE_DISEASE_REFERENCE,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.log,parse-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.DUPE}');
Date: 2024-08-27 21:12:36 Duration: 6m30s Database: ctdprd51 User: load Application: pg_bulkload Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.DAG_PATH,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.log,parse-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.DUPE}');
Date: 2024-08-27 21:39:50 Duration: 5m4s Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=edit.DB_LINK,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.log,parse-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.DUPE}');
Date: 2024-08-27 14:11:03 Duration: 3m51s Bind query: yes
9 40m23s 1 40m23s 40m23s 40m23s select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.gene_go_annot gga, pub2.phenotype_term_reference ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Aug 27 21 1 40m23s 40m23s -
select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.GENE_GO_ANNOT gga, pub2.PHENOTYPE_TERM_REFERENCE ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');
Date: 2024-08-27 21:01:24 Duration: 40m23s Bind query: yes
10 38m23s 1 38m23s 38m23s 38m23s select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.object_type where cd = ?), ptr.term_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.phenotype_term_reference ptr, pub2.phenotype_term_reference ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Aug 27 20 1 38m23s 38m23s -
select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');
Date: 2024-08-27 20:20:55 Duration: 38m23s Bind query: yes
11 34m36s 1 34m36s 34m36s 34m36s select i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) from edit.ixn i, edit.reference_ixn r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in (...) order by i.id asc;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Aug 27 18 1 34m36s 34m36s -
SELECT i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) FROM edit.IXN i, edit.REFERENCE_IXN r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in ('bogusName') order by i.id asc;
Date: 2024-08-27 18:50:45 Duration: 34m36s Bind query: yes
12 33m21s 1 33m21s 33m21s 33m21s select pub2.maint_cached_value_refresh_data_metrics ();Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Aug 28 06 1 33m21s 33m21s -
select pub2.maint_cached_value_refresh_data_metrics ();
Date: 2024-08-28 06:55:18 Duration: 33m21s Bind query: yes
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select pub2.maint_cached_value_refresh_data_metrics ();
Date: 2024-08-28 06:51:05 Duration: 0ms
13 32m16s 479 3s688ms 16s231ms 4s43ms select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Aug 25 03 8 31s108ms 3s888ms 04 2 7s612ms 3s806ms 05 1 3s994ms 3s994ms 09 3 11s664ms 3s888ms 11 1 3s965ms 3s965ms 12 1 3s935ms 3s935ms 13 1 3s813ms 3s813ms 15 1 4s68ms 4s68ms 16 2 7s832ms 3s916ms 17 1 3s807ms 3s807ms 18 11 44s438ms 4s39ms 19 3 11s820ms 3s940ms 20 1 3s767ms 3s767ms 21 1 3s806ms 3s806ms 22 2 7s881ms 3s940ms Aug 26 00 2 7s819ms 3s909ms 01 6 23s281ms 3s880ms 02 2 7s934ms 3s967ms 03 18 1m10s 3s933ms 04 31 2m 3s883ms 05 8 32s380ms 4s47ms 06 1 3s877ms 3s877ms 08 4 15s680ms 3s920ms 09 3 12s47ms 4s15ms 10 1 3s856ms 3s856ms 11 18 1m10s 3s931ms 12 3 23s867ms 7s955ms 13 2 7s643ms 3s821ms 16 1 3s919ms 3s919ms 17 1 3s925ms 3s925ms 18 3 11s761ms 3s920ms 21 19 1m15s 3s949ms 22 11 43s348ms 3s940ms 23 4 15s637ms 3s909ms Aug 27 01 1 3s796ms 3s796ms 02 1 3s799ms 3s799ms 03 5 19s586ms 3s917ms 04 12 46s866ms 3s905ms 05 3 11s980ms 3s993ms 06 1 3s788ms 3s788ms 07 2 8s451ms 4s225ms 08 1 3s991ms 3s991ms 09 2 7s803ms 3s901ms 10 4 15s608ms 3s902ms 11 1 3s814ms 3s814ms 13 2 7s633ms 3s816ms 14 7 28s882ms 4s126ms 15 11 43s234ms 3s930ms 16 1 4s55ms 4s55ms 17 1 4s20ms 4s20ms 18 2 7s758ms 3s879ms 20 1 3s867ms 3s867ms 21 5 19s528ms 3s905ms 22 3 11s735ms 3s911ms Aug 28 00 2 7s825ms 3s912ms 01 11 42s310ms 3s846ms 02 12 48s256ms 4s21ms 03 5 20s410ms 4s82ms 04 5 20s971ms 4s194ms 05 8 31s569ms 3s946ms 06 2 7s817ms 3s908ms 07 1 3s892ms 3s892ms 08 6 23s933ms 3s988ms 09 13 1m16s 5s909ms 10 5 20s61ms 4s12ms 11 3 11s877ms 3s959ms 13 1 3s929ms 3s929ms 14 1 3s918ms 3s918ms 15 5 19s434ms 3s886ms 17 2 7s797ms 3s898ms 18 1 3s954ms 3s954ms 20 3 12s376ms 4s125ms 21 1 4s183ms 4s183ms 23 2 7s691ms 3s845ms Aug 29 00 3 13s274ms 4s424ms 01 2 7s854ms 3s927ms 02 3 11s352ms 3s784ms 03 2 7s690ms 3s845ms 04 4 15s330ms 3s832ms 05 1 3s985ms 3s985ms 06 1 3s767ms 3s767ms 07 1 3s995ms 3s995ms 09 1 3s833ms 3s833ms 10 1 3s812ms 3s812ms 12 3 11s675ms 3s891ms 14 4 15s830ms 3s957ms 16 1 4s107ms 4s107ms 18 4 15s844ms 3s961ms 19 17 1m7s 3s992ms 20 5 20s61ms 4s12ms Aug 30 03 5 20s279ms 4s55ms 04 7 27s558ms 3s936ms 05 6 23s929ms 3s988ms 06 6 23s700ms 3s950ms 07 5 19s792ms 3s958ms 08 3 12s48ms 4s16ms 09 2 8s306ms 4s153ms 10 1 4s218ms 4s218ms 11 1 3s916ms 3s916ms 12 2 8s7ms 4s3ms 13 2 8s38ms 4s19ms 20 2 7s820ms 3s910ms 23 2 7s916ms 3s958ms Aug 31 00 1 4s158ms 4s158ms 01 1 4s142ms 4s142ms 02 2 8s82ms 4s41ms 03 22 1m26s 3s940ms 04 2 8s976ms 4s488ms 05 1 3s963ms 3s963ms 07 5 20s446ms 4s89ms 08 3 11s874ms 3s958ms 11 1 3s963ms 3s963ms 14 2 7s990ms 3s995ms 15 6 27s440ms 4s573ms 16 1 4s317ms 4s317ms 20 2 8s381ms 4s190ms 23 1 3s964ms 3s964ms [ User: pubeu - Total duration: 15m57s - Times executed: 238 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1391044') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1391044') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-08-26 12:06:28 Duration: 16s231ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1391044') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1391044') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-08-28 09:43:59 Duration: 15s821ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1430698') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1430698') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-08-28 09:50:23 Duration: 14s27ms Bind query: yes
14 28m17s 1 28m17s 28m17s 28m17s update pub2.gene_disease gd set exposure_reference_qty = ( select count(distinct reference_id) from pub2.gene_disease_reference gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub2.reference r where has_exposures = true));Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Aug 28 00 1 28m17s 28m17s -
update pub2.GENE_DISEASE gd set exposure_reference_qty = ( select count(distinct reference_id) from pub2.GENE_DISEASE_REFERENCE gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub2.REFERENCE r where has_exposures = true));
Date: 2024-08-28 00:35:37 Duration: 28m17s Bind query: yes
15 24m14s 1 24m14s 24m14s 24m14s insert into pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.gene_go_annot;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Aug 27 18 1 24m14s 24m14s -
insert into pub2.GENE_GO_ANNOT (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.GENE_GO_ANNOT;
Date: 2024-08-27 18:07:45 Duration: 24m14s Bind query: yes
16 23m59s 1 23m59s 23m59s 23m59s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Aug 31 19 1 23m59s 23m59s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-08-31 19:43:54 Duration: 23m59s
17 23m53s 1 23m53s 23m53s 23m53s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Aug 31 19 1 23m53s 23m53s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-08-31 19:00:54 Duration: 23m53s
18 16m14s 14 1s433ms 3m23s 1m9s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Aug 25 04 1 1s581ms 1s581ms Aug 26 16 1 3m23s 3m23s Aug 27 00 1 1s433ms 1s433ms Aug 28 00 1 16s500ms 16s500ms 12 1 3m11s 3m11s 14 1 2s155ms 2s155ms 19 1 1s525ms 1s525ms 23 1 2m3s 2m3s Aug 29 02 1 2m59s 2m59s Aug 30 00 1 46s163ms 46s163ms 05 1 1m40s 1m40s 08 1 1m43s 1m43s 16 1 1s605ms 1s605ms Aug 31 05 1 1s549ms 1s549ms [ User: pubeu - Total duration: 7m26s - Times executed: 6 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1244203') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-08-26 16:55:49 Duration: 3m23s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1209780') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-08-28 12:11:02 Duration: 3m11s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1232638') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-08-29 02:01:02 Duration: 2m59s Bind query: yes
19 14m5s 25 33s625ms 34s595ms 33s806ms copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Aug 25 06 1 33s659ms 33s659ms 10 1 33s755ms 33s755ms 14 1 33s992ms 33s992ms 18 1 33s703ms 33s703ms Aug 26 06 1 33s747ms 33s747ms 10 1 33s868ms 33s868ms 14 1 33s678ms 33s678ms 18 1 33s810ms 33s810ms Aug 27 06 1 33s797ms 33s797ms 10 1 33s625ms 33s625ms 14 1 33s772ms 33s772ms 18 1 33s831ms 33s831ms Aug 28 06 1 33s802ms 33s802ms 10 1 33s699ms 33s699ms 14 1 33s748ms 33s748ms 18 1 33s740ms 33s740ms Aug 29 06 1 33s867ms 33s867ms 10 1 33s696ms 33s696ms 14 1 33s820ms 33s820ms 18 1 33s740ms 33s740ms Aug 30 06 1 33s979ms 33s979ms 10 1 33s716ms 33s716ms 14 1 33s810ms 33s810ms 18 1 33s709ms 33s709ms Aug 31 19 1 34s595ms 34s595ms [ User: postgres - Total duration: 13m30s - Times executed: 24 ]
[ Application: pg_dump - Total duration: 13m30s - Times executed: 24 ]
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-08-31 19:57:19 Duration: 34s595ms
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-08-25 14:05:35 Duration: 33s992ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-08-30 06:05:35 Duration: 33s979ms Database: ctdprd51 User: postgres Application: pg_dump
