pgBadger-
Global information
- Generated on Sun Oct 13 04:15:16 2024
- Log file: /project/archive/log/postgres/dbprd51/postgresql.log-20241012
- Parsed 192,784 log entries in 14s
- Log start from 2024-10-06 00:00:01 to 2024-10-12 23:58:59
-
Overview
Global Stats
- 513 Number of unique normalized queries
- 9,418 Number of queries
- 15h18m30s Total query duration
- 2024-10-06 00:00:50 First query
- 2024-10-12 23:58:12 Last query
- 4 queries/s at 2024-10-08 10:16:56 Query peak
- 15h18m30s Total query duration
- 0ms Prepare/parse total duration
- 0ms Bind total duration
- 15h18m30s Execute total duration
- 22 Number of events
- 3 Number of unique normalized events
- 16 Max number of times the same event was reported
- 0 Number of cancellation
- 46 Total number of automatic vacuums
- 191 Total number of automatic analyzes
- 6 Number temporary file
- 1.00 GiB Max size of temporary file
- 999.72 MiB Average size of temporary file
- 17,632 Total number of sessions
- 53 sessions at 2024-10-08 10:20:46 Session peak
- 280d6h36m43s Total duration of sessions
- 22m53s Average duration of sessions
- 0 Average queries per session
- 3s125ms Average queries duration per session
- 22m50s Average idle time per session
- 17,632 Total number of connections
- 46 connections/s at 2024-10-08 10:18:45 Connection peak
- 2 Total number of databases
SQL Traffic
Key values
- 4 queries/s Query Peak
- 2024-10-08 10:16:56 Date
SELECT Traffic
Key values
- 4 queries/s Query Peak
- 2024-10-08 10:16:56 Date
INSERT/UPDATE/DELETE Traffic
Key values
- 1 queries/s Query Peak
- 2024-10-12 18:36:10 Date
Queries duration
Key values
- 15h18m30s Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Oct 06 00 47 0ms 16m57s 24s41ms 8s62ms 9s227ms 16m57s 01 53 0ms 17s275ms 3s231ms 6s372ms 15s952ms 36s452ms 02 28 0ms 5s309ms 2s89ms 3s922ms 4s29ms 5s309ms 03 34 0ms 5s104ms 1s403ms 2s777ms 3s716ms 7s857ms 04 38 0ms 17s615ms 2s306ms 4s633ms 5s897ms 17s689ms 05 68 0ms 12s668ms 2s808ms 15s227ms 28s634ms 43s453ms 06 43 0ms 34s272ms 3s665ms 4s28ms 25s662ms 44s918ms 07 30 0ms 8s939ms 2s710ms 3s519ms 8s669ms 34s877ms 08 41 0ms 18s593ms 2s96ms 5s123ms 6s980ms 18s593ms 09 32 0ms 3s789ms 1s423ms 2s552ms 2s837ms 5s200ms 10 39 0ms 34s353ms 3s947ms 2s823ms 9s661ms 55s955ms 11 30 0ms 3m59s 11s786ms 5s613ms 22s51ms 4m1s 12 22 0ms 1m5s 4s385ms 2s593ms 3s498ms 1m5s 13 32 0ms 4s158ms 2s319ms 5s51ms 5s439ms 6s124ms 14 67 0ms 34s354ms 3s822ms 7s783ms 27s795ms 58s36ms 15 49 0ms 30s742ms 3s314ms 7s530ms 12s11ms 30s742ms 16 35 0ms 20s959ms 2s70ms 3s831ms 4s30ms 24s421ms 17 30 0ms 6s691ms 1s897ms 3s932ms 3s999ms 7s719ms 18 39 0ms 34s238ms 4s188ms 3s939ms 13s795ms 54s465ms 19 32 0ms 3s905ms 1s543ms 3s45ms 3s905ms 5s247ms 20 44 0ms 4s133ms 1s828ms 4s51ms 7s786ms 13s367ms 21 41 0ms 7s385ms 2s437ms 6s602ms 7s385ms 8s51ms 22 37 0ms 7s167ms 1s684ms 3s924ms 5s411ms 7s167ms 23 22 0ms 3s882ms 1s461ms 1s714ms 3s882ms 4s690ms Oct 07 00 40 0ms 16m59s 27s92ms 4s36ms 6s347ms 17m4s 01 35 0ms 10s260ms 2s721ms 4s260ms 5s260ms 43s245ms 02 29 0ms 5s239ms 1s683ms 2s579ms 4s186ms 5s686ms 03 46 0ms 5s338ms 1s639ms 3s516ms 5s872ms 15s542ms 04 45 0ms 7s631ms 1s557ms 4s359ms 7s879ms 10s281ms 05 76 0ms 6s632ms 2s144ms 8s58ms 13s774ms 29s824ms 06 42 0ms 34s284ms 3s558ms 2s556ms 11s916ms 54s612ms 07 27 0ms 5s409ms 1s580ms 2s190ms 3s744ms 5s409ms 08 38 0ms 3s899ms 1s441ms 3s850ms 3s899ms 6s193ms 09 38 0ms 6s578ms 2s288ms 5s357ms 9s493ms 12s767ms 10 50 0ms 34s170ms 3s704ms 10s624ms 23s833ms 42s438ms 11 18 0ms 22s426ms 2s470ms 1s415ms 2s817ms 22s426ms 12 32 0ms 23s29ms 6s478ms 3s805ms 17s365ms 2m16s 13 201 0ms 14s512ms 5s544ms 34s152ms 36s143ms 1m3s 14 284 1s23ms 34s292ms 5s932ms 36s227ms 45s585ms 1m14s 15 123 0ms 1m7s 5s239ms 37s261ms 58s779ms 1m19s 16 156 0ms 1m57s 11s25ms 59s402ms 1m11s 2m28s 17 95 0ms 2m13s 19s997ms 1m43s 2m23s 3m6s 18 159 0ms 1m37s 11s612ms 49s24ms 1m5s 1m45s 19 157 0ms 16s780ms 3s470ms 29s581ms 33s126ms 36s322ms 20 100 0ms 8s757ms 1s504ms 18s774ms 18s975ms 19s204ms 21 42 0ms 7s436ms 1s922ms 6s554ms 8s668ms 13s579ms 22 53 0ms 6s453ms 1s884ms 6s278ms 7s6ms 24s864ms 23 48 0ms 3m46s 7s528ms 6s737ms 15s293ms 3m46s Oct 08 00 38 0ms 17m10s 29s791ms 5s60ms 10s679ms 17m16s 01 27 0ms 5s352ms 2s349ms 2s821ms 5s263ms 22s587ms 02 30 0ms 11s455ms 2s929ms 3s987ms 5s421ms 34s258ms 03 40 0ms 7s680ms 1s908ms 5s815ms 6s682ms 7s680ms 04 34 0ms 3m22s 8s117ms 4s726ms 5s34ms 3m22s 05 54 0ms 6s670ms 2s278ms 10s59ms 15s200ms 28s882ms 06 35 0ms 34s221ms 4s912ms 8s140ms 27s828ms 42s515ms 07 46 0ms 7s238ms 1s927ms 4s579ms 7s918ms 9s641ms 08 22 0ms 11s97ms 1s892ms 3s316ms 4s78ms 11s97ms 09 38 0ms 10s579ms 1s921ms 3s761ms 6s337ms 13s488ms 10 131 0ms 35s157ms 4s 40s26ms 42s688ms 53s71ms 11 29 0ms 4m15s 17s318ms 30s113ms 1m2s 4m15s 12 33 0ms 5s403ms 1s803ms 3s640ms 3s925ms 7s229ms 13 34 0ms 26s853ms 2s537ms 5s344ms 7s476ms 26s853ms 14 40 0ms 34s549ms 4s898ms 5s741ms 23s849ms 1m13s 15 22 0ms 1s532ms 1s322ms 1s532ms 2s722ms 3s682ms 16 51 0ms 4s149ms 1s552ms 4s38ms 5s76ms 13s33ms 17 47 0ms 30s815ms 4s136ms 10s924ms 14s570ms 32s286ms 18 42 0ms 34s204ms 3s166ms 4s19ms 20s832ms 36s815ms 19 31 0ms 4s81ms 1s974ms 3s931ms 4s34ms 4s81ms 20 39 0ms 9s88ms 3s202ms 5s304ms 9s158ms 43s849ms 21 60 0ms 6s81ms 1s694ms 6s980ms 7s98ms 20s793ms 22 72 0ms 7s218ms 3s605ms 7s424ms 28s745ms 45s666ms 23 41 0ms 6s604ms 1s473ms 3s911ms 7s956ms 8s454ms Oct 09 00 103 0ms 16m58s 11s276ms 6s499ms 12s898ms 17m24s 01 42 0ms 4s484ms 2s359ms 4s61ms 7s665ms 11s703ms 02 31 0ms 3s997ms 1s588ms 2s908ms 6s944ms 7s120ms 03 31 0ms 2m38s 7s121ms 6s639ms 10s759ms 2m41s 04 34 0ms 15s169ms 5s193ms 15s169ms 21s738ms 1m9s 05 79 0ms 6s675ms 2s440ms 11s639ms 15s308ms 28s121ms 06 49 0ms 34s332ms 5s702ms 10s63ms 51s160ms 1m38s 07 47 0ms 9s463ms 2s919ms 9s463ms 17s606ms 26s870ms 08 215 0ms 4m20s 9s737ms 1m13s 1m41s 5m 09 313 1s9ms 3m39s 6s155ms 39s127ms 45s505ms 5m10s 10 269 1s18ms 34s336ms 6s63ms 38s738ms 41s161ms 1m12s 11 259 0ms 14s492ms 5s967ms 35s16ms 36s59ms 48s235ms 12 114 0ms 1m8s 8s535ms 54s710ms 58s863ms 1m10s 13 185 0ms 2m18s 10s923ms 1m2s 2m16s 2m57s 14 185 0ms 1m56s 9s731ms 49s151ms 1m44s 2m24s 15 186 0ms 57s33ms 9s919ms 57s33ms 1m4s 1m20s 16 79 0ms 12s412ms 2s977ms 25s953ms 29s881ms 36s475ms 17 30 0ms 7s174ms 1s873ms 3s924ms 3s966ms 8s570ms 18 31 0ms 34s188ms 4s388ms 3s251ms 9s605ms 54s640ms 19 29 0ms 5s470ms 1s868ms 3s874ms 6s521ms 8s488ms 20 38 0ms 5s348ms 1s648ms 2s822ms 5s299ms 9s143ms 21 64 0ms 5s485ms 1s540ms 4s229ms 6s612ms 14s457ms 22 45 0ms 11s757ms 1s737ms 3s673ms 4s235ms 11s757ms 23 32 0ms 5s374ms 1s797ms 3s965ms 6s375ms 7s122ms Oct 10 00 49 0ms 16m59s 22s587ms 6s535ms 10s282ms 17m4s 01 61 0ms 5s85ms 1s770ms 8s595ms 10s249ms 12s928ms 02 48 0ms 4s177ms 1s628ms 7s79ms 8s668ms 8s785ms 03 31 0ms 5s317ms 1s819ms 5s162ms 5s317ms 7s95ms 04 58 0ms 48s953ms 2s306ms 5s573ms 8s543ms 54s432ms 05 71 0ms 12s339ms 2s856ms 15s359ms 18s820ms 31s845ms 06 47 0ms 34s677ms 5s590ms 26s520ms 43s57ms 44s969ms 07 42 0ms 7s352ms 2s965ms 5s257ms 12s28ms 45s676ms 08 78 0ms 16s565ms 2s648ms 16s565ms 18s234ms 28s108ms 09 40 0ms 3m39s 6s944ms 4s386ms 5s65ms 3m39s 10 47 0ms 35s537ms 4s472ms 8s476ms 37s664ms 42s875ms 11 39 0ms 5s94ms 2s175ms 5s86ms 5s695ms 10s160ms 12 52 0ms 10s467ms 2s343ms 7s126ms 9s266ms 37s25ms 13 32 0ms 5s328ms 1s984ms 5s153ms 5s328ms 7s901ms 14 43 0ms 34s381ms 5s388ms 20s711ms 26s83ms 42s727ms 15 22 0ms 5s328ms 1s668ms 2s244ms 2s564ms 7s862ms 16 27 0ms 12s47ms 1s706ms 2s462ms 4s191ms 12s47ms 17 24 0ms 3s988ms 1s412ms 1s798ms 3s484ms 5s794ms 18 35 0ms 34s286ms 4s275ms 4s276ms 28s363ms 44s404ms 19 37 0ms 17s14ms 2s384ms 5s488ms 6s560ms 17s14ms 20 10 0ms 14s189ms 2s636ms 1s419ms 1s853ms 14s189ms 21 23 0ms 4s15ms 1s673ms 3s838ms 4s15ms 4s96ms 22 34 0ms 1m23s 3s886ms 3s834ms 4s382ms 1m24s 23 24 0ms 3m39s 10s497ms 2s596ms 2s810ms 3m39s Oct 11 00 37 0ms 16m58s 29s559ms 4s446ms 5s326ms 17m5s 01 24 0ms 10s467ms 2s72ms 4s32ms 4s555ms 11s604ms 02 38 0ms 5s151ms 1s613ms 3s985ms 6s256ms 10s720ms 03 29 0ms 17s385ms 2s836ms 4s94ms 7s962ms 17s385ms 04 54 0ms 6s26ms 1s621ms 6s380ms 7s296ms 10s291ms 05 76 0ms 14s855ms 2s407ms 15s84ms 16s538ms 33s549ms 06 56 0ms 34s321ms 3s840ms 6s581ms 40s763ms 43s721ms 07 30 0ms 33s383ms 4s133ms 5s131ms 8s301ms 35s36ms 08 30 0ms 16s93ms 3s295ms 5s550ms 15s483ms 16s93ms 09 24 0ms 12s398ms 2s651ms 4s510ms 5s837ms 24s794ms 10 80 0ms 10m46s 14s280ms 30s630ms 40s556ms 10m46s 11 29 0ms 5s185ms 1s777ms 4s84ms 5s185ms 10s214ms 12 56 0ms 10s462ms 1s850ms 7s85ms 9s422ms 20s60ms 13 44 0ms 19s318ms 3s162ms 7s999ms 15s393ms 41s66ms 14 55 0ms 34s399ms 4s634ms 17s336ms 25s63ms 44s393ms 15 38 0ms 17s577ms 2s529ms 5s257ms 9s134ms 18s720ms 16 34 0ms 15s788ms 3s843ms 10s383ms 15s581ms 28s108ms 17 28 0ms 6s332ms 1s895ms 3s870ms 5s413ms 8s791ms 18 55 0ms 34s329ms 3s411ms 6s429ms 23s718ms 48s604ms 19 37 0ms 16s379ms 2s68ms 3s769ms 7s683ms 16s379ms 20 57 0ms 4s586ms 1s352ms 4s586ms 6s969ms 8s156ms 21 55 0ms 16s590ms 1s841ms 5s677ms 9s559ms 17s700ms 22 25 0ms 2s80ms 1s361ms 2s80ms 2s478ms 3s879ms 23 22 0ms 3m38s 14s327ms 2s794ms 17s279ms 3m38s Oct 12 00 42 0ms 17m1s 26s646ms 5s873ms 16s539ms 17m6s 01 35 0ms 17s212ms 3s456ms 6s311ms 16s765ms 42s719ms 02 26 0ms 2s971ms 1s373ms 2s289ms 2s442ms 4s208ms 03 40 0ms 5s318ms 1s679ms 5s362ms 6s623ms 10s267ms 04 38 0ms 15s378ms 2s76ms 4s799ms 7s309ms 15s378ms 05 71 0ms 10s238ms 2s345ms 10s238ms 17s654ms 30s624ms 06 29 0ms 5s472ms 1s516ms 2s432ms 2s795ms 5s472ms 07 46 0ms 17s516ms 3s15ms 6s394ms 16s804ms 17s516ms 08 47 0ms 11s348ms 1s857ms 4s40ms 5s141ms 11s348ms 09 43 0ms 3m39s 6s661ms 4s55ms 6s331ms 3m41s 10 35 0ms 6s331ms 1s672ms 3s706ms 4s811ms 6s331ms 11 36 0ms 11s743ms 1s780ms 3s304ms 4s705ms 13s155ms 12 40 0ms 5s262ms 1s736ms 3s912ms 6s297ms 6s856ms 13 48 0ms 8s951ms 2s403ms 5s546ms 7s725ms 43s163ms 14 39 0ms 17s649ms 3s72ms 7s360ms 15s42ms 18s916ms 15 25 0ms 5s81ms 1s583ms 2s511ms 4s693ms 7s302ms 16 29 0ms 5s573ms 1s704ms 3s680ms 4s669ms 13s303ms 17 49 0ms 5s217ms 1s611ms 5s217ms 8s521ms 11s256ms 18 70 0ms 1m11s 7s553ms 55s897ms 1m2s 1m11s 19 85 0ms 23m44s 58s18ms 2m14s 7m20s 24m14s 20 31 0ms 16s899ms 2s374ms 4s421ms 5s692ms 18s311ms 21 66 0ms 5s292ms 1s671ms 6s555ms 7s114ms 13s576ms 22 35 0ms 16s643ms 2s200ms 2s637ms 6s491ms 16s643ms 23 33 0ms 5s281ms 1s572ms 3s769ms 5s955ms 6s677ms Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Oct 06 00 46 0 24s453ms 4s28ms 7s38ms 16m57s 01 53 0 3s231ms 4s249ms 6s372ms 36s452ms 02 28 0 2s89ms 3s856ms 3s922ms 5s309ms 03 34 0 1s403ms 1s414ms 2s777ms 7s857ms 04 37 0 2s317ms 1s750ms 4s633ms 17s689ms 05 63 0 2s874ms 2s757ms 15s227ms 43s453ms 06 33 10 3s665ms 1s421ms 4s28ms 41s203ms 07 30 0 2s710ms 1s381ms 3s519ms 34s877ms 08 41 0 2s96ms 2s661ms 5s123ms 18s593ms 09 32 0 1s423ms 1s420ms 2s552ms 5s200ms 10 29 10 3s947ms 2s324ms 2s823ms 42s652ms 11 30 0 11s786ms 1s400ms 5s613ms 22s99ms 12 22 0 4s385ms 1s334ms 2s593ms 3s820ms 13 32 0 2s319ms 3s943ms 5s51ms 6s124ms 14 57 10 3s822ms 6s874ms 9s734ms 40s551ms 15 49 0 3s314ms 4s16ms 7s530ms 30s742ms 16 35 0 2s70ms 2s452ms 3s831ms 24s421ms 17 30 0 1s897ms 1s415ms 3s932ms 7s719ms 18 29 10 4s188ms 2s821ms 4s159ms 42s518ms 19 32 0 1s543ms 1s541ms 3s45ms 5s247ms 20 44 0 1s828ms 2s369ms 4s51ms 8s49ms 21 41 0 2s437ms 4s160ms 6s602ms 8s51ms 22 37 0 1s684ms 2s592ms 3s924ms 7s167ms 23 22 0 1s461ms 1s408ms 1s714ms 4s690ms Oct 07 00 38 0 28s333ms 2s432ms 4s36ms 16m59s 01 35 0 2s721ms 1s423ms 4s260ms 43s245ms 02 29 0 1s683ms 1s420ms 2s579ms 5s686ms 03 46 0 1s639ms 2s524ms 3s516ms 7s849ms 04 45 0 1s557ms 2s523ms 4s359ms 10s281ms 05 72 0 2s141ms 3s858ms 7s660ms 28s463ms 06 32 10 3s558ms 2s266ms 2s556ms 42s619ms 07 27 0 1s580ms 1s408ms 2s190ms 3s941ms 08 38 0 1s441ms 2s163ms 3s850ms 6s193ms 09 38 0 2s288ms 3s193ms 5s357ms 12s767ms 10 40 10 3s704ms 5s702ms 10s624ms 42s438ms 11 18 0 2s470ms 1s400ms 1s415ms 22s426ms 12 32 0 6s478ms 2s541ms 3s805ms 2m16s 13 201 0 5s544ms 30s769ms 34s152ms 45s431ms 14 276 8 5s932ms 31s898ms 34s786ms 38s667ms 15 123 0 5s239ms 24s60ms 37s261ms 1m7s 16 154 0 11s150ms 42s934ms 59s402ms 1m19s 17 95 0 19s997ms 38s587ms 1m43s 2m59s 18 149 10 11s612ms 42s594ms 48s84ms 1m7s 19 157 0 3s470ms 27s638ms 29s581ms 36s322ms 20 100 0 1s504ms 5s625ms 18s774ms 19s204ms 21 42 0 1s922ms 2s254ms 6s554ms 13s579ms 22 53 0 1s884ms 2s711ms 6s278ms 24s864ms 23 48 0 7s528ms 4s268ms 6s737ms 29s402ms Oct 08 00 37 0 30s462ms 3s441ms 5s60ms 17m11s 01 27 0 2s349ms 1s404ms 2s821ms 22s587ms 02 30 0 2s929ms 1s426ms 3s987ms 34s258ms 03 40 0 1s908ms 2s664ms 5s815ms 7s680ms 04 34 0 8s117ms 3s782ms 4s726ms 3m22s 05 50 0 2s284ms 1s950ms 10s59ms 28s882ms 06 25 10 4s912ms 4s213ms 8s140ms 42s515ms 07 46 0 1s927ms 2s568ms 4s579ms 9s159ms 08 22 0 1s892ms 1s414ms 3s316ms 11s97ms 09 38 0 1s921ms 2s831ms 3s761ms 13s488ms 10 121 10 4s 19s860ms 40s26ms 43s865ms 11 29 0 17s318ms 2s555ms 30s113ms 4m15s 12 33 0 1s803ms 2s317ms 3s640ms 7s229ms 13 34 0 2s537ms 1s524ms 5s344ms 26s853ms 14 30 10 4s898ms 3s470ms 17s600ms 42s898ms 15 22 0 1s322ms 1s413ms 1s532ms 3s682ms 16 50 0 1s518ms 2s590ms 3s919ms 5s705ms 17 47 0 4s136ms 4s872ms 10s924ms 21s880ms 18 36 6 3s166ms 2s691ms 4s80ms 34s204ms 19 31 0 1s974ms 2s690ms 3s931ms 4s81ms 20 39 0 3s202ms 3s907ms 5s304ms 43s849ms 21 60 0 1s694ms 2s938ms 6s980ms 20s793ms 22 72 0 3s605ms 5s453ms 7s424ms 39s281ms 23 41 0 1s473ms 2s657ms 3s911ms 8s454ms Oct 09 00 101 0 11s429ms 3s538ms 6s499ms 17m19s 01 42 0 2s359ms 3s996ms 4s61ms 11s703ms 02 31 0 1s588ms 1s657ms 2s908ms 7s120ms 03 30 0 7s295ms 1s417ms 6s639ms 2m41s 04 34 0 5s193ms 4s95ms 15s169ms 1m9s 05 75 0 2s454ms 7s728ms 11s639ms 28s121ms 06 39 10 5s702ms 1s437ms 15s247ms 42s704ms 07 47 0 2s919ms 2s549ms 9s463ms 18s42ms 08 215 0 9s737ms 38s281ms 1m13s 1m56s 09 313 0 6s155ms 33s15ms 39s127ms 48s769ms 10 261 8 6s63ms 36s104ms 38s738ms 41s161ms 11 259 0 5s967ms 34s129ms 35s16ms 40s885ms 12 112 0 8s647ms 31s704ms 54s710ms 59s26ms 13 183 0 11s27ms 42s241ms 1m2s 2m28s 14 175 10 9s731ms 40s488ms 48s116ms 1m58s 15 186 0 9s919ms 46s974ms 57s33ms 1m5s 16 79 0 2s977ms 4s123ms 25s953ms 36s475ms 17 30 0 1s873ms 2s812ms 3s924ms 8s570ms 18 21 10 4s388ms 2s224ms 3s251ms 54s640ms 19 29 0 1s868ms 1s422ms 3s874ms 8s488ms 20 38 0 1s648ms 1s417ms 2s822ms 7s895ms 21 64 0 1s540ms 2s831ms 4s229ms 6s629ms 22 45 0 1s737ms 2s547ms 3s673ms 5s152ms 23 32 0 1s797ms 2s278ms 3s965ms 7s122ms Oct 10 00 48 0 22s951ms 2s417ms 6s535ms 10s303ms 01 61 0 1s770ms 3s159ms 8s595ms 12s928ms 02 48 0 1s628ms 3s572ms 7s79ms 8s785ms 03 31 0 1s819ms 2s458ms 5s162ms 7s95ms 04 58 0 2s306ms 2s574ms 5s573ms 9s34ms 05 68 0 2s869ms 7s116ms 15s359ms 31s845ms 06 37 10 5s590ms 2s770ms 23s750ms 44s969ms 07 42 0 2s965ms 2s632ms 5s257ms 45s676ms 08 78 0 2s648ms 5s320ms 16s565ms 27s15ms 09 40 0 6s944ms 2s599ms 4s386ms 3m39s 10 36 10 4s527ms 2s722ms 8s476ms 40s562ms 11 39 0 2s175ms 3s510ms 5s86ms 6s957ms 12 52 0 2s343ms 4s64ms 7s126ms 37s25ms 13 32 0 1s984ms 3s939ms 5s153ms 7s901ms 14 33 10 5s388ms 5s93ms 20s711ms 42s727ms 15 22 0 1s668ms 1s405ms 2s244ms 6s481ms 16 27 0 1s706ms 1s415ms 2s462ms 5s720ms 17 24 0 1s412ms 1s410ms 1s798ms 5s794ms 18 25 10 4s275ms 2s266ms 4s365ms 42s619ms 19 37 0 2s384ms 3s848ms 5s488ms 17s14ms 20 10 0 2s636ms 1s164ms 1s419ms 14s189ms 21 23 0 1s673ms 1s996ms 3s838ms 4s96ms 22 34 0 3s886ms 2s300ms 3s834ms 1m24s 23 24 0 10s497ms 1s414ms 2s596ms 3m39s Oct 11 00 36 0 30s237ms 2s223ms 4s446ms 12s706ms 01 24 0 2s72ms 2s285ms 4s32ms 11s604ms 02 38 0 1s613ms 1s554ms 3s985ms 10s720ms 03 29 0 2s836ms 2s647ms 4s94ms 17s385ms 04 54 0 1s621ms 2s822ms 6s380ms 7s974ms 05 72 0 2s419ms 3s598ms 15s84ms 33s549ms 06 46 10 3s840ms 4s35ms 7s914ms 40s763ms 07 30 0 4s133ms 1s711ms 5s131ms 33s383ms 08 30 0 3s295ms 3s869ms 5s550ms 16s93ms 09 24 0 2s651ms 1s405ms 4s510ms 24s794ms 10 70 10 14s280ms 20s861ms 30s630ms 42s611ms 11 29 0 1s777ms 1s484ms 4s84ms 10s214ms 12 56 0 1s850ms 3s810ms 7s85ms 20s60ms 13 44 0 3s162ms 2s815ms 7s999ms 19s318ms 14 45 10 4s634ms 5s243ms 17s336ms 42s816ms 15 38 0 2s529ms 2s812ms 5s257ms 18s720ms 16 34 0 3s843ms 2s757ms 10s383ms 28s108ms 17 28 0 1s895ms 1s601ms 3s870ms 8s791ms 18 45 10 3s411ms 3s103ms 6s991ms 41s612ms 19 37 0 2s68ms 2s185ms 3s769ms 16s379ms 20 57 0 1s352ms 2s539ms 4s586ms 8s156ms 21 55 0 1s841ms 2s617ms 5s677ms 17s700ms 22 25 0 1s361ms 1s396ms 2s80ms 3s879ms 23 22 0 14s327ms 1s422ms 2s794ms 3m38s Oct 12 00 41 0 27s171ms 1s610ms 5s873ms 17m1s 01 35 0 3s456ms 2s292ms 6s311ms 42s719ms 02 26 0 1s373ms 1s409ms 2s289ms 4s208ms 03 40 0 1s679ms 2s296ms 5s362ms 10s267ms 04 37 0 2s80ms 2s324ms 4s799ms 15s378ms 05 67 0 2s355ms 2s953ms 10s238ms 30s624ms 06 29 0 1s516ms 1s401ms 2s432ms 4s818ms 07 46 0 3s15ms 3s623ms 6s394ms 17s162ms 08 47 0 1s857ms 2s591ms 4s40ms 10s642ms 09 43 0 6s661ms 2s807ms 4s55ms 9s7ms 10 35 0 1s672ms 2s271ms 3s706ms 5s333ms 11 36 0 1s780ms 2s299ms 3s304ms 13s155ms 12 40 0 1s736ms 2s700ms 3s912ms 6s396ms 13 48 0 2s403ms 2s320ms 5s546ms 12s111ms 14 39 0 3s72ms 3s853ms 7s360ms 18s916ms 15 25 0 1s583ms 1s409ms 2s511ms 7s302ms 16 29 0 1s704ms 1s410ms 3s680ms 13s303ms 17 49 0 1s611ms 2s809ms 5s217ms 11s256ms 18 44 25 7s636ms 14s513ms 54s479ms 1m11s 19 38 47 58s18ms 1m10s 2m14s 24m14s 20 31 0 2s374ms 1s484ms 4s421ms 18s311ms 21 66 0 1s671ms 3s622ms 6s555ms 11s174ms 22 35 0 2s200ms 2s394ms 2s637ms 16s643ms 23 33 0 1s572ms 1s418ms 3s769ms 6s677ms Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Oct 06 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Oct 07 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Oct 08 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Oct 09 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Oct 10 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Oct 11 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Oct 12 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare Oct 06 00 0 45 45.00 0.00% 01 0 53 53.00 0.00% 02 0 28 28.00 0.00% 03 0 34 34.00 0.00% 04 0 38 38.00 0.00% 05 0 68 68.00 0.00% 06 0 33 33.00 0.00% 07 0 30 30.00 0.00% 08 0 41 41.00 0.00% 09 0 32 32.00 0.00% 10 0 29 29.00 0.00% 11 0 30 30.00 0.00% 12 0 26 26.00 0.00% 13 0 33 33.00 0.00% 14 0 57 57.00 0.00% 15 0 49 49.00 0.00% 16 0 35 35.00 0.00% 17 0 30 30.00 0.00% 18 0 29 29.00 0.00% 19 0 32 32.00 0.00% 20 0 44 44.00 0.00% 21 0 41 41.00 0.00% 22 0 37 37.00 0.00% 23 0 22 22.00 0.00% Oct 07 00 0 38 38.00 0.00% 01 0 35 35.00 0.00% 02 0 29 29.00 0.00% 03 0 46 46.00 0.00% 04 0 45 45.00 0.00% 05 0 77 77.00 0.00% 06 0 36 36.00 0.00% 07 0 35 35.00 0.00% 08 0 41 41.00 0.00% 09 0 38 38.00 0.00% 10 0 40 40.00 0.00% 11 0 18 18.00 0.00% 12 0 32 32.00 0.00% 13 0 212 212.00 0.00% 14 0 299 299.00 0.00% 15 0 129 129.00 0.00% 16 0 181 181.00 0.00% 17 0 109 109.00 0.00% 18 0 149 149.00 0.00% 19 0 157 157.00 0.00% 20 0 100 100.00 0.00% 21 0 42 42.00 0.00% 22 0 53 53.00 0.00% 23 0 48 48.00 0.00% Oct 08 00 0 36 36.00 0.00% 01 0 27 27.00 0.00% 02 0 30 30.00 0.00% 03 0 40 40.00 0.00% 04 0 34 34.00 0.00% 05 0 54 54.00 0.00% 06 0 25 25.00 0.00% 07 0 47 47.00 0.00% 08 0 23 23.00 0.00% 09 0 38 38.00 0.00% 10 0 122 122.00 0.00% 11 0 29 29.00 0.00% 12 0 33 33.00 0.00% 13 0 34 34.00 0.00% 14 0 36 36.00 0.00% 15 0 22 22.00 0.00% 16 0 63 63.00 0.00% 17 0 50 50.00 0.00% 18 0 44 44.00 0.00% 19 0 31 31.00 0.00% 20 0 39 39.00 0.00% 21 0 60 60.00 0.00% 22 0 72 72.00 0.00% 23 0 41 41.00 0.00% Oct 09 00 0 104 104.00 0.00% 01 0 42 42.00 0.00% 02 0 31 31.00 0.00% 03 0 31 31.00 0.00% 04 0 34 34.00 0.00% 05 0 79 79.00 0.00% 06 0 54 54.00 0.00% 07 0 53 53.00 0.00% 08 0 221 221.00 0.00% 09 0 336 336.00 0.00% 10 0 283 283.00 0.00% 11 0 259 259.00 0.00% 12 0 114 114.00 0.00% 13 0 185 185.00 0.00% 14 0 187 187.00 0.00% 15 0 187 187.00 0.00% 16 0 79 79.00 0.00% 17 0 30 30.00 0.00% 18 0 21 21.00 0.00% 19 0 29 29.00 0.00% 20 0 38 38.00 0.00% 21 0 64 64.00 0.00% 22 0 45 45.00 0.00% 23 0 32 32.00 0.00% Oct 10 00 0 47 47.00 0.00% 01 0 61 61.00 0.00% 02 0 48 48.00 0.00% 03 0 31 31.00 0.00% 04 0 58 58.00 0.00% 05 0 71 71.00 0.00% 06 0 40 40.00 0.00% 07 0 45 45.00 0.00% 08 0 81 81.00 0.00% 09 0 40 40.00 0.00% 10 0 37 37.00 0.00% 11 0 39 39.00 0.00% 12 0 52 52.00 0.00% 13 0 34 34.00 0.00% 14 0 33 33.00 0.00% 15 0 22 22.00 0.00% 16 0 35 35.00 0.00% 17 0 26 26.00 0.00% 18 0 25 25.00 0.00% 19 0 37 37.00 0.00% 20 0 10 10.00 0.00% 21 0 23 23.00 0.00% 22 0 34 34.00 0.00% 23 0 24 24.00 0.00% Oct 11 00 0 35 35.00 0.00% 01 0 24 24.00 0.00% 02 0 38 38.00 0.00% 03 0 29 29.00 0.00% 04 0 54 54.00 0.00% 05 0 76 76.00 0.00% 06 0 50 50.00 0.00% 07 0 35 35.00 0.00% 08 0 33 33.00 0.00% 09 0 28 28.00 0.00% 10 0 72 72.00 0.00% 11 0 29 29.00 0.00% 12 0 57 57.00 0.00% 13 0 52 52.00 0.00% 14 0 45 45.00 0.00% 15 0 39 39.00 0.00% 16 0 34 34.00 0.00% 17 0 28 28.00 0.00% 18 0 45 45.00 0.00% 19 0 37 37.00 0.00% 20 0 57 57.00 0.00% 21 0 55 55.00 0.00% 22 0 25 25.00 0.00% 23 0 22 22.00 0.00% Oct 12 00 0 40 40.00 0.00% 01 0 35 35.00 0.00% 02 0 26 26.00 0.00% 03 0 41 41.00 0.00% 04 0 38 38.00 0.00% 05 0 71 71.00 0.00% 06 0 29 29.00 0.00% 07 0 46 46.00 0.00% 08 0 47 47.00 0.00% 09 0 43 43.00 0.00% 10 0 35 35.00 0.00% 11 0 36 36.00 0.00% 12 0 40 40.00 0.00% 13 0 48 48.00 0.00% 14 0 39 39.00 0.00% 15 0 25 25.00 0.00% 16 0 29 29.00 0.00% 17 0 49 49.00 0.00% 18 0 45 45.00 0.00% 19 0 38 38.00 0.00% 20 0 31 31.00 0.00% 21 0 66 66.00 0.00% 22 0 35 35.00 0.00% 23 0 33 33.00 0.00% Day Hour Count Average / Second Oct 06 00 89 0.02/s 01 91 0.03/s 02 78 0.02/s 03 89 0.02/s 04 92 0.03/s 05 107 0.03/s 06 104 0.03/s 07 89 0.02/s 08 91 0.03/s 09 85 0.02/s 10 89 0.02/s 11 114 0.03/s 12 86 0.02/s 13 88 0.02/s 14 88 0.02/s 15 99 0.03/s 16 99 0.03/s 17 79 0.02/s 18 89 0.02/s 19 83 0.02/s 20 106 0.03/s 21 88 0.02/s 22 89 0.02/s 23 84 0.02/s Oct 07 00 92 0.03/s 01 89 0.02/s 02 90 0.03/s 03 94 0.03/s 04 90 0.03/s 05 91 0.03/s 06 85 0.02/s 07 87 0.02/s 08 92 0.03/s 09 83 0.02/s 10 95 0.03/s 11 80 0.02/s 12 83 0.02/s 13 139 0.04/s 14 150 0.04/s 15 154 0.04/s 16 140 0.04/s 17 120 0.03/s 18 152 0.04/s 19 99 0.03/s 20 90 0.03/s 21 120 0.03/s 22 106 0.03/s 23 88 0.02/s Oct 08 00 