20 12m26s 1 12m26s 12m26s 12m26s alter table pub2.term_enrichment_agent add constraint term_enr_agent_term_enr_fk foreign key (term_id, enriched_term_id) references term_enrichment (term_id, enriched_term_id);Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Aug 27 23 1 12m26s 12m26s -
ALTER TABLE pub2.term_enrichment_agent ADD CONSTRAINT term_enr_agent_term_enr_fk FOREIGN KEY (term_id, enriched_term_id) REFERENCES term_enrichment (term_id, enriched_term_id);
Date: 2024-08-27 23:42:31 Duration: 12m26s Bind query: yes
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 593 11m45s 1s88ms 2s20ms 1s189ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where exposuremarkerterm.id = ? or receptorterm.id = ? group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Aug 25 00 5 5s911ms 1s182ms 01 9 10s627ms 1s180ms 02 3 3s587ms 1s195ms 03 2 2s369ms 1s184ms 04 2 2s365ms 1s182ms 05 4 5s18ms 1s254ms 08 1 1s209ms 1s209ms 09 3 3s560ms 1s186ms 10 1 1s225ms 1s225ms 11 2 2s397ms 1s198ms 12 3 3s589ms 1s196ms 13 4 4s864ms 1s216ms 14 7 8s426ms 1s203ms 15 2 2s377ms 1s188ms 16 4 4s531ms 1s132ms 17 2 2s248ms 1s124ms 18 2 2s394ms 1s197ms 19 3 3s618ms 1s206ms 20 3 3s569ms 1s189ms 21 3 3s572ms 1s190ms 22 1 1s209ms 1s209ms 23 2 2s430ms 1s215ms Aug 26 00 3 3s516ms 1s172ms 01 3 3s613ms 1s204ms 02 5 5s931ms 1s186ms 03 4 4s666ms 1s166ms 04 1 1s201ms 1s201ms 05 7 8s416ms 1s202ms 06 1 1s265ms 1s265ms 07 4 4s810ms 1s202ms 08 3 3s515ms 1s171ms 09 2 2s428ms 1s214ms 10 2 2s426ms 1s213ms 11 4 4s698ms 1s174ms 12 1 1s141ms 1s141ms 13 2 2s294ms 1s147ms 14 3 3s610ms 1s203ms 15 3 3s523ms 1s174ms 16 1 1s191ms 1s191ms 17 5 5s991ms 1s198ms 18 3 3s499ms 1s166ms 19 3 3s613ms 1s204ms 20 3 3s572ms 1s190ms 21 1 1s216ms 1s216ms 22 6 7s111ms 1s185ms 23 2 2s418ms 1s209ms Aug 27 00 3 3s586ms 1s195ms 01 5 5s985ms 1s197ms 02 3 3s628ms 1s209ms 03 3 3s546ms 1s182ms 04 2 2s288ms 1s144ms 05 5 6s102ms 1s220ms 06 3 3s553ms 1s184ms 07 6 7s128ms 1s188ms 08 3 3s500ms 1s166ms 09 4 4s738ms 1s184ms 10 4 4s669ms 1s167ms 11 4 4s718ms 1s179ms 12 1 1s129ms 1s129ms 14 4 4s810ms 1s202ms 15 6 7s129ms 1s188ms 16 7 8s372ms 1s196ms 17 2 2s324ms 1s162ms 18 4 4s729ms 1s182ms 19 4 4s633ms 1s158ms 20 3 3s433ms 1s144ms 21 4 4s691ms 1s172ms 22 2 2s299ms 1s149ms 23 2 2s247ms 1s123ms Aug 28 00 4 4s509ms 1s127ms 01 3 3s473ms 1s157ms 02 2 2s319ms 1s159ms 03 2 2s392ms 1s196ms 04 3 3s532ms 1s177ms 05 8 9s520ms 1s190ms 06 2 2s299ms 1s149ms 07 5 5s780ms 1s156ms 08 6 7s129ms 1s188ms 09 6 7s238ms 1s206ms 10 1 1s204ms 1s204ms 11 2 2s500ms 1s250ms 12 5 5s741ms 1s148ms 13 1 1s130ms 1s130ms 14 2 2s339ms 1s169ms 15 5 6s28ms 1s205ms 16 6 7s198ms 1s199ms 17 2 2s359ms 1s179ms 18 4 4s745ms 1s186ms 19 4 4s781ms 1s195ms 20 1 1s210ms 1s210ms 21 3 3s556ms 1s185ms 22 1 1s214ms 1s214ms 23 5 5s866ms 1s173ms Aug 29 00 3 3s527ms 1s175ms 01 2 2s405ms 1s202ms 02 2 2s385ms 1s192ms 03 2 2s378ms 1s189ms 04 5 5s915ms 1s183ms 05 10 11s984ms 1s198ms 06 2 2s325ms 1s162ms 07 3 3s552ms 1s184ms 08 3 3s447ms 1s149ms 09 1 1s209ms 1s209ms 10 3 3s583ms 1s194ms 11 7 8s355ms 1s193ms 12 3 3s638ms 1s212ms 13 4 4s733ms 1s183ms 14 4 4s773ms 1s193ms 15 3 3s555ms 1s185ms 16 2 2s382ms 1s191ms 17 4 4s750ms 1s187ms 18 2 2s402ms 1s201ms 19 6 7s173ms 1s195ms 20 7 8s264ms 1s180ms 21 2 2s453ms 1s226ms 22 1 2s20ms 2s20ms 23 9 10s926ms 1s214ms Aug 30 00 4 4s663ms 1s165ms 01 3 3s509ms 1s169ms 02 5 5s850ms 1s170ms 03 1 1s129ms 1s129ms 04 6 7s42ms 1s173ms 05 7 8s329ms 1s189ms 07 4 4s749ms 1s187ms 08 3 3s499ms 1s166ms 09 1 1s187ms 1s187ms 10 2 2s434ms 1s217ms 11 5 5s910ms 1s182ms 12 3 3s542ms 1s180ms 13 5 5s987ms 1s197ms 14 3 3s619ms 1s206ms 15 5 5s774ms 1s154ms 16 2 2s364ms 1s182ms 17 7 8s328ms 1s189ms 18 7 8s400ms 1s200ms 19 5 5s984ms 1s196ms 20 4 4s827ms 1s206ms 21 4 4s775ms 1s193ms 22 6 7s229ms 1s204ms 23 8 9s440ms 1s180ms Aug 31 00 7 8s304ms 1s186ms 01 3 3s618ms 1s206ms 02 10 11s819ms 1s181ms 03 1 1s170ms 1s170ms 04 5 5s855ms 1s171ms 05 7 8s398ms 1s199ms 06 4 4s707ms 1s176ms 07 3 3s528ms 1s176ms 08 2 2s382ms 1s191ms 09 10 11s977ms 1s197ms 10 9 10s611ms 1s179ms 11 3 3s625ms 1s208ms 12 5 6s18ms 1s203ms 13 5 6s143ms 1s228ms 14 2 2s340ms 1s170ms 16 2 2s512ms 1s256ms 17 5 5s977ms 1s195ms 18 5 6s45ms 1s209ms 19 3 3s585ms 1s195ms 20 2 2s279ms 1s139ms 21 1 1s88ms 1s88ms 23 2 2s336ms 1s168ms [ User: pubeu - Total duration: 6m47s - Times executed: 342 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1437600' or receptorTerm.id = '1437600' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-08-29 22:55:09 Duration: 2s20ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '2038501' or receptorTerm.id = '2038501' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-08-31 13:44:54 Duration: 1s454ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1534065' or receptorTerm.id = '1534065' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-08-31 16:09:13 Duration: 1s369ms Database: ctdprd51 User: pubeu Bind query: yes
2 581 1h41m18s 1s964ms 24s744ms 10s462ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Aug 27 06 2 4s113ms 2s56ms Aug 29 22 39 6m25s 9s878ms 23 365 1h4m54s 10s670ms Aug 30 00 166 28m37s 10s345ms 01 9 1m17s 8s599ms [ User: pubeu - Total duration: 35m27s - Times executed: 198 ]
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SELECT /* BatchChemGODAO */ 'd000638' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1337831)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-08-29 23:34:14 Duration: 24s744ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'd000638' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1337831)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-08-30 00:00:49 Duration: 24s186ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'd000638' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1337831)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-08-29 23:34:10 Duration: 23s148ms Bind query: yes
3 479 32m16s 3s688ms 16s231ms 4s43ms select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Aug 25 03 8 31s108ms 3s888ms 04 2 7s612ms 3s806ms 05 1 3s994ms 3s994ms 09 3 11s664ms 3s888ms 11 1 3s965ms 3s965ms 12 1 3s935ms 3s935ms 13 1 3s813ms 3s813ms 15 1 4s68ms 4s68ms 16 2 7s832ms 3s916ms 17 1 3s807ms 3s807ms 18 11 44s438ms 4s39ms 19 3 11s820ms 3s940ms 20 1 3s767ms 3s767ms 21 1 3s806ms 3s806ms 22 2 7s881ms 3s940ms Aug 26 00 2 7s819ms 3s909ms 01 6 23s281ms 3s880ms 02 2 7s934ms 3s967ms 03 18 1m10s 3s933ms 04 31 2m 3s883ms 05 8 32s380ms 4s47ms 06 1 3s877ms 3s877ms 08 4 15s680ms 3s920ms 09 3 12s47ms 4s15ms 10 1 3s856ms 3s856ms 11 18 1m10s 3s931ms 12 3 23s867ms 7s955ms 13 2 7s643ms 3s821ms 16 1 3s919ms 3s919ms 17 1 3s925ms 3s925ms 18 3 11s761ms 3s920ms 21 19 1m15s 3s949ms 22 11 43s348ms 3s940ms 23 4 15s637ms 3s909ms Aug 27 01 1 3s796ms 3s796ms 02 1 3s799ms 3s799ms 03 5 19s586ms 3s917ms 04 12 46s866ms 3s905ms 05 3 11s980ms 3s993ms 06 1 3s788ms 3s788ms 07 2 8s451ms 4s225ms 08 1 3s991ms 3s991ms 09 2 7s803ms 3s901ms 10 4 15s608ms 3s902ms 11 1 3s814ms 3s814ms 13 2 7s633ms 3s816ms 14 7 28s882ms 4s126ms 15 11 43s234ms 3s930ms 16 1 4s55ms 4s55ms 17 1 4s20ms 4s20ms 18 2 7s758ms 3s879ms 20 1 3s867ms 3s867ms 21 5 19s528ms 3s905ms 22 3 11s735ms 3s911ms Aug 28 00 2 7s825ms 3s912ms 01 11 42s310ms 3s846ms 02 12 48s256ms 4s21ms 03 5 20s410ms 4s82ms 04 5 20s971ms 4s194ms 05 8 31s569ms 3s946ms 06 2 7s817ms 3s908ms 07 1 3s892ms 3s892ms 08 6 23s933ms 3s988ms 09 13 1m16s 5s909ms 10 5 20s61ms 4s12ms 11 3 11s877ms 3s959ms 13 1 3s929ms 3s929ms 14 1 3s918ms 3s918ms 15 5 19s434ms 3s886ms 17 2 7s797ms 3s898ms 18 1 3s954ms 3s954ms 20 3 12s376ms 4s125ms 21 1 4s183ms 4s183ms 23 2 7s691ms 3s845ms Aug 29 00 3 13s274ms 4s424ms 01 2 7s854ms 3s927ms 02 3 11s352ms 3s784ms 03 2 7s690ms 3s845ms 04 4 15s330ms 3s832ms 05 1 3s985ms 3s985ms 06 1 3s767ms 3s767ms 07 1 3s995ms 3s995ms 09 1 3s833ms 3s833ms 10 1 3s812ms 3s812ms 12 3 11s675ms 3s891ms 14 4 15s830ms 3s957ms 16 1 4s107ms 4s107ms 18 4 15s844ms 3s961ms 19 17 1m7s 3s992ms 20 5 20s61ms 4s12ms Aug 30 03 5 20s279ms 4s55ms 04 7 27s558ms 3s936ms 05 6 23s929ms 3s988ms 06 6 23s700ms 3s950ms 07 5 19s792ms 3s958ms 08 3 12s48ms 4s16ms 09 2 8s306ms 4s153ms 10 1 4s218ms 4s218ms 11 1 3s916ms 3s916ms 12 2 8s7ms 4s3ms 13 2 8s38ms 4s19ms 20 2 7s820ms 3s910ms 23 2 7s916ms 3s958ms Aug 31 00 1 4s158ms 4s158ms 01 1 4s142ms 4s142ms 02 2 8s82ms 4s41ms 03 22 1m26s 3s940ms 04 2 8s976ms 4s488ms 05 1 3s963ms 3s963ms 07 5 20s446ms 4s89ms 08 3 11s874ms 3s958ms 11 1 3s963ms 3s963ms 14 2 7s990ms 3s995ms 15 6 27s440ms 4s573ms 16 1 4s317ms 4s317ms 20 2 8s381ms 4s190ms 23 1 3s964ms 3s964ms [ User: pubeu - Total duration: 15m57s - Times executed: 238 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1391044') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1391044') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-08-26 12:06:28 Duration: 16s231ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1391044') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1391044') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-08-28 09:43:59 Duration: 15s821ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1430698') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1430698') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-08-28 09:50:23 Duration: 14s27ms Bind query: yes
4 222 49m7s 3s532ms 33m4s 13s276ms select g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(r.acc_txt, ? order by r.acc_txt) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id group by g.nm, g.acc_txt, d.nm, d.acc_db_cd || ? || d.acc_txt, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by g.nm, d.nm;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Aug 28 12 222 49m7s 13s276ms [ User: qaeu - Total duration: 33m4s - Times executed: 1 ]
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-08-28 12:02:04 Duration: 33m4s Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-08-28 12:26:45 Duration: 5s645ms Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-08-28 12:20:35 Duration: 5s628ms Bind query: yes
5 149 3m21s 1s205ms 8s 1s353ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or receptorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Aug 25 00 1 1s214ms 1s214ms 01 1 1s272ms 1s272ms 04 2 2s612ms 1s306ms 05 2 2s724ms 1s362ms 06 4 5s126ms 1s281ms 08 1 1s338ms 1s338ms 09 1 1s301ms 1s301ms 10 1 1s303ms 1s303ms 12 2 2s530ms 1s265ms 14 2 2s471ms 1s235ms 19 1 1s538ms 1s538ms 20 1 1s319ms 1s319ms 21 1 1s292ms 1s292ms 22 1 1s343ms 1s343ms 23 2 2s520ms 1s260ms Aug 26 00 1 1s238ms 1s238ms 02 1 1s293ms 1s293ms 03 1 1s320ms 1s320ms 04 1 1s287ms 1s287ms 05 3 4s38ms 1s346ms 06 2 2s641ms 1s320ms 10 1 1s304ms 1s304ms 11 1 1s249ms 1s249ms 12 2 2s699ms 1s349ms 13 1 1s359ms 1s359ms 15 1 1s571ms 1s571ms 16 1 1s363ms 1s363ms 21 1 1s230ms 1s230ms 23 1 1s297ms 1s297ms Aug 27 00 1 1s303ms 1s303ms 02 2 2s614ms 1s307ms 05 3 4s70ms 1s356ms 06 1 1s333ms 1s333ms 07 1 1s294ms 1s294ms 10 1 1s276ms 1s276ms 15 1 1s252ms 1s252ms 16 2 2s618ms 1s309ms 17 2 2s601ms 1s300ms 19 1 1s230ms 1s230ms 20 1 1s243ms 1s243ms 21 3 3s891ms 1s297ms 22 1 1s367ms 1s367ms Aug 28 03 1 1s343ms 1s343ms 05 3 10s754ms 3s584ms 07 2 2s527ms 1s263ms 09 2 2s461ms 1s230ms 10 1 1s277ms 1s277ms 11 1 1s323ms 1s323ms 13 2 2s558ms 1s279ms 15 1 1s296ms 1s296ms 19 1 1s292ms 1s292ms 20 1 1s285ms 1s285ms 23 1 1s303ms 1s303ms Aug 29 00 1 1s314ms 1s314ms 01 1 1s269ms 1s269ms 03 1 1s226ms 1s226ms 04 1 1s260ms 1s260ms 05 2 2s760ms 1s380ms 08 2 2s547ms 1s273ms 09 3 3s669ms 1s223ms 11 2 2s539ms 1s269ms 12 2 2s562ms 1s281ms 13 1 1s232ms 1s232ms 14 1 1s299ms 1s299ms 15 2 2s674ms 1s337ms 16 1 1s320ms 1s320ms 17 2 2s649ms 1s324ms 19 2 2s540ms 1s270ms 20 1 1s253ms 1s253ms 21 2 2s640ms 1s320ms 22 2 2s576ms 1s288ms 23 2 2s582ms 1s291ms Aug 30 00 1 2s539ms 2s539ms 01 3 3s887ms 1s295ms 02 3 3s904ms 1s301ms 04 1 1s319ms 1s319ms 05 4 5s239ms 1s309ms 06 1 1s241ms 1s241ms 07 2 2s419ms 1s209ms 09 1 1s307ms 1s307ms 10 1 1s301ms 1s301ms 12 1 1s300ms 1s300ms 13 3 3s814ms 1s271ms 16 1 1s316ms 1s316ms 20 1 1s564ms 1s564ms 22 1 1s308ms 1s308ms 23 1 1s246ms 1s246ms Aug 31 03 1 1s258ms 1s258ms 05 4 5s304ms 1s326ms 07 1 1s330ms 1s330ms 08 3 3s912ms 1s304ms 09 1 1s322ms 1s322ms 12 1 1s287ms 1s287ms 14 1 1s227ms 1s227ms 15 3 3s820ms 1s273ms 18 1 1s242ms 1s242ms [ User: pubeu - Total duration: 1m43s - Times executed: 79 ]
[ User: qaeu - Total duration: 5s431ms - Times executed: 4 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1228415') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1228415') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-08-28 05:54:40 Duration: 8s Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1243565') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1243565') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-08-30 00:02:00 Duration: 2s539ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1897750') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1897750') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-08-26 15:33:07 Duration: 1s571ms Bind query: yes
6 121 2m42s 1s183ms 1s607ms 1s343ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or receptorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Aug 25 00 1 1s326ms 1s326ms 01 3 3s996ms 1s332ms 02 1 1s352ms 1s352ms 04 2 2s596ms 1s298ms 05 4 5s607ms 1s401ms 06 1 1s300ms 1s300ms 13 1 1s313ms 1s313ms 15 2 2s542ms 1s271ms 16 1 1s310ms 1s310ms 20 1 1s607ms 1s607ms Aug 26 01 1 1s307ms 1s307ms 02 3 3s914ms 1s304ms 03 2 2s686ms 1s343ms 04 1 1s404ms 1s404ms 05 3 4s330ms 1s443ms 07 2 2s807ms 1s403ms 08 1 1s287ms 1s287ms 12 1 1s468ms 1s468ms 16 1 1s240ms 1s240ms 17 1 1s395ms 1s395ms 18 2 2s571ms 1s285ms 19 1 1s317ms 1s317ms 22 2 2s574ms 1s287ms Aug 27 01 1 1s493ms 1s493ms 02 1 1s295ms 1s295ms 03 5 7s238ms 1s447ms 05 2 2s742ms 1s371ms 07 1 1s333ms 1s333ms 09 1 1s369ms 1s369ms 10 1 1s422ms 1s422ms 11 2 2s743ms 1s371ms 14 1 1s369ms 1s369ms 16 1 1s304ms 1s304ms 17 1 1s315ms 1s315ms 20 1 1s183ms 1s183ms 21 1 1s314ms 1s314ms 23 1 1s303ms 1s303ms Aug 28 01 1 1s248ms 1s248ms 02 1 1s323ms 1s323ms 03 1 1s269ms 1s269ms 05 2 2s794ms 1s397ms 06 1 1s227ms 1s227ms 10 2 2s655ms 1s327ms 11 1 1s428ms 1s428ms 12 1 1s305ms 1s305ms 16 1 1s301ms 1s301ms Aug 29 02 1 1s369ms 1s369ms 03 3 3s917ms 1s305ms 04 1 1s347ms 1s347ms 05 2 2s808ms 1s404ms 08 1 1s327ms 1s327ms 09 1 1s224ms 1s224ms 15 2 2s763ms 1s381ms 18 1 1s273ms 1s273ms 19 1 1s294ms 1s294ms 22 1 1s346ms 1s346ms Aug 30 02 1 1s370ms 1s370ms 03 1 1s353ms 1s353ms 05 2 2s784ms 1s392ms 08 3 3s919ms 1s306ms 09 1 1s305ms 1s305ms 10 1 1s268ms 1s268ms 13 1 1s431ms 1s431ms 16 1 1s322ms 1s322ms 17 2 2s538ms 1s269ms 19 2 2s662ms 1s331ms 21 1 1s295ms 1s295ms Aug 31 00 1 1s279ms 1s279ms 01 1 1s304ms 1s304ms 02 2 2s518ms 1s259ms 04 2 2s823ms 1s411ms 05 4 5s271ms 1s317ms 06 2 2s646ms 1s323ms 08 2 2s645ms 1s322ms 09 3 3s911ms 1s303ms 12 1 1s300ms 1s300ms 13 1 1s403ms 1s403ms 17 1 1s594ms 1s594ms 18 1 1s275ms 1s275ms 23 1 1s393ms 1s393ms [ User: pubeu - Total duration: 1m26s - Times executed: 65 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2074283') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2074283') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-08-25 20:08:13 Duration: 1s607ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2078091') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2078091') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-08-31 17:05:53 Duration: 1s594ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2084385') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2084385') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-08-27 03:09:42 Duration: 1s531ms Bind query: yes
7 120 8m41s 1s 7s433ms 4s341ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Aug 25 00 1 1s19ms 1s19ms 05 1 1s9ms 1s9ms 06 1 1s7ms 1s7ms 07 1 5s771ms 5s771ms 12 1 5s645ms 5s645ms 13 1 6s281ms 6s281ms Aug 26 02 2 9s929ms 4s964ms 03 2 9s808ms 4s904ms 04 1 4s676ms 4s676ms 06 1 1s7ms 1s7ms 09 5 21s451ms 4s290ms 11 1 5s374ms 5s374ms 15 1 5s363ms 5s363ms 16 2 6s548ms 3s274ms 17 1 5s609ms 5s609ms 18 1 5s620ms 5s620ms 19 1 5s657ms 5s657ms 21 2 2s42ms 1s21ms 22 2 6s718ms 3s359ms Aug 27 00 1 5s52ms 5s52ms 02 1 4s754ms 4s754ms 03 1 5s353ms 5s353ms 05 1 1s1ms 1s1ms 06 1 1s38ms 1s38ms 12 2 9s678ms 4s839ms 15 1 1s99ms 1s99ms 16 1 4s788ms 4s788ms 17 2 9s886ms 4s943ms 18 1 4s944ms 4s944ms 21 1 7s433ms 7s433ms 23 1 1s27ms 1s27ms Aug 28 01 1 4s976ms 4s976ms 02 1 6s269ms 6s269ms 03 1 6s130ms 6s130ms 04 1 4s886ms 4s886ms 05 1 5s616ms 5s616ms 06 1 5s576ms 5s576ms 07 2 10s227ms 5s113ms 08 4 20s438ms 5s109ms 09 1 4s578ms 4s578ms 11 2 2s54ms 1s27ms 13 1 4s882ms 4s882ms 14 1 5s623ms 5s623ms 16 1 5s783ms 5s783ms 18 1 5s400ms 5s400ms 22 2 10s150ms 5s75ms 23 1 4s849ms 4s849ms Aug 29 04 1 4s579ms 4s579ms 05 4 11s551ms 2s887ms 10 5 25s121ms 5s24ms 13 1 5s135ms 5s135ms 15 2 2s58ms 1s29ms 18 1 1s48ms 1s48ms 20 1 1s32ms 1s32ms Aug 30 01 1 1s44ms 1s44ms 03 1 5s20ms 5s20ms 04 2 10s156ms 5s78ms 05 5 14s207ms 2s841ms 07 2 10s40ms 5s20ms 10 4 21s56ms 5s264ms 11 1 5s818ms 5s818ms 15 1 5s548ms 5s548ms 18 4 21s619ms 5s404ms Aug 31 03 1 5s237ms 5s237ms 04 11 59s230ms 5s384ms 05 1 1s35ms 1s35ms 07 1 6s39ms 6s39ms 09 1 1s160ms 1s160ms 12 1 5s919ms 5s919ms 14 1 5s962ms 5s962ms 16 1 6s174ms 6s174ms 17 1 6s95ms 6s95ms 23 1 5s68ms 5s68ms [ User: pubeu - Total duration: 4m24s - Times executed: 60 ]
[ User: qaeu - Total duration: 3s101ms - Times executed: 3 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1335649' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-08-27 21:56:14 Duration: 7s433ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1386164' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-08-25 13:39:50 Duration: 6s281ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1320911' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-08-28 02:48:58 Duration: 6s269ms Bind query: yes
8 84 6m54s 1s59ms 12s283ms 4s928ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Aug 25 01 1 1s292ms 1s292ms Aug 26 02 1 1s283ms 1s283ms 03 2 4s597ms 2s298ms 06 1 6s295ms 6s295ms 08 1 4s784ms 4s784ms 14 2 22s175ms 11s87ms 19 1 2s717ms 2s717ms 20 2 2s713ms 1s356ms 22 1 1s333ms 1s333ms 23 1 1s149ms 1s149ms Aug 27 00 1 10s533ms 10s533ms 01 1 1s145ms 1s145ms 02 1 1s294ms 1s294ms 03 4 10s905ms 2s726ms 04 9 1m42s 11s420ms 09 1 1s59ms 1s59ms 10 3 22s915ms 7s638ms 11 1 10s193ms 10s193ms 22 1 2s62ms 2s62ms 23 1 2s531ms 2s531ms Aug 28 02 1 1s158ms 1s158ms 03 1 1s129ms 1s129ms 10 1 1s66ms 1s66ms 11 1 1s326ms 1s326ms 15 1 1s113ms 1s113ms 17 1 2s454ms 2s454ms 18 1 1s202ms 1s202ms 19 1 10s597ms 10s597ms 20 1 1s78ms 1s78ms 21 1 1s329ms 1s329ms 22 4 7s786ms 1s946ms Aug 29 08 1 2s766ms 2s766ms 09 1 1s65ms 1s65ms 10 2 4s3ms 2s1ms 12 1 5s938ms 5s938ms 16 1 5s423ms 5s423ms 18 1 5s78ms 5s78ms 20 1 1s70ms 1s70ms 21 1 1s435ms 1s435ms Aug 30 00 3 34s996ms 11s665ms 01 1 2s511ms 2s511ms 02 2 3s653ms 1s826ms 05 5 54s267ms 10s853ms 06 1 1s180ms 1s180ms 07 1 10s268ms 10s268ms 14 1 2s716ms 2s716ms 16 1 3s90ms 3s90ms 18 1 1s86ms 1s86ms 22 2 3s805ms 1s902ms Aug 31 00 1 1s127ms 1s127ms 10 2 4s855ms 2s427ms 13 1 10s829ms 10s829ms 16 1 4s598ms 4s598ms 20 1 2s974ms 2s974ms 21 1 1s257ms 1s257ms [ User: pubeu - Total duration: 3m38s - Times executed: 43 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2084677') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-08-27 04:56:07 Duration: 12s283ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2086129') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-08-30 00:29:10 Duration: 12s175ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2086129') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-08-30 00:29:15 Duration: 12s125ms Database: ctdprd51 User: pubeu Bind query: yes