91 0.03/s 01 87 0.02/s 02 80 0.02/s 03 87 0.02/s 04 85 0.02/s 05 95 0.03/s 06 92 0.03/s 07 121 0.03/s 08 88 0.02/s 09 91 0.03/s 10 538 0.15/s 11 90 0.03/s 12 94 0.03/s 13 82 0.02/s 14 90 0.03/s 15 82 0.02/s 16 106 0.03/s 17 112 0.03/s 18 85 0.02/s 19 82 0.02/s 20 95 0.03/s 21 133 0.04/s 22 100 0.03/s 23 88 0.02/s Oct 09 00 113 0.03/s 01 112 0.03/s 02 121 0.03/s 03 87 0.02/s 04 80 0.02/s 05 93 0.03/s 06 100 0.03/s 07 112 0.03/s 08 126 0.04/s 09 136 0.04/s 10 151 0.04/s 11 146 0.04/s 12 156 0.04/s 13 144 0.04/s 14 162 0.04/s 15 150 0.04/s 16 97 0.03/s 17 76 0.02/s 18 90 0.03/s 19 100 0.03/s 20 81 0.02/s 21 83 0.02/s 22 100 0.03/s 23 88 0.02/s Oct 10 00 116 0.03/s 01 150 0.04/s 02 104 0.03/s 03 92 0.03/s 04 184 0.05/s 05 93 0.03/s 06 87 0.02/s 07 91 0.03/s 08 140 0.04/s 09 136 0.04/s 10 123 0.03/s 11 108 0.03/s 12 89 0.02/s 13 77 0.02/s 14 92 0.03/s 15 111 0.03/s 16 88 0.02/s 17 75 0.02/s 18 85 0.02/s 19 91 0.03/s 20 75 0.02/s 21 77 0.02/s 22 84 0.02/s 23 90 0.03/s Oct 11 00 117 0.03/s 01 135 0.04/s 02 103 0.03/s 03 82 0.02/s 04 278 0.08/s 05 148 0.04/s 06 104 0.03/s 07 129 0.04/s 08 101 0.03/s 09 89 0.02/s 10 113 0.03/s 11 111 0.03/s 12 126 0.04/s 13 91 0.03/s 14 90 0.03/s 15 85 0.02/s 16 81 0.02/s 17 91 0.03/s 18 110 0.03/s 19 85 0.02/s 20 90 0.03/s 21 86 0.02/s 22 94 0.03/s 23 85 0.02/s Oct 12 00 89 0.02/s 01 92 0.03/s 02 78 0.02/s 03 71 0.02/s 04 92 0.03/s 05 109 0.03/s 06 85 0.02/s 07 86 0.02/s 08 196 0.05/s 09 188 0.05/s 10 109 0.03/s 11 82 0.02/s 12 90 0.03/s 13 92 0.03/s 14 93 0.03/s 15 76 0.02/s 16 92 0.03/s 17 111 0.03/s 18 106 0.03/s 19 93 0.03/s 20 105 0.03/s 21 138 0.04/s 22 92 0.03/s 23 82 0.02/s Day Hour Count Average Duration Average idle time Oct 06 00 89 28m 27m47s 01 91 26m21s 26m19s 02 78 29m56s 29m55s 03 89 27m22s 27m22s 04 92 24m50s 24m49s 05 107 22m30s 22m28s 06 104 22m8s 22m7s 07 89 26m48s 26m47s 08 91 26m7s 26m6s 09 85 28m19s 28m18s 10 89 27m21s 27m20s 11 114 21m23s 21m20s 12 86 28m32s 28m31s 13 88 27m51s 27m51s 14 88 27m43s 27m40s 15 99 24m23s 24m22s 16 99 23m56s 23m56s 17 79 29m33s 29m32s 18 89 27m50s 27m48s 19 83 28m49s 28m48s 20 106 23m19s 23m18s 21 88 25m30s 25m29s 22 89 27m34s 27m33s 23 84 28m59s 28m58s Oct 07 00 92 26m39s 26m27s 01 89 26m36s 26m35s 02 90 26m33s 26m32s 03 94 23m58s 23m58s 04 90 27m7s 27m6s 05 91 25m12s 25m10s 06 85 28m25s 28m23s 07 87 27m15s 27m15s 08 92 27m21s 27m20s 09 83 28m59s 28m58s 10 95 26m40s 26m38s 11 80 29m28s 29m27s 12 83 27m55s 27m53s 13 139 17m21s 17m12s 14 150 16m16s 16m5s 15 154 16m2s 15m58s 16 140 17m40s 17m28s 17 120 19m45s 19m29s 18 152 16m26s 16m13s 19 99 23m35s 23m29s 20 90 26m55s 26m53s 21 120 19m8s 19m8s 22 106 23m3s 23m2s 23 88 25m46s 25m42s Oct 08 00 91 27m14s 27m2s 01 87 26m55s 26m54s 02 80 28m35s 28m34s 03 87 27m49s 27m48s 04 85 28m49s 28m46s 05 95 24m44s 24m43s 06 92 26m53s 26m52s 07 121 19m33s 19m33s 08 88 27m32s 27m32s 09 91 27m20s 27m19s 10 538 4m34s 4m33s 11 90 26m48s 26m42s 12 94 25m54s 25m54s 13 82 29m1s 28m59s 14 90 26m53s 26m51s 15 82 29m44s 29m43s 16 106 23m35s 23m34s 17 112 22m24s 22m22s 18 85 27m29s 27m27s 19 82 28m50s 28m49s 20 95 25m9s 25m8s 21 133 16m50s 16m49s 22 100 24m19s 24m17s 23 88 26m17s 26m16s Oct 09 00 113 21m34s 21m23s 01 112 19m21s 19m20s 02 121 20m26s 20m26s 03 87 27m13s 27m10s 04 80 29m19s 29m17s 05 93 26m49s 26m47s 06 100 25m11s 25m8s 07 112 21m28s 21m26s 08 126 18m28s 18m11s 09 136 18m34s 18m19s 10 151 16m27s 16m17s 11 146 16m5s 15m54s 12 156 16m4s 15m58s 13 144 17m17s 17m3s 14 162 14m41s 14m30s 15 150 15m58s 15m46s 16 97 25m38s 25m36s 17 76 30m46s 30m45s 18 92 24m21s 24m19s 19 98 22m43s 22m43s 20 81 29m56s 29m55s 21 83 28m58s 28m57s 22 100 24m29s 24m28s 23 88 26m51s 26m50s Oct 10 00 116 21m16s 21m6s 01 150 16m28s 16m27s 02 104 21m48s 21m47s 03 92 27m 26m59s 04 184 13m48s 13m47s 05 93 24m5s 24m3s 06 87 27m36s 27m33s 07 91 26m17s 26m16s 08 140 18m25s 18m24s 09 133 18m2s 18m 10 126 19m31s 19m30s 11 108 22m10s 22m10s 12 89 26m38s 26m37s 13 77 30m53s 30m52s 14 92 27m28s 27m25s 15 111 21m31s 21m31s 16 88 25m32s 25m31s 17 75 30m18s 30m18s 18 85 27m24s 27m22s 19 91 27m16s 27m15s 20 75 29m46s 29m46s 21 77 30m25s 30m24s 22 84 29m29s 29m28s 23 90 26m21s 26m18s Oct 11 00 117 21m19s 21m10s 01 135 18m19s 18m18s 02 103 23m3s 23m2s 03 82 28m35s 28m34s 04 278 8m50s 8m50s 05 148 17m37s 17m36s 06 104 22m40s 22m38s 07 129 18m55s 18m54s 08 101 23m31s 23m30s 09 89 27m44s 27m43s 10 113 20m57s 20m47s 11 111 22m31s 22m31s 12 126 19m 19m 13 91 26m10s 26m9s 14 90 26m59s 26m56s 15 85 28m48s 28m47s 16 81 27m1s 27m 17 91 26m53s 26m52s 18 110 21m25s 21m23s 19 85 27m56s 27m55s 20 90 26m48s 26m47s 21 86 26m1s 26m 22 94 25m22s 25m22s 23 85 28m15s 28m12s Oct 12 00 89 28m13s 28m1s 01 92 26m46s 26m44s 02 78 29m50s 29m50s 03 71 32m17s 32m16s 04 92 27m32s 27m31s 05 109 22m10s 22m9s 06 85 27m27s 27m27s 07 86 28m38s 28m36s 08 196 12m52s 12m51s 09 188 12m21s 12m20s 10 109 22m59s 22m59s 11 82 29m42s 29m41s 12 90 26m46s 26m45s 13 92 26m8s 26m6s 14 93 26m6s 26m5s 15 76 29m22s 29m22s 16 92 26m3s 26m3s 17 111 21m59s 21m58s 18 105 22m50s 22m45s 19 94 26m4s 25m11s 20 105 23m17s 23m17s 21 138 16m36s 16m35s 22 92 25m54s 25m53s 23 82 29m7s 29m6s -
Connections
Established Connections
Key values
- 46 connections Connection Peak
- 2024-10-08 10:18:45 Date
Connections per database
Key values
- ctdprd51 Main Database
- 17,632 connections Total
Connections per user
Key values
- pubeu Main User
- 17,632 connections Total
-
Sessions
Simultaneous sessions
Key values
- 53 sessions Session Peak
- 2024-10-08 10:20:46 Date
Histogram of session times
Key values
- 11,963 1800000-3600000ms duration
Sessions per database
Key values
- ctdprd51 Main Database
- 17,632 sessions Total
Sessions per user
Key values
- pubeu Main User
- 17,632 sessions Total
Sessions per host
Key values
- 10.12.5.37 Main Host
- 17,632 sessions Total
-
Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 136,850 buffers Checkpoint Peak
- 2024-10-10 23:04:54 Date
- 1620.037 seconds Highest write time
- 0.006 seconds Sync time
Checkpoints Wal files
Key values
- 68 files Wal files usage Peak
- 2024-10-09 03:34:46 Date
Checkpoints distance
Key values
- 2,163.35 Mo Distance Peak
- 2024-10-09 03:34:46 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time Oct 06 00 1,009 101.289s 0.003s 101.36s 01 1,033 103.687s 0.002s 103.775s 02 334 33.645s 0.002s 33.68s 03 313 31.534s 0.002s 31.566s 04 53,695 1,619.088s 0.002s 1,619.574s 05 23,554 1,740.358s 0.003s 1,740.438s 06 1,282 128.667s 0.003s 128.699s 07 814 81.752s 0.002s 81.784s 08 290 29.231s 0.002s 29.261s 09 272 27.431s 0.002s 27.46s 10 290 29.238s 0.002s 29.269s 11 328 33.063s 0.002s 33.093s 12 376 37.756s 0.002s 37.787s 13 279 28.135s 0.002s 28.167s 14 435 43.795s 0.002s 43.826s 15 357 35.964s 0.002s 35.994s 16 210 21.228s 0.002s 21.26s 17 280 28.243s 0.002s 28.275s 18 640 64.313s 0.002s 64.403s 19 372 37.449s 0.002s 37.479s 20 267 26.917s 0.002s 26.948s 21 422 42.363s 0.002s 42.393s 22 185 18.722s 0.002s 18.751s 23 186 18.817s 0.002s 18.848s Oct 07 00 665 66.771s 0.001s 66.786s 01 50,614 1,632.072s 0.004s 1,632.565s 02 223 22.534s 0.002s 22.565s 03 223 22.535s 0.002s 22.566s 04 273 27.552s 0.002s 27.584s 05 504 50.697s 0.003s 50.78s 06 3,036 304.269s 0.002s 304.352s 07 506 50.888s 0.002s 50.921s 08 416 41.681s 0.003s 41.713s 09 396 39.866s 0.002s 39.897s 10 501 50.393s 0.002s 50.425s 11 901 90.473s 0.003s 90.559s 12 1,973 197.905s 0.003s 197.991s 13 540 54.309s 0.002s 54.345s 14 700 70.395s 0.003s 70.426s 15 896 89.889s 0.003s 89.922s 16 653 65.524s 0.003s 65.608s 17 564 56.631s 0.002s 56.665s 18 652 65.535s 0.002s 65.565s 19 370 37.263s 0.002s 37.292s 20 267 26.942s 0.002s 26.971s 21 363 36.563s 0.002s 36.593s 22 1,078 108.087s 0.002s 108.118s 23 5,305 531.567s 0.002s 531.682s Oct 08 00 5,597 560.488s 0.003s 560.6s 01 237 23.932s 0.002s 23.963s 02 1,511 151.564s 0.002s 151.65s 03 211 21.321s 0.002s 21.352s 04 131 13.214s 0.001s 13.229s 05 125,999 3,247.39s 0.003s 3,247.632s 06 533 53.493s 0.002s 53.574s 07 283 28.545s 0.002s 28.576s 08 54,007 1,645.026s 0.003s 1,645.529s 09 5,561 557.172s 0.002s 557.273s 10 315 31.761s 0.002s 31.811s 11 371 37.387s 0.002s 37.419s 12 1,406 140.994s 0.003s 141.025s 13 1,942 194.786s 0.002s 194.87s 14 429 43.168s 0.002s 43.2s 15 5,783 579.299s 0.003s 579.386s 16 453 45.575s 0.002s 45.606s 17 365 36.755s 0.003s 36.787s 18 437 43.88s 0.002s 43.909s 19 259 26.13s 0.002s 26.16s 20 164 16.608s 0.002s 16.642s 21 215 21.729s 0.002s 21.762s 22 849 85.248s 0.002s 85.28s 23 2,004 200.983s 0.002s 201.063s Oct 09 00 10,128 1,041.675s 0.004s 1,041.827s 01 239 24.041s 0.002s 24.074s 02 185 18.713s 0.002s 18.744s 03 131,358 1,728.503s 0.003s 1,729.385s 04 64,085 1,809.38s 0.002s 1,809.948s 05 4,628 463.746s 0.003s 463.839s 06 6,049 605.887s 0.004s 606.003s 07 1,241 124.442s 0.003s 124.476s 08 605 60.745s 0.002s 60.824s 09 1,563 156.853s 0.002s 156.915s 10 763 76.667s 0.002s 76.699s 11 1,425 142.929s 0.002s 143.007s 12 713 71.546s 0.002s 71.581s 13 608 61.097s 0.003s 61.129s 14 325 32.76s 0.002s 32.792s 15 560 56.216s 0.002s 56.296s 16 409 41.179s 0.002s 41.209s 17 178 18.013s 0.002s 18.043s 18 245 24.729s 0.002s 24.761s 19 346 34.744s 0.002s 34.776s 20 265 26.725s 0.002s 26.756s 21 785 78.841s 0.002s 78.871s 22 5,676 568.703s 0.002s 568.815s 23 76,287 1,633.351s 0.003s 1,633.822s Oct 10 00 1,769 177.442s 0.004s 177.514s 01 271 27.389s 0.002s 27.422s 02 2,107 211.317s 0.002s 211.397s 03 299 30.147s 0.002s 30.18s 04 2,836 284.232s 0.002s 284.313s 05 2,332 233.874s 0.003s 233.955s 06 639 64.207s 0.003s 64.238s 07 375 37.758s 0.007s 37.842s 08 1,108 111.228s 0.003s 111.262s 09 356 35.756s 0.002s 35.788s 10 284 28.565s 0.005s 28.648s 11 56,077 2,166.048s 0.005s 2,166.622s 12 304 30.639s 0.002s 30.674s 13 247 24.946s 0.002s 24.975s 14 257 25.941s 0.002s 25.973s 15 251 25.339s 0.003s 25.369s 16 453 45.579s 0.003s 45.609s 17 605 60.802s 0.002s 60.833s 18 161 16.306s 0.002s 16.337s 19 202 20.32s 0.002s 20.35s 20 252 25.462s 0.002s 25.494s 21 1,883 188.845s 0.003s 188.929s 22 99 10.009s 0.001s 10.024s 23 137,002 1,634.579s 0.003s 1,635.157s Oct 11 00 1,175 117.914s 0.003s 118.037s 01 50,143 1,630.959s 0.002s 1,631.421s 02 262 26.436s 0.002s 26.471s 03 6,028 603.913s 0.003s 604.028s 04 113,869 1,643.045s 0.003s 1,643.911s 05 5,277 528.8s 0.003s 528.903s 06 771 77.359s 0.002s 77.395s 07 574 57.717s 0.002s 57.747s 08 2,814 282.071s 0.002s 282.149s 09 4,546 455.463s 0.003s 455.567s 10 505 50.801s 0.002s 50.834s 11 1,107 111.09s 0.002s 111.121s 12 2,057 206.257s 0.002s 206.338s 13 822 82.447s 0.003s 82.478s 14 295 29.749s 0.002s 29.781s 15 490 49.279s 0.002s 49.36s 16 112 11.31s 0.001s 11.326s 17 58,606 1,636.46s 0.003s 1,637.007s 18 200 20.224s 0.002s 20.255s 19 260 26.232s 0.002s 26.264s 20 174 17.61s 0.002s 17.642s 21 393 39.561s 0.002s 39.591s 22 243 24.455s 0.002s 24.485s 23 474 47.678s 0.002s 47.709s Oct 12 00 918 92.221s 0.004s 92.307s 01 226 22.83s 0.002s 22.859s 02 94 9.519s 0.001s 9.535s 03 150,251 2,962.64s 0.003s 2,963.179s 04 112 11.318s 0.001s 11.333s 05 64,861 2,613.792s 0.004s 2,614.398s 06 244 24.559s 0.003s 24.594s 07 1,508 151.263s 0.003s 151.293s 08 56 5.713s 0.001s 5.728s 09 56,859 1,641.716s 0.005s 1,642.252s 10 244 24.632s 0.002s 24.664s 11 287 28.94s 0.003s 28.97s 12 12,341 1,235.948s 0.003s 1,236.1s 13 2,163 216.902s 0.002s 216.981s 14 160 16.21s 0.002s 16.244s 15 244 24.643s 0.002s 24.675s 16 143 14.503s 0.002s 14.535s 17 151 15.303s 0.002s 15.336s 18 264 26.634s 0.002s 26.666s 19 80 8.135s 0.001s 8.152s 20 43,067 1,670.449s 0.004s 1,670.545s 21 346 34.75s 0.002s 34.784s 22 256 25.831s 0.003s 25.862s 23 184 18.613s 0.002s 18.643s Day Hour Added Removed Recycled Synced files Longest sync Average sync Oct 06 00 0 0 0 76 0.001s 0.002s 01 0 0 1 47 0.001s 0.002s 02 0 0 0 37 0.001s 0.002s 03 0 0 0 35 0.001s 0.002s 04 0 0 36 32 0.002s 0.001s 05 0 0 0 52 0.001s 0.003s 06 0 0 0 39 0.001s 0.002s 07 0 0 0 30 0.001s 0.002s 08 0 0 0 29 0.001s 0.002s 09 0 0 0 34 0.001s 0.002s 10 0 0 0 22 0.001s 0.002s 11 0 0 0 32 0.001s 0.002s 12 0 0 0 67 0.001s 0.002s 13 0 0 0 61 0.001s 0.002s 14 0 0 0 71 0.001s 0.002s 15 0 0 0 31 0.001s 0.002s 16 0 0 0 21 0.001s 0.002s 17 0 0 0 29 0.001s 0.002s 18 0 0 1 48 0.001s 0.002s 19 0 0 0 24 0.001s 0.002s 20 0 0 0 22 0.001s 0.002s 21 0 0 0 31 0.001s 0.002s 22 0 0 0 21 0.001s 0.002s 23 0 0 0 20 0.001s 0.002s Oct 07 00 0 0 0 23 0.001s 0.001s 01 0 0 34 92 0.001s 0.003s 02 0 0 0 37 0.001s 0.002s 03 0 0 0 34 0.001s 0.002s 04 0 0 0 41 0.001s 0.002s 05 0 0 1 52 0.001s 0.002s 06 0 0 1 165 0.001s 0.002s 07 0 0 0 124 0.001s 0.002s 08 0 0 0 121 0.001s 0.002s 09 0 0 0 114 0.001s 0.002s 10 0 0 0 73 0.001s 0.002s 11 0 0 1 52 0.001s 0.002s 12 0 0 1 62 0.002s 0.002s 13 0 0 0 176 0.001s 0.002s 14 0 0 0 124 0.001s 0.002s 15 0 0 0 139 0.001s 0.002s 16 0 0 1 59 0.001s 0.002s 17 0 0 0 114 0.001s 0.002s 18 0 0 0 78 0.001s 0.002s 19 0 0 0 28 0.001s 0.002s 20 0 0 0 21 0.001s 0.002s 21 0 0 0 28 0.001s 0.002s 22 0 0 0 36 0.001s 0.002s 23 0 0 3 45 0.001s 0.002s Oct 08 00 0 0 3 86 0.001s 0.002s 01 0 0 0 37 0.001s 0.002s 02 0 0 1 56 0.001s 0.002s 03 0 0 0 30 0.001s 0.002s 04 0 0 0 16 0.001s 0.001s 05 0 31 4 70 0.001s 0.003s 06 0 0 1 47 0.001s 0.002s 07 0 0 0 68 0.001s 0.002s 08 0 0 36 135 0.001s 0.002s 09 0 0 3 86 0.001s 0.002s 10 0 0 1 34 0.001s 0.002s 11 0 0 0 87 0.001s 0.002s 12 0 0 0 42 0.002s 0.002s 13 0 0 1 40 0.001s 0.002s 14 0 0 0 78 0.001s 0.002s 15 0 0 4 190 0.001s 0.002s 16 0 0 0 116 0.001s 0.002s 17 0 0 0 71 0.001s 0.002s 18 0 0 0 107 0.001s 0.002s 19 0 0 0 31 0.001s 0.002s 20 0 0 0 23 0.001s 0.002s 21 0 0 0 21 0.001s 0.002s 22 0 0 0 36 0.001s 0.002s 23 0 0 1 54 0.001s 0.002s Oct 09 00 0 0 7 107 0.001s 0.002s 01 0 0 0 36 0.001s 0.002s 02 0 0 0 27 0.001s 0.002s 03 0 0 68 61 0.002s 0.002s 04 0 0 42 60 0.001s 0.002s 05 0 0 2 55 0.001s 0.002s 06 0 0 4 132 0.001s 0.002s 07 0 0 0 132 0.001s 0.002s 08 0 0 1 126 0.001s 0.002s 09 0 0 0 150 0.001s 0.002s 10 0 0 0 135 0.001s 0.002s 11 0 0 1 44 0.001s 0.002s 12 0 0 0 39 0.001s 0.002s 13 0 0 0 34 0.002s 0.002s 14 0 0 0 71 0.001s 0.002s 15 0 0 1 117 0.001s 0.002s 16 0 0 0 32 0.001s 0.002s 17 0 0 0 20 0.001s 0.002s 18 0 0 0 25 0.001s 0.002s 19 0 0 0 27 0.001s 0.002s 20 0 0 0 20 0.001s 0.002s 21 0 0 0 33 0.001s 0.002s 22 0 0 4 35 0.001s 0.002s 23 0 0 36 44 0.002s 0.002s Oct 10 00 0 0 0 86 0.002s 0.002s 01 0 0 0 36 0.001s 0.002s 02 0 0 1 40 0.001s 0.002s 03 0 0 0 35 0.001s 0.002s 04 0 0 1 59 0.001s 0.002s 05 0 0 1 68 0.001s 0.002s 06 0 0 0 93 0.002s 0.002s 07 0 0 1 91 0.001s 0.002s 08 0 0 0 126 0.002s 0.002s 09 0 0 0 33 0.001s 0.002s 10 0 0 0 103 0.001s 0.001s 11 0 0 38 79 0.002s 0.003s 12 0 0 0 31 0.001s 0.002s 13 0 0 0 71 0.001s 0.002s 14 0 0 0 38 0.001s 0.002s 15 0 0 0 65 0.001s 0.002s 16 0 0 0 117 0.001s 0.002s 17 0 0 0 128 0.001s 0.002s 18 0 0 0 26 0.001s 0.002s 19 0 0 0 20 0.001s 0.002s 20 0 0 0 29 0.001s 0.002s 21 0 0 1 34 0.001s 0.002s 22 0 0 0 10 0.001s 0.001s 23 0 0 41 56 0.001s 0.003s Oct 11 00 0 0 1 78 0.002s 0.002s 01 0 0 33 54 0.001s 0.002s 02 0 0 0 36 0.001s 0.002s 03 0 0 4 48 0.001s 0.002s 04 0 0 68 59 0.001s 0.002s 05 0 0 3 65 0.001s 0.002s 06 0 0 0 105 0.001s 0.002s 07 0 0 0 138 0.001s 0.002s 08 0 0 1 103 0.001s 0.002s 09 0 0 3 79 0.002s 0.002s 10 0 0 0 122 0.001s 0.002s 11 0 0 0 93 0.001s 0.002s 12 0 0 1 56 0.001s 0.002s 13 0 0 0 124 0.001s 0.002s 14 0 0 0 40 0.001s 0.002s 15 0 0 1 77 0.001s 0.002s 16 0 0 0 53 0.001s 0.001s 17 0 0 39 105 0.001s 0.003s 18 0 0 0 27 0.001s 0.002s 19 0 0 0 32 0.001s 0.002s 20 0 0 0 21 0.001s 0.002s 21 0 0 0 28 0.001s 0.002s 22 0 0 0 21 0.001s 0.002s 23 0 0 0 30 0.001s 0.002s Oct 12 00 0 0 1 70 0.001s 0.002s 01 0 0 0 35 0.001s 0.002s 02 0 0 0 18 0.001s 0.001s 03 0 0 38 79 0.001s 0.003s 04 0 0 0 19 0.001s 0.001s 05 0 0 40 85 0.001s 0.003s 06 0 0 0 29 0.001s 0.002s 07 0 0 0 35 0.001s 0.002s 08 0 0 0 10 0.001s 0.001s 09 0 0 38 57 0.001s 0.003s 10 0 0 0 22 0.001s 0.002s 11 0 0 0 28 0.001s 0.002s 12 0 0 7 41 0.001s 0.002s 13 0 0 1 39 0.001s 0.002s 14 0 0 0 20 0.001s 0.002s 15 0 0 0 28 0.001s 0.002s 16 0 0 0 20 0.001s 0.002s 17 0 0 0 20 0.001s 0.002s 18 0 0 0 36 0.001s 0.002s 19 0 0 0 11 0.001s 0.001s 20 0 0 1 43 0.002s 0.003s 21 0 0 0 27 0.001s 0.002s 22 0 0 0 20 0.001s 0.002s 23 0 0 0 24 0.001s 0.002s Day Hour Count Avg time (sec) Oct 06 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Oct 07 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Oct 08 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Oct 09 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Oct 10 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Oct 11 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Oct 12 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Day Hour Mean distance Mean estimate Oct 06 00 3,098.00 kB 31,756.00 kB 01 2,941.50 kB 26,110.00 kB 02 537.00 kB 21,472.00 kB 03 555.50 kB 17,494.50 kB 04 585,265.00 kB 585,265.00 kB 05 640.33 kB 475,938.33 kB 06 704.50 kB 365,065.50 kB 07 487.50 kB 295,796.00 kB 08 457.50 kB 239,660.00 kB 09 512.00 kB 194,221.00 kB 10 443.50 kB 157,409.00 kB 11 668.50 kB 127,632.50 kB 12 824.50 kB 103,505.00 kB 13 515.50 kB 83,979.50 kB 14 911.50 kB 68,192.50 kB 15 608.50 kB 55,330.00 kB 16 333.00 kB 44,904.50 kB 17 602.50 kB 36,460.50 kB 18 1,496.00 kB 29,822.00 kB 19 572.00 kB 24,282.50 kB 20 402.00 kB 19,745.50 kB 21 734.50 kB 16,133.00 kB 22 311.00 kB 13,129.50 kB 23 288.00 kB 10,694.50 kB Oct 07 00 4,771.00 kB 9,608.00 kB 01 185,830.67 kB 503,276.33 kB 02 404.50 kB 385,912.00 kB 03 452.00 kB 312,672.50 kB 04 564.50 kB 253,369.00 kB 05 1,214.50 kB 205,422.50 kB 06 10,730.50 kB 167,591.50 kB 07 1,378.00 kB 136,835.50 kB 08 1,074.50 kB 111,073.00 kB 09 852.50 kB 90,132.00 kB 10 1,172.00 kB 73,263.50 kB 11 2,432.00 kB 59,792.50 kB 12 7,092.00 kB 49,724.50 kB 13 1,358.00 kB 40,535.00 kB 14 1,729.00 kB 33,150.50 kB 15 2,780.50 kB 27,326.50 kB 16 1,765.00 kB 22,596.50 kB 17 1,683.00 kB 18,578.50 kB 18 1,419.00 kB 15,316.00 kB 19 871.00 kB 12,608.00 kB 20 224.00 kB 10,266.00 kB 21 789.00 kB 8,423.50 kB 22 2,943.00 kB 7,216.50 kB 23 22,956.00 kB 24,307.00 kB Oct 08 00 23,200.50 kB 42,658.00 kB 01 393.50 kB 34,681.50 kB 02 5,006.00 kB 29,002.50 kB 03 266.00 kB 23,596.50 kB 04 470.00 kB 20,171.00 kB 05 194,642.00 kB 355,431.67 kB 06 850.50 kB 412,761.50 kB 07 670.50 kB 334,444.00 kB 08 297,518.50 kB 564,123.00 kB 09 28,519.00 kB 459,907.00 kB 10 540.00 kB 375,125.00 kB 11 974.50 kB 304,039.00 kB 12 4,269.50 kB 247,057.00 kB 13 6,913.50 kB 201,449.00 kB 14 1,074.50 kB 163,335.50 kB 15 29,849.50 kB 137,977.50 kB 16 1,032.00 kB 111,953.00 kB 17 809.50 kB 90,876.00 kB 18 1,198.50 kB 73,800.00 kB 19 522.00 kB 59,921.50 kB 20 242.50 kB 48,584.50 kB 21 240.00 kB 39,394.50 kB 22 1,665.50 kB 32,106.00 kB 23 6,552.00 kB 27,306.00 kB Oct 09 00 53,298.00 kB 98,336.00 kB 01 449.00 kB 79,864.00 kB 02 243.00 kB 64,752.50 kB 03 558,420.50 kB 1,052,711.50 kB 04 342,810.00 kB 917,515.00 kB 05 19,185.50 kB 747,483.00 kB 06 30,172.00 kB 608,637.50 kB 07 4,131.50 kB 496,127.50 kB 08 1,829.00 kB 402,440.50 kB 09 3,823.50 kB 326,511.00 kB 10 2,213.00 kB 265,082.00 kB 11 4,212.00 kB 215,250.00 kB 12 2,112.00 kB 174,975.50 kB 13 1,237.00 kB 141,989.00 kB 14 883.50 kB 115,215.00 kB 15 1,404.00 kB 93,597.00 kB 16 957.00 kB 76,016.00 kB 17 331.50 kB 61,644.50 kB 18 412.00 kB 50,005.00 kB 19 746.50 kB 40,625.50 kB 20 439.50 kB 33,016.00 kB 21 1,948.50 kB 26,977.00 kB 22 28,098.00 kB 39,316.50 kB 23 294,543.50 kB 558,952.50 kB Oct 10 00 5,515.00 kB 453,746.00 kB 01 483.00 kB 367,692.50 kB 02 6,540.00 kB 298,509.50 kB 03 572.50 kB 242,456.00 kB 04 8,880.50 kB 197,646.00 kB 05 7,136.50 kB 161,783.00 kB 06 1,063.00 kB 131,322.50 kB 07 783.00 kB 106,549.50 kB 08 3,971.00 kB 87,045.00 kB 09 570.50 kB 70,614.00 kB 10 1,263.00 kB 60,373.00 kB 11 204,960.67 kB 505,177.33 kB 12 515.00 kB 390,841.50 kB 13 620.50 kB 316,666.00 kB 14 516.50 kB 256,608.50 kB 15 506.00 kB 207,948.50 kB 16 1,516.00 kB 168,695.00 kB 17 1,381.50 kB 136,927.00 kB 18 282.50 kB 110,995.00 kB 19 357.00 kB 89,972.00 kB 20 639.50 kB 72,999.00 kB 21 5,802.00 kB 59,737.50 kB 22 268.00 kB 51,497.00 kB 23 225,298.00 kB 609,985.00 kB Oct 11 00 3,975.50 kB 468,268.50 kB 01 275,605.00 kB 523,342.50 kB 02 398.50 kB 423,979.50 kB 03 30,407.50 kB 349,197.50 kB 04 553,034.00 kB 1,050,125.50 kB 05 24,834.50 kB 853,262.00 kB 06 1,262.00 kB 693,409.50 kB 07 1,489.00 kB 561,930.50 kB 08 8,726.50 kB 456,156.00 kB 09 22,930.50 kB 372,556.50 kB 10 1,088.50 kB 303,974.50 kB 11 3,077.50 kB 246,616.00 kB 12 6,070.00 kB 201,096.50 kB 13 2,050.00 kB 163,259.00 kB 14 566.50 kB 132,366.00 kB 15 1,098.50 kB 107,437.00 kB 16 462.00 kB 91,676.00 kB 17 215,071.33 kB 582,246.33 kB 18 270.50 kB 446,454.00 kB 19 615.50 kB 361,743.00 kB 20 317.00 kB 293,073.50 kB 21 709.50 kB 237,492.00 kB 22 458.50 kB 192,480.00 kB 23 943.00 kB 156,049.50 kB Oct 12 00 2,728.50 kB 126,899.00 kB 01 392.00 kB 102,924.00 kB 02 424.00 kB 87,818.00 kB 03 205,997.00 kB 437,518.33 kB 04 562.00 kB 357,451.00 kB 05 218,881.67 kB 506,478.67 kB 06 660.00 kB 393,050.00 kB 07 1,052.50 kB 318,521.00 kB 08 273.00 kB 271,674.00 kB 09 207,744.67 kB 562,139.67 kB 10 439.00 kB 431,077.00 kB 11 584.50 kB 349,296.00 kB 12 59,813.50 kB 294,292.00 kB 13 6,892.50 kB 239,095.50 kB 14 295.00 kB 194,318.00 kB 15 570.00 kB 157,484.50 kB 16 303.50 kB 127,643.00 kB 17 330.00 kB 103,449.00 kB 18 567.00 kB 83,878.50 kB 19 303.00 kB 71,590.00 kB 20 1,165.67 kB 58,355.67 kB 21 712.50 kB 45,001.50 kB 22 428.00 kB 36,557.50 kB 23 337.50 kB 29,681.00 kB -
Temporary Files
Size of temporary files
Key values
- 5.86 GiB Temp Files size Peak
- 2024-10-09 08:07:14 Date
Number of temporary files
Key values
- 6 per second Temp Files Peak
- 2024-10-09 08:07:14 Date