9 81 1m55s 1s297ms 2s168ms 1s428ms select t.nm, t.nm_html nmhtml, t.secondary_nm secondarynm, t.acc_txt acc, ? || t.nm accquerystr, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term t where t.object_type_id = ? and regexp_replace(upper(substring(t.nm, ?, ?)), ?, ?) = ? order by t.nm_sort limit ?;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Aug 25 04 1 1s509ms 1s509ms 05 3 4s222ms 1s407ms 06 1 1s457ms 1s457ms 08 1 1s480ms 1s480ms 12 1 1s339ms 1s339ms 16 1 1s331ms 1s331ms 22 1 1s320ms 1s320ms Aug 26 00 1 1s472ms 1s472ms 02 1 1s352ms 1s352ms 04 1 1s432ms 1s432ms 05 2 2s694ms 1s347ms 08 1 1s491ms 1s491ms 14 4 5s777ms 1s444ms 21 1 1s476ms 1s476ms 23 1 1s440ms 1s440ms Aug 27 01 1 1s490ms 1s490ms 04 3 4s348ms 1s449ms 05 2 2s939ms 1s469ms 06 2 2s974ms 1s487ms 08 4 5s597ms 1s399ms 09 2 2s958ms 1s479ms 11 1 1s488ms 1s488ms Aug 28 04 1 2s168ms 2s168ms 05 2 2s959ms 1s479ms 06 1 1s339ms 1s339ms 07 1 1s332ms 1s332ms 09 4 5s453ms 1s363ms 10 1 1s407ms 1s407ms Aug 29 02 3 4s221ms 1s407ms 03 2 2s802ms 1s401ms 05 3 4s39ms 1s346ms 06 1 1s471ms 1s471ms 07 2 2s640ms 1s320ms 08 1 1s297ms 1s297ms 10 4 5s862ms 1s465ms 15 1 1s510ms 1s510ms 18 1 1s318ms 1s318ms 19 4 5s894ms 1s473ms 21 1 1s513ms 1s513ms Aug 30 05 2 2s858ms 1s429ms 06 1 1s514ms 1s514ms 10 2 2s696ms 1s348ms 15 1 1s392ms 1s392ms 16 3 4s172ms 1s390ms Aug 31 05 2 2s791ms 1s395ms 06 1 1s417ms 1s417ms [ User: pubeu - Total duration: 46s660ms - Times executed: 33 ]
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-08-28 04:53:24 Duration: 2s168ms Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-08-30 06:21:04 Duration: 1s514ms Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'C' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-08-29 19:50:45 Duration: 1s513ms Bind query: yes
10 72 44m52s 1s326ms 6m30s 37s402ms select * from pgbulkload.pg_bulkload (?);Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Aug 27 13 12 1m26s 7s198ms 14 27 20m19s 45s150ms 18 6 1m6s 11s139ms 21 6 14m23s 2m23s 22 14 3m55s 16s831ms 23 4 3m18s 49s634ms Aug 28 00 3 22s763ms 7s587ms [ User: load - Total duration: 13m37s - Times executed: 23 ]
[ Application: pg_bulkload - Total duration: 13m37s - Times executed: 23 ]
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.GENE_DISEASE_REFERENCE,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.log,parse-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.DUPE}');
Date: 2024-08-27 21:12:36 Duration: 6m30s Database: ctdprd51 User: load Application: pg_bulkload Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.DAG_PATH,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.log,parse-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.DUPE}');
Date: 2024-08-27 21:39:50 Duration: 5m4s Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=edit.DB_LINK,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.log,parse-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.DUPE}');
Date: 2024-08-27 14:11:03 Duration: 3m51s Bind query: yes
11 72 4m54s 1s20ms 34s407ms 4s91ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Aug 25 07 10 15s775ms 1s577ms 08 2 16s125ms 8s62ms Aug 26 05 14 18s532ms 1s323ms 06 1 14s426ms 14s426ms 10 2 16s79ms 8s39ms 11 4 31s926ms 7s981ms 12 4 32s504ms 8s126ms 13 2 15s477ms 7s738ms Aug 27 04 3 3s227ms 1s75ms 07 1 1s118ms 1s118ms 11 1 1s204ms 1s204ms Aug 28 02 4 6s817ms 1s704ms 03 1 1s660ms 1s660ms 08 1 2s258ms 2s258ms 15 4 4s337ms 1s84ms 19 1 1s462ms 1s462ms 22 2 7s420ms 3s710ms Aug 29 08 2 4s196ms 2s98ms 12 1 7s619ms 7s619ms 13 1 1s129ms 1s129ms Aug 30 03 1 1s57ms 1s57ms 05 2 1m7s 33s866ms 08 1 14s530ms 14s530ms Aug 31 14 1 1s202ms 1s202ms 15 2 2s294ms 1s147ms 16 1 1s20ms 1s20ms 17 1 1s305ms 1s305ms 18 1 1s58ms 1s58ms 19 1 1s80ms 1s80ms [ User: pubeu - Total duration: 2m40s - Times executed: 50 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2086129') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-08-30 05:11:20 Duration: 34s407ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2086129') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-08-30 05:08:52 Duration: 33s325ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2085868') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-08-30 08:04:58 Duration: 14s530ms Database: ctdprd51 User: pubeu Bind query: yes
12 67 4m4s 1s123ms 26s13ms 3s653ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ? offset ?;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Aug 25 03 1 2s226ms 2s226ms 05 2 7s951ms 3s975ms 15 1 11s442ms 11s442ms 16 1 1s506ms 1s506ms 20 1 1s858ms 1s858ms Aug 26 02 1 2s657ms 2s657ms 03 1 17s815ms 17s815ms 11 1 13s667ms 13s667ms 14 1 12s512ms 12s512ms 20 1 1s849ms 1s849ms 22 2 6s270ms 3s135ms 23 1 5s437ms 5s437ms Aug 27 05 2 32s442ms 16s221ms 12 1 1s633ms 1s633ms 20 1 6s636ms 6s636ms 22 1 1s123ms 1s123ms Aug 28 02 9 11s731ms 1s303ms 03 1 1s202ms 1s202ms 04 1 1s257ms 1s257ms 05 1 1s521ms 1s521ms 19 1 1s612ms 1s612ms 22 5 7s278ms 1s455ms Aug 29 04 1 1s222ms 1s222ms 05 5 6s188ms 1s237ms 07 1 10s772ms 10s772ms 08 1 11s326ms 11s326ms 09 1 5s32ms 5s32ms 19 1 1s305ms 1s305ms Aug 30 01 1 1s829ms 1s829ms 02 9 12s677ms 1s408ms 07 1 1s445ms 1s445ms 09 1 4s554ms 4s554ms 15 1 1s243ms 1s243ms 21 1 1s166ms 1s166ms Aug 31 00 1 11s408ms 11s408ms 07 1 3s970ms 3s970ms 14 1 5s950ms 5s950ms 15 1 1s270ms 1s270ms 16 1 10s615ms 10s615ms 19 1 1s197ms 1s197ms [ User: pubeu - Total duration: 2m37s - Times executed: 29 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2077874') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 4288600;
Date: 2024-08-27 05:18:25 Duration: 26s13ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2083979') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 2306950;
Date: 2024-08-26 03:22:04 Duration: 17s815ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2072716') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 1766950;
Date: 2024-08-26 11:08:12 Duration: 13s667ms Database: ctdprd51 User: pubeu Bind query: yes
13 42 52s390ms 1s5ms 1s759ms 1s247ms select fg.nm fromgenesymbol, fg.acc_txt fromgeneacc, tg.nm togenesymbol, tg.acc_txt togeneacc, ft.nm fromtaxonnm, ft.secondary_nm fromtaxoncommonnm, ft.acc_txt fromtaxonacc, tt.nm totaxonnm, tt.secondary_nm totaxoncommonnm, tt.acc_txt totaxonacc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( select string_agg(ggt.throughput_txt, ? order by ggt.throughput_txt) from gene_gene_ref_throughput ggt where ggt.gene_gene_reference_id = ggr.id) throughput, count(*) over () fullrowcount from gene_gene_reference ggr inner join term fg on ggr.from_gene_id = fg.id inner join term tg on ggr.to_gene_id = tg.id inner join term ft on ggr.from_taxon_id = ft.id inner join term tt on ggr.to_taxon_id = tt.id where ggr.reference_id = ? order by fg.nm_sort, tg.nm_sort limit ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Aug 25 05 4 5s399ms 1s349ms Aug 26 04 1 1s127ms 1s127ms 05 4 5s943ms 1s485ms 11 1 1s239ms 1s239ms 18 1 1s212ms 1s212ms 23 2 2s395ms 1s197ms Aug 27 05 4 5s153ms 1s288ms 21 1 1s43ms 1s43ms Aug 28 05 4 5s682ms 1s420ms 06 1 1s173ms 1s173ms 09 1 1s5ms 1s5ms 11 2 2s245ms 1s122ms 15 1 1s261ms 1s261ms 20 1 1s149ms 1s149ms Aug 29 05 4 4s414ms 1s103ms 15 1 1s17ms 1s17ms Aug 30 03 1 1s43ms 1s43ms 05 4 5s335ms 1s333ms Aug 31 03 1 1s34ms 1s34ms 05 3 3s513ms 1s171ms [ User: pubeu - Total duration: 19s525ms - Times executed: 16 ]
[ User: qaeu - Total duration: 6s574ms - Times executed: 5 ]
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SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '111363' ORDER BY fg.nm_sort, tg.nm_sort LIMIT 50;
Date: 2024-08-28 05:43:38 Duration: 1s759ms Bind query: yes
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SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '111363' ORDER BY fg.nm_sort, tg.nm_sort LIMIT 50;
Date: 2024-08-30 05:38:12 Duration: 1s661ms Bind query: yes
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SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '111363' ORDER BY fg.nm_sort, tg.nm_sort LIMIT 50;
Date: 2024-08-26 05:43:12 Duration: 1s527ms Database: ctdprd51 User: qaeu Bind query: yes
14 41 1m33s 1s12ms 3s698ms 2s289ms with recursive sub_node ( object_id, id, path, lvl ) as ( select n.object_id, n.id, array[n.nm_sort], ? from dag_node n where n.object_id = ? union all select n.object_id, n.id, cast(path || n.nm_sort as varchar(?)[]), sn.lvl + ? from dag_node n inner join sub_node sn on (n.parent_id = sn.id)) select distinct t.nm prinm, t.nm_html prinmhtml, t.secondary_nm secondarynm, t.acc_db_cd accdbcd, t.acc_txt termacc, t.is_leaf isleaf, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_genes hasgenes, sn.lvl, sn.path, max(sn.lvl) over () maxlvl, t.has_phenotypes hasphenotypes from sub_node sn inner join term t on sn.object_id = t.id where sn.lvl <= ? order by sn.path;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Aug 25 05 4 8s963ms 2s240ms Aug 26 05 4 8s808ms 2s202ms Aug 27 05 4 8s708ms 2s177ms 06 1 3s253ms 3s253ms 09 1 2s420ms 2s420ms 12 1 1s895ms 1s895ms Aug 28 00 1 1s305ms 1s305ms 05 4 9s122ms 2s280ms 10 2 4s732ms 2s366ms Aug 29 05 4 8s812ms 2s203ms 10 1 2s602ms 2s602ms 13 1 1s946ms 1s946ms 15 2 4s451ms 2s225ms 20 1 3s286ms 3s286ms Aug 30 04 1 3s226ms 3s226ms 05 4 9s590ms 2s397ms Aug 31 05 4 8s855ms 2s213ms 12 1 1s884ms 1s884ms [ User: pubeu - Total duration: 49s458ms - Times executed: 17 ]
[ User: qaeu - Total duration: 27s338ms - Times executed: 8 ]
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '592227' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-08-28 10:56:32 Duration: 3s698ms Database: ctdprd51 User: qaeu Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '591154' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-08-28 05:35:13 Duration: 3s492ms Database: ctdprd51 User: pubeu Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '591154' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-08-28 05:40:12 Duration: 3s459ms Database: ctdprd51 User: qaeu Bind query: yes
15 41 59s634ms 1s360ms 2s270ms 1s454ms select coalesce(d.abbr_display, d.nm_display) nm # ?, d.description # ?, coalesce(d.abbr, d.nm) anchor # ?, get_homepage_url (d.id) url # ? from db d # ? where d.id in (# ? select l.db_id # ? from db_link l # ? where l.type_cd = ? # ? and l.object_type_id = ?) # ? order by ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Aug 25 05 2 2s849ms 1s424ms 06 1 1s399ms 1s399ms 07 1 1s372ms 1s372ms 19 1 1s363ms 1s363ms 22 1 1s405ms 1s405ms Aug 26 05 2 2s772ms 1s386ms 10 1 1s371ms 1s371ms 18 1 1s389ms 1s389ms Aug 27 03 1 1s399ms 1s399ms 05 2 2s775ms 1s387ms 09 5 6s886ms 1s377ms 18 1 1s372ms 1s372ms Aug 28 02 1 2s213ms 2s213ms 05 2 3s659ms 1s829ms 10 1 1s734ms 1s734ms 11 1 1s450ms 1s450ms 15 1 1s400ms 1s400ms 22 1 1s379ms 1s379ms Aug 29 03 1 1s401ms 1s401ms 05 2 2s816ms 1s408ms 07 1 1s423ms 1s423ms 11 1 1s395ms 1s395ms 15 1 1s411ms 1s411ms Aug 30 05 2 2s798ms 1s399ms 06 1 1s406ms 1s406ms 10 1 1s412ms 1s412ms 21 1 1s412ms 1s412ms Aug 31 05 2 2s794ms 1s397ms 16 1 1s790ms 1s790ms 19 1 1s377ms 1s377ms [ User: pubeu - Total duration: 17s120ms - Times executed: 12 ]
[ User: qaeu - Total duration: 1s450ms - Times executed: 1 ]
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-08-28 05:39:10 Duration: 2s270ms Bind query: yes
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-08-28 02:54:04 Duration: 2s213ms Bind query: yes
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-08-31 16:28:02 Duration: 1s790ms Database: ctdprd51 User: pubeu Bind query: yes
16 39 47s284ms 1s172ms 1s288ms 1s212ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where phenotypeterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and associatedterm.object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort desc limit ? offset ?;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Aug 29 05 39 47s284ms 1s212ms [ User: pubeu - Total duration: 2s433ms - Times executed: 2 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1240927'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort DESC LIMIT 50 OFFSET 2750;
Date: 2024-08-29 05:41:05 Duration: 1s288ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1240927'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort DESC LIMIT 50 OFFSET 2750;
Date: 2024-08-29 05:41:05 Duration: 1s278ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1240927'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort DESC LIMIT 50 OFFSET 42150;
Date: 2024-08-29 05:42:08 Duration: 1s276ms Bind query: yes
17 25 14m5s 33s625ms 34s595ms 33s806ms copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Aug 25 06 1 33s659ms 33s659ms 10 1 33s755ms 33s755ms 14 1 33s992ms 33s992ms 18 1 33s703ms 33s703ms Aug 26 06 1 33s747ms 33s747ms 10 1 33s868ms 33s868ms 14 1 33s678ms 33s678ms 18 1 33s810ms 33s810ms Aug 27 06 1 33s797ms 33s797ms 10 1 33s625ms 33s625ms 14 1 33s772ms 33s772ms 18 1 33s831ms 33s831ms Aug 28 06 1 33s802ms 33s802ms 10 1 33s699ms 33s699ms 14 1 33s748ms 33s748ms 18 1 33s740ms 33s740ms Aug 29 06 1 33s867ms 33s867ms 10 1 33s696ms 33s696ms 14 1 33s820ms 33s820ms 18 1 33s740ms 33s740ms Aug 30 06 1 33s979ms 33s979ms 10 1 33s716ms 33s716ms 14 1 33s810ms 33s810ms 18 1 33s709ms 33s709ms Aug 31 19 1 34s595ms 34s595ms [ User: postgres - Total duration: 13m30s - Times executed: 24 ]
[ Application: pg_dump - Total duration: 13m30s - Times executed: 24 ]
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-08-31 19:57:19 Duration: 34s595ms
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-08-25 14:05:35 Duration: 33s992ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-08-30 06:05:35 Duration: 33s979ms Database: ctdprd51 User: postgres Application: pg_dump
18 25 5m49s 1s900ms 14s865ms 13s970ms copy edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Aug 25 06 1 14s443ms 14s443ms 10 1 14s459ms 14s459ms 14 1 14s402ms 14s402ms 18 1 14s417ms 14s417ms Aug 26 06 1 14s373ms 14s373ms 10 1 14s310ms 14s310ms 14 1 14s509ms 14s509ms 18 1 14s381ms 14s381ms Aug 27 06 1 14s357ms 14s357ms 10 1 14s490ms 14s490ms 14 1 1s900ms 1s900ms 18 1 14s578ms 14s578ms Aug 28 06 1 14s461ms 14s461ms 10 1 14s417ms 14s417ms 14 1 14s468ms 14s468ms 18 1 14s458ms 14s458ms Aug 29 06 1 14s497ms 14s497ms 10 1 14s526ms 14s526ms 14 1 14s419ms 14s419ms 18 1 14s512ms 14s512ms Aug 30 06 1 14s418ms 14s418ms 10 1 14s587ms 14s587ms 14 1 14s508ms 14s508ms 18 1 14s483ms 14s483ms Aug 31 18 1 14s865ms 14s865ms [ User: postgres - Total duration: 5m49s - Times executed: 25 ]
[ Application: pg_dump - Total duration: 5m49s - Times executed: 25 ]
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-08-31 18:30:16 Duration: 14s865ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-08-30 10:00:16 Duration: 14s587ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-08-27 18:00:16 Duration: 14s578ms Database: ctdprd51 User: postgres Application: pg_dump
19 25 2m46s 6s602ms 7s7ms 6s657ms copy edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Aug 25 06 1 6s632ms 6s632ms 10 1 6s639ms 6s639ms 14 1 6s638ms 6s638ms 18 1 6s645ms 6s645ms Aug 26 06 1 6s617ms 6s617ms 10 1 6s628ms 6s628ms 14 1 6s705ms 6s705ms 18 1 6s633ms 6s633ms Aug 27 06 1 6s602ms 6s602ms 10 1 6s648ms 6s648ms 14 1 6s651ms 6s651ms 18 1 6s645ms 6s645ms Aug 28 06 1 6s645ms 6s645ms 10 1 6s620ms 6s620ms 14 1 6s637ms 6s637ms 18 1 6s658ms 6s658ms Aug 29 06 1 6s651ms 6s651ms 10 1 6s657ms 6s657ms 14 1 6s634ms 6s634ms 18 1 6s639ms 6s639ms Aug 30 06 1 6s631ms 6s631ms 10 1 6s673ms 6s673ms 14 1 6s642ms 6s642ms 18 1 6s639ms 6s639ms Aug 31 18 1 7s7ms 7s7ms -
COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-08-31 18:30:25 Duration: 7s7ms
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COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-08-26 14:00:24 Duration: 6s705ms
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COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-08-30 10:00:25 Duration: 6s673ms
20 25 2m27s 5s863ms 5s997ms 5s903ms copy edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Aug 25 06 1 5s887ms 5s887ms 10 1 5s897ms 5s897ms 14 1 5s874ms 5s874ms 18 1 5s898ms 5s898ms Aug 26 06 1 5s888ms 5s888ms 10 1 5s863ms 5s863ms 14 1 5s899ms 5s899ms 18 1 5s873ms 5s873ms Aug 27 06 1 5s869ms 5s869ms 10 1 5s881ms 5s881ms 14 1 5s886ms 5s886ms 18 1 5s918ms 5s918ms Aug 28 06 1 5s891ms 5s891ms 10 1 5s893ms 5s893ms 14 1 5s925ms 5s925ms 18 1 5s881ms 5s881ms Aug 29 06 1 5s910ms 5s910ms 10 1 5s918ms 5s918ms 14 1 5s917ms 5s917ms 18 1 5s909ms 5s909ms Aug 30 06 1 5s975ms 5s975ms 10 1 5s923ms 5s923ms 14 1 5s907ms 5s907ms 18 1 5s894ms 5s894ms Aug 31 18 1 5s997ms 5s997ms -
COPY edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-08-31 18:31:08 Duration: 5s997ms
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COPY edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-08-30 06:01:06 Duration: 5s975ms
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COPY edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-08-28 14:01:06 Duration: 5s925ms
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 1h57m12s 1h57m12s 1h57m12s 1 1h57m12s select pub2.maint_term_derive_data ();Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Aug 28 06 1 1h57m12s 1h57m12s -
select pub2.maint_term_derive_data ();
Date: 2024-08-28 06:12:01 Duration: 1h57m12s Bind query: yes
2 1h37m39s 1h37m39s 1h37m39s 1 1h37m39s select pub2.maint_gene_chem_ref_gene_form_refresh ();Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Aug 28 02 1 1h37m39s 1h37m39s -
select pub2.maint_gene_chem_ref_gene_form_refresh ();
Date: 2024-08-28 02:18:43 Duration: 1h37m39s Bind query: yes
3 1h1m8s 1h1m8s 1h1m8s 1 1h1m8s select maint_term_derive_nm_fts ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Aug 28 03 1 1h1m8s 1h1m8s -
SELECT maint_term_derive_nm_fts ();
Date: 2024-08-28 03:22:45 Duration: 1h1m8s Bind query: yes
4 0ms 46m7s 46m7s 1 46m7s vacuum full analyze;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Aug 28 04 1 46m7s 46m7s -
VACUUM FULL ANALYZE;
Date: 2024-08-28 04:14:26 Duration: 46m7s Bind query: yes
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VACUUM FULL ANALYZE;
Date: 2024-08-28 03:28:19 Duration: 0ms