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size Oct 06 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Oct 07 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Oct 08 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Oct 09 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 6 5.86 GiB 999.72 MiB 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Oct 10 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Oct 11 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Oct 12 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Queries generating the most temporary files (N)
Rank Count Total size Min size Max size Avg size Query 1 6 5.86 GiB 878.34 MiB 1.00 GiB 999.72 MiB select distinct ;-
select distinct ;
Date: 2024-10-09 08:07:14 Duration: 0ms
Queries generating the largest temporary files
Rank Size Query 1 1.00 GiB select distinct ;[ Date: 2024-10-09 08:07:14 ]
2 1.00 GiB select distinct ;[ Date: 2024-10-09 08:07:14 ]
3 1.00 GiB select distinct ;[ Date: 2024-10-09 08:07:14 ]
4 1.00 GiB select distinct ;[ Date: 2024-10-09 08:07:14 ]
5 1.00 GiB select distinct ;[ Date: 2024-10-09 08:07:14 ]
6 878.34 MiB select distinct ;[ Date: 2024-10-09 08:07:14 ]
-
Vacuums
Vacuums / Analyzes Distribution
Key values
- 22.28 sec Highest CPU-cost vacuum
Table pub1.term_set_enrichment_agent
Database ctdprd51 - 2024-10-12 02:16:40 Date
- 0 sec Highest CPU-cost analyze
Table
Database ctdprd51 - Date
Average Autovacuum Duration
Key values
- 22.28 sec Highest CPU-cost vacuum
Table pub1.term_set_enrichment_agent
Database ctdprd51 - 2024-10-12 02:16:40 Date
Analyzes per table
Key values
- pubc.log_query (167) Main table analyzed (database ctdprd51)
- 191 analyzes Total
Vacuums per table
Key values
- pubc.log_query (29) Main table vacuumed on database ctdprd51
- 46 vacuums Total
Index Buffer usage Skipped WAL usage Table Vacuums scans hits misses dirtied pins frozen records full page bytes ctdprd51.pubc.log_query 29 27 14,054 0 3,035 0 11 4,767 899 6,302,455 ctdprd51.pub1.term_set_enrichment 5 0 15,860 0 6,077 0 0 7,707 7 507,496 ctdprd51.pub1.term_set_enrichment_agent 4 0 697,646 0 247,430 0 0 348,439 19 20,705,973 ctdprd51.pg_toast.pg_toast_2619 2 2 8,563 0 2,291 0 19,923 6,648 2,174 1,289,016 ctdprd51.pub1.term_comp 2 0 356 0 13 0 0 51 4 30,535 ctdprd51.pub1.term_comp_agent 1 0 212 0 57 0 0 78 1 13,021 ctdprd51.pg_catalog.pg_sequence 1 1 28 0 4 0 0 3 1 755 ctdprd51.pg_catalog.pg_statistic 1 1 651 0 125 0 37 401 118 510,162 ctdprd51.pg_toast.pg_toast_486223 1 0 54 0 4 0 0 3 1 8,503 Total 46 31 737,424 950 259,036 0 19,971 368,097 3,224 29,367,916 Tuples removed per table
Key values
- pg_toast.pg_toast_2619 (8237) Main table with removed tuples on database ctdprd51
- 14044 tuples Total removed
Index Tuples Pages Table Vacuums scans removed remain not yet removable removed remain ctdprd51.pg_toast.pg_toast_2619 2 2 8,237 40,414 0 0 25,184 ctdprd51.pubc.log_query 29 27 5,339 96,832 9 0 4,110 ctdprd51.pg_catalog.pg_statistic 1 1 415 2,636 0 0 290 ctdprd51.pg_catalog.pg_sequence 1 1 53 20 1 0 1 ctdprd51.pub1.term_comp_agent 1 0 0 37,097 0 0 320 ctdprd51.pub1.term_set_enrichment 5 0 0 2,253,764 0 0 37,287 ctdprd51.pub1.term_comp 2 0 0 7,955 0 0 76 ctdprd51.pub1.term_set_enrichment_agent 4 0 0 144,481,153 0 0 1,641,834 ctdprd51.pg_toast.pg_toast_486223 1 0 0 12 0 0 2 Total 46 31 14,044 146,919,883 10 0 1,709,104 Pages removed per table
Key values
- unknown (0) Main table with removed pages on database unknown
- 0 pages Total removed
Pages removed per tables
NO DATASET
Table Number of vacuums Index scans Tuples removed Pages removed ctdprd51.pub1.term_comp_agent 1 0 0 0 ctdprd51.pg_toast.pg_toast_2619 2 2 8237 0 ctdprd51.pg_catalog.pg_sequence 1 1 53 0 ctdprd51.pub1.term_set_enrichment 5 0 0 0 ctdprd51.pg_catalog.pg_statistic 1 1 415 0 ctdprd51.pub1.term_comp 2 0 0 0 ctdprd51.pub1.term_set_enrichment_agent 4 0 0 0 ctdprd51.pg_toast.pg_toast_486223 1 0 0 0 ctdprd51.pubc.log_query 29 27 5339 0 Total 46 31 14,044 0 Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs Oct 06 00 0 1 01 0 4 02 0 2 03 0 3 04 0 2 05 0 3 06 0 1 07 0 0 08 0 1 09 0 1 10 0 1 11 0 0 12 0 1 13 0 1 14 0 0 15 0 1 16 0 0 17 0 1 18 0 1 19 0 0 20 0 1 21 0 0 22 0 0 23 0 0 Oct 07 00 0 1 01 0 1 02 0 2 03 0 2 04 0 2 05 0 3 06 0 1 07 0 1 08 0 1 09 0 1 10 0 1 11 0 2 12 0 2 13 0 1 14 0 1 15 0 5 16 0 1 17 0 0 18 0 1 19 0 1 20 0 0 21 0 1 22 0 0 23 0 0 Oct 08 00 0 1 01 0 2 02 0 1 03 0 2 04 0 3 05 0 3 06 0 1 07 0 1 08 0 3 09 0 1 10 0 1 11 0 0 12 0 1 13 0 2 14 0 0 15 0 1 16 0 1 17 0 0 18 0 0 19 0 1 20 0 0 21 0 0 22 0 1 23 0 1 Oct 09 00 0 1 01 0 3 02 0 2 03 0 4 04 0 2 05 0 4 06 0 1 07 0 3 08 0 2 09 0 2 10 0 1 11 0 1 12 0 3 13 0 0 14 0 1 15 0 1 16 0 0 17 0 0 18 0 0 19 0 1 20 0 0 21 0 0 22 0 2 23 0 0 Oct 10 00 0 3 01 0 2 02 0 2 03 0 2 04 0 2 05 0 3 06 0 1 07 0 1 08 0 0 09 0 1 10 0 2 11 0 1 12 0 0 13 0 0 14 0 1 15 0 0 16 0 0 17 0 1 18 0 0 19 0 1 20 0 0 21 0 0 22 0 3 23 0 0 Oct 11 00 0 0 01 0 2 02 0 1 03 0 5 04 0 2 05 0 3 06 0 1 07 0 1 08 0 1 09 0 1 10 0 1 11 0 0 12 0 1 13 0 0 14 0 1 15 0 0 16 0 1 17 0 0 18 0 1 19 0 0 20 0 0 21 0 1 22 0 0 23 0 1 Oct 12 00 0 1 01 0 2 02 0 2 03 0 3 04 0 2 05 0 4 06 0 1 07 0 1 08 0 1 09 0 1 10 0 1 11 0 1 12 0 0 13 0 1 14 0 0 15 0 1 16 0 0 17 0 0 18 0 1 19 0 0 20 0 0 21 0 1 22 0 0 23 0 0 - 22.28 sec Highest CPU-cost vacuum
-
Locks
Locks by types
Key values
- unknown Main Lock Type
- 0 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query NO DATASET
Queries that waited the most
Rank Wait time Query NO DATASET
-
Queries
Queries by type
Key values
- 9,065 Total read queries
- 345 Total write queries
Queries by database
Key values
- unknown Main database
- 6,069 Requests
- 10h8m42s (unknown)
- Main time consuming database
Queries by user
Key values
- unknown Main user
- 13,484 Requests
User Request type Count Duration editeu Total 4 11s256ms select 4 11s256ms load Total 2 28s568ms select 2 28s568ms postgres Total 108 43m28s copy to 108 43m28s pubeu Total 7,243 10h26m57s cte 29 1m21s others 2 2s6ms select 7,212 10h25m33s qaeu Total 83 3m25s cte 19 1m3s select 64 2m21s unknown Total 13,484 22h42m56s copy to 683 6h34m58s cte 45 53s487ms others 9 45s990ms select 12,747 16h6m19s Duration by user
Key values
- 22h42m56s (unknown) Main time consuming user
User Request type Count Duration editeu Total 4 11s256ms select 4 11s256ms load Total 2 28s568ms select 2 28s568ms postgres Total 108 43m28s copy to 108 43m28s pubeu Total 7,243 10h26m57s cte 29 1m21s others 2 2s6ms select 7,212 10h25m33s qaeu Total 83 3m25s cte 19 1m3s select 64 2m21s unknown Total 13,484 22h42m56s copy to 683 6h34m58s cte 45 53s487ms others 9 45s990ms select 12,747 16h6m19s Queries by host
Key values
- unknown Main host
- 20,924 Requests
- 1d9h57m28s (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 9,369 Requests
- 14h58m39s (unknown)
- Main time consuming application
Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2024-10-09 14:06:06 Date
Number of cancelled queries (5 minutes period)
NO DATASET
-
Top Queries
Histogram of query times
Key values
- 8,826 1000-10000ms duration
Slowest individual queries
Rank Duration Query 1 23m44s COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2024-10-12 19:00:41 ]
2 23m38s COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2024-10-12 19:42:21 ]
3 17m10s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-10-08 00:17:11 ]
4 17m1s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-10-12 00:17:02 ]
5 16m59s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-10-07 00:17:00 ]
6 16m59s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-10-10 00:17:00 ]
7 16m58s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-10-09 00:17:00 ]
8 16m58s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-10-11 00:17:00 ]
9 16m57s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-10-06 00:16:59 ]
10 10m46s SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CFTR') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'R-HSA-390466' AND tp.pathway_acc_db_cd = 'REACT'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'LUMACAFTOR' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;[ Date: 2024-10-11 10:40:55 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
11 6m56s COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;[ Date: 2024-10-12 19:12:33 ]
12 6m46s COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;[ Date: 2024-10-12 19:54:01 ]
13 4m20s select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where diseaseTerm.id = ANY (ARRAY ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 3 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'HYPERTENSION' AND tl.object_type_id = 3))) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;[ Date: 2024-10-09 08:07:14 - Bind query: yes ]
14 4m15s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1228257') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-10-08 11:58:53 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
15 3m59s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1249122') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-10-06 11:51:34 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
16 3m46s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1249213') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-10-07 23:51:39 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
17 3m39s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1249213') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-10-09 09:38:17 - Bind query: yes ]
18 3m39s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1249213') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-10-12 09:47:47 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
19 3m39s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1249213') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-10-10 09:51:13 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
20 3m39s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1249213') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-10-10 23:52:21 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 1h59m5s 7 16m57s 17m10s 17m select maint_query_logs_archive ();Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Oct 06 00 1 16m57s 16m57s Oct 07 00 1 16m59s 16m59s Oct 08 00 1 17m10s 17m10s Oct 09 00 1 16m58s 16m58s Oct 10 00 1 16m59s 16m59s Oct 11 00 1 16m58s 16m58s Oct 12 00 1 17m1s 17m1s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-10-08 00:17:11 Duration: 17m10s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-10-12 00:17:02 Duration: 17m1s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-10-07 00:17:00 Duration: 16m59s
2 53m39s 100 10s642ms 1m57s 32s196ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Oct 07 15 7 5m37s 48s251ms 16 43 21m8s 29s504ms Oct 09 12 19 12m29s 39s438ms 13 31 14m23s 27s867ms [ User: pubeu - Total duration: 30m29s - Times executed: 59 ]
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SELECT /* BatchChemGODAO */ 'd052638' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1357427)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-10-07 16:33:17 Duration: 1m57s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'd052638' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1357427)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-10-09 13:20:18 Duration: 1m54s Bind query: yes
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SELECT /* BatchChemGODAO */ 'c006780' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1262309)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-10-09 12:42:09 Duration: 1m8s Database: ctdprd51 User: pubeu Bind query: yes
3 40m8s 100 11s168ms 58s411ms 24s88ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Oct 07 18 50 20m2s 24s42ms Oct 09 15 50 20m6s 24s133ms [ User: pubeu - Total duration: 24m19s - Times executed: 60 ]
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SELECT /* BatchChemGODAO */ 'c006780' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1262309)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-10-07 18:20:32 Duration: 58s411ms Bind query: yes
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SELECT /* BatchChemGODAO */ 'c006780' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1262309)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-10-09 15:06:02 Duration: 57s33ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'd013749' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1413942)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-10-09 15:04:13 Duration: 49s610ms Bind query: yes
4 37m52s 94 2s521ms 2m18s 24s176ms select ? "Input", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = d.id) "DiseaseCategories", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(distinct r.acc_txt, ?) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id where d.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by d.nm_sort, g.nm, "DirectEvidence", c.nm;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Oct 07 17 44 18m 24s560ms Oct 09 13 14 9m49s 42s142ms 14 36 10m1s 16s719ms [ User: pubeu - Total duration: 16m46s - Times executed: 43 ]
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd064420' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2088398) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2024-10-09 13:59:33 Duration: 2m18s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd064420' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2088398) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2024-10-07 17:13:08 Duration: 2m13s Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd006331' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2076076) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2024-10-09 14:17:49 Duration: 1m56s Bind query: yes
5 36m30s 15 1s518ms 4m15s 2m26s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Oct 06 11 1 3m59s 3m59s 19 1 3s45ms 3s45ms Oct 07 23 1 3m46s 3m46s Oct 08 04 1 3m22s 3m22s 11 1 4m15s 4m15s Oct 09 03 1 2m38s 2m38s 09 2 3m41s 1m50s Oct 10 09 1 3m39s 3m39s 23 1 3m39s 3m39s Oct 11 08 1 1s560ms 1s560ms 10 2 5s68ms 2s534ms 23 1 3m38s 3m38s Oct 12 09 1 3m39s 3m39s [ User: pubeu - Total duration: 29m26s - Times executed: 12 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1228257') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-10-08 11:58:53 Duration: 4m15s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1249122') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-10-06 11:51:34 Duration: 3m59s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1249213') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-10-07 23:51:39 Duration: 3m46s Database: ctdprd51 User: pubeu Bind query: yes
6 32m17s 278 6s691ms 7s258ms 6s967ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?))) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Oct 07 13 55 6m23s 6s969ms 14 80 9m17s 6s964ms Oct 09 10 69 8m 6s959ms 11 74 8m36s 6s977ms [ User: pubeu - Total duration: 9m3s - Times executed: 78 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'BISPHENOL A' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-09 10:36:06 Duration: 7s258ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'LIPOPOLYSACCHARIDES' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-09 11:40:19 Duration: 7s157ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'ACETAMINOPHEN' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-07 14:17:14 Duration: 7s132ms Bind query: yes
7 29m29s 253 6s734ms 7s357ms 6s992ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?)))) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Oct 07 13 41 4m45s 6s967ms 14 69 8m2s 6s998ms 15 9 1m3s 7s46ms Oct 09 10 50 5m49s 6s995ms 11 84 9m47s 6s993ms [ User: pubeu - Total duration: 8m3s - Times executed: 69 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'CISPLATIN' AND tl.object_type_id = 2))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'EPITHELIAL CELLS' AND tl.object_type_id = 10)))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-07 15:03:46 Duration: 7s357ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'BENZO(A)PYRENE' AND tl.object_type_id = 2))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'KIDNEY' AND tl.object_type_id = 10)))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-07 14:00:26 Duration: 7s178ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'ESTRADIOL' AND tl.object_type_id = 2))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'HEP G2 CELLS' AND tl.object_type_id = 10)))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-07 14:48:34 Duration: 7s172ms Bind query: yes
8 29m11s 1,239 1s389ms 1s683ms 1s413ms select coalesce(d.abbr_display, d.nm_display) nm # ?, d.description # ?, coalesce(d.abbr, d.nm) anchor # ?, get_homepage_url (d.id) url # ? from db d # ? where d.id in (# ? select l.db_id # ? from db_link l # ? where l.type_cd = ? # ? and l.object_type_id = ?) # ? order by ?;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Oct 06 00 7 9s890ms 1s412ms 01 12 16s891ms 1s407ms 02 4 5s669ms 1s417ms 03 7 9s904ms 1s414ms 04 8 11s255ms 1s406ms 05 8 11s335ms 1s416ms 06 8 11s300ms 1s412ms 07 1 1s397ms 1s397ms 08 8 11s316ms 1s414ms 09 12 17s10ms 1s417ms 10 11 15s548ms 1s413ms 11 4 5s637ms 1s409ms 12 3 4s249ms 1s416ms 13 8 11s275ms 1s409ms 14 13 18s407ms 1s415ms 15 5 7s56ms 1s411ms 16 6 8s447ms 1s407ms 17 5 7s38ms 1s407ms 18 9 12s765ms 1s418ms 19 7 9s884ms 1s412ms 20 4 5s595ms 1s398ms 21 11 15s516ms 1s410ms 22 5 7s73ms 1s414ms 23 9 12s735ms 1s415ms Oct 07 00 12 16s911ms 1s409ms 01 16 22s612ms 1s413ms 02 16 22s502ms 1s406ms 03 12 16s926ms 1s410ms 04 12 16s932ms 1s411ms 05 6 8s474ms 1s412ms 06 8 11s295ms 1s411ms 07 9 12s689ms 1s409ms 08 8 11s290ms 1s411ms 09 9 12s670ms 1s407ms 10 10 14s178ms 1s417ms 11 8 11s305ms 1s413ms 12 7 9s858ms 1s408ms 13 3 4s276ms 1s425ms 14 10 14s238ms 1s423ms 15 6 8s581ms 1s430ms 16 6 8s482ms 1s413ms 17 1 1s414ms 1s414ms 18 6 8s467ms 1s411ms 19 4 5s669ms 1s417ms 20 3 4s242ms 1s414ms 21 6 8s443ms 1s407ms 22 6 8s591ms 1s431ms 23 11 15s575ms 1s415ms Oct 08 00 8 11s287ms 1s410ms 01 11 15s481ms 1s407ms 02 7 9s893ms 1s413ms 03 11 15s550ms 1s413ms 04 8 11s288ms 1s411ms 05 6 8s500ms 1s416ms 06 1 1s418ms 1s418ms 07 8 11s363ms 1s420ms 08 4 5s652ms 1s413ms 09 5 7s73ms 1s414ms 10 2 2s903ms 1s451ms 11 5 7s86ms 1s417ms 12 6 8s485ms 1s414ms 13 6 8s558ms 1s426ms 14 4 5s663ms 1s415ms 15 10 14s165ms 1s416ms 16 5 7s183ms 1s436ms 17 2 2s953ms 1s476ms 18 4 5s636ms 1s409ms 19 8 11s310ms 1s413ms 20 2 2s844ms 1s422ms 21 2 2s823ms 1s411ms 22 9 12s686ms 1s409ms 23 3 4s240ms 1s413ms Oct 09 00 5 7s21ms 1s404ms 01 1 1s415ms 1s415ms 02 7 9s917ms 1s416ms 03 6 8s458ms 1s409ms 04 1 1s412ms 1s412ms 05 6 8s490ms 1s415ms 06 1 1s437ms 1s437ms 07 3 4s206ms 1s402ms 08 2 2s821ms 1s410ms 09 7 9s920ms 1s417ms 10 5 7s31ms 1s406ms 11 4 5s760ms 1s440ms 12 4 5s675ms 1s418ms 13 5 7s76ms 1s415ms 14 14 19s964ms 1s426ms 15 3 4s249ms 1s416ms 16 3 4s229ms 1s409ms 17 12 16s900ms 1s408ms 18 2 2s820ms 1s410ms 19 9 12s987ms 1s443ms 20 16 22s553ms 1s409ms 21 39 55s60ms 1s411ms 22 21 29s641ms 1s411ms 23 6 8s487ms 1s414ms Oct 10 00 9 12s648ms 1s405ms 01 5 7s188ms 1s437ms 02 8 11s292ms 1s411ms 03 5 7s62ms 1s412ms 04 7 9s893ms 1s413ms 05 4 5s639ms 1s409ms 06 6 8s475ms 1s412ms 07 4 5s645ms 1s411ms 08 4 5s647ms 1s411ms 09 8 11s294ms 1s411ms 10 7 9s837ms 1s405ms 11 5 7s35ms 1s407ms 12 12 16s932ms 1s411ms 13 4 5s655ms 1s413ms 14 3 4s242ms 1s414ms 15 5 7s63ms 1s412ms 16 3 4s229ms 1s409ms 17 8 11s274ms 1s409ms 18 12 16s923ms 1s410ms 19 4 5s654ms 1s413ms 20 4 5s669ms 1s417ms 21 10 14s161ms 1s416ms 22 11 15s488ms 1s408ms 23 14 19s738ms 1s409ms Oct 11 00 6 8s477ms 1s412ms 01 4 5s656ms 1s414ms 02 8 11s382ms 1s422ms 03 6 8s452ms 1s408ms 04 9 13s19ms 1s446ms 05 9 12s677ms 1s408ms 06 10 14s108ms 1s410ms 07 5 7s50ms 1s410ms 08 8 11s303ms 1s412ms 09 6 8s489ms 1s414ms 10 9 12s671ms 1s407ms 11 1 1s411ms 1s411ms 12 3 4s229ms 1s409ms 13 6 8s540ms 1s423ms 14 11 15s487ms 1s407ms 15 10 14s110ms 1s411ms 16 6 8s500ms 1s416ms 17 5 7s66ms 1s413ms 18 8 11s254ms 1s406ms 19 8 11s275ms 1s409ms 20 9 12s665ms 1s407ms 21 6 8s504ms 1s417ms 22 4 5s614ms 1s403ms 23 3 4s240ms 1s413ms Oct 12 00 14 19s755ms 1s411ms 01 7 9s876ms 1s410ms 02 7 9s881ms 1s411ms 03 5 7s54ms 1s410ms 04 13 18s354ms 1s411ms 05 8 11s279ms 1s409ms 06 8 11s243ms 1s405ms 07 10 14s152ms 1s415ms 08 12 16s987ms 1s415ms 09 11 15s666ms 1s424ms 10 12 16s983ms 1s415ms 11 10 14s91ms 1s409ms 12 10 14s107ms 1s410ms 13 14 19s768ms 1s412ms 14 10 14s62ms 1s406ms 15 8 11s271ms 1s408ms 16 8 11s296ms 1s412ms 17 8 11s416ms 1s427ms 18 11 15s597ms 1s417ms 19 12 17s81ms 1s423ms 20 11 15s572ms 1s415ms 21 6 8s501ms 1s416ms 22 5 7s65ms 1s413ms 23 8 11s305ms 1s413ms [ User: pubeu - Total duration: 13m18s - Times executed: 564 ]
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-10-09 19:42:51 Duration: 1s683ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-10-12 17:17:32 Duration: 1s573ms Bind query: yes
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-10-11 04:16:57 Duration: 1s572ms Database: ctdprd51 User: pubeu Bind query: yes
9 29m8s 88 2s356ms 2m11s 19s866ms select ? "Input", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = d.id) "DiseaseCategories", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(distinct r.acc_txt, ?) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id where d.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and gdr.source_cd = ? group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, c.nm, gdr.network_score order by d.nm_sort, g.nm, c.nm;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Oct 07 17 39 13m8s 20s217ms 18 6 2m53s 28s847ms Oct 09 14 43 13m6s 18s295ms [ User: pubeu - Total duration: 16m12s - Times executed: 52 ]
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd064420' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2088398) AND gdr.source_cd = 'I' GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, c.nm;