5 40m23s 40m23s 40m23s 1 40m23s select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.gene_go_annot gga, pub2.phenotype_term_reference ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Aug 27 21 1 40m23s 40m23s -
select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.GENE_GO_ANNOT gga, pub2.PHENOTYPE_TERM_REFERENCE ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');
Date: 2024-08-27 21:01:24 Duration: 40m23s Bind query: yes
6 38m23s 38m23s 38m23s 1 38m23s select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.object_type where cd = ?), ptr.term_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.phenotype_term_reference ptr, pub2.phenotype_term_reference ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Aug 27 20 1 38m23s 38m23s -
select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');
Date: 2024-08-27 20:20:55 Duration: 38m23s Bind query: yes
7 34m36s 34m36s 34m36s 1 34m36s select i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) from edit.ixn i, edit.reference_ixn r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in (...) order by i.id asc;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Aug 27 18 1 34m36s 34m36s -
SELECT i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) FROM edit.IXN i, edit.REFERENCE_IXN r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in ('bogusName') order by i.id asc;
Date: 2024-08-27 18:50:45 Duration: 34m36s Bind query: yes
8 33m21s 33m21s 33m21s 1 33m21s select pub2.maint_cached_value_refresh_data_metrics ();Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Aug 28 06 1 33m21s 33m21s -
select pub2.maint_cached_value_refresh_data_metrics ();
Date: 2024-08-28 06:55:18 Duration: 33m21s Bind query: yes
-
select pub2.maint_cached_value_refresh_data_metrics ();
Date: 2024-08-28 06:51:05 Duration: 0ms
9 28m17s 28m17s 28m17s 1 28m17s update pub2.gene_disease gd set exposure_reference_qty = ( select count(distinct reference_id) from pub2.gene_disease_reference gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub2.reference r where has_exposures = true));Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Aug 28 00 1 28m17s 28m17s -
update pub2.GENE_DISEASE gd set exposure_reference_qty = ( select count(distinct reference_id) from pub2.GENE_DISEASE_REFERENCE gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub2.REFERENCE r where has_exposures = true));
Date: 2024-08-28 00:35:37 Duration: 28m17s Bind query: yes
10 24m14s 24m14s 24m14s 1 24m14s insert into pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.gene_go_annot;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Aug 27 18 1 24m14s 24m14s -
insert into pub2.GENE_GO_ANNOT (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.GENE_GO_ANNOT;
Date: 2024-08-27 18:07:45 Duration: 24m14s Bind query: yes
11 23m59s 23m59s 23m59s 1 23m59s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Aug 31 19 1 23m59s 23m59s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-08-31 19:43:54 Duration: 23m59s
12 23m53s 23m53s 23m53s 1 23m53s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Aug 31 19 1 23m53s 23m53s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-08-31 19:00:54 Duration: 23m53s
13 16m28s 17m15s 16m39s 7 1h56m37s select maint_query_logs_archive ();Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Aug 25 00 1 16m28s 16m28s Aug 26 00 1 16m29s 16m29s Aug 27 00 1 16m36s 16m36s Aug 28 00 1 16m44s 16m44s Aug 29 00 1 16m30s 16m30s Aug 30 00 1 17m15s 17m15s Aug 31 00 1 16m32s 16m32s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-08-30 00:17:17 Duration: 17m15s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-08-28 00:16:45 Duration: 16m44s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-08-27 00:16:37 Duration: 16m36s
14 12m26s 12m26s 12m26s 1 12m26s alter table pub2.term_enrichment_agent add constraint term_enr_agent_term_enr_fk foreign key (term_id, enriched_term_id) references term_enrichment (term_id, enriched_term_id);Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Aug 27 23 1 12m26s 12m26s -
ALTER TABLE pub2.term_enrichment_agent ADD CONSTRAINT term_enr_agent_term_enr_fk FOREIGN KEY (term_id, enriched_term_id) REFERENCES term_enrichment (term_id, enriched_term_id);
Date: 2024-08-27 23:42:31 Duration: 12m26s Bind query: yes
15 1s433ms 3m23s 1m9s 14 16m14s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Aug 25 04 1 1s581ms 1s581ms Aug 26 16 1 3m23s 3m23s Aug 27 00 1 1s433ms 1s433ms Aug 28 00 1 16s500ms 16s500ms 12 1 3m11s 3m11s 14 1 2s155ms 2s155ms 19 1 1s525ms 1s525ms 23 1 2m3s 2m3s Aug 29 02 1 2m59s 2m59s Aug 30 00 1 46s163ms 46s163ms 05 1 1m40s 1m40s 08 1 1m43s 1m43s 16 1 1s605ms 1s605ms Aug 31 05 1 1s549ms 1s549ms [ User: pubeu - Total duration: 7m26s - Times executed: 6 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1244203') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-08-26 16:55:49 Duration: 3m23s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1209780') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-08-28 12:11:02 Duration: 3m11s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1232638') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-08-29 02:01:02 Duration: 2m59s Bind query: yes
16 1s326ms 6m30s 37s402ms 72 44m52s select * from pgbulkload.pg_bulkload (?);Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Aug 27 13 12 1m26s 7s198ms 14 27 20m19s 45s150ms 18 6 1m6s 11s139ms 21 6 14m23s 2m23s 22 14 3m55s 16s831ms 23 4 3m18s 49s634ms Aug 28 00 3 22s763ms 7s587ms [ User: load - Total duration: 13m37s - Times executed: 23 ]
[ Application: pg_bulkload - Total duration: 13m37s - Times executed: 23 ]
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.GENE_DISEASE_REFERENCE,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.log,parse-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.DUPE}');
Date: 2024-08-27 21:12:36 Duration: 6m30s Database: ctdprd51 User: load Application: pg_bulkload Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.DAG_PATH,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.log,parse-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.DUPE}');
Date: 2024-08-27 21:39:50 Duration: 5m4s Bind query: yes
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=edit.DB_LINK,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.log,parse-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.DUPE}');
Date: 2024-08-27 14:11:03 Duration: 3m51s Bind query: yes
17 33s625ms 34s595ms 33s806ms 25 14m5s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Aug 25 06 1 33s659ms 33s659ms 10 1 33s755ms 33s755ms 14 1 33s992ms 33s992ms 18 1 33s703ms 33s703ms Aug 26 06 1 33s747ms 33s747ms 10 1 33s868ms 33s868ms 14 1 33s678ms 33s678ms 18 1 33s810ms 33s810ms Aug 27 06 1 33s797ms 33s797ms 10 1 33s625ms 33s625ms 14 1 33s772ms 33s772ms 18 1 33s831ms 33s831ms Aug 28 06 1 33s802ms 33s802ms 10 1 33s699ms 33s699ms 14 1 33s748ms 33s748ms 18 1 33s740ms 33s740ms Aug 29 06 1 33s867ms 33s867ms 10 1 33s696ms 33s696ms 14 1 33s820ms 33s820ms 18 1 33s740ms 33s740ms Aug 30 06 1 33s979ms 33s979ms 10 1 33s716ms 33s716ms 14 1 33s810ms 33s810ms 18 1 33s709ms 33s709ms Aug 31 19 1 34s595ms 34s595ms [ User: postgres - Total duration: 13m30s - Times executed: 24 ]
[ Application: pg_dump - Total duration: 13m30s - Times executed: 24 ]
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-08-31 19:57:19 Duration: 34s595ms
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-08-25 14:05:35 Duration: 33s992ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-08-30 06:05:35 Duration: 33s979ms Database: ctdprd51 User: postgres Application: pg_dump
18 1s900ms 14s865ms 13s970ms 25 5m49s copy edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Aug 25 06 1 14s443ms 14s443ms 10 1 14s459ms 14s459ms 14 1 14s402ms 14s402ms 18 1 14s417ms 14s417ms Aug 26 06 1 14s373ms 14s373ms 10 1 14s310ms 14s310ms 14 1 14s509ms 14s509ms 18 1 14s381ms 14s381ms Aug 27 06 1 14s357ms 14s357ms 10 1 14s490ms 14s490ms 14 1 1s900ms 1s900ms 18 1 14s578ms 14s578ms Aug 28 06 1 14s461ms 14s461ms 10 1 14s417ms 14s417ms 14 1 14s468ms 14s468ms 18 1 14s458ms 14s458ms Aug 29 06 1 14s497ms 14s497ms 10 1 14s526ms 14s526ms 14 1 14s419ms 14s419ms 18 1 14s512ms 14s512ms Aug 30 06 1 14s418ms 14s418ms 10 1 14s587ms 14s587ms 14 1 14s508ms 14s508ms 18 1 14s483ms 14s483ms Aug 31 18 1 14s865ms 14s865ms [ User: postgres - Total duration: 5m49s - Times executed: 25 ]
[ Application: pg_dump - Total duration: 5m49s - Times executed: 25 ]
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-08-31 18:30:16 Duration: 14s865ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-08-30 10:00:16 Duration: 14s587ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-08-27 18:00:16 Duration: 14s578ms Database: ctdprd51 User: postgres Application: pg_dump
19 3s532ms 33m4s 13s276ms 222 49m7s select g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(r.acc_txt, ? order by r.acc_txt) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id group by g.nm, g.acc_txt, d.nm, d.acc_db_cd || ? || d.acc_txt, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by g.nm, d.nm;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Aug 28 12 222 49m7s 13s276ms [ User: qaeu - Total duration: 33m4s - Times executed: 1 ]
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-08-28 12:02:04 Duration: 33m4s Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-08-28 12:26:45 Duration: 5s645ms Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-08-28 12:20:35 Duration: 5s628ms Bind query: yes