Date: 2024-10-07 17:46:02 Duration: 2m11s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd056486' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2076812) AND gdr.source_cd = 'I' GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, c.nm;
Date: 2024-10-09 14:23:37 Duration: 1m44s Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd056486' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2076812) AND gdr.source_cd = 'I' GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, c.nm;
Date: 2024-10-07 17:37:36 Duration: 1m43s Bind query: yes
10 26m4s 391 3s786ms 6s282ms 4s select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Oct 06 00 11 43s782ms 3s980ms 01 5 20s251ms 4s50ms 02 7 27s613ms 3s944ms 04 1 4s133ms 4s133ms 06 1 4s115ms 4s115ms 07 1 3s842ms 3s842ms 08 1 3s899ms 3s899ms 09 1 3s789ms 3s789ms 10 1 3s806ms 3s806ms 11 2 7s934ms 3s967ms 12 1 3s820ms 3s820ms 13 12 47s734ms 3s977ms 14 22 1m28s 4s4ms 15 21 1m23s 3s980ms 16 3 12s109ms 4s36ms 17 5 19s765ms 3s953ms 18 5 19s881ms 3s976ms 19 3 11s536ms 3s845ms 20 7 28s26ms 4s3ms 21 12 49s195ms 4s99ms 22 3 12s107ms 4s35ms 23 1 3s882ms 3s882ms Oct 07 00 2 7s951ms 3s975ms 01 1 3s961ms 3s961ms 02 2 8s462ms 4s231ms 03 1 3s884ms 3s884ms 04 2 8s544ms 4s272ms 05 4 15s786ms 3s946ms 07 1 3s941ms 3s941ms 08 3 11s642ms 3s880ms 09 3 12s233ms 4s77ms 12 2 7s819ms 3s909ms 13 1 3s829ms 3s829ms 17 2 7s998ms 3s999ms 18 1 4s380ms 4s380ms 21 1 4s17ms 4s17ms 23 10 39s611ms 3s961ms Oct 08 00 3 11s917ms 3s972ms 02 3 12s432ms 4s144ms 03 2 7s904ms 3s952ms 04 3 11s958ms 3s986ms 05 1 3s899ms 3s899ms 06 4 16s29ms 4s7ms 08 1 4s78ms 4s78ms 09 1 3s943ms 3s943ms 16 3 12s247ms 4s82ms 17 1 3s866ms 3s866ms 18 3 12s198ms 4s66ms 19 8 31s713ms 3s964ms 20 9 35s872ms 3s985ms 21 1 3s964ms 3s964ms 22 10 39s857ms 3s985ms 23 1 3s911ms 3s911ms Oct 09 00 6 23s819ms 3s969ms 01 15 1m 4s13ms 02 1 3s997ms 3s997ms 04 8 31s704ms 3s963ms 05 7 27s413ms 3s916ms 06 2 7s939ms 3s969ms 07 1 3s985ms 3s985ms 08 4 16s30ms 4s7ms 09 4 15s911ms 3s977ms 10 4 16s329ms 4s82ms 11 2 8s479ms 4s239ms 12 4 16s359ms 4s89ms 13 2 8s391ms 4s195ms 15 1 3s999ms 3s999ms 16 2 7s987ms 3s993ms 17 3 11s844ms 3s948ms 19 1 3s874ms 3s874ms 20 1 4s72ms 4s72ms 22 1 3s872ms 3s872ms 23 3 12s121ms 4s40ms Oct 10 00 2 7s716ms 3s858ms 01 1 4s86ms 4s86ms 02 3 11s875ms 3s958ms 03 3 12s315ms 4s105ms 04 1 4s182ms 4s182ms 05 1 4s163ms 4s163ms 07 1 3s971ms 3s971ms 08 5 19s764ms 3s952ms 10 1 4s55ms 4s55ms 11 8 31s446ms 3s930ms 12 2 8s165ms 4s82ms 13 6 23s698ms 3s949ms 15 2 7s862ms 3s931ms 17 1 3s988ms 3s988ms 18 3 12s701ms 4s233ms 19 4 16s820ms 4s205ms 21 3 11s800ms 3s933ms 22 1 4s57ms 4s57ms Oct 11 00 5 19s722ms 3s944ms 01 1 4s32ms 4s32ms 02 1 3s985ms 3s985ms 03 5 19s827ms 3s965ms 04 1 3s871ms 3s871ms 05 1 3s967ms 3s967ms 06 4 15s939ms 3s984ms 08 6 26s536ms 4s422ms 09 1 3s905ms 3s905ms 10 1 4s280ms 4s280ms 11 1 3s992ms 3s992ms 15 5 19s617ms 3s923ms 16 1 4s23ms 4s23ms 17 3 11s872ms 3s957ms 18 2 7s861ms 3s930ms 20 1 3s942ms 3s942ms Oct 12 04 2 8s111ms 4s55ms 07 3 11s829ms 3s943ms 09 3 11s887ms 3s962ms 11 2 7s673ms 3s836ms 12 1 3s912ms 3s912ms 13 1 4s9ms 4s9ms 15 1 3s907ms 3s907ms 16 1 3s895ms 3s895ms 22 2 7s778ms 3s889ms [ User: pubeu - Total duration: 10m27s - Times executed: 157 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1263173') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1263173') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-10-11 08:23:28 Duration: 6s282ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1263172') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1263172') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-10-06 21:18:02 Duration: 5s222ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1263172') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1263172') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-10-10 19:40:54 Duration: 5s150ms Database: ctdprd51 User: pubeu Bind query: yes
11 23m44s 1 23m44s 23m44s 23m44s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Oct 12 19 1 23m44s 23m44s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-10-12 19:00:41 Duration: 23m44s
12 23m38s 1 23m38s 23m38s 23m38s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Oct 12 19 1 23m38s 23m38s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-10-12 19:42:21 Duration: 23m38s
13 21m51s 277 1s394ms 14s523ms 4s736ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?))) and taxonterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?))) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Oct 07 13 46 3m32s 4s610ms 14 83 6m35s 4s762ms 15 8 37s354ms 4s669ms Oct 09 10 56 4m27s 4s771ms 11 84 6m40s 4s762ms [ User: pubeu - Total duration: 6m11s - Times executed: 67 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'BISPHENOL A' AND tl.object_type_id = 2))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'SUS SCROFA' AND tl.object_type_id = 1))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-09 10:38:16 Duration: 14s523ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = '(6-(4-(2-PIPERIDIN-1-YLETHOXY)PHENYL))-3-PYRIDIN-4-YLPYRAZOLO(1,5-A)PYRIMIDINE' AND tl.object_type_id = 2))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'SUS SCROFA' AND tl.object_type_id = 1))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-09 10:54:21 Duration: 14s520ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = '(6-(4-(2-PIPERIDIN-1-YLETHOXY)PHENYL))-3-PYRIDIN-4-YLPYRAZOLO(1,5-A)PYRIMIDINE' AND tl.object_type_id = 2))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'PIMEPHALES PROMELAS' AND tl.object_type_id = 1))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-07 14:05:25 Duration: 14s519ms Bind query: yes
14 21m32s 1,124 1s46ms 1s299ms 1s150ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where exposuremarkerterm.id = ? or receptorterm.id = ? group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Oct 06 00 10 11s879ms 1s187ms 01 7 8s109ms 1s158ms 02 7 8s238ms 1s176ms 03 8 9s541ms 1s192ms 04 8 9s527ms 1s190ms 05 4 4s877ms 1s219ms 06 11 12s657ms 1s150ms 07 4 4s604ms 1s151ms 08 7 8s74ms 1s153ms 09 7 8s82ms 1s154ms 10 7 8s179ms 1s168ms 11 4 4s578ms 1s144ms 12 5 5s785ms 1s157ms 13 2 2s325ms 1s162ms 14 9 10s283ms 1s142ms 15 8 9s192ms 1s149ms 16 9 10s216ms 1s135ms 17 10 11s452ms 1s145ms 18 4 4s665ms 1s166ms 19 6 6s755ms 1s125ms 20 16 18s456ms 1s153ms 21 3 3s354ms 1s118ms 22 6 7s104ms 1s184ms 23 3 3s513ms 1s171ms Oct 07 00 10 11s598ms 1s159ms 01 3 3s500ms 1s166ms 02 6 7s34ms 1s172ms 03 4 4s663ms 1s165ms 04 8 9s356ms 1s169ms 05 8 9s547ms 1s193ms 06 12 13s881ms 1s156ms 07 10 11s472ms 1s147ms 08 4 4s585ms 1s146ms 09 6 6s909ms 1s151ms 10 5 5s783ms 1s156ms 11 4 4s548ms 1s137ms 12 6 6s894ms 1s149ms 13 7 8s186ms 1s169ms 14 6 7s56ms 1s176ms 15 6 6s879ms 1s146ms 16 4 4s527ms 1s131ms 17 3 3s379ms 1s126ms 18 4 4s578ms 1s144ms 19 5 5s686ms 1s137ms 20 5 5s674ms 1s134ms 21 8 9s33ms 1s129ms 22 16 18s910ms 1s181ms 23 6 7s45ms 1s174ms Oct 08 00 7 8s99ms 1s157ms 01 5 5s784ms 1s156ms 02 6 7s22ms 1s170ms 03 10 11s673ms 1s167ms 04 4 4s709ms 1s177ms 05 3 3s731ms 1s243ms 06 9 10s254ms 1s139ms 07 5 5s725ms 1s145ms 08 5 5s794ms 1s158ms 09 8 9s180ms 1s147ms 10 8 9s239ms 1s154ms 11 9 10s336ms 1s148ms 12 5 5s786ms 1s157ms 13 7 8s18ms 1s145ms 14 9 10s480ms 1s164ms 15 5 5s696ms 1s139ms 16 6 7s107ms 1s184ms 17 7 8s114ms 1s159ms 18 7 7s969ms 1s138ms 19 6 6s802ms 1s133ms 20 2 2s276ms 1s138ms 21 5 5s723ms 1s144ms 22 4 4s676ms 1s169ms 23 5 5s906ms 1s181ms Oct 09 00 6 7s57ms 1s176ms 01 5 5s874ms 1s174ms 02 1 1s165ms 1s165ms 03 5 5s695ms 1s139ms 04 5 5s760ms 1s152ms 05 4 4s805ms 1s201ms 06 2 2s284ms 1s142ms 07 5 5s669ms 1s133ms 08 4 4s609ms 1s152ms 09 1 1s117ms 1s117ms 10 6 6s940ms 1s156ms 11 3 3s472ms 1s157ms 13 9 10s301ms 1s144ms 14 12 13s543ms 1s128ms 15 2 2s311ms 1s155ms 16 6 6s834ms 1s139ms 17 5 5s709ms 1s141ms 18 11 12s475ms 1s134ms 19 4 4s658ms 1s164ms 20 5 5s697ms 1s139ms 21 6 6s826ms 1s137ms 22 4 4s559ms 1s139ms 23 13 15s107ms 1s162ms Oct 10 00 7 7s984ms 1s140ms 01 4 4s561ms 1s140ms 02 4 4s559ms 1s139ms 03 5 5s643ms 1s128ms 04 9 10s279ms 1s142ms 05 7 8s57ms 1s151ms 06 4 4s538ms 1s134ms 07 4 4s606ms 1s151ms 08 2 2s245ms 1s122ms 09 5 5s667ms 1s133ms 10 4 4s585ms 1s146ms 11 5 5s727ms 1s145ms 12 8 9s299ms 1s162ms 13 10 11s405ms 1s140ms 14 10 11s489ms 1s148ms 15 9 10s142ms 1s126ms 16 7 8s268ms 1s181ms 17 5 5s745ms 1s149ms 18 5 5s641ms 1s128ms 19 5 5s721ms 1s144ms 20 3 3s402ms 1s134ms 21 4 4s537ms 1s134ms 22 7 8s218ms 1s174ms 23 4 4s508ms 1s127ms Oct 11 00 8 9s34ms 1s129ms 01 6 6s850ms 1s141ms 02 9 10s190ms 1s132ms 03 6 6s792ms 1s132ms 04 8 9s155ms 1s144ms 05 9 10s515ms 1s168ms 06 8 9s93ms 1s136ms 07 4 4s555ms 1s138ms 08 4 4s604ms 1s151ms 09 2 2s243ms 1s121ms 10 7 7s960ms 1s137ms 11 6 6s862ms 1s143ms 12 6 6s911ms 1s151ms 13 2 2s273ms 1s136ms 14 10 11s433ms 1s143ms 15 7 8s10ms 1s144ms 16 5 5s588ms 1s117ms 17 6 6s926ms 1s154ms 18 12 13s394ms 1s116ms 19 12 13s424ms 1s118ms 20 16 17s800ms 1s112ms 21 12 13s374ms 1s114ms 22 6 6s921ms 1s153ms 23 5 5s726ms 1s145ms Oct 12 00 8 9s324ms 1s165ms 01 5 5s802ms 1s160ms 02 10 11s511ms 1s151ms 03 7 8s30ms 1s147ms 04 9 10s205ms 1s133ms 05 9 10s513ms 1s168ms 06 11 12s571ms 1s142ms 07 13 14s734ms 1s133ms 08 13 14s690ms 1s130ms 09 10 11s398ms 1s139ms 10 11 12s518ms 1s138ms 11 10 11s474ms 1s147ms 12 8 9s139ms 1s142ms 13 8 9s8ms 1s126ms 14 2 2s197ms 1s98ms 15 9 10s357ms 1s150ms 16 4 4s574ms 1s143ms 17 2 2s245ms 1s122ms 18 7 7s956ms 1s136ms 19 11 12s467ms 1s133ms 20 4 4s733ms 1s183ms 21 19 22s236ms 1s170ms 22 15 17s525ms 1s168ms 23 14 16s504ms 1s178ms [ User: pubeu - Total duration: 9m20s - Times executed: 488 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1439394' or receptorTerm.id = '1439394' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-10-07 05:38:41 Duration: 1s299ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '2053645' or receptorTerm.id = '2053645' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-10-12 00:21:32 Duration: 1s290ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1439394' or receptorTerm.id = '1439394' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-10-08 05:43:42 Duration: 1s288ms Bind query: yes
15 14m22s 103 1s556ms 24s206ms 8s369ms select distinct phenotypeterm.nm as gonm, phenotypeterm.nm_html as gonmhtml, phenotypeterm.acc_txt as goacc, diseaseterm.nm as diseasenm, diseaseterm.nm_html as diseasenmhtml, diseaseterm.acc_txt as diseaseacc, diseaseterm.acc_db_cd as diseaseaccdbcd, chemterm.nm as chemnm, chemterm.nm_html as chemnmhtml, chemterm.acc_txt as chemacc, geneterm.nm as genesymbol, geneterm.nm_html as genesymbolhtml, geneterm.acc_txt as geneacc, count(*) over () fullrowcount from phenotype_term_reference viachemptr, phenotype_term_reference viageneptr, term phenotypeterm, term diseaseterm, term geneterm, term chemterm where viachemptr.via_term_id in ( select baseterm.id from term baseterm where baseterm.object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?)) and viageneptr.via_term_id in ( select baseterm.id from term baseterm where baseterm.object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?)) and viachemptr.phenotype_id = phenotypeterm.id and viachemptr.term_object_type_id = ? and viachemptr.term_id = diseaseterm.id and viachemptr.via_term_object_type_id = ? and viachemptr.via_term_id = chemterm.id and viachemptr.term_id = viageneptr.term_id and viachemptr.phenotype_id = viageneptr.phenotype_id and viageneptr.via_term_object_type_id = ? and viageneptr.via_term_id = geneterm.id and exists ( select ? from gene_chem_reference where gene_id = geneterm.id and chem_id = chemterm.id) group by phenotypeterm.nm, phenotypeterm.nm_html, phenotypeterm.acc_txt, diseaseterm.nm, diseaseterm.nm_html, diseaseterm.acc_txt, diseaseterm.acc_db_cd, chemterm.nm, chemterm.nm_html, chemterm.acc_txt, geneterm.nm, geneterm.nm_html, geneterm.acc_txt order by chemterm.nm limit ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Oct 09 08 103 14m22s 8s369ms [ User: pubeu - Total duration: 5m8s - Times executed: 24 ]
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select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'CISPLATIN' AND tl.object_type_id = 2)) and viaGenePTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'TNF' AND tl.object_type_id = 4)) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-10-09 08:52:30 Duration: 24s206ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'CISPLATIN' AND tl.object_type_id = 2)) and viaGenePTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'IL1B' AND tl.object_type_id = 4)) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-10-09 08:54:03 Duration: 23s466ms Bind query: yes
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select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'CISPLATIN' AND tl.object_type_id = 2)) and viaGenePTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'PTGS2' AND tl.object_type_id = 4)) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-10-09 08:58:38 Duration: 23s40ms Database: ctdprd51 User: pubeu Bind query: yes
16 14m18s 25 33s793ms 35s157ms 34s341ms copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Oct 06 06 1 34s272ms 34s272ms 10 1 34s353ms 34s353ms 14 1 34s354ms 34s354ms 18 1 34s238ms 34s238ms Oct 07 06 1 34s284ms 34s284ms 10 1 34s170ms 34s170ms 14 1 34s292ms 34s292ms 18 1 34s279ms 34s279ms Oct 08 06 1 34s221ms 34s221ms 10 1 35s157ms 35s157ms 14 1 34s549ms 34s549ms 18 1 34s204ms 34s204ms Oct 09 06 1 34s332ms 34s332ms 10 1 34s336ms 34s336ms 14 1 34s386ms 34s386ms 18 1 34s188ms 34s188ms Oct 10 06 1 34s677ms 34s677ms 10 1 34s466ms 34s466ms 14 1 34s381ms 34s381ms 18 1 34s286ms 34s286ms Oct 11 06 1 34s321ms 34s321ms 10 1 34s250ms 34s250ms 14 1 34s399ms 34s399ms 18 1 34s329ms 34s329ms Oct 12 19 1 33s793ms 33s793ms [ User: postgres - Total duration: 13m44s - Times executed: 24 ]
[ Application: pg_dump - Total duration: 13m44s - Times executed: 24 ]
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-10-08 10:05:36 Duration: 35s157ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-10-10 06:05:36 Duration: 34s677ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-10-08 14:05:36 Duration: 34s549ms Database: ctdprd51 User: postgres Application: pg_dump
17 12m1s 168 1s2ms 6s161ms 4s292ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Oct 06 00 1 1s23ms 1s23ms 01 7 28s941ms 4s134ms 02 1 5s309ms 5s309ms 03 1 5s104ms 5s104ms 05 1 5s289ms 5s289ms 06 1 5s423ms 5s423ms 07 2 2s64ms 1s32ms 11 3 15s969ms 5s323ms 13 1 1s2ms 1s2ms 14 2 10s996ms 5s498ms 15 1 5s252ms 5s252ms 18 1 5s182ms 5s182ms 21 1 1s21ms 1s21ms Oct 07 02 1 5s239ms 5s239ms 03 1 5s338ms 5s338ms 05 2 6s326ms 3s163ms 06 1 1s19ms 1s19ms 10 1 5s124ms 5s124ms 16 1 5s473ms 5s473ms 21 2 10s712ms 5s356ms 23 1 5s220ms 5s220ms Oct 08 00 1 5s60ms 5s60ms 01 7 36s746ms 5s249ms 02 1 1s18ms 1s18ms 03 2 10s602ms 5s301ms 04 1 5s34ms 5s34ms 10 1 5s158ms 5s158ms 12 1 5s403ms 5s403ms 13 1 5s344ms 5s344ms 18 1 1s10ms 1s10ms 22 6 28s293ms 4s715ms Oct 09 03 2 6s166ms 3s83ms 04 1 5s502ms 5s502ms 05 4 12s946ms 3s236ms 06 17 1m28s 5s209ms 10 1 5s443ms 5s443ms 11 1 6s85ms 6s85ms 12 1 1s18ms 1s18ms 13 1 1s33ms 1s33ms 14 1 1s35ms 1s35ms 16 4 21s967ms 5s491ms 19 1 1s8ms 1s8ms 20 2 10s648ms 5s324ms 21 1 5s485ms 5s485ms 22 2 6s192ms 3s96ms 23 3 11s639ms 3s879ms Oct 10 00 3 11s271ms 3s757ms 03 2 6s363ms 3s181ms 06 1 1s8ms 1s8ms 07 9 38s941ms 4s326ms 08 10 45s911ms 4s591ms 10 1 5s754ms 5s754ms 11 2 2s17ms 1s8ms 13 2 10s647ms 5s323ms 14 1 5s119ms 5s119ms 15 1 5s328ms 5s328ms Oct 11 03 1 1s7ms 1s7ms 04 1 6s26ms 6s26ms 06 1 5s163ms 5s163ms 07 1 5s131ms 5s131ms 08 2 10s733ms 5s366ms 10 1 5s231ms 5s231ms 11 1 5s185ms 5s185ms 15 1 5s256ms 5s256ms 18 1 5s262ms 5s262ms Oct 12 01 1 5s226ms 5s226ms 03 4 12s661ms 3s165ms 05 2 10s534ms 5s267ms 06 2 6s484ms 3s242ms 07 2 6s298ms 3s149ms 08 4 12s813ms 3s203ms 09 1 5s168ms 5s168ms 12 3 15s563ms 5s187ms 13 1 5s205ms 5s205ms 14 3 7s238ms 2s412ms 15 1 5s81ms 5s81ms 17 1 5s217ms 5s217ms 21 2 10s497ms 5s248ms 23 2 6s301ms 3s150ms [ User: pubeu - Total duration: 4m23s - Times executed: 60 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1404739' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-10-10 08:53:57 Duration: 6s161ms Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1326823' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-10-09 11:21:26 Duration: 6s85ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1430593' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-10-11 04:29:03 Duration: 6s26ms Database: ctdprd51 User: pubeu Bind query: yes
18 10m46s 1 10m46s 10m46s 10m46s select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id where gcr.gene_id = any (array (( select gi.id gene_id from term gi where gi.object_type_id = ? and upper(gi.nm) like ?) intersect ( select ai.gene_id from dag_path pi inner join gene_go_annot ai on pi.descendant_object_id = ai.go_term_id inner join db_link dbli on dbli.object_id = pi.ancestor_object_id where dbli.acc_txt = ? and dbli.type_cd = ? and dbli.object_type_id = ?) intersect ( select tp.term_id from term_pathway tp where tp.object_type_id = ? and upper(tp.pathway_acc_txt) = ? and tp.pathway_acc_db_cd = ?))) and gcr.chem_id = any (array ( select dp.descendant_object_id from dag_path dp inner join term t on t.id = dp.ancestor_object_id where upper(t.nm) like ? and t.object_type_id = ?)) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?)) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by c.nm_sort, g.nm_sort, i.sort_txt limit ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Oct 11 10 1 10m46s 10m46s [ User: pubeu - Total duration: 10m46s - Times executed: 1 ]
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CFTR') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'R-HSA-390466' AND tp.pathway_acc_db_cd = 'REACT'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'LUMACAFTOR' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2024-10-11 10:40:55 Duration: 10m46s Database: ctdprd51 User: pubeu Bind query: yes
19 10m22s 75 1s296ms 11s474ms 8s293ms select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Oct 06 05 4 35s113ms 8s778ms 07 4 35s261ms 8s815ms 11 1 5s613ms 5s613ms Oct 07 01 4 35s115ms 8s778ms 13 4 35s848ms 8s962ms 16 4 35s513ms 8s878ms 20 2 17s458ms 8s729ms Oct 08 20 4 35s668ms 8s917ms Oct 09 02 1 1s944ms 1s944ms 07 2 17s606ms 8s803ms 13 1 11s474ms 11s474ms Oct 10 06 8 1m10s 8s811ms 12 4 34s532ms 8s633ms Oct 11 07 4 35s36ms 8s759ms 13 4 35s179ms 8s794ms 23 4 35s150ms 8s787ms Oct 12 00 4 34s823ms 8s705ms 01 4 34s611ms 8s652ms 13 4 35s132ms 8s783ms 14 4 5s263ms 1s315ms 18 4 35s198ms 8s799ms [ User: pubeu - Total duration: 4m40s - Times executed: 32 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1241675') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;
Date: 2024-10-09 13:37:38 Duration: 11s474ms Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;
Date: 2024-10-07 13:44:09 Duration: 9s216ms Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;
Date: 2024-10-08 20:06:49 Duration: 9s88ms Bind query: yes
20 8m51s 465 1s51ms 1s214ms 1s142ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where exposuremarkerterm.id = ? or receptorterm.id = ? group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Oct 06 00 8 9s513ms 1s189ms 03 6 7s71ms 1s178ms 04 4 4s627ms 1s156ms 06 1 1s138ms 1s138ms 08 3 3s497ms 1s165ms 09 2 2s334ms 1s167ms 10 2 2s315ms 1s157ms 11 1 1s161ms 1s161ms 12 1 1s173ms 1s173ms 13 2 2s315ms 1s157ms 14 4 4s501ms 1s125ms 15 5 5s708ms 1s141ms 16 2 2s293ms 1s146ms 17 1 1s159ms 1s159ms 19 2 2s284ms 1s142ms 20 4 4s600ms 1s150ms 22 1 1s190ms 1s190ms 23 3 3s505ms 1s168ms Oct 07 00 4 4s659ms 1s164ms 01 4 4s546ms 1s136ms 02 1 1s126ms 1s126ms 03 9 10s515ms 1s168ms 04 10 11s466ms 1s146ms 05 4 4s442ms 1s110ms 06 1 1s139ms 1s139ms 08 10 11s399ms 1s139ms 10 4 4s536ms 1s134ms 13 5 5s889ms 1s177ms 15 1 1s181ms 1s181ms 16 1 1s103ms 1s103ms 22 8 9s372ms 1s171ms 23 6 7s75ms 1s179ms Oct 08 00 8 9s245ms 1s155ms 01 1 1s106ms 1s106ms 03 8 9s343ms 1s167ms 04 4 4s726ms 1s181ms 06 1 1s181ms 1s181ms 07 5 5s678ms 1s135ms 09 4 4s513ms 1s128ms 10 8 9s80ms 1s135ms 13 3 3s450ms 1s150ms 14 7 8s24ms 1s146ms 15 1 1s132ms 1s132ms 16 1 1s143ms 1s143ms 18 1 1s115ms 1s115ms 22 1 1s198ms 1s198ms 23 7 8s116ms 1s159ms Oct 09 05 6 6s932ms 1s155ms 06 3 3s373ms 1s124ms 07 1 1s87ms 1s87ms 08 1 1s158ms 1s158ms 13 4 4s591ms 1s147ms 14 6 6s781ms 1s130ms 15 2 2s273ms 1s136ms 16 1 1s153ms 1s153ms 17 4 4s612ms 1s153ms 19 2 2s320ms 1s160ms 21 1 1s86ms 1s86ms 22 1 1s166ms 1s166ms 23 1 1s150ms 1s150ms Oct 10 00 4 4s637ms 1s159ms 02 1 1s110ms 1s110ms 03 1 1s162ms 1s162ms 04 5 5s630ms 1s126ms 08 4 4s485ms 1s121ms 09 5 5s609ms 1s121ms 10 5 5s590ms 1s118ms 11 1 1s132ms 1s132ms 12 14 15s990ms 1s142ms 13 6 6s838ms 1s139ms 14 4 4s571ms 1s142ms 16 4 4s588ms 1s147ms 17 4 4s626ms 1s156ms 18 3 3s480ms 1s160ms 19 10 11s245ms 1s124ms 21 1 1s80ms 1s80ms 22 4 4s622ms 1s155ms Oct 11 00 6 6s682ms 1s113ms 01 2 2s281ms 1s140ms 02 9 10s327ms 1s147ms 03 1 1s110ms 1s110ms 04 6 6s988ms 1s164ms 05 1 1s109ms 1s109ms 06 12 13s642ms 1s136ms 07 1 1s121ms 1s121ms 09 3 3s403ms 1s134ms 10 4 4s528ms 1s132ms 12 7 7s964ms 1s137ms 14 9 10s184ms 1s131ms 16 3 3s374ms 1s124ms 18 5 5s531ms 1s106ms 19 4 4s446ms 1s111ms 20 15 16s713ms 1s114ms 21 9 10s120ms 1s124ms Oct 12 00 6 6s885ms 1s147ms 01 9 10s202ms 1s133ms 02 1 1s143ms 1s143ms 03 4 4s584ms 1s146ms 04 6 6s856ms 1s142ms 05 1 1s94ms 1s94ms 07 1 1s148ms 1s148ms 08 1 1s90ms 1s90ms 09 9 10s240ms 1s137ms 10 5 5s657ms 1s131ms 11 2 2s283ms 1s141ms 12 4 4s544ms 1s136ms 13 9 10s236ms 1s137ms 14 1 1s158ms 1s158ms 16 4 4s525ms 1s131ms 18 3 3s355ms 1s118ms 19 7 7s890ms 1s127ms 20 4 4s596ms 1s149ms 22 1 1s211ms 1s211ms 23 1 1s155ms 1s155ms [ User: pubeu - Total duration: 58s508ms - Times executed: 51 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1636860' or receptorTerm.id = '1636860' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort;
Date: 2024-10-12 09:06:44 Duration: 1s214ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1439822' or receptorTerm.id = '1439822' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort;
Date: 2024-10-07 22:43:08 Duration: 1s211ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1459519' or receptorTerm.id = '1459519' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort;
Date: 2024-10-12 22:29:48 Duration: 1s211ms Database: ctdprd51 User: pubeu Bind query: yes
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 1,239 29m11s 1s389ms 1s683ms 1s413ms select coalesce(d.abbr_display, d.nm_display) nm # ?, d.description # ?, coalesce(d.abbr, d.nm) anchor # ?, get_homepage_url (d.id) url # ? from db d # ? where d.id in (# ? select l.db_id # ? from db_link l # ? where l.type_cd = ? # ? and l.object_type_id = ?) # ? order by ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Oct 06 00 7 9s890ms 1s412ms 01 12 16s891ms 1s407ms 02 4 5s669ms 1s417ms 03 7 9s904ms 1s414ms 04 8 11s255ms 1s406ms 05 8 11s335ms 1s416ms 06 8 11s300ms 1s412ms 07 1 1s397ms 1s397ms 08 8 11s316ms 1s414ms 09 12 17s10ms 1s417ms 10 11 15s548ms 1s413ms 11 4 5s637ms 1s409ms 12 3 4s249ms 1s416ms 13 8 11s275ms 1s409ms 14 13 18s407ms 1s415ms 15 5 7s56ms 1s411ms 16 6 8s447ms 1s407ms 17 5 7s38ms 1s407ms 18 9 12s765ms 1s418ms 19 7 9s884ms 1s412ms 20 4 5s595ms 1s398ms 21 11 15s516ms 1s410ms 22 5 7s73ms 1s414ms 23 9 12s735ms 1s415ms Oct 07 00 12 16s911ms 1s409ms 01 16 22s612ms 1s413ms 02 16 22s502ms 1s406ms 03 12 16s926ms 1s410ms 04 12 16s932ms 1s411ms 05 6 8s474ms 1s412ms 06 8 11s295ms 1s411ms 07 9 12s689ms 1s409ms 08 8 11s290ms 1s411ms 09 9 12s670ms 1s407ms 10 10 14s178ms 1s417ms 11 8 11s305ms 1s413ms 12 7 9s858ms 1s408ms 13 3 4s276ms 1s425ms 14 10 14s238ms 1s423ms 15 6 8s581ms 1s430ms 16 6 8s482ms 1s413ms 17 1 1s414ms 1s414ms 18 6 8s467ms 1s411ms 19 4 5s669ms 1s417ms 20 3 4s242ms 1s414ms 21 6 8s443ms 1s407ms 22 6 8s591ms 1s431ms 23 11 15s575ms 1s415ms Oct 08 00 8 11s287ms 1s410ms 01 11 15s481ms 1s407ms 02 7 9s893ms 1s413ms 03 11 15s550ms 1s413ms 04 8 11s288ms 1s411ms 05 6 8s500ms 1s416ms 06 1 1s418ms 1s418ms 07 8 11s363ms 1s420ms 08 4 5s652ms 1s413ms 09 5 7s73ms 1s414ms 10 2 2s903ms 1s451ms 11 5 7s86ms 1s417ms 12 6 8s485ms 1s414ms 13 6 8s558ms 1s426ms 14 4 5s663ms 1s415ms 15 10 14s165ms 1s416ms 16 5 7s183ms 1s436ms 17 2 2s953ms 1s476ms 18 4 5s636ms 1s409ms 19 8 11s310ms 1s413ms 20 2 2s844ms 1s422ms 21 2 2s823ms 1s411ms 22 9 12s686ms 1s409ms 23 3 4s240ms 1s413ms Oct 09 00 5 7s21ms 1s404ms 01 1 1s415ms 1s415ms 02 7 9s917ms 1s416ms 03 6 8s458ms 1s409ms 04 1 1s412ms 1s412ms 05 6 8s490ms 1s415ms 06 1 1s437ms 1s437ms 07 3 4s206ms 1s402ms 08 2 2s821ms 1s410ms 09 7 9s920ms 1s417ms 10 5 7s31ms 1s406ms 11 4 5s760ms 1s440ms 12 4 5s675ms 1s418ms 13 5 7s76ms 1s415ms 14 14 19s964ms 1s426ms 15 3 4s249ms 1s416ms 16 3 4s229ms 1s409ms 17 12 16s900ms 1s408ms 18 2 2s820ms 1s410ms 19 9 12s987ms 1s443ms 20 16 22s553ms 1s409ms 21 39 55s60ms 1s411ms 22 21 29s641ms 1s411ms 23 6 8s487ms 1s414ms Oct 10 00 9 12s648ms 1s405ms 01 5 7s188ms 1s437ms 02 8 11s292ms 1s411ms 03 5 7s62ms 1s412ms 04 7 9s893ms 1s413ms 05 4 5s639ms 1s409ms 06 6 8s475ms 1s412ms 07 4 5s645ms 1s411ms 08 4 5s647ms 1s411ms 09 8 11s294ms 1s411ms 10 7 9s837ms 1s405ms 11 5 7s35ms 1s407ms 12 12 16s932ms 1s411ms 13 4 5s655ms 1s413ms 14 3 4s242ms 1s414ms 15 5 7s63ms 1s412ms 16 3 4s229ms 1s409ms 17 8 11s274ms 1s409ms 18 12 16s923ms 1s410ms 19 4 5s654ms 1s413ms 20 4 5s669ms 1s417ms 21 10 14s161ms 1s416ms 22 11 15s488ms 1s408ms 23 14 19s738ms 1s409ms Oct 11 00 6 8s477ms 1s412ms 01 4 5s656ms 1s414ms 02 8 11s382ms 1s422ms 03 6 8s452ms 1s408ms 04 9 13s19ms 1s446ms 05 9 12s677ms 1s408ms 06 10 14s108ms 1s410ms 07 5 7s50ms 1s410ms 08 8 11s303ms 1s412ms 09 6 8s489ms 1s414ms 10 9 12s671ms 1s407ms 11 1 1s411ms 1s411ms 12 3 4s229ms 1s409ms 13 6 8s540ms 1s423ms 14 11 15s487ms 1s407ms 15 10 14s110ms 1s411ms 16 6 8s500ms 1s416ms 17 5 7s66ms 1s413ms 18 8 11s254ms 1s406ms 19 8 11s275ms 1s409ms 20 9 12s665ms 1s407ms 21 6 8s504ms 1s417ms 22 4 5s614ms 1s403ms 23 3 4s240ms 1s413ms Oct 12 00 14 19s755ms 1s411ms 01 7 9s876ms 1s410ms 02 7 9s881ms 1s411ms 03 5 7s54ms 1s410ms 04 13 18s354ms 1s411ms 05 8 11s279ms 1s409ms 06 8 11s243ms 1s405ms 07 10 14s152ms 1s415ms 08 12 16s987ms 1s415ms 09 11 15s666ms 1s424ms 10 12 16s983ms 1s415ms 11 10 14s91ms 1s409ms 12 10 14s107ms 1s410ms 13 14 19s768ms 1s412ms 14 10 14s62ms 1s406ms 15 8 11s271ms 1s408ms 16 8 11s296ms 1s412ms 17 8 11s416ms 1s427ms 18 11 15s597ms 1s417ms 19 12 17s81ms 1s423ms 20 11 15s572ms 1s415ms 21 6 8s501ms 1s416ms 22 5 7s65ms 1s413ms 23 8 11s305ms 1s413ms [ User: pubeu - Total duration: 13m18s - Times executed: 564 ]
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-10-09 19:42:51 Duration: 1s683ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-10-12 17:17:32 Duration: 1s573ms Bind query: yes
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-10-11 04:16:57 Duration: 1s572ms Database: ctdprd51 User: pubeu Bind query: yes
2 1,124 21m32s 1s46ms 1s299ms 1s150ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where exposuremarkerterm.id = ? or receptorterm.id = ? group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Oct 06 00 10 11s879ms 1s187ms 01 7 8s109ms 1s158ms 02 7 8s238ms 1s176ms 03 8 9s541ms 1s192ms 04 8 9s527ms 1s190ms 05 4 4s877ms 1s219ms 06 11 12s657ms 1s150ms 07 4 4s604ms 1s151ms 08 7 8s74ms 1s153ms 09 7 8s82ms 1s154ms 10 7 8s179ms 1s168ms 11 4 4s578ms 1s144ms 12 5 5s785ms 1s157ms 13 2 2s325ms 1s162ms 14 9 10s283ms 1s142ms 15 8 9s192ms 1s149ms 16 9 10s216ms 1s135ms 17 10 11s452ms 1s145ms 18 4 4s665ms 1s166ms 19 6 6s755ms 1s125ms 20 16 18s456ms 1s153ms 21 3 3s354ms 1s118ms 22 6 7s104ms 1s184ms 23 3 3s513ms 1s171ms Oct 07 00 10 11s598ms 1s159ms 01 3 3s500ms 1s166ms 02 6 7s34ms 1s172ms 03 4 4s663ms 1s165ms 04 8 9s356ms 1s169ms 05 8 9s547ms 1s193ms 06 12 13s881ms 1s156ms 07 10 11s472ms 1s147ms 08 4 4s585ms 1s146ms 09 6 6s909ms 1s151ms 10 5 5s783ms 1s156ms 11 4 4s548ms 1s137ms 12 6 6s894ms 1s149ms 13 7 8s186ms 1s169ms 14 6 7s56ms 1s176ms 15 6 6s879ms 1s146ms 16 4 4s527ms 1s131ms 17 3 3s379ms 1s126ms 18 4 4s578ms 1s144ms 19 5 5s686ms 1s137ms 20 5 5s674ms 1s134ms 21 8 9s33ms 1s129ms 22 16 18s910ms 1s181ms 23 6 7s45ms 1s174ms Oct 08 00 7 8s99ms 1s157ms 01 5 5s784ms 1s156ms 02 6 7s22ms 1s170ms 03 10 11s673ms 1s167ms 04 4 4s709ms 1s177ms 05 3 3s731ms 1s243ms 06 9 10s254ms 1s139ms 07 5 5s725ms 1s145ms 08 5 5s794ms 1s158ms 09 8 9s180ms 1s147ms 10 8 9s239ms 1s154ms 11 9 10s336ms 1s148ms 12 5 5s786ms 1s157ms 13 7 8s18ms 1s145ms 14 9 10s480ms 1s164ms 15 5 5s696ms 1s139ms 16 6 7s107ms 1s184ms 17 7 8s114ms 1s159ms 18 7 7s969ms 1s138ms 19 6 6s802ms 1s133ms 20 2 2s276ms 1s138ms 21 5 5s723ms 1s144ms 22 4 4s676ms 1s169ms 23 5 5s906ms 1s181ms Oct 09 00 6 7s57ms 1s176ms 01 5 5s874ms 1s174ms 02 1 1s165ms 1s165ms 03 5 5s695ms 1s139ms 04 5 5s760ms 1s152ms 05 4 4s805ms 1s201ms 06 2 2s284ms 1s142ms 07 5 5s669ms 1s133ms 08 4 4s609ms 1s152ms 09 1 1s117ms 1s117ms 10 6 6s940ms 1s156ms 11 3 3s472ms 1s157ms 13 9 10s301ms 1s144ms 14 12 13s543ms 1s128ms 15 2 2s311ms 1s155ms 16 6 6s834ms 1s139ms 17 5 5s709ms 1s141ms 18 11 12s475ms 1s134ms 19 4 4s658ms 1s164ms 20 5 5s697ms 1s139ms 21 6 6s826ms 1s137ms 22 4 4s559ms 1s139ms 23 13 15s107ms 1s162ms Oct 10 00 7 7s984ms 1s140ms 01 4 4s561ms 1s140ms 02 4 4s559ms 1s139ms 03 5 5s643ms 1s128ms 04 9 10s279ms 1s142ms 05 7 8s57ms 1s151ms 06 4 4s538ms 1s134ms 07 4 4s606ms 1s151ms 08 2 2s245ms 1s122ms 09 5 5s667ms 1s133ms 10 4 4s585ms 1s146ms 11 5 5s727ms 1s145ms 12 8 9s299ms 1s162ms 13 10 11s405ms 1s140ms 14 10 11s489ms 1s148ms 15 9 10s142ms 1s126ms 16 7 8s268ms 1s181ms 17 5 5s745ms 1s149ms 18 5 5s641ms 1s128ms 19 5 5s721ms 1s144ms 20 3 3s402ms 1s134ms 21 4 4s537ms 1s134ms 22 7 8s218ms 1s174ms 23 4 4s508ms 1s127ms Oct 11 00 8 9s34ms 1s129ms 01 6 6s850ms 1s141ms 02 9 10s190ms 1s132ms 03 6 6s792ms 1s132ms 04 8 9s155ms 1s144ms 05 9 10s515ms 1s168ms 06 8 9s93ms 1s136ms 07 4 4s555ms 1s138ms 08 4 4s604ms 1s151ms 09 2 2s243ms 1s121ms 10 7 7s960ms 1s137ms 11 6 6s862ms 1s143ms 12 6 6s911ms 1s151ms 13 2 2s273ms 1s136ms 14 10 11s433ms 1s143ms 15 7 8s10ms 1s144ms 16 5 5s588ms 1s117ms 17 6 6s926ms 1s154ms 18 12 13s394ms 1s116ms 19 12 13s424ms 1s118ms 20 16 17s800ms 1s112ms 21 12 13s374ms 1s114ms 22 6 6s921ms 1s153ms 23 5 5s726ms 1s145ms Oct 12 00 8 9s324ms 1s165ms 01 5 5s802ms 1s160ms 02 10 11s511ms 1s151ms 03 7 8s30ms 1s147ms 04 9 10s205ms 1s133ms 05 9 10s513ms 1s168ms 06 11 12s571ms 1s142ms 07 13 14s734ms 1s133ms 08 13 14s690ms 1s130ms 09 10 11s398ms 1s139ms 10 11 12s518ms 1s138ms 11 10 11s474ms 1s147ms 12 8 9s139ms 1s142ms 13 8 9s8ms 1s126ms 14 2 2s197ms 1s98ms 15 9 10s357ms 1s150ms 16 4 4s574ms 1s143ms 17 2 2s245ms 1s122ms 18 7 7s956ms 1s136ms 19 11 12s467ms 1s133ms 20 4 4s733ms 1s183ms 21 19 22s236ms 1s170ms 22 15 17s525ms 1s168ms 23 14 16s504ms 1s178ms [ User: pubeu - Total duration: 9m20s - Times executed: 488 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1439394' or receptorTerm.id = '1439394' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-10-07 05:38:41 Duration: 1s299ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '2053645' or receptorTerm.id = '2053645' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-10-12 00:21:32 Duration: 1s290ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1439394' or receptorTerm.id = '1439394' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-10-08 05:43:42 Duration: 1s288ms Bind query: yes
3 465 8m51s 1s51ms 1s214ms 1s142ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where exposuremarkerterm.id = ? or receptorterm.id = ? group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Oct 06 00 8 9s513ms 1s189ms 03 6 7s71ms 1s178ms 04 4 4s627ms 1s156ms 06 1 1s138ms 1s138ms 08 3 3s497ms 1s165ms 09 2 2s334ms 1s167ms 10 2 2s315ms 1s157ms 11 1 1s161ms 1s161ms 12 1 1s173ms 1s173ms 13 2 2s315ms 1s157ms 14 4 4s501ms 1s125ms 15 5 5s708ms 1s141ms 16 2 2s293ms 1s146ms 17 1 1s159ms 1s159ms 19 2 2s284ms 1s142ms 20 4 4s600ms 1s150ms 22 1 1s190ms 1s190ms 23 3 3s505ms 1s168ms Oct 07 00 4 4s659ms 1s164ms 01 4 4s546ms 1s136ms 02 1 1s126ms 1s126ms 03 9 10s515ms 1s168ms 04 10 11s466ms 1s146ms 05 4 4s442ms 1s110ms 06 1 1s139ms 1s139ms 08 10 11s399ms 1s139ms 10 4 4s536ms 1s134ms 13 5 5s889ms 1s177ms 15 1 1s181ms 1s181ms 16 1 1s103ms 1s103ms 22 8 9s372ms 1s171ms 23 6 7s75ms 1s179ms Oct 08 00 8 9s245ms 1s155ms 01 1 1s106ms 1s106ms 03 8 9s343ms 1s167ms 04 4 4s726ms 1s181ms 06 1 1s181ms 1s181ms 07 5 5s678ms 1s135ms 09 4 4s513ms 1s128ms 10 8 9s80ms 1s135ms 13 3 3s450ms 1s150ms 14 7 8s24ms 1s146ms 15 1 1s132ms 1s132ms 16 1 1s143ms 1s143ms 18 1 1s115ms 1s115ms 22 1 1s198ms 1s198ms 23 7 8s116ms 1s159ms Oct 09 05 6 6s932ms 1s155ms 06 3 3s373ms 1s124ms 07 1 1s87ms 1s87ms 08 1 1s158ms 1s158ms 13 4 4s591ms 1s147ms 14 6 6s781ms 1s130ms 15 2 2s273ms 1s136ms 16 1 1s153ms 1s153ms 17 4 4s612ms 1s153ms 19 2 2s320ms 1s160ms 21 1 1s86ms 1s86ms 22 1 1s166ms 1s166ms 23 1 1s150ms 1s150ms Oct 10 00 4 4s637ms 1s159ms 02 1 1s110ms 1s110ms 03 1 1s162ms 1s162ms 04 5 5s630ms 1s126ms 08 4 4s485ms 1s121ms 09 5 5s609ms 1s121ms 10 5 5s590ms 1s118ms 11 1 1s132ms 1s132ms 12 14 15s990ms 1s142ms 13 6 6s838ms 1s139ms 14 4 4s571ms 1s142ms 16 4 4s588ms 1s147ms 17 4 4s626ms 1s156ms 18 3 3s480ms 1s160ms 19 10 11s245ms 1s124ms 21 1 1s80ms 1s80ms 22 4 4s622ms 1s155ms Oct 11 00 6 6s682ms 1s113ms 01 2 2s281ms 1s140ms 02 9 10s327ms 1s147ms 03 1 1s110ms 1s110ms 04 6 6s988ms 1s164ms 05 1 1s109ms 1s109ms 06 12 13s642ms 1s136ms 07 1 1s121ms 1s121ms 09 3 3s403ms 1s134ms 10 4 4s528ms 1s132ms 12 7 7s964ms 1s137ms 14 9 10s184ms 1s131ms 16 3 3s374ms 1s124ms 18 5 5s531ms 1s106ms 19 4 4s446ms 1s111ms 20 15 16s713ms 1s114ms 21 9 10s120ms 1s124ms Oct 12 00 6 6s885ms 1s147ms 01 9 10s202ms 1s133ms 02 1 1s143ms 1s143ms 03 4 4s584ms 1s146ms 04 6 6s856ms 1s142ms 05 1 1s94ms 1s94ms 07 1 1s148ms 1s148ms 08 1 1s90ms 1s90ms 09 9 10s240ms 1s137ms 10 5 5s657ms 1s131ms 11 2 2s283ms 1s141ms 12 4 4s544ms 1s136ms 13 9 10s236ms 1s137ms 14 1 1s158ms 1s158ms 16 4 4s525ms 1s131ms 18 3 3s355ms 1s118ms 19 7 7s890ms 1s127ms 20 4 4s596ms 1s149ms 22 1 1s211ms 1s211ms 23 1 1s155ms 1s155ms [ User: pubeu - Total duration: 58s508ms - Times executed: 51 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1636860' or receptorTerm.id = '1636860' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort;
Date: 2024-10-12 09:06:44 Duration: 1s214ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1439822' or receptorTerm.id = '1439822' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort;
Date: 2024-10-07 22:43:08 Duration: 1s211ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1459519' or receptorTerm.id = '1459519' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort;
Date: 2024-10-12 22:29:48 Duration: 1s211ms Database: ctdprd51 User: pubeu Bind query: yes
4 391 26m4s 3s786ms 6s282ms 4s select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Oct 06 00 11 43s782ms 3s980ms 01 5 20s251ms 4s50ms 02 7 27s613ms 3s944ms 04 1 4s133ms 4s133ms 06 1 4s115ms 4s115ms 07 1 3s842ms 3s842ms 08 1 3s899ms 3s899ms 09 1 3s789ms 3s789ms 10 1 3s806ms 3s806ms 11 2 7s934ms 3s967ms 12 1 3s820ms 3s820ms 13 12 47s734ms 3s977ms 14 22 1m28s 4s4ms 15 21 1m23s 3s980ms 16 3 12s109ms 4s36ms 17 5 19s765ms 3s953ms 18 5 19s881ms 3s976ms 19 3 11s536ms 3s845ms 20 7 28s26ms 4s3ms 21 12 49s195ms 4s99ms 22 3 12s107ms 4s35ms 23 1 3s882ms 3s882ms Oct 07 00 2 7s951ms 3s975ms 01 1 3s961ms 3s961ms 02 2 8s462ms 4s231ms 03 1 3s884ms 3s884ms 04 2 8s544ms 4s272ms 05 4 15s786ms 3s946ms 07 1 3s941ms 3s941ms 08 3 11s642ms 3s880ms 09 3 12s233ms 4s77ms 12 2 7s819ms 3s909ms 13 1 3s829ms 3s829ms 17 2 7s998ms 3s999ms 18 1 4s380ms 4s380ms 21 1 4s17ms 4s17ms 23 10 39s611ms 3s961ms Oct 08 00 3 11s917ms 3s972ms 02 3 12s432ms 4s144ms 03 2 7s904ms 3s952ms 04 3 11s958ms 3s986ms 05 1 3s899ms 3s899ms 06 4 16s29ms 4s7ms 08 1 4s78ms 4s78ms 09 1 3s943ms 3s943ms 16 3 12s247ms 4s82ms 17 1 3s866ms 3s866ms 18 3 12s198ms 4s66ms 19 8 31s713ms 3s964ms 20 9 35s872ms 3s985ms 21 1 3s964ms 3s964ms 22 10 39s857ms 3s985ms 23 1 3s911ms 3s911ms Oct 09 00 6 23s819ms 3s969ms 01 15 1m 4s13ms 02 1 3s997ms 3s997ms 04 8 31s704ms 3s963ms 05 7 27s413ms 3s916ms 06 2 7s939ms 3s969ms 07 1 3s985ms 3s985ms 08 4 16s30ms 4s7ms 09 4 15s911ms 3s977ms 10 4 16s329ms 4s82ms 11 2 8s479ms 4s239ms 12 4 16s359ms 4s89ms 13 2 8s391ms 4s195ms 15 1 3s999ms 3s999ms 16 2 7s987ms 3s993ms 17 3 11s844ms 3s948ms 19 1 3s874ms 3s874ms 20 1 4s72ms 4s72ms 22 1 3s872ms 3s872ms 23 3 12s121ms 4s40ms Oct 10 00 2 7s716ms 3s858ms 01 1 4s86ms 4s86ms 02 3 11s875ms 3s958ms 03 3 12s315ms 4s105ms 04 1 4s182ms 4s182ms 05 1 4s163ms 4s163ms 07 1 3s971ms 3s971ms 08 5 19s764ms 3s952ms 10 1 4s55ms 4s55ms 11 8 31s446ms 3s930ms 12 2 8s165ms 4s82ms 13 6 23s698ms 3s949ms 15 2 7s862ms 3s931ms 17 1 3s988ms 3s988ms 18 3 12s701ms 4s233ms 19 4 16s820ms 4s205ms 21 3 11s800ms 3s933ms 22 1 4s57ms 4s57ms Oct 11 00 5 19s722ms 3s944ms 01 1 4s32ms 4s32ms 02 1 3s985ms 3s985ms 03 5 19s827ms 3s965ms 04 1 3s871ms 3s871ms 05 1 3s967ms 3s967ms 06 4 15s939ms 3s984ms 08 6 26s536ms 4s422ms 09 1 3s905ms 3s905ms 10 1 4s280ms 4s280ms 11 1 3s992ms 3s992ms 15 5 19s617ms 3s923ms 16 1 4s23ms 4s23ms 17 3 11s872ms 3s957ms 18 2 7s861ms 3s930ms 20 1 3s942ms 3s942ms Oct 12 04 2 8s111ms 4s55ms 07 3 11s829ms 3s943ms 09 3 11s887ms 3s962ms 11 2 7s673ms 3s836ms 12 1 3s912ms 3s912ms 13 1 4s9ms 4s9ms 15 1 3s907ms 3s907ms 16 1 3s895ms 3s895ms 22 2 7s778ms 3s889ms [ User: pubeu - Total duration: 10m27s - Times executed: 157 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1263173') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1263173') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-10-11 08:23:28 Duration: 6s282ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1263172') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1263172') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-10-06 21:18:02 Duration: 5s222ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1263172') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1263172') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-10-10 19:40:54 Duration: 5s150ms Database: ctdprd51 User: pubeu Bind query: yes
5 310 6m30s 1s161ms 1s744ms 1s260ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or receptorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Oct 06 00 1 1s226ms 1s226ms 01 1 1s302ms 1s302ms 02 3 3s743ms 1s247ms 03 2 2s586ms 1s293ms 04 4 5s50ms 1s262ms 05 5 6s610ms 1s322ms 06 2 2s402ms 1s201ms 07 1 1s236ms 1s236ms 08 2 2s556ms 1s278ms 09 4 5s39ms 1s259ms 11 1 1s275ms 1s275ms 12 5 6s326ms 1s265ms 13 2 2s458ms 1s229ms 14 1 1s281ms 1s281ms 15 1 1s257ms 1s257ms 16 7 8s633ms 1s233ms 17 3 3s709ms 1s236ms 18 3 3s725ms 1s241ms 19 4 4s912ms 1s228ms 20 2 2s502ms 1s251ms 21 1 1s215ms 1s215ms 22 4 5s193ms 1s298ms 23 2 2s598ms 1s299ms Oct 07 00 1 1s524ms 1s524ms 01 1 1s219ms 1s219ms 03 3 3s638ms 1s212ms 04 1 1s235ms 1s235ms 05 6 7s884ms 1s314ms 06 3 3s639ms 1s213ms 08 3 3s743ms 1s247ms 09 6 7s599ms 1s266ms 10 5 6s282ms 1s256ms 11 2 2s463ms 1s231ms 12 3 3s717ms 1s239ms 14 1 1s214ms 1s214ms 16 3 3s738ms 1s246ms 17 2 2s521ms 1s260ms 18 1 1s247ms 1s247ms 19 2 2s440ms 1s220ms 21 2 2s403ms 1s201ms 22 3 3s852ms 1s284ms 23 1 1s276ms 1s276ms Oct 08 00 3 3s792ms 1s264ms 02 3 3s704ms 1s234ms 03 4 4s979ms 1s244ms 04 3 3s771ms 1s257ms 05 3 4s48ms 1s349ms 06 2 2s637ms 1s318ms 07 2 2s517ms 1s258ms 09 1 1s232ms 1s232ms 10 3 3s777ms 1s259ms 11 1 1s279ms 1s279ms 12 2 2s508ms 1s254ms 13 2 2s714ms 1s357ms 16 2 2s528ms 1s264ms 17 1 1s254ms 1s254ms 19 8 9s880ms 1s235ms 21 1 1s270ms 1s270ms 22 2 2s516ms 1s258ms 23 5 6s510ms 1s302ms Oct 09 00 5 6s365ms 1s273ms 01 4 4s970ms 1s242ms 02 1 1s284ms 1s284ms 05 2 2s642ms 1s321ms 06 1 1s241ms 1s241ms 07 1 1s291ms 1s291ms 09 2 2s505ms 1s252ms 12 3 3s786ms 1s262ms 13 3 3s722ms 1s240ms 14 3 3s774ms 1s258ms 15 2 2s513ms 1s256ms 16 2 2s502ms 1s251ms 18 1 1s234ms 1s234ms 19 2 2s485ms 1s242ms 20 1 1s267ms 1s267ms 21 1 1s264ms 1s264ms Oct 10 00 2 2s443ms 1s221ms 02 2 2s994ms 1s497ms 03 2 2s460ms 1s230ms 04 4 4s947ms 1s236ms 05 5 6s469ms 1s293ms 06 3 3s866ms 1s288ms 07 3 3s665ms 1s221ms 08 1 1s214ms 1s214ms 09 1 1s262ms 1s262ms 10 2 2s395ms 1s197ms 11 2 2s409ms 1s204ms 12 1 1s288ms 1s288ms 14 2 2s471ms 1s235ms 17 2 2s478ms 1s239ms 18 1 1s239ms 1s239ms 19 1 1s247ms 1s247ms 21 2 2s500ms 1s250ms 22 2 2s464ms 1s232ms 23 2 2s428ms 1s214ms Oct 11 00 2 2s489ms 1s244ms 02 1 1s186ms 1s186ms 03 2 2s486ms 1s243ms 04 1 1s260ms 1s260ms 05 3 3s909ms 1s303ms 06 1 1s484ms 1s484ms 08 1 1s218ms 1s218ms 10 1 1s210ms 1s210ms 12 2 2s564ms 1s282ms 13 2 2s435ms 1s217ms 15 3 3s673ms 1s224ms 16 2 2s440ms 1s220ms 17 1 1s244ms 1s244ms 18 1 1s231ms 1s231ms 19 2 2s455ms 1s227ms 20 1 1s254ms 1s254ms 21 2 2s446ms 1s223ms 22 5 6s181ms 1s236ms Oct 12 00 1 1s263ms 1s263ms 01 1 1s258ms 1s258ms 02 2 2s473ms 1s236ms 03 1 1s192ms 1s192ms 04 2 2s500ms 1s250ms 05 3 4s133ms 1s377ms 07 4 4s919ms 1s229ms 08 2 2s440ms 1s220ms 09 1 1s248ms 1s248ms 10 1 1s278ms 1s278ms 11 2 2s508ms 1s254ms 12 1 1s260ms 1s260ms 14 2 2s518ms 1s259ms 15 1 1s249ms 1s249ms 16 1 1s177ms 1s177ms 17 1 1s233ms 1s233ms 18 3 3s772ms 1s257ms 19 1 1s294ms 1s294ms 21 5 6s401ms 1s280ms 22 8 10s364ms 1s295ms 23 2 2s537ms 1s268ms [ User: pubeu - Total duration: 3m - Times executed: 144 ]
[ User: qaeu - Total duration: 8s260ms - Times executed: 6 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1237199') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1237199') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-10-10 02:37:31 Duration: 1s744ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1232376') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1232376') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-10-07 00:20:02 Duration: 1s524ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1232376') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1232376') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-10-11 06:10:19 Duration: 1s484ms Bind query: yes
6 278 32m17s 6s691ms 7s258ms 6s967ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?))) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Oct 07 13 55 6m23s 6s969ms 14 80 9m17s 6s964ms Oct 09 10 69 8m 6s959ms 11 74 8m36s 6s977ms [ User: pubeu - Total duration: 9m3s - Times executed: 78 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'BISPHENOL A' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-09 10:36:06 Duration: 7s258ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'LIPOPOLYSACCHARIDES' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-09 11:40:19 Duration: 7s157ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'ACETAMINOPHEN' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-07 14:17:14 Duration: 7s132ms Bind query: yes
7 277 21m51s 1s394ms 14s523ms 4s736ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?))) and taxonterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?))) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Oct 07 13 46 3m32s 4s610ms 14 83 6m35s 4s762ms 15 8 37s354ms 4s669ms Oct 09 10 56 4m27s 4s771ms 11 84 6m40s 4s762ms [ User: pubeu - Total duration: 6m11s - Times executed: 67 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'BISPHENOL A' AND tl.object_type_id = 2))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'SUS SCROFA' AND tl.object_type_id = 1))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-09 10:38:16 Duration: 14s523ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = '(6-(4-(2-PIPERIDIN-1-YLETHOXY)PHENYL))-3-PYRIDIN-4-YLPYRAZOLO(1,5-A)PYRIMIDINE' AND tl.object_type_id = 2))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'SUS SCROFA' AND tl.object_type_id = 1))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-09 10:54:21 Duration: 14s520ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = '(6-(4-(2-PIPERIDIN-1-YLETHOXY)PHENYL))-3-PYRIDIN-4-YLPYRAZOLO(1,5-A)PYRIMIDINE' AND tl.object_type_id = 2))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'PIMEPHALES PROMELAS' AND tl.object_type_id = 1))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-07 14:05:25 Duration: 14s519ms Bind query: yes
8 264 7m12s 1s 6s453ms 1s639ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where associatedterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Oct 06 15 2 2s5ms 1s2ms Oct 07 18 4 5s926ms 1s481ms 20 3 4s275ms 1s425ms 21 8 16s405ms 2s50ms 22 1 6s453ms 6s453ms Oct 08 09 1 1s732ms 1s732ms 10 10 29s293ms 2s929ms 12 1 1s766ms 1s766ms 16 7 11s569ms 1s652ms 21 19 27s538ms 1s449ms 22 1 1s76ms 1s76ms 23 1 1s47ms 1s47ms Oct 09 00 9 15s220ms 1s691ms 01 9 13s711ms 1s523ms 02 12 18s885ms 1s573ms 19 4 5s760ms 1s440ms Oct 10 00 4 5s728ms 1s432ms 01 22 35s862ms 1s630ms 02 16 25s921ms 1s620ms 03 4 5s761ms 1s440ms 04 8 13s233ms 1s654ms 05 1 1s457ms 1s457ms 08 21 30s587ms 1s456ms 09 1 1s57ms 1s57ms 11 4 5s695ms 1s423ms 14 1 6s370ms 6s370ms 16 2 2s837ms 1s418ms Oct 11 04 3 3s232ms 1s77ms 05 1 1s142ms 1s142ms 06 3 4s280ms 1s426ms 07 3 5s303ms 1s767ms 09 4 5s837ms 1s459ms 10 4 7s49ms 1s762ms 11 8 11s383ms 1s422ms 12 15 24s874ms 1s658ms 17 5 8s886ms 1s777ms 18 8 12s674ms 1s584ms Oct 12 17 14 18s496ms 1s321ms 18 4 5s669ms 1s417ms 20 4 5s775ms 1s443ms 21 12 20s912ms 1s742ms [ User: pubeu - Total duration: 2m35s - Times executed: 95 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1395038'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort;
Date: 2024-10-07 22:32:50 Duration: 6s453ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1395038'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort;
Date: 2024-10-08 10:09:18 Duration: 6s431ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1395038'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort;
Date: 2024-10-10 14:18:51 Duration: 6s370ms Bind query: yes
9 253 29m29s 6s734ms 7s357ms 6s992ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?)))) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Oct 07 13 41 4m45s 6s967ms 14 69 8m2s 6s998ms 15 9 1m3s 7s46ms Oct 09 10 50 5m49s 6s995ms 11 84 9m47s 6s993ms [ User: pubeu - Total duration: 8m3s - Times executed: 69 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'CISPLATIN' AND tl.object_type_id = 2))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'EPITHELIAL CELLS' AND tl.object_type_id = 10)))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-07 15:03:46 Duration: 7s357ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'BENZO(A)PYRENE' AND tl.object_type_id = 2))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'KIDNEY' AND tl.object_type_id = 10)))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-07 14:00:26 Duration: 7s178ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'ESTRADIOL' AND tl.object_type_id = 2))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'HEP G2 CELLS' AND tl.object_type_id = 10)))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-07 14:48:34 Duration: 7s172ms Bind query: yes
10 213 4m34s 1s154ms 1s691ms 1s286ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or receptorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Oct 06 01 4 5s258ms 1s314ms 02 1 1s302ms 1s302ms 03 5 6s555ms 1s311ms 05 5 6s796ms 1s359ms 06 2 2s551ms 1s275ms 07 2 2s507ms 1s253ms 08 2 2s551ms 1s275ms 13 2 2s582ms 1s291ms 14 1 1s234ms 1s234ms 16 4 5s108ms 1s277ms 18 2 2s571ms 1s285ms 19 1 1s247ms 1s247ms 20 2 2s563ms 1s281ms 21 1 1s195ms 1s195ms 22 5 6s651ms 1s330ms Oct 07 00 1 1s250ms 1s250ms 04 1 1s226ms 1s226ms 05 7 9s212ms 1s316ms 07 2 2s512ms 1s256ms 08 2 2s748ms 1s374ms 09 1 1s270ms 1s270ms 10 1 1s263ms 1s263ms 12 1 1s261ms 1s261ms 13 1 1s261ms 1s261ms 14 1 1s333ms 1s333ms 15 4 5s101ms 1s275ms 16 3 4s52ms 1s350ms 18 1 1s287ms 1s287ms 19 1 1s470ms 1s470ms 20 2 2s517ms 1s258ms 21 2 2s625ms 1s312ms 22 3 4s239ms 1s413ms Oct 08 05 6 7s888ms 1s314ms 08 1 1s296ms 1s296ms 09 2 2s481ms 1s240ms 10 4 4s891ms 1s222ms 11 1 1s417ms 1s417ms 12 1 1s609ms 1s609ms 13 3 3s837ms 1s279ms 14 3 3s908ms 1s302ms 15 2 2s564ms 1s282ms 16 3 3s871ms 1s290ms 20 5 6s301ms 1s260ms 21 3 3s758ms 1s252ms 23 1 1s303ms 1s303ms Oct 09 01 2 2s468ms 1s234ms 02 1 1s607ms 1s607ms 03 2 2s474ms 1s237ms 05 4 5s146ms 1s286ms 08 2 2s354ms 1s177ms 10 1 1s366ms 1s366ms 11 2 2s541ms 1s270ms 12 5 6s161ms 1s232ms 13 1 1s282ms 1s282ms 15 2 2s732ms 1s366ms 17 1 1s298ms 1s298ms 20 1 1s170ms 1s170ms 21 2 2s643ms 1s321ms 22 1 1s266ms 1s266ms Oct 10 00 1 1s258ms 1s258ms 02 1 1s218ms 1s218ms 04 7 9s84ms 1s297ms 05 2 2s743ms 1s371ms 07 1 1s213ms 1s213ms 09 1 1s187ms 1s187ms 12 1 1s154ms 1s154ms 14 1 1s221ms 1s221ms 20 1 1s250ms 1s250ms 21 1 1s255ms 1s255ms Oct 11 03 1 1s254ms 1s254ms 05 2 2s713ms 1s356ms 08 1 1s280ms 1s280ms 09 1 1s235ms 1s235ms 10 1 1s259ms 1s259ms 12 2 2s619ms 1s309ms 13 4 5s50ms 1s262ms 15 3 3s812ms 1s270ms 16 2 2s481ms 1s240ms 18 1 1s234ms 1s234ms 19 1 1s246ms 1s246ms 20 1 1s218ms 1s218ms 21 5 6s262ms 1s252ms 23 1 1s206ms 1s206ms Oct 12 01 1 1s318ms 1s318ms 02 1 1s263ms 1s263ms 03 3 3s787ms 1s262ms 05 5 6s676ms 1s335ms 07 2 2s557ms 1s278ms 08 4 4s911ms 1s227ms 09 4 5s25ms 1s256ms 11 1 1s291ms 1s291ms 12 2 2s465ms 1s232ms 13 1 1s272ms 1s272ms 14 2 2s543ms 1s271ms 16 2 2s600ms 1s300ms 17 2 2s452ms 1s226ms 18 1 1s243ms 1s243ms 20 1 1s277ms 1s277ms 21 1 1s274ms 1s274ms 22 1 1s331ms 1s331ms 23 1 1s296ms 1s296ms [ User: pubeu - Total duration: 1m46s - Times executed: 83 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2075804') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2075804') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-10-07 22:34:05 Duration: 1s691ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2080585') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2080585') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-10-08 12:32:39 Duration: 1s609ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2081817') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2081817') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-10-09 02:40:16 Duration: 1s607ms Database: ctdprd51 User: pubeu Bind query: yes
11 168 12m1s 1s2ms 6s161ms 4s292ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Oct 06 00 1 1s23ms 1s23ms 01 7 28s941ms 4s134ms 02 1 5s309ms 5s309ms 03 1 5s104ms 5s104ms 05 1 5s289ms 5s289ms 06 1 5s423ms 5s423ms 07 2 2s64ms 1s32ms 11 3 15s969ms 5s323ms 13 1 1s2ms 1s2ms 14 2 10s996ms 5s498ms 15 1 5s252ms 5s252ms 18 1 5s182ms 5s182ms 21 1 1s21ms 1s21ms Oct 07 02 1 5s239ms 5s239ms 03 1 5s338ms 5s338ms 05 2 6s326ms 3s163ms 06 1 1s19ms 1s19ms 10 1 5s124ms 5s124ms 16 1 5s473ms 5s473ms 21 2 10s712ms 5s356ms 23 1 5s220ms 5s220ms Oct 08 00 1 5s60ms 5s60ms 01 7 36s746ms 5s249ms 02 1 1s18ms 1s18ms 03 2 10s602ms 5s301ms 04 1 5s34ms 5s34ms 10 1 5s158ms 5s158ms 12 1 5s403ms 5s403ms 13 1 5s344ms 5s344ms 18 1 1s10ms 1s10ms 22 6 28s293ms 4s715ms Oct 09 03 2 6s166ms 3s83ms 04 1 5s502ms 5s502ms 05 4 12s946ms 3s236ms 06 17 1m28s 5s209ms 10 1 5s443ms 5s443ms 11 1 6s85ms 6s85ms 12 1 1s18ms 1s18ms 13 1 1s33ms 1s33ms 14 1 1s35ms 1s35ms 16 4 21s967ms 5s491ms 19 1 1s8ms 1s8ms 20 2 10s648ms 5s324ms 21 1 5s485ms 5s485ms 22 2 6s192ms 3s96ms 23 3 11s639ms 3s879ms Oct 10 00 3 11s271ms 3s757ms 03 2 6s363ms 3s181ms 06 1 1s8ms 1s8ms 07 9 38s941ms 4s326ms 08 10 45s911ms 4s591ms 10 1 5s754ms 5s754ms 11 2 2s17ms 1s8ms 13 2 10s647ms 5s323ms 14 1 5s119ms 5s119ms 15 1 5s328ms 5s328ms Oct 11 03 1 1s7ms 1s7ms 04 1 6s26ms 6s26ms 06 1 5s163ms 5s163ms 07 1 5s131ms 5s131ms 08 2 10s733ms 5s366ms 10 1 5s231ms 5s231ms 11 1 5s185ms 5s185ms 15 1 5s256ms 5s256ms 18 1 5s262ms 5s262ms Oct 12 01 1 5s226ms 5s226ms 03 4 12s661ms 3s165ms 05 2 10s534ms 5s267ms 06 2 6s484ms 3s242ms 07 2 6s298ms 3s149ms 08 4 12s813ms 3s203ms 09 1 5s168ms 5s168ms 12 3 15s563ms 5s187ms 13 1 5s205ms 5s205ms 14 3 7s238ms 2s412ms 15 1 5s81ms 5s81ms 17 1 5s217ms 5s217ms 21 2 10s497ms 5s248ms 23 2 6s301ms 3s150ms [ User: pubeu - Total duration: 4m23s - Times executed: 60 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1404739' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-10-10 08:53:57 Duration: 6s161ms Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1326823' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-10-09 11:21:26 Duration: 6s85ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1430593' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-10-11 04:29:03 Duration: 6s26ms Database: ctdprd51 User: pubeu Bind query: yes
12 144 4m44s 1s32ms 5s297ms 1s972ms select e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, ( select string_agg(distinct stressorterm.nm || ? || ( select cd from object_type where id = stressorterm.object_type_id) || ? || stressorterm.nm_html || ? || stressorterm.acc_txt || ? || stressorterm.acc_db_cd, ?)) as stressoragents, ( select string_agg(distinct coalesce(receptorterm.nm, ?) || ? || coalesce(( select cd from object_type where id = receptorterm.object_type_id), ?) || ? || coalesce(receptorterm.nm_html, ?) || ? || coalesce(receptorterm.acc_txt, ?) || ? || coalesce(receptorterm.acc_db_cd, ?) || ? || receptor.description, ?)) as receptors, ( select string_agg(distinct country.nm, ?)) as studycountries, ( select string_agg(distinct location.locality_txt, ?)) as localities, ( select string_agg(distinct event.medium_nm || ? || coalesce(event.medium_term_acc_txt, ?), ?)) as assaymediums, ( select string_agg(distinct exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd, ?)) as assayedmarkers, ( select string_agg(distinct diseaseterm.nm || ? || ( select cd from object_type where id = diseaseterm.object_type_id) || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd, ?)) as diseases, ( select string_agg(distinct phenotypeterm.nm || ? || ( select cd from object_type where id = phenotypeterm.object_type_id) || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd, ?)) as phenotypes, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, re.author_summary summary, count(*) over () fullrowcount from exposure e inner join reference r on e.reference_id = r.id inner join exp_stressor stressor on e.exp_stressor_id = stressor.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join term receptorterm on receptor.term_id = receptorterm.id left outer join exp_event event on e.exp_event_id = event.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join exp_event_location location on e.exp_event_id = location.exp_event_id left outer join country on location.country_id = country.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id inner join reference_exp re on e.reference_id = re.reference_id left outer join exp_study_factor expstudyfactor on re.id = expstudyfactor.reference_exp_id where e.reference_id = any (array ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like ?) and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressoragents limit ?;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Oct 06 03 1 1s575ms 1s575ms 04 1 1s750ms 1s750ms 05 2 2s830ms 1s415ms 08 2 3s253ms 1s626ms 22 1 1s607ms 1s607ms Oct 07 04 1 1s809ms 1s809ms 05 1 1s68ms 1s68ms 13 1 1s329ms 1s329ms 20 5 7s650ms 1s530ms 21 1 1s75ms 1s75ms 22 1 5s259ms 5s259ms 23 2 2s434ms 1s217ms Oct 08 08 1 1s314ms 1s314ms 09 3 4s761ms 1s587ms 10 16 55s922ms 3s495ms 11 1 1s71ms 1s71ms 13 1 5s172ms 5s172ms 18 1 1s597ms 1s597ms 21 5 10s486ms 2s97ms 22 2 2s925ms 1s462ms 23 1 1s41ms 1s41ms Oct 09 00 5 6s190ms 1s238ms 01 1 1s121ms 1s121ms 02 1 1s623ms 1s623ms 03 4 11s318ms 2s829ms 04 1 5s203ms 5s203ms 05 2 2s908ms 1s454ms 07 1 1s143ms 1s143ms 11 1 1s47ms 1s47ms 13 1 1s633ms 1s633ms 19 2 6s721ms 3s360ms 20 2 2s867ms 1s433ms 21 3 5s82ms 1s694ms Oct 10 01 4 7s450ms 1s862ms 02 2 3s163ms 1s581ms 04 1 5s13ms 5s13ms 08 4 5s409ms 1s352ms 09 1 1s88ms 1s88ms 10 1 1s583ms 1s583ms 12 1 1s616ms 1s616ms 14 1 5s153ms 5s153ms 15 3 3s787ms 1s262ms 16 1 1s624ms 1s624ms 17 1 1s798ms 1s798ms 19 2 2s699ms 1s349ms Oct 11 01 2 2s665ms 1s332ms 02 2 2s812ms 1s406ms 03 1 1s309ms 1s309ms 04 2 3s566ms 1s783ms 05 1 1s621ms 1s621ms 08 1 1s586ms 1s586ms 11 2 4s169ms 2s84ms 12 5 11s796ms 2s359ms 13 4 4s992ms 1s248ms 15 2 2s401ms 1s200ms 17 2 3s207ms 1s603ms 22 3 4s679ms 1s559ms Oct 12 00 2 3s151ms 1s575ms 06 1 1s569ms 1s569ms 08 1 1s555ms 1s555ms 11 1 2s743ms 2s743ms 13 1 1s874ms 1s874ms 14 1 1s259ms 1s259ms 17 8 14s764ms 1s845ms 18 1 1s297ms 1s297ms 19 1 1s484ms 1s484ms 21 4 6s323ms 1s580ms [ User: pubeu - Total duration: 2m44s - Times executed: 79 ]
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1395038') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1395038') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2024-10-08 10:11:41 Duration: 5s297ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1395038') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1395038') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2024-10-07 22:32:33 Duration: 5s259ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1395038') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1395038') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2024-10-08 10:09:00 Duration: 5s229ms Database: ctdprd51 User: pubeu Bind query: yes
13 130 2m59s 1s299ms 1s607ms 1s381ms select t.nm, t.nm_html nmhtml, t.secondary_nm secondarynm, t.acc_txt acc, ? || t.nm accquerystr, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term t where t.object_type_id = ? and regexp_replace(upper(substring(t.nm, ?, ?)), ?, ?) = ? order by t.nm_sort limit ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Oct 06 01 1 1s398ms 1s398ms 02 2 2s798ms 1s399ms 04 1 1s408ms 1s408ms 05 2 2s735ms 1s367ms 06 1 1s379ms 1s379ms 07 1 1s381ms 1s381ms 09 1 1s371ms 1s371ms 11 5 6s756ms 1s351ms 17 1 1s420ms 1s420ms 18 1 1s418ms 1s418ms 21 1 1s349ms 1s349ms Oct 07 03 10 13s396ms 1s339ms 04 4 5s409ms 1s352ms 05 3 4s84ms 1s361ms 09 1 1s320ms 1s320ms 11 1 1s363ms 1s363ms 16 1 1s386ms 1s386ms 18 1 1s357ms 1s357ms 19 1 1s348ms 1s348ms 21 1 1s396ms 1s396ms 22 1 1s415ms 1s415ms Oct 08 01 1 1s348ms 1s348ms 02 2 2s743ms 1s371ms 05 2 2s766ms 1s383ms 07 3 4s211ms 1s403ms 11 1 1s381ms 1s381ms 12 2 2s807ms 1s403ms 14 1 1s391ms 1s391ms 21 2 2s784ms 1s392ms 22 1 1s381ms 1s381ms 23 2 2s709ms 1s354ms Oct 09 02 2 2s793ms 1s396ms 04 2 2s750ms 1s375ms 05 2 2s775ms 1s387ms 07 2 2s641ms 1s320ms 08 3 4s265ms 1s421ms 15 1 1s398ms 1s398ms 17 1 1s396ms 1s396ms 23 1 1s397ms 1s397ms Oct 10 01 2 2s788ms 1s394ms 02 4 5s497ms 1s374ms 03 4 5s536ms 1s384ms 04 3 4s188ms 1s396ms 05 3 4s144ms 1s381ms 06 5 6s868ms 1s373ms 07 1 1s333ms 1s333ms 08 1 1s408ms 1s408ms 09 1 1s406ms 1s406ms 11 1 1s397ms 1s397ms 13 1 1s400ms 1s400ms 22 1 1s461ms 1s461ms 23 1 1s353ms 1s353ms Oct 11 05 2 2s761ms 1s380ms 06 1 1s355ms 1s355ms 13 1 1s449ms 1s449ms 14 3 4s177ms 1s392ms 16 2 2s757ms 1s378ms 22 1 1s303ms 1s303ms Oct 12 00 1 1s407ms 1s407ms 03 7 9s975ms 1s425ms 05 2 2s872ms 1s436ms 06 1 1s368ms 1s368ms 07 2 2s795ms 1s397ms 08 2 2s785ms 1s392ms 12 1 1s333ms 1s333ms 16 1 1s443ms 1s443ms 21 1 1s391ms 1s391ms 23 2 2s843ms 1s421ms [ User: pubeu - Total duration: 1m19s - Times executed: 58 ]
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-10-12 03:13:25 Duration: 1s607ms Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-10-12 05:37:08 Duration: 1s474ms Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-10-09 08:31:13 Duration: 1s462ms Database: ctdprd51 User: pubeu Bind query: yes
14 125 2m47s 1s2ms 3s477ms 1s339ms select ? "Input", chemicalname AS "ChemicalName", chemicalid AS "ChemicalID", casrn AS "CasRN", phenotypename AS "PhenotypeName", phenotypeid AS "PhenotypeID", interaction AS "Interaction", interactionactions AS "InteractionActions", organismnameandid AS "OrganismName^ID", anatomynameandidandseqnbr AS "AnatomyName^ID^SeqNbr", inferencenetworkterms AS "InferenceNetworkTerms", pubmedids AS "PubMedIDs" from ( select distinct associatedterm.nm as chemicalname, associatedterm.acc_txt as chemicalid, coalesce(associatedterm.secondary_nm, ?) as casrn, phenotypeterm.nm as phenotypename, phenotypeterm.acc_txt as phenotypeid, i.ixn_prose_txt as interaction, i.actions_txt as interactionactions, ( select string_agg(distinct taxonterm.nm || ? || taxonterm.acc_txt, ?)) as organismnameandid, ( select string_agg(distinct anatomyterm.nm || ? || anatomyterm.acc_txt || ? || ia.level_seq, ?)) as anatomynameandidandseqnbr, ( select string_agg(distinct r.acc_txt, ?)) as pubmedids, i.id, ( select string_agg(distinct t.nm, ?) from phenotype_term_reference ptr2, term t where ptr2.via_term_id = t.id and ptr.phenotype_id = ptr2.phenotype_id and ptr.term_id = ptr2.term_id and ptr2.source_cd = ?) as inferencenetworkterms from phenotype_term_reference ptr inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where associatedterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and ptr.source_cd = ? and ptr.term_object_type_id = ? group by chemicalname, chemicalid, casrn, phenotypename, phenotypeid, i.id, interaction, inferencenetworkterms) as baseline order by chemicalname, phenotypename;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Oct 07 15 35 54s840ms 1s566ms Oct 09 00 52 54s312ms 1s44ms 12 38 58s242ms 1s532ms [ User: pubeu - Total duration: 16s699ms - Times executed: 11 ]
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select 'c006780' "Input", ChemicalName as "ChemicalName", ChemicalID as "ChemicalID", CasRN as "CasRN", PhenotypeName as "PhenotypeName", PhenotypeID as "PhenotypeID", Interaction as "Interaction", InteractionActions as "InteractionActions", OrganismNameAndID as "OrganismName^ID", AnatomyNameAndIDAndSeqNbr as "AnatomyName^ID^SeqNbr", InferenceNetworkTerms as "InferenceNetworkTerms", PubMedIDs as "PubMedIDs" from ( SELECT distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm AS ChemicalName, associatedTerm.acc_txt as ChemicalID, COALESCE(associatedTerm.secondary_nm, '') AS CasRN, phenotypeTerm.nm AS PhenotypeName, phenotypeTerm.acc_txt AS PhenotypeID, i.ixn_prose_txt AS Interaction, i.actions_txt AS InteractionActions, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || taxonTerm.acc_txt, '|')) AS OrganismNameAndID, ( SELECT STRING_AGG(distinct anatomyTerm.nm || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq, '|')) AS AnatomyNameAndIDAndSeqNbr, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) AS PubMedIDs, i.id, ( SELECT STRING_AGG(distinct t.nm, '|') from phenotype_term_reference ptr2, term t where ptr2.via_term_id = t.id and ptr.phenotype_id = ptr2.phenotype_id and ptr.term_id = ptr2.term_id and ptr2.source_cd = 'I') AS InferenceNetworkTerms from phenotype_term_reference ptr inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id WHERE associatedTerm.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1262309) and ptr.source_cd = 'C' and ptr.term_object_type_id = 2 group by ChemicalName, ChemicalID, CasRN, PhenotypeName, PhenotypeID, i.id, Interaction, InferenceNetworkTerms) as baseline ORDER BY ChemicalName, PhenotypeName;
Date: 2024-10-07 15:45:02 Duration: 3s477ms Bind query: yes
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select 'c006780' "Input", ChemicalName as "ChemicalName", ChemicalID as "ChemicalID", CasRN as "CasRN", PhenotypeName as "PhenotypeName", PhenotypeID as "PhenotypeID", Interaction as "Interaction", InteractionActions as "InteractionActions", OrganismNameAndID as "OrganismName^ID", AnatomyNameAndIDAndSeqNbr as "AnatomyName^ID^SeqNbr", InferenceNetworkTerms as "InferenceNetworkTerms", PubMedIDs as "PubMedIDs" from ( SELECT distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm AS ChemicalName, associatedTerm.acc_txt as ChemicalID, COALESCE(associatedTerm.secondary_nm, '') AS CasRN, phenotypeTerm.nm AS PhenotypeName, phenotypeTerm.acc_txt AS PhenotypeID, i.ixn_prose_txt AS Interaction, i.actions_txt AS InteractionActions, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || taxonTerm.acc_txt, '|')) AS OrganismNameAndID, ( SELECT STRING_AGG(distinct anatomyTerm.nm || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq, '|')) AS AnatomyNameAndIDAndSeqNbr, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) AS PubMedIDs, i.id, ( SELECT STRING_AGG(distinct t.nm, '|') from phenotype_term_reference ptr2, term t where ptr2.via_term_id = t.id and ptr.phenotype_id = ptr2.phenotype_id and ptr.term_id = ptr2.term_id and ptr2.source_cd = 'I') AS InferenceNetworkTerms from phenotype_term_reference ptr inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id WHERE associatedTerm.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1262309) and ptr.source_cd = 'C' and ptr.term_object_type_id = 2 group by ChemicalName, ChemicalID, CasRN, PhenotypeName, PhenotypeID, i.id, Interaction, InferenceNetworkTerms) as baseline ORDER BY ChemicalName, PhenotypeName;
Date: 2024-10-09 12:32:44 Duration: 3s435ms Bind query: yes
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select 'c017947' "Input", ChemicalName as "ChemicalName", ChemicalID as "ChemicalID", CasRN as "CasRN", PhenotypeName as "PhenotypeName", PhenotypeID as "PhenotypeID", Interaction as "Interaction", InteractionActions as "InteractionActions", OrganismNameAndID as "OrganismName^ID", AnatomyNameAndIDAndSeqNbr as "AnatomyName^ID^SeqNbr", InferenceNetworkTerms as "InferenceNetworkTerms", PubMedIDs as "PubMedIDs" from ( SELECT distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm AS ChemicalName, associatedTerm.acc_txt as ChemicalID, COALESCE(associatedTerm.secondary_nm, '') AS CasRN, phenotypeTerm.nm AS PhenotypeName, phenotypeTerm.acc_txt AS PhenotypeID, i.ixn_prose_txt AS Interaction, i.actions_txt AS InteractionActions, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || taxonTerm.acc_txt, '|')) AS OrganismNameAndID, ( SELECT STRING_AGG(distinct anatomyTerm.nm || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq, '|')) AS AnatomyNameAndIDAndSeqNbr, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) AS PubMedIDs, i.id, ( SELECT STRING_AGG(distinct t.nm, '|') from phenotype_term_reference ptr2, term t where ptr2.via_term_id = t.id and ptr.phenotype_id = ptr2.phenotype_id and ptr.term_id = ptr2.term_id and ptr2.source_cd = 'I') AS InferenceNetworkTerms from phenotype_term_reference ptr inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id WHERE associatedTerm.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1366246) and ptr.source_cd = 'C' and ptr.term_object_type_id = 2 group by ChemicalName, ChemicalID, CasRN, PhenotypeName, PhenotypeID, i.id, Interaction, InferenceNetworkTerms) as baseline ORDER BY ChemicalName, PhenotypeName;
Date: 2024-10-07 15:45:33 Duration: 2s728ms Bind query: yes
15 122 7m52s 1s 12s398ms 3s869ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Oct 06 02 1 1s302ms 1s302ms 03 1 1s166ms 1s166ms 05 2 4s463ms 2s231ms 06 3 3s448ms 1s149ms 08 3 10s563ms 3s521ms 09 1 1s220ms 1s220ms 10 3 5s68ms 1s689ms 11 1 1s321ms 1s321ms 12 2 2s431ms 1s215ms 14 2 9s528ms 4s764ms 16 1 2s191ms 2s191ms 17 2 3s474ms 1s737ms 21 3 3s477ms 1s159ms 22 1 1s46ms 1s46ms Oct 07 00 1 1s305ms 1s305ms 01 2 11s507ms 5s753ms 03 1 2s601ms 2s601ms 07 1 5s409ms 5s409ms 12 1 2s964ms 2s964ms 13 1 1s21ms 1s21ms 19 1 1s186ms 1s186ms 22 1 1s261ms 1s261ms 23 2 3s818ms 1s909ms Oct 08 02 2 11s475ms 5s737ms 04 1 4s729ms 4s729ms 08 4 6s806ms 1s701ms 10 1 1s368ms 1s368ms 12 1 2s729ms 2s729ms 13 2 7s643ms 3s821ms 17 3 27s625ms 9s208ms 23 1 1s308ms 1s308ms Oct 09 04 4 44s12ms 11s3ms 05 1 1s286ms 1s286ms 08 1 4s762ms 4s762ms 10 1 1s183ms 1s183ms 12 2 3s805ms 1s902ms 13 2 2s509ms 1s254ms 14 2 20s711ms 10s355ms 15 1 1s316ms 1s316ms 16 1 1s35ms 1s35ms 17 2 5s631ms 2s815ms 18 2 2s505ms 1s252ms 19 1 5s470ms 5s470ms 21 1 1s638ms 1s638ms Oct 10 00 2 11s462ms 5s731ms 04 1 2s635ms 2s635ms 05 2 24s656ms 12s328ms 07 1 1s313ms 1s313ms 09 2 2s135ms 1s67ms 10 1 1s329ms 1s329ms 11 1 2s974ms 2s974ms 12 3 18s272ms 6s90ms 14 1 5s93ms 5s93ms 22 1 1s244ms 1s244ms Oct 11 00 1 1s298ms 1s298ms 03 1 1s 1s 04 1 4s995ms 4s995ms 07 2 6s365ms 3s182ms 09 3 31s316ms 10s438ms 12 1 10s462ms 10s462ms 13 1 5s406ms 5s406ms 14 1 1s559ms 1s559ms 16 2 20s516ms 10s258ms 18 1 1s287ms 1s287ms 20 3 8s432ms 2s810ms 21 1 1s26ms 1s26ms 22 2 2s989ms 1s494ms Oct 12 01 1 6s311ms 6s311ms 02 1 2s971ms 2s971ms 04 1 4s799ms 4s799ms 05 1 10s238ms 10s238ms 07 2 3s472ms 1s736ms 10 1 1s32ms 1s32ms 11 2 12s934ms 6s467ms 12 1 1s235ms 1s235ms 13 1 5s546ms 5s546ms 14 1 6s310ms 6s310ms 16 1 5s573ms 5s573ms 17 1 2s579ms 2s579ms [ User: pubeu - Total duration: 3m33s - Times executed: 65 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2081060') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-10-11 09:29:03 Duration: 12s398ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2081060') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-10-11 09:29:00 Duration: 12s395ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2081060') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-10-10 05:27:04 Duration: 12s339ms Bind query: yes
16 120 5m31s 1s11ms 33s383ms 2s763ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Oct 06 04 1 1s519ms 1s519ms 05 1 12s668ms 12s668ms 10 1 1s116ms 1s116ms 11 1 1s960ms 1s960ms 16 1 20s959ms 20s959ms 19 1 1s541ms 1s541ms 21 1 7s385ms 7s385ms Oct 07 02 1 1s154ms 1s154ms 03 1 2s82ms 2s82ms 04 1 7s631ms 7s631ms 07 2 3s37ms 1s518ms 08 4 4s278ms 1s69ms 15 3 4s568ms 1s522ms 16 1 1s584ms 1s584ms 21 2 8s484ms 4s242ms 22 3 3s468ms 1s156ms Oct 08 02 2 2s962ms 1s481ms 03 1 1s28ms 1s28ms 06 5 10s723ms 2s144ms 07 12 21s379ms 1s781ms 09 1 2s109ms 2s109ms 10 12 27s502ms 2s291ms 12 1 4s535ms 4s535ms 17 1 1s924ms 1s924ms Oct 09 03 1 2s89ms 2s89ms 07 1 9s463ms 9s463ms 12 1 4s499ms 4s499ms 15 1 1s583ms 1s583ms 18 1 5s573ms 5s573ms 21 1 1s771ms 1s771ms Oct 10 00 2 2s255ms 1s127ms 07 1 7s352ms 7s352ms 10 10 21s849ms 2s184ms 11 3 6s416ms 2s138ms 12 1 1s888ms 1s888ms 23 1 3s705ms 3s705ms Oct 11 00 1 12s706ms 12s706ms 01 4 6s147ms 1s536ms 04 13 14s61ms 1s81ms 07 2 35s544ms 17s772ms 13 2 3s55ms 1s527ms 14 1 1s576ms 1s576ms 21 2 3s638ms 1s819ms 22 1 2s80ms 2s80ms Oct 12 04 2 5s607ms 2s803ms 05 1 2s953ms 2s953ms 10 3 10s999ms 3s666ms 12 1 4s414ms 4s414ms 14 1 1s380ms 1s380ms 16 1 1s421ms 1s421ms 17 1 1s957ms 1s957ms [ User: pubeu - Total duration: 2m41s - Times executed: 65 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2087863') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-10-11 07:27:55 Duration: 33s383ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2087266') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-10-06 16:35:27 Duration: 20s959ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2079065') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-10-11 00:29:02 Duration: 12s706ms Bind query: yes
17 112 3m48s 1s26ms 6s222ms 2s41ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where associatedterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Oct 07 18 1 1s344ms 1s344ms 20 1 1s349ms 1s349ms 21 3 5s466ms 1s822ms 22 1 6s119ms 6s119ms Oct 08 07 3 9s690ms 3s230ms 09 2 3s800ms 1s900ms 10 5 23s620ms 4s724ms 12 1 1s649ms 1s649ms 13 2 3s118ms 1s559ms 16 2 3s20ms 1s510ms 21 6 12s776ms 2s129ms Oct 09 00 3 4s941ms 1s647ms 01 3 4s479ms 1s493ms 02 4 6s12ms 1s503ms 03 4 13s474ms 3s368ms 05 3 11s590ms 3s863ms 11 1 1s313ms 1s313ms 19 1 1s339ms 1s339ms Oct 10 00 1 1s333ms 1s333ms 01 7 10s374ms 1s482ms 02 6 9s545ms 1s590ms 03 1 1s333ms 1s333ms 04 3 4s638ms 1s546ms 06 1 3s318ms 3s318ms 08 9 12s84ms 1s342ms 11 1 1s334ms 1s334ms 14 1 6s131ms 6s131ms 16 1 1s353ms 1s353ms 21 1 1s996ms 1s996ms 22 1 1s640ms 1s640ms Oct 11 06 1 1s351ms 1s351ms 07 1 1s644ms 1s644ms 10 1 1s665ms 1s665ms 11 4 5s595ms 1s398ms 12 9 19s701ms 2s189ms 13 1 1s652ms 1s652ms 17 3 4s919ms 1s639ms 18 1 1s334ms 1s334ms Oct 12 14 1 3s279ms 3s279ms 15 1 3s284ms 3s284ms 17 5 6s516ms 1s303ms 18 1 1s335ms 1s335ms 20 1 1s360ms 1s360ms 21 3 4s824ms 1s608ms [ User: pubeu - Total duration: 1m39s - Times executed: 49 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1395038'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-11 12:39:18 Duration: 6s222ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1395038'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-08 07:36:00 Duration: 6s166ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1395038'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-08 10:12:49 Duration: 6s161ms Database: ctdprd51 User: pubeu Bind query: yes
18 103 14m22s 1s556ms 24s206ms 8s369ms select distinct phenotypeterm.nm as gonm, phenotypeterm.nm_html as gonmhtml, phenotypeterm.acc_txt as goacc, diseaseterm.nm as diseasenm, diseaseterm.nm_html as diseasenmhtml, diseaseterm.acc_txt as diseaseacc, diseaseterm.acc_db_cd as diseaseaccdbcd, chemterm.nm as chemnm, chemterm.nm_html as chemnmhtml, chemterm.acc_txt as chemacc, geneterm.nm as genesymbol, geneterm.nm_html as genesymbolhtml, geneterm.acc_txt as geneacc, count(*) over () fullrowcount from phenotype_term_reference viachemptr, phenotype_term_reference viageneptr, term phenotypeterm, term diseaseterm, term geneterm, term chemterm where viachemptr.via_term_id in ( select baseterm.id from term baseterm where baseterm.object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?)) and viageneptr.via_term_id in ( select baseterm.id from term baseterm where baseterm.object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?)) and viachemptr.phenotype_id = phenotypeterm.id and viachemptr.term_object_type_id = ? and viachemptr.term_id = diseaseterm.id and viachemptr.via_term_object_type_id = ? and viachemptr.via_term_id = chemterm.id and viachemptr.term_id = viageneptr.term_id and viachemptr.phenotype_id = viageneptr.phenotype_id and viageneptr.via_term_object_type_id = ? and viageneptr.via_term_id = geneterm.id and exists ( select ? from gene_chem_reference where gene_id = geneterm.id and chem_id = chemterm.id) group by phenotypeterm.nm, phenotypeterm.nm_html, phenotypeterm.acc_txt, diseaseterm.nm, diseaseterm.nm_html, diseaseterm.acc_txt, diseaseterm.acc_db_cd, chemterm.nm, chemterm.nm_html, chemterm.acc_txt, geneterm.nm, geneterm.nm_html, geneterm.acc_txt order by chemterm.nm limit ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Oct 09 08 103 14m22s 8s369ms [ User: pubeu - Total duration: 5m8s - Times executed: 24 ]
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select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'CISPLATIN' AND tl.object_type_id = 2)) and viaGenePTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'TNF' AND tl.object_type_id = 4)) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-10-09 08:52:30 Duration: 24s206ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'CISPLATIN' AND tl.object_type_id = 2)) and viaGenePTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'IL1B' AND tl.object_type_id = 4)) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-10-09 08:54:03 Duration: 23s466ms Bind query: yes
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select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'CISPLATIN' AND tl.object_type_id = 2)) and viaGenePTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'PTGS2' AND tl.object_type_id = 4)) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-10-09 08:58:38 Duration: 23s40ms Database: ctdprd51 User: pubeu Bind query: yes
19 100 53m39s 10s642ms 1m57s 32s196ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Oct 07 15 7 5m37s 48s251ms 16 43 21m8s 29s504ms Oct 09 12 19 12m29s 39s438ms 13 31 14m23s 27s867ms [ User: pubeu - Total duration: 30m29s - Times executed: 59 ]
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SELECT /* BatchChemGODAO */ 'd052638' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1357427)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-10-07 16:33:17 Duration: 1m57s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'd052638' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1357427)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-10-09 13:20:18 Duration: 1m54s Bind query: yes
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SELECT /* BatchChemGODAO */ 'c006780' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1262309)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-10-09 12:42:09 Duration: 1m8s Database: ctdprd51 User: pubeu Bind query: yes
20 100 40m8s 11s168ms 58s411ms 24s88ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Oct 07 18 50 20m2s 24s42ms Oct 09 15 50 20m6s 24s133ms [ User: pubeu - Total duration: 24m19s - Times executed: 60 ]
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SELECT /* BatchChemGODAO */ 'c006780' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1262309)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-10-07 18:20:32 Duration: 58s411ms Bind query: yes
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SELECT /* BatchChemGODAO */ 'c006780' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1262309)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-10-09 15:06:02 Duration: 57s33ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'd013749' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1413942)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-10-09 15:04:13 Duration: 49s610ms Bind query: yes
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 23m44s 23m44s 23m44s 1 23m44s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Oct 12 19 1 23m44s 23m44s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-10-12 19:00:41 Duration: 23m44s
2 23m38s 23m38s 23m38s 1 23m38s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Oct 12 19 1 23m38s 23m38s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-10-12 19:42:21 Duration: 23m38s
3 16m57s 17m10s 17m 7 1h59m5s select maint_query_logs_archive ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Oct 06 00 1 16m57s 16m57s Oct 07 00 1 16m59s 16m59s Oct 08 00 1 17m10s 17m10s Oct 09 00 1 16m58s 16m58s Oct 10 00 1 16m59s 16m59s Oct 11 00 1 16m58s 16m58s Oct 12 00 1 17m1s 17m1s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-10-08 00:17:11 Duration: 17m10s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-10-12 00:17:02 Duration: 17m1s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-10-07 00:17:00 Duration: 16m59s
4 10m46s 10m46s 10m46s 1 10m46s select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id where gcr.gene_id = any (array (( select gi.id gene_id from term gi where gi.object_type_id = ? and upper(gi.nm) like ?) intersect ( select ai.gene_id from dag_path pi inner join gene_go_annot ai on pi.descendant_object_id = ai.go_term_id inner join db_link dbli on dbli.object_id = pi.ancestor_object_id where dbli.acc_txt = ? and dbli.type_cd = ? and dbli.object_type_id = ?) intersect ( select tp.term_id from term_pathway tp where tp.object_type_id = ? and upper(tp.pathway_acc_txt) = ? and tp.pathway_acc_db_cd = ?))) and gcr.chem_id = any (array ( select dp.descendant_object_id from dag_path dp inner join term t on t.id = dp.ancestor_object_id where upper(t.nm) like ? and t.object_type_id = ?)) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?)) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by c.nm_sort, g.nm_sort, i.sort_txt limit ?;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Oct 11 10 1 10m46s 10m46s [ User: pubeu - Total duration: 10m46s - Times executed: 1 ]
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CFTR') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'R-HSA-390466' AND tp.pathway_acc_db_cd = 'REACT'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'LUMACAFTOR' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2024-10-11 10:40:55 Duration: 10m46s Database: ctdprd51 User: pubeu Bind query: yes
5 1s518ms 4m15s 2m26s 15 36m30s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Oct 06 11 1 3m59s 3m59s 19 1 3s45ms 3s45ms Oct 07 23 1 3m46s 3m46s Oct 08 04 1 3m22s 3m22s 11 1 4m15s 4m15s Oct 09 03 1 2m38s 2m38s 09 2 3m41s 1m50s Oct 10 09 1 3m39s 3m39s 23 1 3m39s 3m39s Oct 11 08 1 1s560ms 1s560ms 10 2 5s68ms 2s534ms 23 1 3m38s 3m38s Oct 12 09 1 3m39s 3m39s [ User: pubeu - Total duration: 29m26s - Times executed: 12 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1228257') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-10-08 11:58:53 Duration: 4m15s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1249122') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-10-06 11:51:34 Duration: 3m59s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1249213') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-10-07 23:51:39 Duration: 3m46s Database: ctdprd51 User: pubeu Bind query: yes
6 33s793ms 35s157ms 34s341ms 25 14m18s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Oct 06 06 1 34s272ms 34s272ms 10 1 34s353ms 34s353ms 14 1 34s354ms 34s354ms 18 1 34s238ms 34s238ms Oct 07 06 1 34s284ms 34s284ms 10 1 34s170ms 34s170ms 14 1 34s292ms 34s292ms 18 1 34s279ms 34s279ms Oct 08 06 1 34s221ms 34s221ms 10 1 35s157ms 35s157ms 14 1 34s549ms 34s549ms 18 1 34s204ms 34s204ms Oct 09 06 1 34s332ms 34s332ms 10 1 34s336ms 34s336ms 14 1 34s386ms 34s386ms 18 1 34s188ms 34s188ms Oct 10 06 1 34s677ms 34s677ms 10 1 34s466ms 34s466ms 14 1 34s381ms 34s381ms 18 1 34s286ms 34s286ms Oct 11 06 1 34s321ms 34s321ms 10 1 34s250ms 34s250ms 14 1 34s399ms 34s399ms 18 1 34s329ms 34s329ms Oct 12 19 1 33s793ms 33s793ms [ User: postgres - Total duration: 13m44s - Times executed: 24 ]
[ Application: pg_dump - Total duration: 13m44s - Times executed: 24 ]
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-10-08 10:05:36 Duration: 35s157ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-10-10 06:05:36 Duration: 34s677ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-10-08 14:05:36 Duration: 34s549ms Database: ctdprd51 User: postgres Application: pg_dump
7 10s642ms 1m57s 32s196ms 100 53m39s select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Oct 07 15 7 5m37s 48s251ms 16 43 21m8s 29s504ms Oct 09 12 19 12m29s 39s438ms 13 31 14m23s 27s867ms [ User: pubeu - Total duration: 30m29s - Times executed: 59 ]
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SELECT /* BatchChemGODAO */ 'd052638' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1357427)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-10-07 16:33:17 Duration: 1m57s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'd052638' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1357427)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-10-09 13:20:18 Duration: 1m54s Bind query: yes
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SELECT /* BatchChemGODAO */ 'c006780' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1262309)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-10-09 12:42:09 Duration: 1m8s Database: ctdprd51 User: pubeu Bind query: yes
8 2s521ms 2m18s 24s176ms 94 37m52s select ? "Input", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = d.id) "DiseaseCategories", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(distinct r.acc_txt, ?) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id where d.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by d.nm_sort, g.nm, "DirectEvidence", c.nm;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Oct 07 17 44 18m 24s560ms Oct 09 13 14 9m49s 42s142ms 14 36 10m1s 16s719ms [ User: pubeu - Total duration: 16m46s - Times executed: 43 ]
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd064420' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2088398) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2024-10-09 13:59:33 Duration: 2m18s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd064420' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2088398) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2024-10-07 17:13:08 Duration: 2m13s Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd006331' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2076076) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2024-10-09 14:17:49 Duration: 1m56s Bind query: yes
9 11s168ms 58s411ms 24s88ms 100 40m8s select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Oct 07 18 50 20m2s 24s42ms Oct 09 15 50 20m6s 24s133ms [ User: pubeu - Total duration: 24m19s - Times executed: 60 ]
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SELECT /* BatchChemGODAO */ 'c006780' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1262309)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-10-07 18:20:32 Duration: 58s411ms Bind query: yes
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SELECT /* BatchChemGODAO */ 'c006780' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1262309)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-10-09 15:06:02 Duration: 57s33ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'd013749' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1413942)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-10-09 15:04:13 Duration: 49s610ms Bind query: yes
10 2s356ms 2m11s 19s866ms 88 29m8s select ? "Input", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = d.id) "DiseaseCategories", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(distinct r.acc_txt, ?) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id where d.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and gdr.source_cd = ? group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, c.nm, gdr.network_score order by d.nm_sort, g.nm, c.nm;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Oct 07 17 39 13m8s 20s217ms 18 6 2m53s 28s847ms Oct 09 14 43 13m6s 18s295ms [ User: pubeu - Total duration: 16m12s - Times executed: 52 ]
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd064420' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2088398) AND gdr.source_cd = 'I' GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, c.nm;
Date: 2024-10-07 17:46:02 Duration: 2m11s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd056486' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2076812) AND gdr.source_cd = 'I' GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, c.nm;
Date: 2024-10-09 14:23:37 Duration: 1m44s Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd056486' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2076812) AND gdr.source_cd = 'I' GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, c.nm;
Date: 2024-10-07 17:37:36 Duration: 1m43s Bind query: yes
11 1s556ms 24s206ms 8s369ms 103 14m22s select distinct phenotypeterm.nm as gonm, phenotypeterm.nm_html as gonmhtml, phenotypeterm.acc_txt as goacc, diseaseterm.nm as diseasenm, diseaseterm.nm_html as diseasenmhtml, diseaseterm.acc_txt as diseaseacc, diseaseterm.acc_db_cd as diseaseaccdbcd, chemterm.nm as chemnm, chemterm.nm_html as chemnmhtml, chemterm.acc_txt as chemacc, geneterm.nm as genesymbol, geneterm.nm_html as genesymbolhtml, geneterm.acc_txt as geneacc, count(*) over () fullrowcount from phenotype_term_reference viachemptr, phenotype_term_reference viageneptr, term phenotypeterm, term diseaseterm, term geneterm, term chemterm where viachemptr.via_term_id in ( select baseterm.id from term baseterm where baseterm.object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?)) and viageneptr.via_term_id in ( select baseterm.id from term baseterm where baseterm.object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?)) and viachemptr.phenotype_id = phenotypeterm.id and viachemptr.term_object_type_id = ? and viachemptr.term_id = diseaseterm.id and viachemptr.via_term_object_type_id = ? and viachemptr.via_term_id = chemterm.id and viachemptr.term_id = viageneptr.term_id and viachemptr.phenotype_id = viageneptr.phenotype_id and viageneptr.via_term_object_type_id = ? and viageneptr.via_term_id = geneterm.id and exists ( select ? from gene_chem_reference where gene_id = geneterm.id and chem_id = chemterm.id) group by phenotypeterm.nm, phenotypeterm.nm_html, phenotypeterm.acc_txt, diseaseterm.nm, diseaseterm.nm_html, diseaseterm.acc_txt, diseaseterm.acc_db_cd, chemterm.nm, chemterm.nm_html, chemterm.acc_txt, geneterm.nm, geneterm.nm_html, geneterm.acc_txt order by chemterm.nm limit ?;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Oct 09 08 103 14m22s 8s369ms [ User: pubeu - Total duration: 5m8s - Times executed: 24 ]
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select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'CISPLATIN' AND tl.object_type_id = 2)) and viaGenePTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'TNF' AND tl.object_type_id = 4)) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-10-09 08:52:30 Duration: 24s206ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'CISPLATIN' AND tl.object_type_id = 2)) and viaGenePTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'IL1B' AND tl.object_type_id = 4)) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-10-09 08:54:03 Duration: 23s466ms Bind query: yes
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select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'CISPLATIN' AND tl.object_type_id = 2)) and viaGenePTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'PTGS2' AND tl.object_type_id = 4)) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-10-09 08:58:38 Duration: 23s40ms Database: ctdprd51 User: pubeu Bind query: yes
12 1s296ms 11s474ms 8s293ms 75 10m22s select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Oct 06 05 4 35s113ms 8s778ms 07 4 35s261ms 8s815ms 11 1 5s613ms 5s613ms Oct 07 01 4 35s115ms 8s778ms 13 4 35s848ms 8s962ms 16 4 35s513ms 8s878ms 20 2 17s458ms 8s729ms Oct 08 20 4 35s668ms 8s917ms Oct 09 02 1 1s944ms 1s944ms 07 2 17s606ms 8s803ms 13 1 11s474ms 11s474ms Oct 10 06 8 1m10s 8s811ms 12 4 34s532ms 8s633ms Oct 11 07 4 35s36ms 8s759ms 13 4 35s179ms 8s794ms 23 4 35s150ms 8s787ms Oct 12 00 4 34s823ms 8s705ms 01 4 34s611ms 8s652ms 13 4 35s132ms 8s783ms 14 4 5s263ms 1s315ms 18 4 35s198ms 8s799ms [ User: pubeu - Total duration: 4m40s - Times executed: 32 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1241675') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;
Date: 2024-10-09 13:37:38 Duration: 11s474ms Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;
Date: 2024-10-07 13:44:09 Duration: 9s216ms Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;
Date: 2024-10-08 20:06:49 Duration: 9s88ms Bind query: yes
13 6s734ms 7s357ms 6s992ms 253 29m29s select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?)))) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Oct 07 13 41 4m45s 6s967ms 14 69 8m2s 6s998ms 15 9 1m3s 7s46ms Oct 09 10 50 5m49s 6s995ms 11 84 9m47s 6s993ms [ User: pubeu - Total duration: 8m3s - Times executed: 69 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'CISPLATIN' AND tl.object_type_id = 2))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'EPITHELIAL CELLS' AND tl.object_type_id = 10)))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-07 15:03:46 Duration: 7s357ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'BENZO(A)PYRENE' AND tl.object_type_id = 2))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'KIDNEY' AND tl.object_type_id = 10)))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-07 14:00:26 Duration: 7s178ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'ESTRADIOL' AND tl.object_type_id = 2))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'HEP G2 CELLS' AND tl.object_type_id = 10)))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-07 14:48:34 Duration: 7s172ms Bind query: yes
14 6s691ms 7s258ms 6s967ms 278 32m17s select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?))) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Oct 07 13 55 6m23s 6s969ms 14 80 9m17s 6s964ms Oct 09 10 69 8m 6s959ms 11 74 8m36s 6s977ms [ User: pubeu - Total duration: 9m3s - Times executed: 78 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'BISPHENOL A' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-09 10:36:06 Duration: 7s258ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'LIPOPOLYSACCHARIDES' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-09 11:40:19 Duration: 7s157ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'ACETAMINOPHEN' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-07 14:17:14 Duration: 7s132ms Bind query: yes
15 1s394ms 14s523ms 4s736ms 277 21m51s select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?))) and taxonterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?))) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Oct 07 13 46 3m32s 4s610ms 14 83 6m35s 4s762ms 15 8 37s354ms 4s669ms Oct 09 10 56 4m27s 4s771ms 11 84 6m40s 4s762ms [ User: pubeu - Total duration: 6m11s - Times executed: 67 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'BISPHENOL A' AND tl.object_type_id = 2))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'SUS SCROFA' AND tl.object_type_id = 1))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-09 10:38:16 Duration: 14s523ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = '(6-(4-(2-PIPERIDIN-1-YLETHOXY)PHENYL))-3-PYRIDIN-4-YLPYRAZOLO(1,5-A)PYRIMIDINE' AND tl.object_type_id = 2))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'SUS SCROFA' AND tl.object_type_id = 1))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-09 10:54:21 Duration: 14s520ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = '(6-(4-(2-PIPERIDIN-1-YLETHOXY)PHENYL))-3-PYRIDIN-4-YLPYRAZOLO(1,5-A)PYRIMIDINE' AND tl.object_type_id = 2))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'PIMEPHALES PROMELAS' AND tl.object_type_id = 1))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-07 14:05:25 Duration: 14s519ms Bind query: yes
16 1s2ms 6s161ms 4s292ms 168 12m1s select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Oct 06 00 1 1s23ms 1s23ms 01 7 28s941ms 4s134ms 02 1 5s309ms 5s309ms 03 1 5s104ms 5s104ms 05 1 5s289ms 5s289ms 06 1 5s423ms 5s423ms 07 2 2s64ms 1s32ms 11 3 15s969ms 5s323ms 13 1 1s2ms 1s2ms 14 2 10s996ms 5s498ms 15 1 5s252ms 5s252ms 18 1 5s182ms 5s182ms 21 1 1s21ms 1s21ms Oct 07 02 1 5s239ms 5s239ms 03 1 5s338ms 5s338ms 05 2 6s326ms 3s163ms 06 1 1s19ms 1s19ms 10 1 5s124ms 5s124ms 16 1 5s473ms 5s473ms 21 2 10s712ms 5s356ms 23 1 5s220ms 5s220ms Oct 08 00 1 5s60ms 5s60ms 01 7 36s746ms 5s249ms 02 1 1s18ms 1s18ms 03 2 10s602ms 5s301ms 04 1 5s34ms 5s34ms 10 1 5s158ms 5s158ms 12 1 5s403ms 5s403ms 13 1 5s344ms 5s344ms 18 1 1s10ms 1s10ms 22 6 28s293ms 4s715ms Oct 09 03 2 6s166ms 3s83ms 04 1 5s502ms 5s502ms 05 4 12s946ms 3s236ms 06 17 1m28s 5s209ms 10 1 5s443ms 5s443ms 11 1 6s85ms 6s85ms 12 1 1s18ms 1s18ms 13 1 1s33ms 1s33ms 14 1 1s35ms 1s35ms 16 4 21s967ms 5s491ms 19 1 1s8ms 1s8ms 20 2 10s648ms 5s324ms 21 1 5s485ms 5s485ms 22 2 6s192ms 3s96ms 23 3 11s639ms 3s879ms Oct 10 00 3 11s271ms 3s757ms 03 2 6s363ms 3s181ms 06 1 1s8ms 1s8ms 07 9 38s941ms 4s326ms 08 10 45s911ms 4s591ms 10 1 5s754ms 5s754ms 11 2 2s17ms 1s8ms 13 2 10s647ms 5s323ms 14 1 5s119ms 5s119ms 15 1 5s328ms 5s328ms Oct 11 03 1 1s7ms 1s7ms 04 1 6s26ms 6s26ms 06 1 5s163ms 5s163ms 07 1 5s131ms 5s131ms 08 2 10s733ms 5s366ms 10 1 5s231ms 5s231ms 11 1 5s185ms 5s185ms 15 1 5s256ms 5s256ms 18 1 5s262ms 5s262ms Oct 12 01 1 5s226ms 5s226ms 03 4 12s661ms 3s165ms 05 2 10s534ms 5s267ms 06 2 6s484ms 3s242ms 07 2 6s298ms 3s149ms 08 4 12s813ms 3s203ms 09 1 5s168ms 5s168ms 12 3 15s563ms 5s187ms 13 1 5s205ms 5s205ms 14 3 7s238ms 2s412ms 15 1 5s81ms 5s81ms 17 1 5s217ms 5s217ms 21 2 10s497ms 5s248ms 23 2 6s301ms 3s150ms [ User: pubeu - Total duration: 4m23s - Times executed: 60 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1404739' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-10-10 08:53:57 Duration: 6s161ms Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1326823' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-10-09 11:21:26 Duration: 6s85ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1430593' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-10-11 04:29:03 Duration: 6s26ms Database: ctdprd51 User: pubeu Bind query: yes
17 3s786ms 6s282ms 4s 391 26m4s select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Oct 06 00 11 43s782ms 3s980ms 01 5 20s251ms 4s50ms 02 7 27s613ms 3s944ms 04 1 4s133ms 4s133ms 06 1 4s115ms 4s115ms 07 1 3s842ms 3s842ms 08 1 3s899ms 3s899ms 09 1 3s789ms 3s789ms 10 1 3s806ms 3s806ms 11 2 7s934ms 3s967ms 12 1 3s820ms 3s820ms 13 12 47s734ms 3s977ms 14 22 1m28s 4s4ms 15 21 1m23s 3s980ms 16 3 12s109ms 4s36ms 17 5 19s765ms 3s953ms 18 5 19s881ms 3s976ms 19 3 11s536ms 3s845ms 20 7 28s26ms 4s3ms 21 12 49s195ms 4s99ms 22 3 12s107ms 4s35ms 23 1 3s882ms 3s882ms Oct 07 00 2 7s951ms 3s975ms 01 1 3s961ms 3s961ms 02 2 8s462ms 4s231ms 03 1 3s884ms 3s884ms 04 2 8s544ms 4s272ms 05 4 15s786ms 3s946ms 07 1 3s941ms 3s941ms 08 3 11s642ms 3s880ms 09 3 12s233ms 4s77ms 12 2 7s819ms 3s909ms 13 1 3s829ms 3s829ms 17 2 7s998ms 3s999ms 18 1 4s380ms 4s380ms 21 1 4s17ms 4s17ms 23 10 39s611ms 3s961ms Oct 08 00 3 11s917ms 3s972ms 02 3 12s432ms 4s144ms 03 2 7s904ms 3s952ms 04 3 11s958ms 3s986ms 05 1 3s899ms 3s899ms 06 4 16s29ms 4s7ms 08 1 4s78ms 4s78ms 09 1 3s943ms 3s943ms 16 3 12s247ms 4s82ms 17 1 3s866ms 3s866ms 18 3 12s198ms 4s66ms 19 8 31s713ms 3s964ms 20 9 35s872ms 3s985ms 21 1 3s964ms 3s964ms 22 10 39s857ms 3s985ms 23 1 3s911ms 3s911ms Oct 09 00 6 23s819ms 3s969ms 01 15 1m 4s13ms 02 1 3s997ms 3s997ms 04 8 31s704ms 3s963ms 05 7 27s413ms 3s916ms 06 2 7s939ms 3s969ms 07 1 3s985ms 3s985ms 08 4 16s30ms 4s7ms 09 4 15s911ms 3s977ms 10 4 16s329ms 4s82ms 11 2 8s479ms 4s239ms 12 4 16s359ms 4s89ms 13 2 8s391ms 4s195ms 15 1 3s999ms 3s999ms 16 2 7s987ms 3s993ms 17 3 11s844ms 3s948ms 19 1 3s874ms 3s874ms 20 1 4s72ms 4s72ms 22 1 3s872ms 3s872ms 23 3 12s121ms 4s40ms Oct 10 00 2 7s716ms 3s858ms 01 1 4s86ms 4s86ms 02 3 11s875ms 3s958ms 03 3 12s315ms 4s105ms 04 1 4s182ms 4s182ms 05 1 4s163ms 4s163ms 07 1 3s971ms 3s971ms 08 5 19s764ms 3s952ms 10 1 4s55ms 4s55ms 11 8 31s446ms 3s930ms 12 2 8s165ms 4s82ms 13 6 23s698ms 3s949ms 15 2 7s862ms 3s931ms 17 1 3s988ms 3s988ms 18 3 12s701ms 4s233ms 19 4 16s820ms 4s205ms 21 3 11s800ms 3s933ms 22 1 4s57ms 4s57ms Oct 11 00 5 19s722ms 3s944ms 01 1 4s32ms 4s32ms 02 1 3s985ms 3s985ms 03 5 19s827ms 3s965ms 04 1 3s871ms 3s871ms 05 1 3s967ms 3s967ms 06 4 15s939ms 3s984ms 08 6 26s536ms 4s422ms 09 1 3s905ms 3s905ms 10 1 4s280ms 4s280ms 11 1 3s992ms 3s992ms 15 5 19s617ms 3s923ms 16 1 4s23ms 4s23ms 17 3 11s872ms 3s957ms 18 2 7s861ms 3s930ms 20 1 3s942ms 3s942ms Oct 12 04 2 8s111ms 4s55ms 07 3 11s829ms 3s943ms 09 3 11s887ms 3s962ms 11 2 7s673ms 3s836ms 12 1 3s912ms 3s912ms 13 1 4s9ms 4s9ms 15 1 3s907ms 3s907ms 16 1 3s895ms 3s895ms 22 2 7s778ms 3s889ms [ User: pubeu - Total duration: 10m27s - Times executed: 157 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1263173') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1263173') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-10-11 08:23:28 Duration: 6s282ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1263172') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1263172') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-10-06 21:18:02 Duration: 5s222ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1263172') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1263172') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-10-10 19:40:54 Duration: 5s150ms Database: ctdprd51 User: pubeu Bind query: yes
18 1s 12s398ms 3s869ms 122 7m52s select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Oct 06 02 1 1s302ms 1s302ms 03 1 1s166ms 1s166ms 05 2 4s463ms 2s231ms 06 3 3s448ms 1s149ms 08 3 10s563ms 3s521ms 09 1 1s220ms 1s220ms 10 3 5s68ms 1s689ms 11 1 1s321ms 1s321ms 12 2 2s431ms 1s215ms 14 2 9s528ms 4s764ms 16 1 2s191ms 2s191ms 17 2 3s474ms 1s737ms 21 3 3s477ms 1s159ms 22 1 1s46ms 1s46ms Oct 07 00 1 1s305ms 1s305ms 01 2 11s507ms 5s753ms 03 1 2s601ms 2s601ms 07 1 5s409ms 5s409ms 12 1 2s964ms 2s964ms 13 1 1s21ms 1s21ms 19 1 1s186ms 1s186ms 22 1 1s261ms 1s261ms 23 2 3s818ms 1s909ms Oct 08 02 2 11s475ms 5s737ms 04 1 4s729ms 4s729ms 08 4 6s806ms 1s701ms 10 1 1s368ms 1s368ms 12 1 2s729ms 2s729ms 13 2 7s643ms 3s821ms 17 3 27s625ms 9s208ms 23 1 1s308ms 1s308ms Oct 09 04 4 44s12ms 11s3ms 05 1 1s286ms 1s286ms 08 1 4s762ms 4s762ms 10 1 1s183ms 1s183ms 12 2 3s805ms 1s902ms 13 2 2s509ms 1s254ms 14 2 20s711ms 10s355ms 15 1 1s316ms 1s316ms 16 1 1s35ms 1s35ms 17 2 5s631ms 2s815ms 18 2 2s505ms 1s252ms 19 1 5s470ms 5s470ms 21 1 1s638ms 1s638ms Oct 10 00 2 11s462ms 5s731ms 04 1 2s635ms 2s635ms 05 2 24s656ms 12s328ms 07 1 1s313ms 1s313ms 09 2 2s135ms 1s67ms 10 1 1s329ms 1s329ms 11 1 2s974ms 2s974ms 12 3 18s272ms 6s90ms 14 1 5s93ms 5s93ms 22 1 1s244ms 1s244ms Oct 11 00 1 1s298ms 1s298ms 03 1 1s 1s 04 1 4s995ms 4s995ms 07 2 6s365ms 3s182ms 09 3 31s316ms 10s438ms 12 1 10s462ms 10s462ms 13 1 5s406ms 5s406ms 14 1 1s559ms 1s559ms 16 2 20s516ms 10s258ms 18 1 1s287ms 1s287ms 20 3 8s432ms 2s810ms 21 1 1s26ms 1s26ms 22 2 2s989ms 1s494ms Oct 12 01 1 6s311ms 6s311ms 02 1 2s971ms 2s971ms 04 1 4s799ms 4s799ms 05 1 10s238ms 10s238ms 07 2 3s472ms 1s736ms 10 1 1s32ms 1s32ms 11 2 12s934ms 6s467ms 12 1 1s235ms 1s235ms 13 1 5s546ms 5s546ms 14 1 6s310ms 6s310ms 16 1 5s573ms 5s573ms 17 1 2s579ms 2s579ms [ User: pubeu - Total duration: 3m33s - Times executed: 65 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2081060') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-10-11 09:29:03 Duration: 12s398ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2081060') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-10-11 09:29:00 Duration: 12s395ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2081060') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-10-10 05:27:04 Duration: 12s339ms Bind query: yes
19 1s11ms 33s383ms 2s763ms 120 5m31s select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Oct 06 04 1 1s519ms 1s519ms 05 1 12s668ms 12s668ms 10 1 1s116ms 1s116ms 11 1 1s960ms 1s960ms 16 1 20s959ms 20s959ms 19 1 1s541ms 1s541ms 21 1 7s385ms 7s385ms Oct 07 02 1 1s154ms 1s154ms 03 1 2s82ms 2s82ms 04 1 7s631ms 7s631ms 07 2 3s37ms 1s518ms 08 4 4s278ms 1s69ms 15 3 4s568ms 1s522ms 16 1 1s584ms 1s584ms 21 2 8s484ms 4s242ms 22 3 3s468ms 1s156ms Oct 08 02 2 2s962ms 1s481ms 03 1 1s28ms 1s28ms 06 5 10s723ms 2s144ms 07 12 21s379ms 1s781ms 09 1 2s109ms 2s109ms 10 12 27s502ms 2s291ms 12 1 4s535ms 4s535ms 17 1 1s924ms 1s924ms Oct 09 03 1 2s89ms 2s89ms 07 1 9s463ms 9s463ms 12 1 4s499ms 4s499ms 15 1 1s583ms 1s583ms 18 1 5s573ms 5s573ms 21 1 1s771ms 1s771ms Oct 10 00 2 2s255ms 1s127ms 07 1 7s352ms 7s352ms 10 10 21s849ms 2s184ms 11 3 6s416ms 2s138ms 12 1 1s888ms 1s888ms 23 1 3s705ms 3s705ms Oct 11 00 1 12s706ms 12s706ms 01 4 6s147ms 1s536ms 04 13 14s61ms 1s81ms 07 2 35s544ms 17s772ms 13 2 3s55ms 1s527ms 14 1 1s576ms 1s576ms 21 2 3s638ms 1s819ms 22 1 2s80ms 2s80ms Oct 12 04 2 5s607ms 2s803ms 05 1 2s953ms 2s953ms 10 3 10s999ms 3s666ms 12 1 4s414ms 4s414ms 14 1 1s380ms 1s380ms 16 1 1s421ms 1s421ms 17 1 1s957ms 1s957ms [ User: pubeu - Total duration: 2m41s - Times executed: 65 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2087863') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-10-11 07:27:55 Duration: 33s383ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2087266') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-10-06 16:35:27 Duration: 20s959ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2079065') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-10-11 00:29:02 Duration: 12s706ms Bind query: yes
20 1s26ms 6s222ms 2s41ms 112 3m48s select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where associatedterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Oct 07 18 1 1s344ms 1s344ms 20 1 1s349ms 1s349ms 21 3 5s466ms 1s822ms 22 1 6s119ms 6s119ms Oct 08 07 3 9s690ms 3s230ms 09 2 3s800ms 1s900ms 10 5 23s620ms 4s724ms 12 1 1s649ms 1s649ms 13 2 3s118ms 1s559ms 16 2 3s20ms 1s510ms 21 6 12s776ms 2s129ms Oct 09 00 3 4s941ms 1s647ms 01 3 4s479ms 1s493ms 02 4 6s12ms 1s503ms 03 4 13s474ms 3s368ms 05 3 11s590ms 3s863ms 11 1 1s313ms 1s313ms 19 1 1s339ms 1s339ms Oct 10 00 1 1s333ms 1s333ms 01 7 10s374ms 1s482ms 02 6 9s545ms 1s590ms 03 1 1s333ms 1s333ms 04 3 4s638ms 1s546ms 06 1 3s318ms 3s318ms 08 9 12s84ms 1s342ms 11 1 1s334ms 1s334ms 14 1 6s131ms 6s131ms 16 1 1s353ms 1s353ms 21 1 1s996ms 1s996ms 22 1 1s640ms 1s640ms Oct 11 06 1 1s351ms 1s351ms 07 1 1s644ms 1s644ms 10 1 1s665ms 1s665ms 11 4 5s595ms 1s398ms 12 9 19s701ms 2s189ms 13 1 1s652ms 1s652ms 17 3 4s919ms 1s639ms 18 1 1s334ms 1s334ms Oct 12 14 1 3s279ms 3s279ms 15 1 3s284ms 3s284ms 17 5 6s516ms 1s303ms 18 1 1s335ms 1s335ms 20 1 1s360ms 1s360ms 21 3 4s824ms 1s608ms [ User: pubeu - Total duration: 1m39s - Times executed: 49 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1395038'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-11 12:39:18 Duration: 6s222ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1395038'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-08 07:36:00 Duration: 6s166ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1395038'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-10-08 10:12:49 Duration: 6s161ms Database: ctdprd51 User: pubeu Bind query: yes
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 0ms 264 0ms 0ms 0ms ;Times Reported Time consuming bind #1
Day Hour Count Duration Avg duration Oct 06 05 4 0ms 0ms 12 6 0ms 0ms Oct 07 06 4 0ms 0ms 07 14 0ms 0ms 08 2 0ms 0ms 13 2 0ms 0ms 14 6 0ms 0ms 16 30 0ms 0ms 17 24 0ms 0ms Oct 08 00 1 0ms 0ms 07 2 0ms 0ms 08 2 0ms 0ms 10 2 0ms 0ms 14 10 0ms 0ms 16 18 0ms 0ms 17 4 0ms 0ms 18 12 0ms 0ms Oct 09 00 3 0ms 0ms 06 10 0ms 0ms 07 6 0ms 0ms 09 8 0ms 0ms 10 2 0ms 0ms 14 20 0ms 0ms Oct 10 06 6 0ms 0ms 07 2 0ms 0ms 08 4 0ms 0ms 13 2 0ms 0ms 16 10 0ms 0ms 17 2 0ms 0ms Oct 11 06 9 0ms 0ms 07 9 0ms 0ms 08 3 0ms 0ms 09 9 0ms 0ms 10 3 0ms 0ms 13 9 0ms 0ms 15 3 0ms 0ms Oct 13 00 1 0ms 0ms [ User: pubeu - Total duration: 7m47s - Times executed: 127 ]
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Date: Duration: 0ms Database: postgres User: ctdprd51 Remote: pubeu parameters: $1 = '2088408'
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Events
Log levels
Key values
- 110,070 Log entries
Events distribution
Key values
- 0 PANIC entries
- 4 FATAL entries
- 18 ERROR entries
- 0 WARNING entries
Most Frequent Errors/Events
Key values
- 16 Max number of times the same event was reported
- 22 Total events found
Rank Times reported Error 1 16 ERROR: syntax error in ts"..."
Times Reported Most Frequent Error / Event #1
Day Hour Count Oct 06 05 1 06 1 14 1 19 1 20 1 Oct 07 14 1 16 1 Oct 08 11 1 13 1 Oct 09 02 1 06 1 08 1 11 1 15 1 16 1 Oct 11 20 1 - ERROR: syntax error in ts"N C K K 666.COM"
- ERROR: syntax error in ts"3 & NMMN & YV7UHU & BN & G<FHG"
- ERROR: syntax error in ts"., & MNMEW4RBNM,.B/M<"
Statement: SELECT /* GeneBasicQueryDAO */ sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Symbol' THEN true ELSE false END isNameMatch ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,CASE WHEN UPPER(l.nm) = $1 THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE l.object_type_id = 4 AND t.object_type_id = 4 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 4 AND i.nm_fts @@ to_tsquery('common.english_nostops', $2) ) UNION ALL SELECT /* acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,false isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,1 relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 4 AND (upper( l.acc_txt ) = $3 ) ORDER BY 13,14 ) sq LIMIT 50
Date: 2024-10-06 05:09:19 Database: ctdprd51 Application: User: pubeu Remote:
Statement: SELECT /* GeneBasicQueryDAO */ sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Symbol' THEN true ELSE false END isNameMatch ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,CASE WHEN UPPER(l.nm) = $1 THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE l.object_type_id = 4 AND t.object_type_id = 4 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 4 AND i.nm_fts @@ to_tsquery('common.english_nostops', $2) ) UNION ALL SELECT /* acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,false isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,1 relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 4 AND (upper( l.acc_txt ) = $3 OR upper( l.acc_txt ) = $4 OR upper( l.acc_txt ) = $5 OR upper( l.acc_txt ) = $6 OR upper( l.acc_txt ) = $7 OR upper( l.acc_txt ) = $8 ) ORDER BY 13,14 ) sq LIMIT 50
Date: 2024-10-06 06:30:30
Statement: SELECT /* GeneBasicQueryDAO */ sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Symbol' THEN true ELSE false END isNameMatch ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,CASE WHEN UPPER(l.nm) = $1 THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE l.object_type_id = 4 AND t.object_type_id = 4 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 4 AND i.nm_fts @@ to_tsquery('common.english_nostops', $2) ) UNION ALL SELECT /* acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,false isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,1 relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 4 AND (upper( l.acc_txt ) = $3 OR upper( l.acc_txt ) = $4 OR upper( l.acc_txt ) = $5 ) ORDER BY 13,14 ) sq LIMIT 50
Date: 2024-10-06 14:58:21
2 4 FATAL: password authentication failed for user "..."
Times Reported Most Frequent Error / Event #2
Day Hour Count Oct 10 09 4 - FATAL: password authentication failed for user "load"
Detail: Connection matched pg_hba.conf line 85: "host all all 192.168.201.0/24 md5 "
Date: 2024-10-10 09:56:17
3 2 LOG: could not receive data from client: Connection reset by peer
Times Reported Most Frequent Error / Event #3
Day Hour Count Oct 10 10 2