20 1s964ms 24s744ms 10s462ms 581 1h41m18s select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Aug 27 06 2 4s113ms 2s56ms Aug 29 22 39 6m25s 9s878ms 23 365 1h4m54s 10s670ms Aug 30 00 166 28m37s 10s345ms 01 9 1m17s 8s599ms [ User: pubeu - Total duration: 35m27s - Times executed: 198 ]
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SELECT /* BatchChemGODAO */ 'd000638' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1337831)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-08-29 23:34:14 Duration: 24s744ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'd000638' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1337831)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-08-30 00:00:49 Duration: 24s186ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'd000638' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1337831)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-08-29 23:34:10 Duration: 23s148ms Bind query: yes
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 1s158ms 1 1s158ms 1s158ms 1s158ms select distinct ptr.phenotype_id, ptr.term_id, i.action_type_nm, i.action_type_cd, i.action_degree_type_nm, i.action_degree_type_cd from pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.IXN_AXN i where ptr.ixn_id = i.ixn_id;Times Reported Time consuming bind #1
Day Hour Count Duration Avg duration Aug 31 00 1 1s158ms 1s158ms -
select distinct ptr.phenotype_id, ptr.term_id, i.action_type_nm, i.action_type_cd, i.action_degree_type_nm, i.action_degree_type_cd from pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.IXN_AXN i where ptr.ixn_id = i.ixn_id;
Date: 2024-08-28 00:00:11 Duration: 1s158ms Database: postgres
2 1s3ms 1 1s3ms 1s3ms 1s3ms SELECT /* BatchDiseaseGeneAssnsDAO */ $1 "Input";Times Reported Time consuming bind #2
Day Hour Count Duration Avg duration 23 1 1s3ms 1s3ms -
SELECT /* BatchDiseaseGeneAssnsDAO */ $1 "Input";
Date: 2024-08-30 00:07:19 Duration: 1s3ms Database: postgres parameters: $1 = 'd000638'
3 0ms 125 0ms 0ms 0ms ;Times Reported Time consuming bind #3
Day Hour Count Duration Avg duration Aug 24 11 1 0ms 0ms 12 1 0ms 0ms Aug 25 08 2 0ms 0ms 09 2 0ms 0ms Aug 26 06 2 0ms 0ms 07 2 0ms 0ms 08 8 0ms 0ms 11 2 0ms 0ms 12 2 0ms 0ms 15 4 0ms 0ms 17 4 0ms 0ms Aug 27 06 2 0ms 0ms 07 2 0ms 0ms 08 4 0ms 0ms 11 2 0ms 0ms 12 2 0ms 0ms 16 2 0ms 0ms 20 2 0ms 0ms Aug 28 06 6 0ms 0ms 07 2 0ms 0ms 09 10 0ms 0ms 16 2 0ms 0ms Aug 29 05 12 0ms 0ms 06 4 0ms 0ms 07 2 0ms 0ms 16 4 0ms 0ms Aug 30 00 1 0ms 0ms 06 6 0ms 0ms 07 12 0ms 0ms 08 3 0ms 0ms 11 6 0ms 0ms 13 3 0ms 0ms 15 6 0ms 0ms [ User: pubeu - Total duration: 2m33s - Times executed: 61 ]
[ User: qaeu - Total duration: 8s36ms - Times executed: 2 ]
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;
Date: Duration: 0ms Database: postgres User: ctdprd51 Remote: pubeu parameters: $1 = '1247051', $2 = '1247051'
-
Events
Log levels
Key values
- 137,453 Log entries
Events distribution
Key values
- 0 PANIC entries
- 9 FATAL entries
- 65 ERROR entries
- 1313 WARNING entries
Most Frequent Errors/Events
Key values
- 1,038 Max number of times the same event was reported
- 1,387 Total events found
Rank Times reported Error 1 1,038 WARNING: skipping "..." --- only table or database owner can vacuum it
Times Reported Most Frequent Error / Event #1
Day Hour Count Aug 28 03 1,038 2 224 WARNING: skipping "..." --- only superuser or database owner can vacuum it
Times Reported Most Frequent Error / Event #2
Day Hour Count Aug 28 03 224 3 43 WARNING: skipping "..." --- only superuser can vacuum it
Times Reported Most Frequent Error / Event #3
Day Hour Count Aug 28 03 43 4 31 LOG: could not receive data from client: Connection timed out
Times Reported Most Frequent Error / Event #4
Day Hour Count Aug 26 18 1 20 2 Aug 27 16 2 18 1 Aug 28 19 1 20 10 21 3 Aug 29 18 6 19 1 Aug 30 19 3 Aug 31 17 1 5 9 FATAL: connection to client lost
Times Reported Most Frequent Error / Event #5
Day Hour Count Aug 28 05 4 13 1 Aug 29 23 3 Aug 30 00 1 - FATAL: connection to client lost
Statement: select t.ID ,t.OBJECT_TYPE_ID ,t.ACC_TXT ,t.ACC_DB_CD ,t.NM ,t.NM_SORT ,t.SECONDARY_NM ,t.DESCRIPTION ,t.NOTE ,l.NM from pub1.TERM t ,pub1.TERM_LABEL l where t.OBJECT_TYPE_ID = 4 and t.id = l.TERM_ID
Date: 2024-08-28 13:58:32
6 8 LOG: could not send data to client: Broken pipe
Times Reported Most Frequent Error / Event #6
Day Hour Count Aug 28 05 4 Aug 29 23 3 Aug 30 00 1 7 8 ERROR: canceling statement due to user request
Times Reported Most Frequent Error / Event #7
Day Hour Count Aug 28 05 4 Aug 29 23 3 Aug 30 00 1 - ERROR: canceling statement due to user request
- ERROR: canceling statement due to user request
- ERROR: canceling statement due to user request
Statement: SELECT count(*) FROM pg_catalog.pg_stat_all_tables WHERE (n_dead_tup/(n_live_tup+n_dead_tup)::float8) > 0.2 AND (n_live_tup+n_dead_tup) > 50;
Date: 2024-08-28 05:43:29
Statement: SELECT row_to_json(T) FROM ( SELECT archived_count, failed_count FROM pg_stat_archiver ) T;
Date: 2024-08-28 05:43:29 Database: postgres Application: User: zbx_monitor Remote:
Statement: SELECT row_to_json (T) FROM ( SELECT checkpoints_timed , checkpoints_req , checkpoint_write_time , checkpoint_sync_time , buffers_checkpoint , buffers_clean , maxwritten_clean , buffers_backend , buffers_backend_fsync , buffers_alloc FROM pg_catalog.pg_stat_bgwriter ) T ;
Date: 2024-08-30 00:01:03
8 6 WARNING: there is no transaction in progress
Times Reported Most Frequent Error / Event #8
Day Hour Count Aug 28 03 2 06 4 - WARNING: there is no transaction in progress
Context: PL/pgSQL function maint_cached_value_refresh_data_metrics() line 17 at RAISESQL statement "INSERT INTO cached_value(type_nm, key_nm, value_num)
Statement: select pub2.maint_cached_value_refresh_data_metrics()Date: 2024-08-28 06:21:56
9 6 ERROR: invalid byte sequence for encoding
Times Reported Most Frequent Error / Event #9
Day Hour Count Aug 26 09 2 Aug 28 07 4 - ERROR: invalid byte sequence for encoding "UTF8": 0x00
- ERROR: invalid byte sequence for encoding "UTF8": 0x00
Context: unnamed portal parameter $1
Statement: SELECT /* ObjectIdDAOImpl.LabelsAndAccs */ t.id ,t.nm ,t.nm_sort nmSort ,t.acc_txt acc ,t.acc_db_cd accDbCd FROM term t ,(SELECT li.term_id FROM term_label li WHERE UPPER(li.nm) = $1 AND li.object_type_id = 2 UNION SELECT l.object_id FROM db_link l WHERE upper( l.acc_txt ) = $2 AND l.object_type_id = 2 AND l.type_cd = 'A') ids WHERE t.id = ids.term_id ORDER BY CASE WHEN UPPER(t.nm) = $3 THEN 1 ELSE 2 END ,t.nm_sortDate: 2024-08-26 09:49:54
Context: unnamed portal parameter $1
Statement: SELECT /* ObjectIdDAOImpl.LabelsAndAccs */ t.id ,t.nm ,t.nm_sort nmSort ,t.acc_txt acc ,t.acc_db_cd accDbCd FROM term t ,(SELECT li.term_id FROM term_label li WHERE UPPER(li.nm) = $1 AND li.object_type_id = 3 UNION SELECT l.object_id FROM db_link l WHERE upper( l.acc_txt ) = $2 AND l.object_type_id = 3 AND l.type_cd = 'A') ids WHERE t.id = ids.term_id ORDER BY CASE WHEN UPPER(t.nm) = $3 THEN 1 ELSE 2 END ,t.nm_sortDate: 2024-08-28 07:52:54 Database: ctdprd51 Application: User: pubeu Remote:
10 4 ERROR: relation "..." does not exist
Times Reported Most Frequent Error / Event #10
Day Hour Count Aug 26 14 1 Aug 28 10 1 11 1 16 1 - ERROR: relation "edit.xn_type" does not exist at character 15
- ERROR: relation "pub2reference" does not exist at character 510
- ERROR: relation "pubx.data_load" does not exist at character 15
Statement: select * from edit.xn_type limit 100 from pub1.reference r where exists ( select 1 from edit.reference_ixn ri ,edit.ixn i where ri.reference_acc_txt = r.acc_txt and ri.ixn_id = i.root_id and i.ixn_type_id = 1 -- C-G ) and exists ( select 1 from edit.reference_ixn ri ,edit.ixn i where ri.reference_acc_txt = r.acc_txt and ri.ixn_id = i.root_id and i.ixn_type_id = 2 -- C-D ) and exists ( select 1 from edit.reference_ixn ri ,edit.ixn i where ri.reference_acc_txt = r.acc_txt and ri.ixn_id = i.root_id and i.ixn_type_id = 3 -- G-D ) and exists ( select 1 from edit.reference_ixn ri ,edit.ixn i where ri.reference_acc_txt = r.acc_txt and ri.ixn_id = i.root_id and i.ixn_type_id = 4 -- P ) order by acc_txt -- and r.acc_txt = '30240538'
Date: 2024-08-26 14:40:12 Database: ctdprd51 Application: pgAdmin 4 - CONN:472802 User: load Remote:
Statement: select min( to_char ( create_tm, 'yyyymmdd' ) ), max(to_char ( create_tm, 'yyyymmdd' ))--reference_acc_txt, create_by, create_tm, sent_tm from reference_contact where reference_acc_txt in ( select acc_txt from pub2.db_link l where object_type_id = ( select id from object_type where cd = 'reference' ) AND l.type_cd = 'A' AND l.is_primary = true AND (SELECT r.has_ixns OR r.has_diseases or r.has_exposures -- !! CHANGE PUB SCHEMA QUALIFIER TO LIVE/QA SCHEMA !! FROM pub2reference r WHERE r.id = l.object_id) ) and sent_tm is null
Date: 2024-08-28 10:00:41
Statement: select * from pubX.data_load where db_id = 21
Date: 2024-08-28 11:06:26
11 2 ERROR: column "..." does not exist
Times Reported Most Frequent Error / Event #11
Day Hour Count Aug 28 10 1 Aug 30 10 1 - ERROR: column "mod_tm" does not exist at character 38
- ERROR: column "acc_txt" does not exist at character 44
Statement: select * from reference_exp where mod_tm > '2024-08-77' -- update the date to match the date of the load
Date: 2024-08-28 10:20:01 Database: ctdprd51 Application: pgAdmin 4 - CONN:1770209 User: pub2 Remote:
Statement: select * from edit.reference_contact where acc_txt = '39172838' limit 100
Date: 2024-08-30 10:01:43 Database: ctdprd51 Application: pgAdmin 4 - CONN:472802 User: load Remote:
12 2 LOG: could not receive data from client: Connection reset by peer
Times Reported Most Frequent Error / Event #12
Day Hour Count Aug 31 15 2 13 2 WARNING: is not a PostgreSQL server process
Times Reported Most Frequent Error / Event #13
Day Hour Count Aug 31 15 2 14 2 ERROR: duplicate key value violates unique constraint "..."
Times Reported Most Frequent Error / Event #14
Day Hour Count Aug 27 08 1 Aug 28 17 1 - ERROR: duplicate key value violates unique constraint "ixn_action_pk"
Detail: Key (ixn_id, action_type_id, action_degree_type_id)=(8713657, 1, 1) already exists.
Context: SQL statement "INSERT INTO edit.ixn_action (ixn_id ,action_type_id ,action_degree_type_id ,position_seq ,create_by ,mod_by ,create_tm ,mod_tm ) VALUES (p_ixn_id ,p_action_type_id ,p_action_degree_type_id ,p_position_seq ,p_create_by ,p_mod_by ,p_create_tm ,p_mod_tm )" PL/pgSQL function ins_ixn_action(integer,integer,integer,smallint,character varying,character varying,timestamp without time zone,timestamp without time zone) line 9 at SQL statementPL/pgSQL function del_ixn_by_root_id(integer) line 14 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 21 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 31 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 43 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 50 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 55 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 14 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 21 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 31 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 43 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 50 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 55 at RAISEPL/pgSQL function ins_ixn(integer,smallint,integer,character varying,character varying,integer,timestamp without time zone,timestamp without time zone) line 32 at RAISEPL/pgSQL function upd_ixn_root_id(integer,integer) line 14 at RAISEPL/pgSQL function ins_ixn_actor(integer,smallint,integer,character varying,integer,character varying,integer,integer,character varying,character varying,character varying,timestamp without time zone,timestamp without time zone) line 40 at RAISEPL/pgSQL function ins_ixn_action(integer,integer,integer,smallint,character varying,character varying,timestamp without time zone,timestamp without time zone) line 30 at RAISEPL/pgSQL function ins_ixn(integer,smallint,integer,character varying,character varying,integer,timestamp without time zone,timestamp without time zone) line 32 at RAISEPL/pgSQL function ins_ixn_actor(integer,smallint,integer,character varying,integer,character varying,integer,integer,character varying,character varying,character varying,timestamp without time zone,timestamp without time zone) line 40 at RAISEPL/pgSQL function ins_ixn_actor(integer,smallint,integer,character varying,integer,character varying,integer,integer,character varying,character varying,character varying,timestamp without time zone,timestamp without time zone) line 40 at RAISEPL/pgSQL function ins_ixn_actor(integer,smallint,integer,character varying,integer,character varying,integer,integer,character varying,character varying,character varying,timestamp without time zone,timestamp without time zone) line 40 at RAISEPL/pgSQL function ins_ixn_action(integer,integer,integer,smallint,character varying,character varying,timestamp without time zone,timestamp without time zone) line 30 at RAISEPL/pgSQL function ins_reference_ixn(character varying,integer,integer,character varying,integer,character varying,character varying,character varying,character varying,character varying,character varying,timestamp without time zone,timestamp without time zone) line 42 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 14 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 21 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 31 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 43 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 50 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 55 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 14 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 21 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 31 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 43 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 50 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 55 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 14 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 21 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 31 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 43 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 50 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 55 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 14 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 21 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 31 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 43 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 50 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 55 at RAISEPL/pgSQL function ins_ixn(integer,smallint,integer,character varying,character varying,integer,timestamp without time zone,timestamp without time zone) line 32 at RAISEPL/pgSQL function upd_ixn_root_id(integer,integer) line 14 at RAISEPL/pgSQL function ins_ixn_actor(integer,smallint,integer,character varying,integer,character varying,integer,integer,character varying,character varying,character varying,timestamp without time zone,timestamp without time zone) line 40 at RAISEPL/pgSQL function ins_ixn_action(integer,integer,integer,smallint,character varying,character varying,timestamp without time zone,timestamp without time zone) line 30 at RAISEPL/pgSQL function ins_ixn(integer,smallint,integer,character varying,character varying,integer,timestamp without time zone,timestamp without time zone) line 32 at RAISEPL/pgSQL function ins_ixn_actor(integer,smallint,integer,character varying,integer,character varying,integer,integer,character varying,character varying,character varying,timestamp without time zone,timestamp without time zone) line 40 at RAISEPL/pgSQL function ins_ixn_actor(integer,smallint,integer,character varying,integer,character varying,integer,integer,character varying,character varying,character varying,timestamp without time zone,timestamp without time zone) line 40 at RAISEPL/pgSQL function ins_ixn_actor(integer,smallint,integer,character varying,integer,character varying,integer,integer,character varying,character varying,character varying,timestamp without time zone,timestamp without time zone) line 40 at RAISEPL/pgSQL function ins_ixn_action(integer,integer,integer,smallint,character varying,character varying,timestamp without time zone,timestamp without time zone) line 30 at RAISEPL/pgSQL function ins_reference_ixn(character varying,integer,integer,character varying,integer,character varying,character varying,character varying,character varying,character varying,character varying,timestamp without time zone,timestamp without time zone) line 42 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 14 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 21 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 31 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 43 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 50 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 55 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 14 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 21 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 31 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 43 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 50 at RAISEPL/pgSQL function del_ixn_by_root_id(integer) line 55 at RAISE
Statement: select * from edit.ins_ixn_action($1, $2, $3, $4, $5, $6, $7, $8) as resultDate: 2024-08-27 08:28:09
15 1 ERROR: function get_ixn_prose(...) does not exist
Times Reported Most Frequent Error / Event #15
Day Hour Count Aug 27 14 1 - ERROR: function get_ixn_prose(integer) does not exist at character 66
Hint: No function matches the given name and argument types. You might need to add explicit type casts.
Statement: select reference_acc_txt ,taxon_acc_txt ,pubTerm.nm ,get_ixn_prose( ixn_id ) ,create_by ,create_tm from edit.reference_ixn ri ,pub2.term pubTerm where taxon_acc_txt not in ( select acc_txt from load.term where object_type_id = ( select id from edit.object_type where cd = 'taxon' ) ) and pubTerm.acc_txt = ri.taxon_acc_txt and object_type_id = ( select id from edit.object_type where cd = 'taxon' ) and taxon_acc_txt is not null and taxon_acc_txt <> ''Date: 2024-08-27 14:21:04
16 1 LOG: could not send data to client: Connection reset by peer
Times Reported Most Frequent Error / Event #16
Day Hour Count Aug 28 13 1 - ERROR: could not send data to client: Connection reset by peer
Statement: select t.ID ,t.OBJECT_TYPE_ID ,t.ACC_TXT ,t.ACC_DB_CD ,t.NM ,t.NM_SORT ,t.SECONDARY_NM ,t.DESCRIPTION ,t.NOTE ,l.NM from pub1.TERM t ,pub1.TERM_LABEL l where t.OBJECT_TYPE_ID = 4 and t.id = l.TERM_ID
Date: 2024-08-28 13:58:32 Database: ctdprd51 Application: User: editeu Remote: