pgBadger-
Global information
- Generated on Sun Aug 17 04:15:10 2025
- Log file: /project/archive/log/postgres/dbprd51/postgresql.log-20250816
- Parsed 3,689,873 log entries in 8s
- Log start from 2025-08-10 00:00:01 to 2025-08-16 23:58:21
-
Overview
Global Stats
- 290 Number of unique normalized queries
- 17,893 Number of queries
- 5d20h23m52s Total query duration
- 2025-08-10 00:01:14 First query
- 2025-08-16 23:58:14 Last query
- 24 queries/s at 2025-08-15 08:37:54 Query peak
- 5d20h23m52s Total query duration
- 45s96ms Prepare/parse total duration
- 0ms Bind total duration
- 5d20h23m7s Execute total duration
- 113,080 Number of events
- 47 Number of unique normalized events
- 100,734 Max number of times the same event was reported
- 0 Number of cancellation
- 87 Total number of automatic vacuums
- 214 Total number of automatic analyzes
- 18 Number temporary file
- 3.68 MiB Max size of temporary file
- 1.73 MiB Average size of temporary file
- 329,170 Total number of sessions
- 145 sessions at 2025-08-14 02:51:30 Session peak
- 308d11h58m54s Total duration of sessions
- 1m20s Average duration of sessions
- 0 Average queries per session
- 1s535ms Average queries duration per session
- 1m19s Average idle time per session
- 426,265 Total number of connections
- 108 connections/s at 2025-08-15 06:03:15 Connection peak
- 2 Total number of databases
SQL Traffic
Key values
- 24 queries/s Query Peak
- 2025-08-15 08:37:54 Date
SELECT Traffic
Key values
- 24 queries/s Query Peak
- 2025-08-15 08:37:54 Date
INSERT/UPDATE/DELETE Traffic
Key values
- 2 queries/s Query Peak
- 2025-08-15 06:36:55 Date
Queries duration
Key values
- 5d20h23m52s Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Aug 10 00 38 0ms 9m13s 37s161ms 21s863ms 4m31s 9m20s 01 68 0ms 5m46s 23s369ms 1m28s 3m34s 6m6s 02 34 0ms 18m35s 1m14s 31s826ms 4m38s 19m1s 03 33 0ms 9m53s 37s166ms 17s163ms 1m39s 9m53s 04 42 0ms 6m14s 44s286ms 1m36s 4m18s 6m37s 05 42 0ms 5m10s 19s721ms 21s163ms 34s798ms 5m10s 06 35 0ms 3m5s 14s581ms 20s399ms 26s239ms 3m5s 07 49 0ms 9m9s 36s933ms 28s317ms 5m5s 9m25s 08 60 0ms 3m35s 12s172ms 17s986ms 38s586ms 4m 09 103 0ms 5m54s 23s883ms 2m39s 5m41s 11m33s 10 49 0ms 4m35s 29s416ms 1m9s 4m17s 4m53s 11 39 0ms 9m56s 47s724ms 26s525ms 4m30s 9m56s 12 29 0ms 9m52s 56s312ms 32s159ms 5m12s 10m10s 13 30 0ms 5m18s 18s704ms 17s159ms 26s463ms 5m18s 14 18 0ms 5m6s 24s683ms 12s862ms 17s418ms 5m6s 15 15 0ms 3m39s 38s615ms 6s769ms 1m9s 3m51s 16 20 0ms 2m36s 23s123ms 7s125ms 13s892ms 5m33s 17 21 0ms 13m42s 1m37s 19s743ms 4m17s 13m42s 18 17 0ms 14m3s 2m30s 20s252ms 13m4s 14m3s 19 10 0ms 7s108ms 6s280ms 6s447ms 6s711ms 18s384ms 20 17 0ms 17s474ms 7s273ms 6s753ms 12s73ms 23s997ms 21 15 0ms 12s182ms 7s166ms 6s687ms 13s919ms 24s316ms 22 7 0ms 7s153ms 6s228ms 5s322ms 6s878ms 12s76ms 23 8 0ms 8s81ms 6s773ms 5s852ms 7s268ms 15s891ms Aug 11 00 15 0ms 9m7s 57s826ms 6s635ms 23s482ms 9m19s 01 9 0ms 11s253ms 6s854ms 5s272ms 6s874ms 20s707ms 02 9 0ms 7s935ms 6s693ms 6s609ms 6s802ms 14s817ms 03 9 0ms 4m57s 1m7s 6s627ms 14s208ms 4m57s 04 10 0ms 20s237ms 7s656ms 5s856ms 12s74ms 20s237ms 05 14 0ms 7s398ms 6s415ms 5s541ms 14s521ms 21s18ms 06 23 0ms 5m2s 30s987ms 11s827ms 2m17s 5m14s 07 25 0ms 10m7s 44s346ms 13s113ms 41s458ms 10m7s 08 16 0ms 1m11s 19s998ms 6s858ms 17s649ms 3m44s 09 9 0ms 25s799ms 8s766ms 5s868ms 14s332ms 25s799ms 10 24 0ms 18s623ms 6s790ms 11s343ms 12s738ms 18s623ms 11 8 0ms 18s564ms 8s45ms 5s930ms 12s128ms 18s564ms 12 18 0ms 4m12s 21s65ms 7s92ms 14s700ms 4m12s 13 19 0ms 3m31s 17s987ms 6s857ms 17s495ms 3m31s 14 18 0ms 24s517ms 8s612ms 11s540ms 17s372ms 24s517ms 15 22 0ms 18m41s 1m32s 13s704ms 3m44s 18m41s 16 12 0ms 7s115ms 6s502ms 6s648ms 7s103ms 19s912ms 17 8 0ms 1m10s 14s783ms 6s752ms 7s170ms 1m10s 18 11 0ms 5m29s 35s814ms 6s615ms 6s765ms 5m29s 19 16 0ms 7s453ms 6s451ms 6s747ms 12s122ms 14s623ms 20 9 0ms 24s557ms 8s754ms 6s703ms 6s868ms 24s557ms 21 8 0ms 10m3s 1m20s 5s804ms 6s878ms 10m3s 22 17 0ms 9m6s 1m35s 3m16s 4m8s 9m6s 23 14 0ms 56s966ms 10s707ms 7s274ms 17s121ms 56s966ms Aug 12 00 33 0ms 9m7s 23s489ms 13s943ms 21s159ms 9m14s 01 6 0ms 7s470ms 6s666ms 0ms 7s27ms 14s707ms 02 26 0ms 3m27s 14s961ms 12s835ms 27s699ms 3m27s 03 14 0ms 12s649ms 7s2ms 6s722ms 9s564ms 14s251ms 04 12 0ms 12s12ms 7s485ms 6s788ms 12s12ms 14s545ms 05 26 0ms 2m1s 11s338ms 6s843ms 17s733ms 2m23s 06 27 0ms 28s370ms 11s95ms 13s705ms 20s215ms 2m3s 07 18 0ms 3m56s 20s382ms 7s35ms 24s296ms 3m56s 08 27 0ms 17s566ms 9s736ms 22s748ms 24s375ms 39s599ms 09 28 0ms 12s111ms 7s120ms 12s144ms 14s798ms 23s364ms 10 30 0ms 9m25s 1m33s 17s670ms 6m8s 18m47s 11 21 0ms 5m8s 21s327ms 7s389ms 13s855ms 5m8s 12 33 0ms 5m33s 33s921ms 20s621ms 3m55s 5m33s 13 37 0ms 5m45s 23s238ms 19s243ms 25s981ms 5m57s 14 44 0ms 3m19s 12s762ms 22s332ms 24s361ms 3m19s 15 44 0ms 4m36s 26s807ms 48s992ms 2m50s 4m36s 16 40 0ms 9m23s 43s388ms 27s347ms 4m49s 9m23s 17 35 0ms 5m42s 26s920ms 20s812ms 2m7s 5m42s 18 73 0ms 9m24s 41s289ms 3m29s 4m14s 18m48s 19 47 0ms 6m31s 16s437ms 26s391ms 44s553ms 6m31s 20 51 0ms 10m10s 44s558ms 41s549ms 5m33s 10m10s 21 72 0ms 5m40s 20s993ms 33s378ms 3m20s 7m15s 22 67 0ms 18m59s 49s110ms 34s271ms 3m58s 19m26s 23 49 0ms 3m39s 13s87ms 20s256ms 25s577ms 3m39s Aug 13 00 39 0ms 9m22s 41s679ms 45s82ms 3m38s 9m37s 01 37 0ms 1m19s 10s246ms 13s754ms 19s981ms 1m59s 02 41 0ms 5m5s 37s417ms 26s73ms 4m23s 6m14s 03 53 0ms 5m23s 34s492ms 1m43s 4m35s 5m28s 04 63 0ms 18m48s 39s178ms 44s235ms 4m47s 19m3s 05 15 0ms 18s586ms 7s869ms 12s625ms 20s217ms 24s718ms 06 54 0ms 6m25s 25s296ms 44s425ms 3m45s 6m25s 07 78 0ms 6m9s 29s662ms 3m30s 4m25s 6m15s 08 74 0ms 9m25s 24s895ms 38s741ms 5m17s 9m25s 09 51 0ms 9m24s 45s82ms 1m1s 6m5s 9m24s 10 71 0ms 5m21s 15s464ms 25s505ms 1m50s 5m21s 11 81 0ms 3m30s 10s134ms 25s222ms 38s563ms 3m30s 12 49 0ms 5m37s 30s316ms 40s875ms 4m39s 5m44s 13 74 0ms 5m23s 15s421ms 31s418ms 1m51s 5m23s 14 50 0ms 6m43s 35s581ms 2m17s 3m58s 7m 15 74 0ms 4m29s 11s987ms 25s571ms 37s398ms 4m29s 16 48 0ms 5m43s 33s3ms 25s359ms 5m8s 5m59s 17 89 0ms 19m8s 26s334ms 1m 3m23s 19m14s 18 67 0ms 9m43s 23s492ms 44s328ms 1m46s 9m43s 19 76 0ms 19m17s 48s525ms 3m41s 6m7s 19m24s 20 53 0ms 9m39s 23s260ms 25s44ms 49s296ms 9m47s 21 70 0ms 9m30s 24s145ms 25s60ms 5m16s 9m30s 22 59 0ms 9m29s 28s332ms 27s422ms 4m25s 9m29s 23 659 0ms 20m1s 21s113ms 15m35s 25m31s 40m9s Aug 14 00 750 0ms 19m5s 40s969ms 25m19s 55m7s 1h15m46s 01 62 0ms 5m6s 20s342ms 27s974ms 3m26s 5m12s 02 50 0ms 5m14s 42s376ms 40s686ms 5m14s 10m56s 03 50 0ms 2m6s 10s380ms 19s370ms 38s732ms 2m6s 04 57 0ms 5m4s 15s668ms 33s504ms 54s662ms 5m4s 05 143 0ms 3m49s 9s554ms 55s374ms 1m32s 3m56s 06 59 0ms 5m20s 12s186ms 20s781ms 27s197ms 5m33s 07 35 0ms 5m12s 22s251ms 19s499ms 27s602ms 5m12s 08 47 0ms 27s265ms 8s736ms 17s335ms 32s883ms 39s980ms 09 91 0ms 19m4s 24s763ms 45s173ms 3m2s 19m4s 10 32 0ms 3m45s 21s336ms 14s776ms 26s69ms 4m14s 11 47 0ms 9m16s 28s951ms 27s208ms 2m15s 9m37s 12 26 0ms 11m4s 32s517ms 13s191ms 20s464ms 11m4s 13 18 0ms 3m40s 18s357ms 8s18ms 13s312ms 3m40s 14 17 0ms 25s419ms 9s175ms 7s6ms 17s515ms 34s895ms 15 51 0ms 1m42s 16s8ms 14s863ms 2m2s 5m6s 16 511 0ms 10m13s 38s488ms 17m27s 38m5s 53m45s 17 15 0ms 25s506ms 9s329ms 11s440ms 17s577ms 25s506ms 18 25 0ms 12s471ms 6s502ms 9s259ms 14s328ms 1m2s 19 45 0ms 11s851ms 6s913ms 13s962ms 19s48ms 33s850ms 20 38 0ms 8s590ms 6s499ms 16s200ms 18s426ms 26s548ms 21 11 0ms 7s658ms 6s43ms 5s643ms 11s174ms 17s510ms 22 49 0ms 31s761ms 7s59ms 14s934ms 28s630ms 1m27s 23 60 0ms 15s824ms 6s97ms 20s222ms 30s155ms 1m30s Aug 15 00 45 0ms 9m29s 22s373ms 15s184ms 40s965ms 9m47s 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 2,032 0ms 2m33s 14s503ms 34m17s 37m58s 42m17s 06 4,926 5s13ms 47m36s 22s588ms 1h11m57s 1h16m53s 1h44m20s 07 1,735 0ms 53m2s 48s365ms 1h9m44s 1h14m50s 2h10m16s 08 2,463 0ms 10m30s 12s925ms 25m8s 31m47s 36m53s 09 87 0ms 36m49s 8m5s 41m44s 1h30m21s 2h12m45s 10 50 0ms 18m21s 2m30s 18m14s 18m21s 18m38s 11 59 0ms 19m34s 2m12s 18m21s 19m33s 19m45s 12 49 0ms 18m18s 1m58s 9m6s 18m3s 18m23s 13 25 0ms 18m20s 1m13s 16s960ms 22s786ms 18m20s 14 12 0ms 18m18s 3m56s 21s99ms 9m16s 18m18s 15 4 0ms 11s446ms 7s122ms 0ms 5s76ms 17s715ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 0 0ms 0ms 0ms 0ms 0ms 0ms 19 7 0ms 6s730ms 6s649ms 0ms 0ms 46s544ms 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 19 0ms 9s909ms 8s388ms 19s406ms 29s134ms 1m22s 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms Aug 16 00 2 0ms 9m10s 4m38s 0ms 0ms 9m16s 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 5 0ms 13s41ms 7s943ms 0ms 14s492ms 20s183ms 06 2 0ms 7s210ms 7s121ms 0ms 7s32ms 7s210ms 07 5 0ms 7s132ms 6s475ms 6s203ms 7s132ms 12s104ms 08 4 0ms 1m54s 34s111ms 7s89ms 7s823ms 1m54s 09 2 0ms 7s231ms 7s90ms 0ms 6s950ms 7s231ms 10 4 0ms 9s237ms 8s154ms 0ms 7s213ms 18s273ms 11 2 0ms 7s147ms 7s142ms 0ms 7s136ms 7s147ms 12 2 0ms 7s232ms 7s97ms 0ms 6s962ms 7s232ms 13 3 0ms 7s82ms 6s385ms 0ms 7s82ms 12s72ms 14 3 0ms 7s243ms 6s666ms 0ms 7s176ms 7s243ms 15 2 0ms 7s225ms 7s151ms 0ms 7s78ms 7s225ms 16 3 0ms 7s218ms 6s402ms 0ms 6s903ms 12s302ms 17 2 0ms 6s858ms 6s842ms 0ms 6s827ms 6s858ms 18 5 0ms 7s149ms 6s54ms 0ms 5s44ms 14s223ms 19 2 0ms 7s278ms 7s190ms 0ms 7s102ms 7s278ms 20 3 0ms 7s215ms 6s477ms 0ms 0ms 12s216ms 21 2 0ms 7s12ms 6s933ms 0ms 0ms 13s867ms 22 2 0ms 7s106ms 7s6ms 0ms 6s907ms 7s106ms 23 9 0ms 9s447ms 8s696ms 0ms 14s261ms 1m4s Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Aug 10 00 37 0 37s971ms 13s356ms 21s863ms 4m52s 01 68 0 23s369ms 20s222ms 1m28s 3m54s 02 34 0 1m14s 13s556ms 31s826ms 6m33s 03 33 0 37s166ms 12s297ms 17s163ms 4m57s 04 42 0 44s286ms 18s435ms 1m36s 5m7s 05 42 0 19s721ms 11s674ms 21s163ms 3m36s 06 35 0 14s581ms 11s380ms 20s399ms 27s793ms 07 49 0 36s933ms 14s177ms 28s317ms 9m16s 08 60 0 12s172ms 13s255ms 17s986ms 3m35s 09 103 0 23s883ms 17s953ms 2m39s 7m20s 10 49 0 29s416ms 19s434ms 1m9s 4m21s 11 39 0 47s724ms 12s700ms 26s525ms 4m48s 12 29 0 56s312ms 8s924ms 32s159ms 6m28s 13 30 0 18s704ms 6s921ms 17s159ms 30s783ms 14 18 0 24s683ms 6s584ms 12s862ms 24s786ms 15 15 0 38s615ms 5s178ms 6s769ms 3m27s 16 20 0 23s123ms 6s618ms 7s125ms 19s825ms 17 21 0 1m37s 6s815ms 19s743ms 13m31s 18 17 0 2m30s 6s716ms 20s252ms 14m3s 19 10 0 6s280ms 0ms 6s447ms 18s384ms 20 17 0 7s273ms 5s674ms 6s753ms 14s473ms 21 15 0 7s166ms 5s152ms 6s687ms 24s316ms 22 7 0 6s228ms 0ms 5s322ms 7s153ms 23 8 0 6s773ms 0ms 5s852ms 11s971ms Aug 11 00 14 0 1m1s 0ms 6s635ms 3m54s 01 9 0 6s854ms 0ms 5s272ms 11s253ms 02 9 0 6s693ms 0ms 6s609ms 13s651ms 03 9 0 1m7s 0ms 6s627ms 4m21s 04 10 0 7s656ms 0ms 5s856ms 14s121ms 05 14 0 6s415ms 0ms 5s541ms 14s614ms 06 23 0 30s987ms 6s743ms 11s827ms 2m19s 07 25 0 44s346ms 6s709ms 13s113ms 5m2s 08 16 0 19s998ms 0ms 6s858ms 17s930ms 09 9 0 8s766ms 0ms 5s868ms 14s485ms 10 24 0 6s790ms 6s549ms 11s343ms 14s284ms 11 8 0 8s45ms 0ms 5s930ms 14s712ms 12 18 0 21s65ms 6s513ms 7s92ms 14s860ms 13 19 0 17s987ms 5s890ms 6s857ms 21s5ms 14 18 0 8s612ms 6s381ms 11s540ms 17s389ms 15 22 0 1m32s 6s691ms 13s704ms 9m6s 16 12 0 6s502ms 0ms 6s648ms 19s912ms 17 8 0 14s783ms 0ms 6s752ms 7s212ms 18 11 0 35s814ms 5s177ms 6s615ms 5m29s 19 16 0 6s451ms 5s902ms 6s747ms 13s467ms 20 9 0 8s754ms 0ms 6s703ms 14s418ms 21 8 0 1m20s 0ms 5s804ms 10m3s 22 17 0 1m35s 6s785ms 3m16s 9m6s 23 14 0 10s707ms 6s77ms 7s274ms 56s966ms Aug 12 00 32 0 24s1ms 6s944ms 13s943ms 30s843ms 01 6 0 6s666ms 0ms 0ms 11s527ms 02 26 0 14s961ms 6s772ms 12s835ms 32s921ms 03 14 0 7s2ms 5s792ms 6s722ms 12s649ms 04 12 0 7s485ms 0ms 6s788ms 12s936ms 05 26 0 11s338ms 6s99ms 6s843ms 28s173ms 06 27 0 11s95ms 6s668ms 13s705ms 34s17ms 07 18 0 20s382ms 6s56ms 7s35ms 34s458ms 08 27 0 9s736ms 7s72ms 22s748ms 34s933ms 09 28 0 7s120ms 6s965ms 12s144ms 16s841ms 10 30 0 1m33s 7s198ms 17s670ms 18m42s 11 21 0 21s327ms 6s500ms 7s389ms 24s304ms 12 33 0 33s921ms 8s673ms 20s621ms 3m58s 13 37 0 23s238ms 12s6ms 19s243ms 3m45s 14 44 0 12s762ms 12s263ms 22s332ms 27s45ms 15 44 0 26s807ms 17s640ms 48s992ms 3m38s 16 40 0 43s388ms 14s750ms 27s347ms 5m11s 17 35 0 26s920ms 11s859ms 20s812ms 4m7s 18 73 0 41s289ms 30s340ms 3m29s 5m12s 19 47 0 16s437ms 12s806ms 26s391ms 53s622ms 20 51 0 44s558ms 13s245ms 41s549ms 9m20s 21 72 0 20s993ms 24s851ms 33s378ms 3m54s 22 67 0 49s110ms 19s377ms 34s271ms 18m48s 23 49 0 13s87ms 13s343ms 20s256ms 34s203ms Aug 13 00 38 0 42s576ms 12s552ms 45s82ms 5m19s 01 37 0 10s246ms 11s861ms 13s754ms 26s611ms 02 41 0 37s417ms 12s725ms 26s73ms 5m5s 03 53 0 34s492ms 15s39ms 1m43s 5m8s 04 63 0 39s178ms 21s762ms 44s235ms 5m13s 05 15 0 7s869ms 0ms 12s625ms 24s718ms 06 54 0 25s296ms 18s285ms 44s425ms 4m25s 07 78 0 29s662ms 18s615ms 3m30s 5m54s 08 74 0 24s895ms 25s428ms 38s741ms 6m23s 09 51 0 45s82ms 14s714ms 1m1s 6m7s 10 71 0 15s464ms 18s549ms 25s505ms 3m23s 11 81 0 10s134ms 17s706ms 25s222ms 1m42s 12 49 0 30s316ms 15s64ms 40s875ms 5m8s 13 74 0 15s421ms 18s930ms 31s418ms 3m10s 14 50 0 35s581ms 14s83ms 2m17s 5m25s 15 74 0 11s987ms 16s783ms 25s571ms 2m23s 16 48 0 33s3ms 12s450ms 25s359ms 5m50s 17 89 0 26s334ms 26s913ms 1m 3m52s 18 67 0 23s492ms 24s870ms 44s328ms 5m37s 19 76 0 48s525ms 21s415ms 3m41s 9m34s 20 53 0 23s260ms 13s736ms 25s44ms 4m22s 21 70 0 24s145ms 17s359ms 25s60ms 5m53s 22 59 0 28s332ms 18s737ms 27s422ms 6m44s 23 657 0 21s155ms 5m57s 15m35s 28m46s Aug 14 00 748 0 41s61ms 15m42s 25m19s 1h9m47s 01 62 0 20s342ms 16s686ms 27s974ms 5m 02 50 0 42s376ms 25s214ms 40s686ms 5m15s 03 50 0 10s380ms 12s664ms 19s370ms 41s915ms 04 57 0 15s668ms 17s797ms 33s504ms 2m10s 05 143 0 9s554ms 35s455ms 55s374ms 1m35s 06 59 0 12s186ms 13s367ms 20s781ms 55s830ms 07 35 0 22s251ms 7s798ms 19s499ms 3m45s 08 47 0 8s736ms 13s233ms 17s335ms 35s650ms 09 91 0 24s763ms 21s116ms 45s173ms 3m26s 10 32 0 21s336ms 12s269ms 14s776ms 3m36s 11 47 0 28s951ms 12s670ms 27s208ms 5m10s 12 26 0 32s517ms 5s865ms 13s191ms 25s730ms 13 18 0 18s357ms 5s609ms 8s18ms 14s637ms 14 17 0 9s175ms 5s526ms 7s6ms 25s419ms 15 51 0 16s8ms 6s992ms 14s863ms 2m51s 16 511 0 38s488ms 11m7s 17m27s 52m56s 17 15 0 9s329ms 5s132ms 11s440ms 17s681ms 18 25 0 6s502ms 5s160ms 9s259ms 15s931ms 19 45 0 6s913ms 10s533ms 13s962ms 29s585ms 20 38 0 6s499ms 8s442ms 16s200ms 19s681ms 21 11 0 6s43ms 0ms 5s643ms 14s965ms 22 49 0 7s59ms 7s66ms 14s934ms 1m13s 23 60 0 6s97ms 10s665ms 20s222ms 32s608ms Aug 15 00 44 0 22s727ms 5s71ms 15s184ms 4m24s 01 0 0 0ms 0ms 0ms 0ms 02 0 0 0ms 0ms 0ms 0ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 1,951 0 14s612ms 31m3s 33m51s 41m20s 06 4,725 0 22s968ms 30m57s 1h11m43s 1h16m27s 07 1,671 0 49s660ms 47m15s 1h8m48s 1h18m46s 08 2,385 0 13s57ms 21m48s 24m49s 31m35s 09 84 0 8m22s 19m5s 41m44s 1h46m19s 10 50 0 2m30s 23s458ms 18m14s 18m33s 11 59 0 2m12s 24s456ms 18m21s 19m42s 12 49 0 1m58s 22s659ms 9m6s 18m21s 13 25 0 1m13s 11s834ms 16s960ms 8m59s 14 12 0 3m56s 0ms 21s99ms 18m18s 15 4 0 7s122ms 0ms 0ms 17s715ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 0 0ms 0ms 0ms 0ms 19 7 0 6s649ms 0ms 0ms 46s544ms 20 0 0 0ms 0ms 0ms 0ms 21 19 0 8s388ms 0ms 19s406ms 1m22s 22 0 0 0ms 0ms 0ms 0ms 23 0 0 0ms 0ms 0ms 0ms Aug 16 00 1 0 9m10s 0ms 0ms 9m10s 01 0 0 0ms 0ms 0ms 0ms 02 0 0 0ms 0ms 0ms 0ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 5 0 7s943ms 0ms 0ms 20s183ms 06 2 0 7s121ms 0ms 0ms 7s210ms 07 5 0 6s475ms 0ms 6s203ms 12s104ms 08 4 0 34s111ms 0ms 7s89ms 1m54s 09 2 0 7s90ms 0ms 0ms 7s231ms 10 4 0 8s154ms 0ms 0ms 18s273ms 11 2 0 7s142ms 0ms 0ms 7s147ms 12 2 0 7s97ms 0ms 0ms 7s232ms 13 3 0 6s385ms 0ms 0ms 12s72ms 14 3 0 6s666ms 0ms 0ms 7s243ms 15 2 0 7s151ms 0ms 0ms 7s225ms 16 3 0 6s402ms 0ms 0ms 12s302ms 17 2 0 6s842ms 0ms 0ms 6s858ms 18 5 0 6s54ms 0ms 0ms 14s223ms 19 2 0 7s190ms 0ms 0ms 7s278ms 20 3 0 6s477ms 0ms 0ms 12s216ms 21 2 0 6s933ms 0ms 0ms 13s867ms 22 2 0 7s6ms 0ms 0ms 7s106ms 23 9 0 8s696ms 0ms 0ms 1m4s Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Aug 10 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Aug 11 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Aug 12 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Aug 13 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Aug 14 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Aug 15 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Aug 16 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare Aug 10 00 0 36 36.00 0.00% 01 0 68 68.00 0.00% 02 0 34 34.00 0.00% 03 0 33 33.00 0.00% 04 0 42 42.00 0.00% 05 0 42 42.00 0.00% 06 0 35 35.00 0.00% 07 0 52 52.00 0.00% 08 0 62 62.00 0.00% 09 0 104 104.00 0.00% 10 0 49 49.00 0.00% 11 0 39 39.00 0.00% 12 0 29 29.00 0.00% 13 0 30 30.00 0.00% 14 0 18 18.00 0.00% 15 0 15 15.00 0.00% 16 0 20 20.00 0.00% 17 0 21 21.00 0.00% 18 0 17 17.00 0.00% 19 0 10 10.00 0.00% 20 0 17 17.00 0.00% 21 0 15 15.00 0.00% 22 0 7 7.00 0.00% 23 0 8 8.00 0.00% Aug 11 00 0 13 13.00 0.00% 01 0 9 9.00 0.00% 02 0 9 9.00 0.00% 03 0 9 9.00 0.00% 04 0 10 10.00 0.00% 05 0 15 15.00 0.00% 06 0 23 23.00 0.00% 07 0 25 25.00 0.00% 08 0 16 16.00 0.00% 09 0 9 9.00 0.00% 10 0 24 24.00 0.00% 11 0 8 8.00 0.00% 12 0 18 18.00 0.00% 13 0 19 19.00 0.00% 14 0 18 18.00 0.00% 15 0 22 22.00 0.00% 16 0 12 12.00 0.00% 17 0 8 8.00 0.00% 18 0 11 11.00 0.00% 19 0 16 16.00 0.00% 20 0 9 9.00 0.00% 21 0 8 8.00 0.00% 22 0 17 17.00 0.00% 23 0 14 14.00 0.00% Aug 12 00 0 31 31.00 0.00% 01 0 6 6.00 0.00% 02 0 26 26.00 0.00% 03 0 14 14.00 0.00% 04 0 12 12.00 0.00% 05 0 26 26.00 0.00% 06 0 28 28.00 0.00% 07 0 18 18.00 0.00% 08 0 27 27.00 0.00% 09 0 28 28.00 0.00% 10 0 30 30.00 0.00% 11 0 21 21.00 0.00% 12 0 33 33.00 0.00% 13 0 37 37.00 0.00% 14 0 44 44.00 0.00% 15 0 44 44.00 0.00% 16 0 40 40.00 0.00% 17 0 35 35.00 0.00% 18 0 73 73.00 0.00% 19 0 47 47.00 0.00% 20 0 51 51.00 0.00% 21 0 72 72.00 0.00% 22 0 67 67.00 0.00% 23 0 49 49.00 0.00% Aug 13 00 0 37 37.00 0.00% 01 0 37 37.00 0.00% 02 0 41 41.00 0.00% 03 0 53 53.00 0.00% 04 0 63 63.00 0.00% 05 0 15 15.00 0.00% 06 0 54 54.00 0.00% 07 0 78 78.00 0.00% 08 0 74 74.00 0.00% 09 0 51 51.00 0.00% 10 0 70 70.00 0.00% 11 0 81 81.00 0.00% 12 0 49 49.00 0.00% 13 0 74 74.00 0.00% 14 0 50 50.00 0.00% 15 0 73 73.00 0.00% 16 0 48 48.00 0.00% 17 0 89 89.00 0.00% 18 0 67 67.00 0.00% 19 0 75 75.00 0.00% 20 0 53 53.00 0.00% 21 0 70 70.00 0.00% 22 0 59 59.00 0.00% 23 2 657 328.50 0.30% Aug 14 00 0 748 748.00 0.00% 01 1 59 59.00 1.61% 02 0 50 50.00 0.00% 03 0 50 50.00 0.00% 04 0 57 57.00 0.00% 05 0 142 142.00 0.00% 06 0 58 58.00 0.00% 07 0 36 36.00 0.00% 08 0 47 47.00 0.00% 09 0 91 91.00 0.00% 10 0 32 32.00 0.00% 11 0 46 46.00 0.00% 12 0 25 25.00 0.00% 13 0 18 18.00 0.00% 14 0 15 15.00 0.00% 15 0 51 51.00 0.00% 16 0 511 511.00 0.00% 17 0 13 13.00 0.00% 18 0 25 25.00 0.00% 19 0 45 45.00 0.00% 20 0 38 38.00 0.00% 21 0 11 11.00 0.00% 22 0 48 48.00 0.00% 23 0 60 60.00 0.00% Aug 15 00 0 43 43.00 0.00% 01 0 0 0.00 0.00% 02 0 0 0.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 2,038 2,038.00 0.00% 06 0 4,934 4,934.00 0.00% 07 0 1,741 1,741.00 0.00% 08 0 2,474 2,474.00 0.00% 09 0 86 86.00 0.00% 10 0 50 50.00 0.00% 11 0 61 61.00 0.00% 12 0 54 54.00 0.00% 13 0 26 26.00 0.00% 14 0 13 13.00 0.00% 15 0 4 4.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 7 7.00 0.00% 20 0 0 0.00 0.00% 21 0 19 19.00 0.00% 22 0 0 0.00 0.00% 23 0 0 0.00 0.00% Aug 16 00 0 0 0.00 0.00% 01 0 0 0.00 0.00% 02 0 0 0.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 5 5.00 0.00% 06 0 2 2.00 0.00% 07 0 5 5.00 0.00% 08 0 4 4.00 0.00% 09 0 2 2.00 0.00% 10 0 4 4.00 0.00% 11 0 2 2.00 0.00% 12 0 2 2.00 0.00% 13 0 3 3.00 0.00% 14 0 3 3.00 0.00% 15 0 2 2.00 0.00% 16 0 3 3.00 0.00% 17 0 2 2.00 0.00% 18 0 5 5.00 0.00% 19 0 2 2.00 0.00% 20 0 3 3.00 0.00% 21 0 2 2.00 0.00% 22 0 2 2.00 0.00% 23 0 9 9.00 0.00% Day Hour Count Average / Second Aug 10 00 263 0.07/s 01 344 0.10/s 02 295 0.08/s 03 242 0.07/s 04 790 0.22/s 05 338 0.09/s 06 267 0.07/s 07 548 0.15/s 08 638 0.18/s 09 387 0.11/s 10 274 0.08/s 11 303 0.08/s 12 168 0.05/s 13 361 0.10/s 14 291 0.08/s 15 323 0.09/s 16 200 0.06/s 17 169 0.05/s 18 104 0.03/s 19 98 0.03/s 20 110 0.03/s 21 104 0.03/s 22 245 0.07/s 23 770 0.21/s Aug 11 00 475 0.13/s 01 446 0.12/s 02 653 0.18/s 03 501 0.14/s 04 521 0.14/s 05 436 0.12/s 06 459 0.13/s 07 987 0.27/s 08 423 0.12/s 09 351 0.10/s 10 133 0.04/s 11 223 0.06/s 12 212 0.06/s 13 263 0.07/s 14 193 0.05/s 15 306 0.09/s 16 126 0.04/s 17 164 0.05/s 18 151 0.04/s 19 171 0.05/s 20 129 0.04/s 21 112 0.03/s 22 153 0.04/s 23 122 0.03/s Aug 12 00 241 0.07/s 01 145 0.04/s 02 286 0.08/s 03 157 0.04/s 04 239 0.07/s 05 322 0.09/s 06 2,062 0.57/s 07 487 0.14/s 08 1,079 0.30/s 09 323 0.09/s 10 411 0.11/s 11 407 0.11/s 12 626 0.17/s 13 960 0.27/s 14 1,182 0.33/s 15 999 0.28/s 16 1,217 0.34/s 17 1,289 0.36/s 18 1,410 0.39/s 19 1,028 0.29/s 20 1,285 0.36/s 21 1,495 0.42/s 22 947 0.26/s 23 693 0.19/s Aug 13 00 1,156 0.32/s 01 762 0.21/s 02 1,248 0.35/s 03 1,454 0.40/s 04 3,054 0.85/s 05 1,339 0.37/s 06 4,491 1.25/s 07 6,112 1.70/s 08 5,519 1.53/s 09 2,423 0.67/s 10 4,715 1.31/s 11 6,552 1.82/s 12 6,085 1.69/s 13 6,871 1.91/s 14 7,731 2.15/s 15 6,518 1.81/s 16 6,202 1.72/s 17 7,137 1.98/s 18 6,548 1.82/s 19 6,214 1.73/s 20 6,741 1.87/s 21 8,258 2.29/s 22 7,826 2.17/s 23 9,079 2.52/s Aug 14 00 7,361 2.04/s 01 7,681 2.13/s 02 6,844 1.90/s 03 6,409 1.78/s 04 6,547 1.82/s 05 9,865 2.74/s 06 7,898 2.19/s 07 7,340 2.04/s 08 6,389 1.77/s 09 6,930 1.93/s 10 5,400 1.50/s 11 7,038 1.96/s 12 6,775 1.88/s 13 6,434 1.79/s 14 6,402 1.78/s 15 6,430 1.79/s 16 7,850 2.18/s 17 6,251 1.74/s 18 7,153 1.99/s 19 8,789 2.44/s 20 8,081 2.24/s 21 7,800 2.17/s 22 4,957 1.38/s 23 2,145 0.60/s Aug 15 00 1,562 0.43/s 01 79 0.02/s 02 80 0.02/s 03 80 0.02/s 04 78 0.02/s 05 2,125 0.59/s 06 72,979 20.27/s 07 19,869 5.52/s 08 2,386 0.66/s 09 235 0.07/s 10 140 0.04/s 11 163 0.05/s 12 130 0.04/s 13 113 0.03/s 14 92 0.03/s 15 102 0.03/s 16 75 0.02/s 17 77 0.02/s 18 78 0.02/s 19 81 0.02/s 20 76 0.02/s 21 78 0.02/s 22 76 0.02/s 23 78 0.02/s Aug 16 00 79 0.02/s 01 79 0.02/s 02 82 0.02/s 03 91 0.03/s 04 78 0.02/s 05 100 0.03/s 06 80 0.02/s 07 79 0.02/s 08 76 0.02/s 09 81 0.02/s 10 80 0.02/s 11 80 0.02/s 12 83 0.02/s 13 82 0.02/s 14 80 0.02/s 15 82 0.02/s 16 83 0.02/s 17 79 0.02/s 18 82 0.02/s 19 83 0.02/s 20 86 0.02/s 21 104 0.03/s 22 84 0.02/s 23 84 0.02/s Day Hour Count Average Duration Average idle time Aug 10 00 263 9m21s 9m15s 01 344 6m56s 6m52s 02 295 8m29s 8m20s 03 241 10m9s 10m4s 04 791 3m8s 3m6s 05 338 6m56s 6m54s 06 267 9m5s 9m3s 07 548 4m30s 4m27s 08 638 3m42s 3m41s 09 387 6m28s 6m22s 10 273 8m43s 8m37s 11 304 8m1s 7m55s 12 168 14m35s 14m25s 13 361 6m15s 6m13s 14 291 8m24s 8m23s 15 323 7m33s 7m31s 16 200 11m34s 11m32s 17 167 14m28s 14m16s 18 105 22m48s 22m23s 19 98 25m8s 25m7s 20 111 21m44s 21m43s 21 104 21m49s 21m48s 22 245 10m13s 10m13s 23 769 3m11s 3m11s Aug 11 00 476 5m8s 5m7s 01 446 5m31s 5m31s 02 653 3m43s 3m43s 03 501 4m55s 4m53s 04 521 4m40s 4m40s 05 435 5m27s 5m26s 06 460 5m16s 5m14s 07 987 2m22s 2m21s 08 423 11m26s 11m25s 09 351 6m55s 6m55s 10 133 17m41s 17m40s 11 223 11m 11m 12 212 10m57s 10m55s 13 261 9m13s 9m12s 14 195 12m38s 12m38s 15 306 8m8s 8m1s 16 126 18m15s 18m14s 17 164 15m8s 15m7s 18 151 16m34s 16m31s 19 171 13m52s 13m51s 20 129 17m29s 17m29s 21 112 19m45s 19m39s 22 153 15m41s 15m30s 23 122 20m4s 20m3s Aug 12 00 241 10m9s 10m5s 01 145 16m26s 16m26s 02 286 8m37s 8m36s 03 157 14m59s 14m58s 04 239 10m7s 10m7s 05 322 7m35s 7m35s 06 2,062 3m49s 3m49s 07 487 5m6s 5m5s 08 1,079 2m18s 2m18s 09 323 7m27s 7m27s 10 411 5m58s 5m51s 11 407 5m26s 5m25s 12 624 3m58s 3m56s 13 962 2m32s 2m31s 14 1,181 2m5s 2m5s 15 1,000 2m28s 2m27s 16 1,215 1m58s 1m56s 17 1,291 1m52s 1m51s 18 1,410 1m48s 1m46s 19 1,027 2m22s 2m21s 20 1,286 3m17s 3m15s 21 1,494 1m40s 1m39s 22 948 2m37s 2m34s 23 692 3m33s 3m32s Aug 13 00 1,157 2m3s 2m1s 01 762 3m8s 3m8s 02 1,248 2m13s 2m12s 03 1,452 1m40s 1m39s 04 3,054 49s404ms 48s596ms 05 1,340 2m4s 2m3s 06 4,491 42s420ms 42s115ms 07 6,113 25s725ms 25s347ms 08 5,517 28s165ms 27s831ms 09 2,425 1m2s 1m1s 10 4,706 30s136ms 29s902ms 11 6,547 23s214ms 23s88ms 12 6,083 24s826ms 24s582ms 13 6,852 29s248ms 29s81ms 14 7,741 20s105ms 19s875ms 15 6,510 22s987ms 22s851ms 16 6,199 28s836ms 28s580ms 17 7,135 22s481ms 22s152ms 18 6,539 23s698ms 23s457ms 19 6,216 26s711ms 26s117ms 20 6,739 22s624ms 22s441ms 21 8,248 17s989ms 17s784ms 22 7,827 19s505ms 19s291ms 23 8,375 24s665ms 23s3ms Aug 14 00 6,402 28s802ms 24s3ms 01 7,675 21s303ms 21s139ms 02 6,840 22s723ms 22s414ms 03 6,406 25s967ms 25s886ms 04 6,544 23s986ms 23s849ms 05 9,835 16s958ms 16s819ms 06 7,879 20s241ms 20s150ms 07 7,338 20s628ms 20s521ms 08 6,387 23s473ms 23s409ms 09 6,925 20s938ms 20s612ms 10 5,402 28s308ms 28s182ms 11 7,036 27s34ms 26s841ms 12 6,777 22s773ms 22s648ms 13 6,433 23s432ms 23s380ms 14 6,397 23s533ms 23s509ms 15 6,425 26s480ms 26s353ms 16 7,516 25s739ms 23s122ms 17 6,250 24s439ms 24s416ms 18 7,153 21s193ms 21s170ms 19 8,787 17s339ms 17s304ms 20 8,080 17s925ms 17s895ms 21 7,799 18s336ms 18s328ms 22 4,956 36s943ms 36s873ms 23 2,143 1m9s 1m9s Aug 15 00 1,517 2m2s 2m1s 01 79 32m35s 32m35s 02 80 30m40s 30m40s 03 80 30m40s 30m40s 04 78 30m39s 30m39s 05 190 17m32s 14m57s 06 114 27m17s 11m1s 07 187 34m15s 26m46s 08 1,943 5m17s 5m1s 09 250 11m27s 8m38s 10 141 18m9s 17m16s 11 164 14m31s 13m43s 12 131 16m56s 16m11s 13 112 22m8s 21m52s 14 93 25m59s 25m29s 15 102 26m5s 26m4s 16 75 32m2s 32m2s 17 77 31m53s 31m53s 18 78 31m18s 31m18s 19 81 30m6s 30m6s 20 76 31m11s 31m11s 21 78 29m25s 29m23s 22 76 31m33s 31m33s 23 78 30m29s 30m29s Aug 16 00 79 31m3s 30m56s 01 79 30m33s 30m33s 02 82 29m49s 29m49s 03 91 25m48s 25m48s 04 78 30m42s 30m42s 05 100 24m3s 24m3s 06 80 29m59s 29m59s 07 79 29m54s 29m53s 08 76 29m43s 29m42s 09 81 30m15s 30m15s 10 80 29m17s 29m17s 11 80 29m52s 29m52s 12 83 29m6s 29m6s 13 83 50m36s 50m35s 14 80 29m58s 29m58s 15 82 29m50s 29m50s 16 83 29m13s 29m13s 17 79 30m9s 30m9s 18 82 29m54s 29m53s 19 83 28m56s 28m56s 20 86 27m25s 27m25s 21 104 21m40s 21m40s 22 84 29m5s 29m5s 23 84 29m16s 29m16s -
Connections
Established Connections
Key values
- 108 connections Connection Peak
- 2025-08-15 06:03:15 Date
Connections per database
Key values
- ctdprd51 Main Database
- 426,265 connections Total
Connections per user
Key values
- pubeu Main User
- 426,265 connections Total
-
Sessions
Simultaneous sessions
Key values
- 145 sessions Session Peak
- 2025-08-14 02:51:30 Date
Histogram of session times
Key values
- 126,027 1000-30000ms duration
Sessions per database
Key values
- ctdprd51 Main Database
- 329,170 sessions Total
Sessions per user
Key values
- pubeu Main User
- 329,170 sessions Total
Sessions per host
Key values
- 10.12.5.53 Main Host
- 329,170 sessions Total
Host Count Total Duration Average Duration 10.12.5.45 2,650 55d14h6s 30m12s 10.12.5.46 2,616 55d17h3m26s 30m39s 10.12.5.53 318,523 67d15h20m21s 18s347ms 10.12.5.54 2,629 55d16h15m6s 30m29s 10.12.5.55 2,568 55d17h43m58s 31m15s 10.12.5.56 2 1m6s 33s222ms 192.168.201.10 3 16s907ms 5s635ms 192.168.201.14 2 1d5h7m22s 14h33m41s ::1 176 11d8h41s 1h32m43s [local] 1 5d14h26m27s 5d14h26m27s -
Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 125,926 buffers Checkpoint Peak
- 2025-08-12 03:43:16 Date
- 1619.855 seconds Highest write time
- 0.083 seconds Sync time
Checkpoints Wal files
Key values
- 40 files Wal files usage Peak
- 2025-08-11 07:13:10 Date
Checkpoints distance
Key values
- 1,269.98 Mo Distance Peak
- 2025-08-11 07:13:10 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time Aug 10 00 19,878 1,728.618s 0.005s 1,728.832s 01 3,085 309.354s 0.003s 309.441s 02 3,198 320.71s 0.003s 320.762s 03 3,515 352.329s 0.002s 352.416s 04 3,431 343.869s 0.003s 343.904s 05 5,509 552.617s 0.002s 552.753s 06 6,160 617.633s 0.003s 617.732s 07 5,797 580.903s 0.003s 580.986s 08 3,421 342.838s 0.002s 342.921s 09 5,512 552.26s 0.004s 552.357s 10 56,658 1,681.806s 0.003s 1,682.316s 11 4,249 425.711s 0.002s 425.795s 12 3,141 314.728s 0.002s 314.808s 13 3,009 301.618s 0.003s 301.703s 14 3,174 318.165s 0.002s 318.268s 15 4,413 442.254s 0.002s 442.358s 16 2,857 286.423s 0.003s 286.506s 17 3,008 301.364s 0.003s 301.447s 18 2,165 217.041s 0.003s 217.071s 19 3,527 353.239s 0.002s 353.32s 20 2,493 249.887s 0.003s 249.969s 21 1,567 156.986s 0.002s 157.053s 22 17,680 1,771.305s 0.003s 1,771.557s 23 2,548 255.573s 0.002s 255.605s Aug 11 00 9,206 922.939s 0.004s 923.08s 01 1,954 195.885s 0.002s 195.969s 02 856 85.845s 0.002s 85.874s 03 1,107 111.187s 0.002s 111.218s 04 498 49.919s 0.001s 49.935s 05 53,822 1,726.306s 0.005s 1,726.817s 06 630 63.162s 0.002s 63.181s 07 81,773 1,713.787s 0.006s 1,714.362s 08 1,613 161.758s 0.011s 161.831s 09 1,566 157.152s 0.003s 157.234s 10 1,188 119.151s 0.004s 119.182s 11 1,017 102.002s 0.002s 102.033s 12 1,714 171.868s 0.004s 171.952s 13 6,151 616.29s 0.004s 616.386s 14 1,556 156.023s 0.004s 156.283s 15 3,133 314.039s 0.004s 314.126s 16 3,111 311.764s 0.004s 311.845s 17 1,614 161.937s 0.004s 162.021s 18 1,282 128.59s 0.004s 128.624s 19 2,228 223.529s 0.028s 223.638s 20 1,686 169.052s 0.003s 169.136s 21 2,695 270.157s 0.004s 270.242s 22 1,810 181.415s 0.003s 181.446s 23 6,404 641.838s 0.004s 641.958s Aug 12 00 6,602 662.338s 0.006s 662.458s 01 1,733 173.848s 0.002s 173.936s 02 987 98.966s 0.002s 98.995s 03 126,332 1,659.843s 0.004s 1,660.327s 04 2,606 261.327s 0.003s 261.41s 05 6,618 663.061s 0.003s 663.187s 06 1,518 152.409s 0.002s 152.439s 07 2,236 224.401s 0.046s 224.577s 08 17,497 1,648.635s 0.002s 1,648.833s 09 1,867 187.375s 0.004s 187.459s 10 2,813 282.918s 0.002s 282.95s 11 5,876 589.386s 0.002s 589.491s 12 7,909 794.015s 0.004s 794.14s 13 1,967 197.37s 0.002s 197.452s 14 2,701 271.226s 0.003s 271.322s 15 2,455 246.444s 0.002s 246.476s 16 1,262 126.683s 0.001s 126.759s 17 64,937 1,773.876s 0.004s 1,774.547s 18 3,388 340.75s 0.002s 340.835s 19 2,523 253.253s 0.002s 253.295s 20 2,490 250.097s 0.002s 250.183s 21 2,389 239.643s 0.004s 239.747s 22 6,829 686.662s 0.004s 686.84s 23 4,811 483.764s 0.003s 483.847s Aug 13 00 5,551 557.4s 0.004s 557.539s 01 910 91.475s 0.003s 91.508s 02 2,764 277.971s 0.005s 278.097s 03 1,062 106.865s 0.035s 106.987s 04 8,474 852.666s 0.004s 852.823s 05 4,844 485.34s 0.003s 485.371s 06 1,546 155.976s 0.004s 156.088s 07 1,281 129.616s 0.004s 129.655s 08 1,670 168.158s 0.048s 168.957s 09 1,602 161.021s 0.003s 161.106s 10 8,521 856.311s 0.004s 856.446s 11 1,757 177.076s 0.005s 177.262s 12 7,872 793.451s 0.003s 793.581s 13 1,684 168.855s 0.004s 168.953s 14 2,645 266.62s 0.003s 266.709s 15 2,284 229.793s 0.003s 230.087s 16 3,639 365.839s 0.003s 365.892s 17 2,765 277.947s 0.003s 278.197s 18 2,114 213.282s 0.033s 213.351s 19 5,711 573.875s 0.004s 574.071s 20 3,479 350.493s 0.004s 350.577s 21 7,517 756.493s 0.017s 756.862s 22 6,626 667.206s 0.001s 667.433s 23 57,994 2,063.1s 0.015s 2,064.393s Aug 14 00 13,085 1,321.462s 0.005s 1,323.134s 01 5,644 567.842s 0.002s 567.921s 02 6,089 613.1s 0.004s 613.206s 03 4,194 421.742s 0.004s 421.821s 04 7,328 735.194s 0.003s 735.527s 05 4,557 459.13s 0.045s 459.309s 06 5,510 555.399s 0.004s 555.481s 07 4,327 435.311s 0.003s 435.387s 08 6,742 677.042s 0.025s 677.143s 09 4,934 496.708s 0.004s 496.834s 10 5,863 589.598s 0.003s 589.698s 11 2,845 287.665s 0.002s 287.694s 12 84,450 1,976.039s 0.023s 1,976.793s 13 5,786 582.5s 0.003s 582.632s 14 5,083 511.079s 0.059s 511.505s 15 4,388 440.734s 0.027s 441.606s 16 5,072 510.941s 0.009s 511.411s 17 4,183 420.429s 0.065s 420.674s 18 10,952 1,100.896s 0.084s 1,101.377s 19 3,894 392.788s 0.003s 392.966s 20 6,832 687.047s 0.059s 687.339s 21 4,708 473.764s 0.002s 473.929s 22 4,142 415.377s 0.003s 415.506s 23 3,722 373.819s 0.01s 373.908s Aug 15 00 11,344 1,137.015s 0.004s 1,137.317s 01 0 0s 0s 0s 02 0 0s 0s 0s 03 0 0s 0s 0s 04 0 0s 0s 0s 05 139 15.293s 0.028s 15.4s 06 912 97.028s 0.062s 97.823s 07 963 99.425s 0.003s 99.526s 08 445 45.685s 0.019s 45.722s 09 642 66.419s 0.044s 66.805s 10 375 37.679s 0.002s 37.708s 11 705 70.832s 0.003s 70.862s 12 1,245 124.839s 0.003s 124.884s 13 1,512 151.508s 0.003s 151.538s 14 1,507 150.834s 0.003s 150.878s 15 1,748 174.964s 0.003s 174.996s 16 414 41.689s 0.003s 41.72s 17 192 19.448s 0.002s 19.526s 18 14 1.57s 0.002s 1.599s 19 11 1.186s 0.001s 1.201s 20 20 2.169s 0.002s 2.2s 21 31 3.282s 0.002s 3.311s 22 29 3.104s 0.002s 3.134s 23 18 1.888s 0.001s 1.903s Aug 16 00 57,517 2,103.358s 0.004s 2,103.864s 01 421 42.338s 0.003s 42.369s 02 61 6.288s 0.002s 6.318s 03 32 3.39s 0.002s 3.42s 04 27 2.877s 0.002s 2.907s 05 583 58.564s 0.003s 58.594s 06 340 34.139s 0.003s 34.173s 07 177 17.91s 0.002s 17.942s 08 429 43.146s 0.002s 43.177s 09 120 12.199s 0.002s 12.23s 10 5,522 552.891s 0.002s 553.004s 11 109 11.097s 0.002s 11.126s 12 101 10.193s 0.002s 10.222s 13 43 4.495s 0.002s 4.525s 14 149 15.126s 0.002s 15.155s 15 183 18.514s 0.002s 18.545s 16 103 10.494s 0.002s 10.525s 17 2,404 240.832s 0.003s 240.91s 18 77 7.903s 0.002s 7.934s 19 114 11.593s 0.002s 11.624s 20 96 9.8s 0.002s 9.831s 21 140 14.212s 0.002s 14.242s 22 92 9.295s 0.002s 9.37s 23 124 12.593s 0.002s 12.623s Day Hour Added Removed Recycled Synced files Longest sync Average sync Aug 10 00 0 0 12 85 0.001s 0.002s 01 0 0 1 40 0.001s 0.002s 02 0 0 0 42 0.001s 0.002s 03 0 0 1 42 0.001s 0.002s 04 0 0 0 42 0.001s 0.002s 05 0 0 2 60 0.001s 0.002s 06 0 0 2 53 0.001s 0.002s 07 0 0 1 155 0.001s 0.002s 08 0 0 1 141 0.001s 0.002s 09 0 0 2 139 0.001s 0.002s 10 0 0 36 52 0.001s 0.002s 11 0 0 1 46 0.001s 0.002s 12 0 0 1 34 0.001s 0.002s 13 0 0 1 37 0.001s 0.002s 14 0 0 1 33 0.001s 0.002s 15 0 0 1 35 0.001s 0.002s 16 0 0 1 27 0.001s 0.002s 17 0 0 1 33 0.001s 0.002s 18 0 0 0 25 0.001s 0.002s 19 0 0 1 25 0.001s 0.002s 20 0 0 1 22 0.002s 0.002s 21 0 0 1 17 0.002s 0.001s 22 0 0 10 70 0.001s 0.003s 23 0 0 0 32 0.001s 0.002s Aug 11 00 0 0 6 81 0.001s 0.002s 01 0 0 1 36 0.001s 0.002s 02 0 0 0 35 0.001s 0.002s 03 0 0 0 38 0.001s 0.002s 04 0 0 0 18 0.001s 0.001s 05 0 0 36 107 0.001s 0.003s 06 0 0 0 66 0.001s 0.001s 07 0 0 41 156 0.001s 0.003s 08 0 0 0 85 0.006s 0.002s 09 0 0 1 77 0.001s 0.002s 10 0 0 0 29 0.001s 0.002s 11 0 0 0 78 0.001s 0.002s 12 0 0 1 78 0.001s 0.002s 13 0 0 3 100 0.001s 0.002s 14 0 0 1 116 0.001s 0.002s 15 0 0 1 118 0.001s 0.002s 16 0 0 1 128 0.001s 0.002s 17 0 0 1 111 0.001s 0.002s 18 0 0 0 23 0.001s 0.002s 19 0 0 1 30 0.015s 0.003s 20 0 0 1 20 0.001s 0.002s 21 0 0 1 39 0.001s 0.002s 22 0 0 0 29 0.001s 0.002s 23 0 0 4 39 0.001s 0.002s Aug 12 00 0 0 4 95 0.001s 0.002s 01 0 0 1 50 0.001s 0.002s 02 0 0 0 37 0.001s 0.002s 03 0 0 33 51 0.002s 0.002s 04 0 0 1 38 0.001s 0.002s 05 0 0 4 46 0.002s 0.002s 06 0 0 0 141 0.001s 0.002s 07 0 0 1 146 0.033s 0.002s 08 0 0 11 43 0.001s 0.002s 09 0 0 1 74 0.001s 0.002s 10 0 0 0 82 0.001s 0.002s 11 0 0 3 139 0.001s 0.002s 12 0 0 4 92 0.001s 0.002s 13 0 0 1 27 0.001s 0.002s 14 0 0 1 69 0.001s 0.002s 15 0 0 0 122 0.001s 0.002s 16 0 0 1 61 0.001s 0.001s 17 0 0 39 105 0.001s 0.003s 18 0 0 1 73 0.001s 0.002s 19 0 0 0 22 0.001s 0.002s 20 0 0 1 27 0.001s 0.002s 21 0 0 1 20 0.002s 0.002s 22 0 0 4 38 0.002s 0.002s 23 0 0 1 32 0.001s 0.002s Aug 13 00 0 0 5 72 0.001s 0.002s 01 0 0 0 37 0.001s 0.002s 02 0 0 1 47 0.003s 0.002s 03 0 0 1 35 0.022s 0.003s 04 0 0 7 46 0.001s 0.002s 05 0 0 0 84 0.001s 0.002s 06 0 0 1 156 0.001s 0.002s 07 0 0 0 125 0.001s 0.002s 08 0 0 1 136 0.036s 0.002s 09 0 0 1 121 0.001s 0.002s 10 0 0 5 169 0.001s 0.002s 11 0 0 1 123 0.002s 0.002s 12 0 0 4 99 0.001s 0.002s 13 0 0 1 32 0.001s 0.002s 14 0 0 1 130 0.001s 0.002s 15 0 0 1 122 0.001s 0.002s 16 0 0 1 36 0.001s 0.002s 17 0 0 1 63 0.001s 0.002s 18 0 0 0 26 0.022s 0.005s 19 0 0 4 33 0.002s 0.002s 20 0 0 1 37 0.001s 0.002s 21 0 0 3 39 0.010s 0.002s 22 0 29 6 24 0.001s 0.001s 23 0 0 7 71 0.010s 0.003s Aug 14 00 0 0 8 84 0.001s 0.002s 01 0 0 1 51 0.001s 0.002s 02 0 0 1 70 0.001s 0.002s 03 0 0 1 38 0.001s 0.002s 04 0 0 2 52 0.001s 0.002s 05 0 0 0 45 0.032s 0.004s 06 0 0 1 86 0.001s 0.002s 07 0 0 1 137 0.001s 0.002s 08 0 0 1 135 0.012s 0.002s 09 0 0 2 43 0.001s 0.002s 10 0 0 1 124 0.001s 0.002s 11 0 0 1 70 0.001s 0.001s 12 0 0 37 195 0.019s 0.003s 13 0 0 2 127 0.001s 0.002s 14 0 0 1 131 0.040s 0.002s 15 0 0 2 127 0.011s 0.002s 16 0 0 1 61 0.007s 0.002s 17 0 0 2 35 0.032s 0.004s 18 0 0 5 35 0.083s 0.01s 19 0 0 1 27 0.001s 0.002s 20 0 0 2 34 0.058s 0.004s 21 0 0 1 28 0.001s 0.002s 22 0 0 2 20 0.001s 0.002s 23 0 0 1 30 0.005s 0.002s Aug 15 00 0 0 8 77 0.001s 0.002s 01 0 0 0 0 0s 0s 02 0 0 0 0 0s 0s 03 0 0 0 0 0s 0s 04 0 0 0 0 0s 0s 05 0 0 0 12 0.028s 0.003s 06 0 0 1 85 0.043s 0.004s 07 0 0 0 139 0.001s 0.002s 08 0 0 0 58 0.011s 0.001s 09 0 0 0 26 0.043s 0.004s 10 0 0 0 21 0.001s 0.002s 11 0 0 0 72 0.001s 0.002s 12 0 0 1 119 0.001s 0.002s 13 0 0 0 142 0.001s 0.002s 14 0 0 1 122 0.001s 0.002s 15 0 0 0 128 0.001s 0.002s 16 0 0 0 58 0.001s 0.002s 17 0 0 1 99 0.001s 0.002s 18 0 0 0 12 0.001s 0.002s 19 0 0 0 7 0.001s 0.001s 20 0 0 0 13 0.001s 0.002s 21 0 0 0 13 0.001s 0.002s 22 0 0 0 13 0.001s 0.002s 23 0 0 0 7 0.001s 0.001s Aug 16 00 0 0 37 75 0.001s 0.002s 01 0 0 0 30 0.001s 0.002s 02 0 0 0 18 0.001s 0.002s 03 0 0 0 14 0.001s 0.002s 04 0 0 0 15 0.001s 0.002s 05 0 0 0 39 0.001s 0.002s 06 0 0 0 35 0.001s 0.002s 07 0 0 0 62 0.001s 0.002s 08 0 0 0 37 0.001s 0.002s 09 0 0 0 25 0.001s 0.002s 10 0 0 4 31 0.001s 0.002s 11 0 0 0 21 0.001s 0.002s 12 0 0 0 19 0.001s 0.002s 13 0 0 0 13 0.001s 0.002s 14 0 0 0 22 0.001s 0.002s 15 0 0 0 24 0.001s 0.002s 16 0 0 0 19 0.001s 0.002s 17 0 0 1 36 0.001s 0.002s 18 0 0 0 14 0.001s 0.002s 19 0 0 0 22 0.001s 0.002s 20 0 0 0 18 0.001s 0.002s 21 0 0 0 23 0.001s 0.002s 22 0 0 1 16 0.001s 0.002s 23 0 0 0 21 0.001s 0.002s Day Hour Count Avg time (sec) Aug 10 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 11 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 12 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 13 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 14 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 15 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 16 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Day Hour Mean distance Mean estimate Aug 10 00 99,937.00 kB 187,233.50 kB 01 3,444.50 kB 152,284.00 kB 02 3,990.00 kB 124,096.50 kB 03 4,777.00 kB 101,409.50 kB 04 4,692.00 kB 83,010.00 kB 05 11,415.00 kB 69,170.50 kB 06 17,114.00 kB 58,435.50 kB 07 13,342.00 kB 50,822.50 kB 08 6,336.50 kB 42,413.00 kB 09 13,210.00 kB 36,362.00 kB 10 301,614.00 kB 568,313.50 kB 11 6,955.00 kB 461,553.00 kB 12 7,063.00 kB 375,220.50 kB 13 6,731.00 kB 305,240.50 kB 14 7,017.50 kB 248,557.50 kB 15 9,679.50 kB 203,080.50 kB 16 7,014.50 kB 165,901.50 kB 17 7,404.00 kB 135,757.00 kB 18 5,490.00 kB 111,115.00 kB 19 6,819.50 kB 91,175.50 kB 20 7,010.50 kB 75,261.00 kB 21 7,984.00 kB 65,275.00 kB 22 53,867.33 kB 91,439.00 kB 23 6,233.00 kB 73,264.00 kB Aug 11 00 49,030.50 kB 91,315.50 kB 01 2,888.00 kB 74,467.00 kB 02 2,446.50 kB 60,807.50 kB 03 3,045.50 kB 49,813.00 kB 04 2,625.00 kB 42,876.00 kB 05 195,614.67 kB 523,981.33 kB 06 3,941.00 kB 423,595.00 kB 07 219,000.33 kB 587,724.33 kB 08 4,169.00 kB 451,417.50 kB 09 3,981.50 kB 366,483.50 kB 10 3,337.00 kB 297,499.50 kB 11 2,775.00 kB 241,519.50 kB 12 4,650.50 kB 196,423.50 kB 13 28,223.50 kB 162,526.00 kB 14 4,309.50 kB 134,444.50 kB 15 9,680.00 kB 110,651.00 kB 16 10,978.50 kB 91,547.00 kB 17 4,484.50 kB 75,267.00 kB 18 3,491.50 kB 61,634.50 kB 19 5,316.50 kB 50,833.50 kB 20 4,852.50 kB 42,148.50 kB 21 8,276.50 kB 35,733.00 kB 22 5,276.50 kB 29,873.00 kB 23 28,905.00 kB 50,608.50 kB Aug 12 00 33,190.00 kB 55,435.00 kB 01 5,680.50 kB 45,969.50 kB 02 3,010.50 kB 38,070.50 kB 03 267,963.50 kB 506,277.00 kB 04 8,848.00 kB 411,281.00 kB 05 32,876.50 kB 339,809.00 kB 06 4,529.00 kB 276,110.00 kB 07 6,619.00 kB 224,767.00 kB 08 89,870.50 kB 199,322.50 kB 09 5,094.00 kB 162,378.50 kB 10 5,327.00 kB 132,510.00 kB 11 21,514.50 kB 111,363.00 kB 12 33,527.50 kB 96,581.50 kB 13 5,138.00 kB 79,243.50 kB 14 6,569.50 kB 65,321.00 kB 15 6,977.00 kB 54,300.50 kB 16 6,843.00 kB 47,283.00 kB 17 212,584.67 kB 565,962.67 kB 18 7,490.00 kB 435,488.00 kB 19 6,820.00 kB 354,110.00 kB 20 7,696.00 kB 288,277.00 kB 21 6,772.00 kB 234,824.00 kB 22 28,440.00 kB 193,684.00 kB 23 12,847.50 kB 161,221.50 kB Aug 13 00 39,760.50 kB 138,353.00 kB 01 3,002.00 kB 112,601.50 kB 02 8,338.50 kB 92,292.50 kB 03 2,885.50 kB 75,803.50 kB 04 37,809.00 kB 68,758.50 kB 05 24,424.50 kB 66,507.00 kB 06 4,233.50 kB 54,559.50 kB 07 3,852.00 kB 44,960.50 kB 08 4,766.50 kB 37,258.00 kB 09 4,896.00 kB 31,169.50 kB 10 46,891.50 kB 84,364.00 kB 11 5,388.50 kB 69,338.50 kB 12 35,200.00 kB 62,009.00 kB 13 4,991.50 kB 55,433.50 kB 14 6,521.50 kB 46,041.50 kB 15 7,509.00 kB 38,708.00 kB 16 10,896.50 kB 33,528.00 kB 17 6,194.00 kB 28,242.00 kB 18 6,218.00 kB 24,132.50 kB 19 21,600.50 kB 29,177.00 kB 20 12,297.50 kB 33,595.00 kB 21 27,177.00 kB 38,519.50 kB 22 59,685.00 kB 59,685.00 kB 23 207,906.33 kB 531,194.00 kB Aug 14 00 64,665.00 kB 421,295.50 kB 01 11,461.00 kB 343,402.50 kB 02 10,595.50 kB 280,071.50 kB 03 4,695.50 kB 227,855.50 kB 04 13,891.50 kB 186,479.00 kB 05 7,090.00 kB 153,050.00 kB 06 7,395.50 kB 125,262.00 kB 07 6,998.00 kB 102,918.50 kB 08 10,977.00 kB 85,241.00 kB 09 10,343.00 kB 71,003.00 kB 10 10,787.00 kB 59,476.00 kB 11 11,685.00 kB 52,470.00 kB 12 203,019.67 kB 530,427.67 kB 13 12,596.50 kB 409,499.00 kB 14 15,164.00 kB 334,395.00 kB 15 13,686.50 kB 273,575.00 kB 16 11,510.50 kB 223,947.00 kB 17 11,012.00 kB 183,418.00 kB 18 39,218.50 kB 156,100.50 kB 19 10,261.50 kB 128,376.00 kB 20 15,202.50 kB 106,604.50 kB 21 13,995.00 kB 89,087.50 kB 22 12,763.50 kB 74,691.50 kB 23 10,831.50 kB 62,685.00 kB Aug 15 00 68,135.00 kB 128,326.00 kB 01 0.00 kB 0.00 kB 02 0.00 kB 0.00 kB 03 0.00 kB 0.00 kB 04 0.00 kB 0.00 kB 05 584.00 kB 109,533.00 kB 06 2,886.50 kB 94,053.50 kB 07 2,864.50 kB 76,777.50 kB 08 2,343.00 kB 65,798.00 kB 09 2,210.00 kB 2,718.50 kB 10 1,122.00 kB 2,446.50 kB 11 1,727.50 kB 2,269.50 kB 12 3,603.00 kB 4,295.00 kB 13 4,306.00 kB 4,319.00 kB 14 4,662.50 kB 4,977.00 kB 15 5,170.50 kB 5,502.00 kB 16 1,250.00 kB 4,909.50 kB 17 528.00 kB 4,047.00 kB 18 28.00 kB 3,313.00 kB 19 41.00 kB 2,830.00 kB 20 36.00 kB 2,425.50 kB 21 73.00 kB 1,975.50 kB 22 74.00 kB 1,615.50 kB 23 97.00 kB 1,390.00 kB Aug 16 00 304,789.00 kB 553,912.50 kB 01 1,204.00 kB 450,155.50 kB 02 163.50 kB 364,645.00 kB 03 29.50 kB 295,381.00 kB 04 42.00 kB 239,265.50 kB 05 1,651.00 kB 194,103.50 kB 06 996.50 kB 157,428.00 kB 07 411.50 kB 127,583.00 kB 08 1,162.50 kB 103,570.50 kB 09 341.50 kB 83,959.00 kB 10 29,342.50 kB 73,581.50 kB 11 342.50 kB 59,666.50 kB 12 299.00 kB 48,390.00 kB 13 140.50 kB 39,221.00 kB 14 327.50 kB 31,831.50 kB 15 501.00 kB 25,864.50 kB 16 201.00 kB 21,002.00 kB 17 8,820.50 kB 18,688.00 kB 18 168.50 kB 15,170.00 kB 19 327.50 kB 12,350.00 kB 20 196.50 kB 10,038.50 kB 21 364.00 kB 8,200.50 kB 22 228.50 kB 6,685.50 kB 23 370.00 kB 5,485.00 kB -
Temporary Files
Size of temporary files
Key values
- 19.66 MiB Temp Files size Peak
- 2025-08-10 00:09:15 Date
Number of temporary files
Key values
- 9 per second Temp Files Peak
- 2025-08-14 00:09:38 Date
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size Aug 10 00 9 19.66 MiB 2.18 MiB 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Aug 11 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Aug 12 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Aug 13 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Aug 14 00 9 11.43 MiB 1.27 MiB 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Aug 15 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Aug 16 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Queries generating the most temporary files (N)
Rank Count Total size Min size Max size Avg size Query 1 18 31.09 MiB 384.00 KiB 3.68 MiB 1.73 MiB vacuum full analyze log_query;-
VACUUM FULL ANALYZE log_query;
Date: 2025-08-14 00:09:38 Duration: 0ms
Queries generating the largest temporary files
Rank Size Query 1 3.68 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-08-10 00:09:15 ]
2 3.28 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-08-10 00:09:15 ]
3 3.20 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-08-10 00:09:15 ]
4 2.66 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-08-10 00:09:15 ]
5 2.34 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-08-14 00:09:38 ]
6 2.06 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-08-14 00:09:38 ]
7 1.85 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-08-14 00:09:38 ]
8 1.81 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-08-10 00:09:15 ]
9 1.73 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-08-14 00:09:38 ]
10 1.70 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-08-10 00:09:15 ]
11 1.44 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-08-10 00:09:15 ]
12 1.02 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-08-14 00:09:38 ]
13 1016.00 KiB VACUUM FULL ANALYZE log_query;[ Date: 2025-08-14 00:09:38 ]
14 992.00 KiB VACUUM FULL ANALYZE log_query;[ Date: 2025-08-10 00:09:15 ]
15 936.00 KiB VACUUM FULL ANALYZE log_query;[ Date: 2025-08-10 00:09:15 ]
16 616.00 KiB VACUUM FULL ANALYZE log_query;[ Date: 2025-08-14 00:09:38 ]
17 472.00 KiB VACUUM FULL ANALYZE log_query;[ Date: 2025-08-14 00:09:38 ]
18 384.00 KiB VACUUM FULL ANALYZE log_query;[ Date: 2025-08-14 00:09:38 ]
-
Vacuums
Vacuums / Analyzes Distribution
Key values
- 18.31 sec Highest CPU-cost vacuum
Table pub1.term_set_enrichment_agent
Database ctdprd51 - 2025-08-12 02:50:43 Date
- 0 sec Highest CPU-cost analyze
Table
Database ctdprd51 - Date
Average Autovacuum Duration
Key values
- 18.31 sec Highest CPU-cost vacuum
Table pub1.term_set_enrichment_agent
Database ctdprd51 - 2025-08-12 02:50:43 Date
Analyzes per table
Key values
- pubc.log_query (196) Main table analyzed (database ctdprd51)
- 214 analyzes Total
Table Number of analyzes ctdprd51.pubc.log_query 196 ctdprd51.pub1.term_set_enrichment 4 ctdprd51.pub1.term_set_enrichment_agent 4 ctdprd51.pub1.term_comp_agent 2 ctdprd51.pub1.term_comp 2 ctdprd51.edit.exp_event 1 ctdprd51.edit.exp_stressor 1 ctdprd51.pubc.log_query_bots 1 ctdprd51.pg_catalog.pg_attribute 1 ctdprd51.pg_catalog.pg_class 1 ctdprd51.edit.exp_outcome 1 Total 214 Vacuums per table
Key values
- pubc.log_query (74) Main table vacuumed on database ctdprd51
- 87 vacuums Total
Index Buffer usage Skipped WAL usage Table Vacuums scans hits misses dirtied pins frozen records full page bytes ctdprd51.pubc.log_query 74 54 281,930 0 52,423 0 66,957 99,321 8,791 65,902,513 ctdprd51.pg_toast.pg_toast_2619 4 4 15,182 0 5,142 0 39,827 12,590 4,033 2,160,764 ctdprd51.pub1.term_set_enrichment 2 0 7,924 0 3,528 0 0 3,855 4 247,251 ctdprd51.edit.exp_outcome 1 1 2,145 0 149 0 0 1,309 141 912,730 ctdprd51.pub1.term_set_enrichment_agent 1 0 191,125 0 76,180 0 0 95,466 4 5,665,504 ctdprd51.pg_catalog.pg_class 1 1 350 0 71 0 0 158 69 335,986 ctdprd51.edit.exp_event 1 1 7,420 0 788 0 0 4,709 784 2,867,697 ctdprd51.pg_catalog.pg_statistic 1 1 803 0 187 0 124 530 179 669,268 ctdprd51.edit.exp_event_location 1 1 4,558 0 1,309 0 0 3,474 1,257 6,260,527 ctdprd51.pub1.term_comp_agent 1 0 161 0 28 0 0 36 2 16,935 Total 87 63 511,598 12,064 139,805 0 106,908 221,448 15,264 85,039,175 Tuples removed per table
Key values
- pubc.log_query (271030) Main table with removed tuples on database ctdprd51
- 362109 tuples Total removed
Index Tuples Pages Table Vacuums scans removed remain not yet removable removed remain ctdprd51.pubc.log_query 74 54 271,030 2,878,856 366,798 0 182,664 ctdprd51.edit.exp_event 1 1 26,708 198,093 0 0 7,164 ctdprd51.edit.exp_outcome 1 1 26,417 36,295 0 0 509 ctdprd51.edit.exp_event_location 1 1 21,751 249,112 0 0 2,223 ctdprd51.pg_toast.pg_toast_2619 4 4 15,556 75,746 0 0 50,368 ctdprd51.pg_catalog.pg_statistic 1 1 571 3,389 0 0 410 ctdprd51.pg_catalog.pg_class 1 1 76 1,799 0 0 94 ctdprd51.pub1.term_set_enrichment_agent 1 0 0 42,559,329 0 0 483,630 ctdprd51.pub1.term_set_enrichment 2 0 0 1,143,675 0 0 18,928 ctdprd51.pub1.term_comp_agent 1 0 0 12,500 0 0 110 Total 87 63 362,109 47,158,794 366,798 0 746,100 Pages removed per table
Key values
- unknown (0) Main table with removed pages on database unknown
- 0 pages Total removed
Pages removed per tables
NO DATASET
Table Number of vacuums Index scans Tuples removed Pages removed ctdprd51.edit.exp_outcome 1 1 26417 0 ctdprd51.pub1.term_set_enrichment_agent 1 0 0 0 ctdprd51.pg_catalog.pg_class 1 1 76 0 ctdprd51.edit.exp_event 1 1 26708 0 ctdprd51.pg_catalog.pg_statistic 1 1 571 0 ctdprd51.pub1.term_set_enrichment 2 0 0 0 ctdprd51.edit.exp_event_location 1 1 21751 0 ctdprd51.pg_toast.pg_toast_2619 4 4 15556 0 ctdprd51.pub1.term_comp_agent 1 0 0 0 ctdprd51.pubc.log_query 74 54 271030 0 Total 87 63 362,109 0 Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs Aug 10 00 3 7 01 2 4 02 1 4 03 1 2 04 1 1 05 1 1 06 0 2 07 1 1 08 0 1 09 1 1 10 0 3 11 1 0 12 0 1 13 0 1 14 1 0 15 0 1 16 0 0 17 0 1 18 0 0 19 1 0 20 0 0 21 0 1 22 0 0 23 0 0 Aug 11 00 3 5 01 2 5 02 1 3 03 1 2 04 1 2 05 0 2 06 1 3 07 0 1 08 1 1 09 0 1 10 0 1 11 0 0 12 1 1 13 0 1 14 0 1 15 1 1 16 0 1 17 0 0 18 0 0 19 1 1 20 0 0 21 0 1 22 0 0 23 0 1 Aug 12 00 2 7 01 1 4 02 4 4 03 1 2 04 0 2 05 1 2 06 0 1 07 2 3 08 0 1 09 1 1 10 1 1 11 1 1 12 0 2 13 0 1 14 1 1 15 0 0 16 0 2 17 0 0 18 1 1 19 0 0 20 0 1 21 0 0 22 0 1 23 1 0 Aug 13 00 2 5 01 1 4 02 1 3 03 1 2 04 1 2 05 1 0 06 0 1 07 1 2 08 0 1 09 0 2 10 4 3 11 0 3 12 1 1 13 0 1 14 1 1 15 0 1 16 0 1 17 1 1 18 0 0 19 0 1 20 0 0 21 1 1 22 0 1 23 0 1 Aug 14 00 5 4 01 1 4 02 1 2 03 1 2 04 1 1 05 0 2 06 1 1 07 0 2 08 1 1 09 0 1 10 1 1 11 0 2 12 0 0 13 1 1 14 0 1 15 0 1 16 1 0 17 1 1 18 0 1 19 1 0 20 0 1 21 0 0 22 0 1 23 0 0 Aug 15 00 1 2 01 0 0 02 0 0 03 0 0 04 0 0 05 1 1 06 1 4 07 0 2 08 1 3 09 0 0 10 0 1 11 1 0 12 0 2 13 2 2 14 1 2 15 0 1 16 0 0 17 0 0 18 0 0 19 0 0 20 0 0 21 0 0 22 0 0 23 0 0 Aug 16 00 1 3 01 0 0 02 0 1 03 0 0 04 0 1 05 0 4 06 0 1 07 0 1 08 1 1 09 0 1 10 0 1 11 0 1 12 0 1 13 0 0 14 0 1 15 1 1 16 0 0 17 0 1 18 0 0 19 0 1 20 0 0 21 0 1 22 0 0 23 0 1 - 18.31 sec Highest CPU-cost vacuum
-
Locks
Locks by types
Key values
- unknown Main Lock Type
- 0 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query NO DATASET
Queries that waited the most
Rank Wait time Query NO DATASET
-
Queries
Queries by type
Key values
- 17,456 Total read queries
- 429 Total write queries
Queries by database
Key values
- unknown Main database
- 11,781 Requests
- 3d18h (unknown)
- Main time consuming database
Queries by user
Key values
- unknown Main user
- 42,020 Requests
User Request type Count Duration edit Total 5 1m36s select 5 1m36s load Total 4 59s120ms select 4 59s120ms postgres Total 4 3m51s select 4 3m51s pubeu Total 14,650 4d15h51m43s cte 104 13m6s select 14,546 4d15h38m37s qaeu Total 40 4m13s cte 1 3s676ms select 39 4m9s unknown Total 42,020 10d20h36m52s cte 1,251 4h17m17s others 12 1m46s select 40,757 10d16h17m48s zbx_monitor Total 1 1s889ms select 1 1s889ms Duration by user
Key values
- 10d20h36m52s (unknown) Main time consuming user
User Request type Count Duration edit Total 5 1m36s select 5 1m36s load Total 4 59s120ms select 4 59s120ms postgres Total 4 3m51s select 4 3m51s pubeu Total 14,650 4d15h51m43s cte 104 13m6s select 14,546 4d15h38m37s qaeu Total 40 4m13s cte 1 3s676ms select 39 4m9s unknown Total 42,020 10d20h36m52s cte 1,251 4h17m17s others 12 1m46s select 40,757 10d16h17m48s zbx_monitor Total 1 1s889ms select 1 1s889ms Queries by host
Key values
- unknown Main host
- 56,724 Requests
- 15d12h39m18s (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 17,891 Requests
- 5d20h22m26s (unknown)
- Main time consuming application
Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2025-08-13 12:25:40 Date
Number of cancelled queries (5 minutes period)
NO DATASET
-
Top Queries
Histogram of query times
Key values
- 8,991 1000-10000ms duration
Slowest individual queries
Rank Duration Query 1 53m2s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-08-15 07:04:28 - Bind query: yes ]
2 51m26s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-08-15 07:23:04 - Bind query: yes ]
3 51m21s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-08-15 07:18:25 - Bind query: yes ]
4 51m18s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-08-15 07:22:46 - Bind query: yes ]
5 51m14s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-08-15 07:21:03 - Bind query: yes ]
6 50m59s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-08-15 07:24:47 - Bind query: yes ]
7 50m26s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-08-15 07:13:19 - Bind query: yes ]
8 49m33s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-08-15 07:04:27 - Bind query: yes ]
9 48m41s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-08-15 07:03:24 - Bind query: yes ]
10 47m36s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-08-15 06:58:36 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
11 47m15s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-08-15 07:31:02 - Bind query: yes ]
12 46m43s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-08-15 06:47:08 - Bind query: yes ]
13 46m38s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-08-15 06:54:13 - Bind query: yes ]
14 46m9s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-08-15 06:52:28 - Bind query: yes ]
15 45m3s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-08-15 06:48:01 - Bind query: yes ]
16 44m46s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-08-15 06:44:46 - Bind query: yes ]
17 44m8s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-08-15 06:43:19 - Bind query: yes ]
18 43m52s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-08-15 06:39:04 - Bind query: yes ]
19 43m18s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-08-15 07:32:48 - Bind query: yes ]
20 42m54s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-08-15 06:34:41 - Bind query: yes ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 3d1h4m42s 478 5s2ms 53m2s 9m10s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Aug 10 00 2 9m23s 4m41s 01 6 17m20s 2m53s 02 5 37m22s 7m28s 03 2 14m51s 7m25s 04 6 23m35s 3m55s 05 2 8m15s 4m7s 06 1 3m5s 3m5s 07 4 23m33s 5m53s 08 1 3m35s 3m35s 09 6 24m29s 4m4s 10 3 13m7s 4m22s 11 5 26m21s 5m16s 12 4 22m52s 5m43s 13 1 5m18s 5m18s 14 1 5m6s 5m6s 15 2 7m7s 3m33s 16 2 5m13s 2m36s 17 1 4m17s 4m17s Aug 11 00 1 3m40s 3m40s 03 2 9m19s 4m39s 06 3 9m28s 3m9s 07 2 15m9s 7m34s 12 1 4m12s 4m12s 13 1 3m31s 3m31s 15 3 31m33s 10m31s 18 1 5m29s 5m29s 21 1 10m3s 10m3s 22 5 25m47s 5m9s Aug 12 02 1 3m27s 3m27s 07 1 3m56s 3m56s 10 1 6m8s 6m8s 11 1 5m8s 5m8s 12 3 13m13s 4m24s 13 2 9m24s 4m42s 14 1 3m19s 3m19s 15 5 13m20s 2m40s 16 4 23m20s 5m50s 17 3 11m26s 3m48s 18 8 40m27s 5m3s 19 1 6m31s 6m31s 20 5 31m23s 6m16s 21 3 12m44s 4m14s 22 6 47m7s 7m51s 23 1 3m39s 3m39s Aug 13 00 4 12m34s 3m8s 02 5 16m20s 3m16s 03 6 24m16s 4m2s 04 4 31m30s 7m52s 06 3 14m30s 4m50s 07 8 28m50s 3m36s 08 4 20m28s 5m7s 09 7 31m44s 4m32s 10 2 7m39s 3m49s 11 2 3m37s 1m48s 12 2 10m45s 5m22s 13 3 8m41s 2m53s 14 6 23m49s 3m58s 15 2 6m13s 3m6s 16 6 21m15s 3m32s 17 4 26m15s 6m33s 18 4 18m17s 4m34s 19 10 52m29s 5m14s 20 4 14m31s 3m37s 21 3 20m9s 6m43s 22 3 20m34s 6m51s 23 12 1h38m4s 8m10s Aug 14 00 61 5h46m32s 5m40s 01 4 12m58s 3m14s 02 8 28m54s 3m36s 04 2 7m15s 3m37s 05 1 3m49s 3m49s 06 1 5m20s 5m20s 07 2 8m57s 4m28s 09 3 25m21s 8m27s 10 2 7m22s 3m41s 11 2 14m26s 7m13s 13 1 3m40s 3m40s 15 8 5m43s 42s975ms 16 28 3h54m59s 8m23s Aug 15 05 7 3m40s 31s528ms 06 32 9h8m6s 17m7s 07 24 14h38m48s 36m37s 08 14 27m57s 1m59s 09 26 11h34m36s 26m42s 10 8 1h58m46s 14m50s 11 7 2h3m5s 17m35s 12 8 1h30m33s 11m19s 13 2 27m19s 13m39s 14 3 45m49s 15m16s [ User: pubeu - Total duration: 1d8h57m21s - Times executed: 306 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-08-15 07:04:28 Duration: 53m2s Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-08-15 07:23:04 Duration: 51m26s Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-08-15 07:18:25 Duration: 51m21s Bind query: yes
2 11h32m19s 3,921 5s3ms 16s558ms 10s594ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where exposuremarkerterm.id = ? or receptorterm.id = ? group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Aug 10 09 2 11s218ms 5s609ms Aug 13 10 1 5s124ms 5s124ms 11 1 5s375ms 5s375ms 12 2 10s519ms 5s259ms 17 1 5s143ms 5s143ms 23 58 7m36s 7s864ms Aug 14 00 124 17m33s 8s497ms 01 3 17s158ms 5s719ms 05 3 18s788ms 6s262ms 06 1 5s404ms 5s404ms 09 1 6s412ms 6s412ms 16 115 13m4s 6s821ms 22 1 5s612ms 5s612ms Aug 15 00 5 41s629ms 8s325ms 05 725 1h53m52s 9s424ms 06 1,670 5h23m4s 11s607ms 07 548 2h8s 13s154ms 08 660 1h34m46s 8s616ms [ User: pubeu - Total duration: 46m7s - Times executed: 363 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '2098302' or receptorTerm.id = '2098302' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-08-15 06:44:28 Duration: 16s558ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1603623' or receptorTerm.id = '1603623' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-08-15 07:04:10 Duration: 16s523ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1972847' or receptorTerm.id = '1972847' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-08-15 06:44:59 Duration: 16s490ms Bind query: yes
3 8h23m23s 685 5s12ms 3m36s 44s92ms select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ?;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Aug 10 00 3 31s357ms 10s452ms 01 9 2m41s 17s977ms 02 4 1m23s 20s907ms 03 1 25s245ms 25s245ms 04 8 2m16s 17s49ms 05 2 32s837ms 16s418ms 06 8 2m16s 17s54ms 07 4 1m32s 23s67ms 08 3 1m14s 24s932ms 09 5 1m16s 15s365ms 10 5 59s70ms 11s814ms 11 2 32s119ms 16s59ms 12 4 1m8s 17s70ms 13 2 43s952ms 21s976ms 14 2 31s831ms 15s915ms 16 1 12s466ms 12s466ms 18 2 32s945ms 16s472ms Aug 11 00 1 23s482ms 23s482ms 06 1 25s557ms 25s557ms 07 2 37s219ms 18s609ms 09 1 25s799ms 25s799ms 10 1 18s623ms 18s623ms 11 1 18s564ms 18s564ms 14 1 24s517ms 24s517ms 15 1 24s286ms 24s286ms 20 1 24s557ms 24s557ms Aug 12 00 3 27s215ms 9s71ms 07 1 13s44ms 13s44ms 08 1 5s332ms 5s332ms 09 2 15s105ms 7s552ms 12 5 1m24s 16s871ms 13 2 45s224ms 22s612ms 14 4 1m19s 19s965ms 15 3 1m6s 22s143ms 16 2 47s780ms 23s890ms 17 2 18s983ms 9s491ms 18 9 3m18s 22s62ms 19 6 1m57s 19s662ms 20 2 47s317ms 23s658ms 21 10 2m54s 17s462ms 22 4 39s611ms 9s902ms 23 7 2m10s 18s670ms Aug 13 00 2 40s214ms 20s107ms 01 3 1m1s 20s630ms 02 4 41s307ms 10s326ms 03 2 19s796ms 9s898ms 04 4 1m3s 15s986ms 05 1 11s836ms 11s836ms 06 3 40s925ms 13s641ms 07 4 1m5s 16s418ms 08 6 2m18s 23s152ms 09 3 35s513ms 11s837ms 10 3 49s269ms 16s423ms 11 6 1m43s 17s220ms 12 4 1m26s 21s502ms 13 4 55s41ms 13s760ms 14 1 16s427ms 16s427ms 15 3 30s830ms 10s276ms 16 2 30s534ms 15s267ms 17 5 1m48s 21s799ms 18 4 1m3s 15s977ms 19 7 2m6s 18s18ms 20 4 1m 15s15ms 21 8 1m56s 14s539ms 22 3 46s229ms 15s409ms 23 20 9m52s 29s634ms Aug 14 00 92 53m7s 34s646ms 01 1 16s844ms 16s844ms 02 2 47s3ms 23s501ms 03 2 49s219ms 24s609ms 04 2 40s918ms 20s459ms 05 7 2m14s 19s201ms 06 2 47s978ms 23s989ms 07 1 27s602ms 27s602ms 08 4 1m33s 23s334ms 09 8 2m 15s37ms 10 1 25s362ms 25s362ms 11 7 1m52s 16s113ms 13 1 7s314ms 7s314ms 15 12 3m29s 17s475ms 16 23 22m56s 59s849ms 18 1 9s259ms 9s259ms 23 1 8s459ms 8s459ms Aug 15 05 38 58m33s 1m32s 06 85 2h24m40s 1m42s 07 30 54m14s 1m48s 08 75 1h8m13s 54s573ms 09 5 1m7s 13s492ms 10 14 3m19s 14s259ms 11 7 1m50s 15s735ms 12 11 2m45s 15s30ms 13 7 1m37s 13s983ms 14 1 23s6ms 23s6ms 15 1 11s446ms 11s446ms [ User: pubeu - Total duration: 2h21m31s - Times executed: 371 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1239590') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-08-15 07:06:21 Duration: 3m36s Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1239590') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-08-15 06:47:05 Duration: 3m30s Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1239590') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-08-15 06:48:55 Duration: 3m27s Bind query: yes
4 7h46m5s 1,275 5s 2m3s 21s933ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Aug 10 00 1 7s362ms 7s362ms 01 3 25s83ms 8s361ms 02 1 5s367ms 5s367ms 03 5 28s950ms 5s790ms 04 1 6s606ms 6s606ms 05 2 14s506ms 7s253ms 06 4 34s832ms 8s708ms 07 2 13s265ms 6s632ms 08 3 16s237ms 5s412ms 09 1 10s238ms 10s238ms 10 1 11s414ms 11s414ms 11 3 23s18ms 7s672ms 12 1 5s414ms 5s414ms 13 1 5s788ms 5s788ms 14 1 6s597ms 6s597ms 19 1 5s456ms 5s456ms Aug 11 01 1 5s858ms 5s858ms 07 2 11s147ms 5s573ms 08 1 5s321ms 5s321ms 13 2 16s313ms 8s156ms 15 1 5s58ms 5s58ms 19 1 5s85ms 5s85ms Aug 12 00 2 12s912ms 6s456ms 02 1 5s860ms 5s860ms 06 2 11s683ms 5s841ms 07 2 12s133ms 6s66ms 09 4 24s311ms 6s77ms 10 2 16s391ms 8s195ms 11 1 6s86ms 6s86ms 12 3 22s100ms 7s366ms 13 5 36s522ms 7s304ms 14 4 26s479ms 6s619ms 15 3 19s834ms 6s611ms 16 2 16s536ms 8s268ms 17 1 6s85ms 6s85ms 18 3 18s686ms 6s228ms 19 2 11s754ms 5s877ms 20 3 16s27ms 5s342ms 21 3 25s113ms 8s371ms 22 6 36s969ms 6s161ms 23 7 59s 8s428ms Aug 13 00 2 12s442ms 6s221ms 01 2 11s390ms 5s695ms 02 3 17s15ms 5s671ms 03 3 24s354ms 8s118ms 04 3 23s558ms 7s852ms 05 2 11s268ms 5s634ms 06 6 44s972ms 7s495ms 07 4 28s189ms 7s47ms 09 2 14s765ms 7s382ms 10 4 29s70ms 7s267ms 11 2 12s180ms 6s90ms 12 3 20s758ms 6s919ms 13 8 1m8s 8s615ms 14 2 13s661ms 6s830ms 15 6 42s590ms 7s98ms 16 3 23s691ms 7s897ms 17 4 36s24ms 9s6ms 18 3 22s767ms 7s589ms 19 2 18s427ms 9s213ms 20 1 12s233ms 12s233ms 21 3 24s173ms 8s57ms 22 5 37s682ms 7s536ms 23 52 15m3s 17s376ms Aug 14 00 6 1m1s 10s288ms 01 4 38s767ms 9s691ms 02 2 10s401ms 5s200ms 03 4 37s84ms 9s271ms 04 4 25s865ms 6s466ms 05 2 11s607ms 5s803ms 06 1 5s76ms 5s76ms 07 2 12s242ms 6s121ms 08 2 11s956ms 5s978ms 09 7 55s404ms 7s914ms 10 4 36s134ms 9s33ms 11 1 5s472ms 5s472ms 12 1 5s488ms 5s488ms 15 1 7s645ms 7s645ms 16 1 14s775ms 14s775ms 22 2 12s113ms 6s56ms Aug 15 00 1 10s799ms 10s799ms 05 170 1h20m21s 28s362ms 06 336 2h53m45s 31s28ms 07 135 1h28m1s 39s122ms 08 285 1h12m29s 15s262ms 09 18 2m34s 8s570ms 10 12 1m35s 7s980ms 11 22 2m30s 6s850ms 12 20 2m9s 6s472ms 13 8 53s805ms 6s725ms 14 4 33s135ms 8s283ms [ User: pubeu - Total duration: 1h11m12s - Times executed: 430 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-08-15 07:05:38 Duration: 2m3s Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-08-15 06:47:30 Duration: 2m3s Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-08-15 07:05:13 Duration: 2m2s Bind query: yes
5 6h30m57s 1,800 5s2ms 1m24s 13s31ms select * from ( select g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, count(*) over () fullrowcount from term g where g.id in ( select gt.gene_id from dag_path dp inner join gene_taxon gt on dp.descendant_object_id = gt.taxon_id where dp.ancestor_object_id = ? union all select gcr.gene_id from dag_path dp inner join gene_chem_reference gcr on dp.descendant_object_id = gcr.taxon_id where dp.ancestor_object_id = ?) offset ?) mq order by mq.genesymbolsort limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Aug 10 00 5 32s545ms 6s509ms 01 2 13s512ms 6s756ms 04 3 19s238ms 6s412ms 05 2 12s714ms 6s357ms 06 1 6s443ms 6s443ms 07 1 6s498ms 6s498ms 09 1 9s196ms 9s196ms 10 1 6s691ms 6s691ms 16 1 6s466ms 6s466ms Aug 12 08 1 5s986ms 5s986ms 09 2 13s94ms 6s547ms 11 1 6s172ms 6s172ms 14 2 12s652ms 6s326ms 18 3 17s127ms 5s709ms 20 2 12s949ms 6s474ms 21 1 6s312ms 6s312ms 23 3 19s188ms 6s396ms Aug 13 02 1 7s864ms 7s864ms 04 1 6s476ms 6s476ms 06 2 13s161ms 6s580ms 07 3 19s735ms 6s578ms 09 1 6s529ms 6s529ms 10 1 6s356ms 6s356ms 11 3 17s913ms 5s971ms 12 1 6s269ms 6s269ms 13 1 6s743ms 6s743ms 14 1 6s331ms 6s331ms 15 5 35s684ms 7s136ms 17 4 22s624ms 5s656ms 19 1 5s334ms 5s334ms 21 1 7s213ms 7s213ms 22 2 14s220ms 7s110ms 23 39 5m22s 8s264ms Aug 14 00 72 11m7s 9s270ms 01 2 14s888ms 7s444ms 02 3 19s771ms 6s590ms 04 1 8s906ms 8s906ms 05 7 46s255ms 6s607ms 08 1 7s165ms 7s165ms 09 2 12s158ms 6s79ms 11 3 18s388ms 6s129ms 15 1 6s673ms 6s673ms 16 36 4m13s 7s29ms 22 2 10s802ms 5s401ms 23 1 6s130ms 6s130ms Aug 15 00 6 49s512ms 8s252ms 05 283 1h5m2s 13s789ms 06 681 2h46m10s 14s640ms 07 215 1h6m28s 18s551ms 08 356 59m43s 10s66ms 09 5 31s52ms 6s210ms 10 7 42s958ms 6s136ms 11 10 1m2s 6s228ms 12 5 31s124ms 6s224ms 13 2 12s189ms 6s94ms [ User: pubeu - Total duration: 39m31s - Times executed: 308 ]
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '663702' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '663702') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-08-15 07:03:13 Duration: 1m24s Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '663702' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '663702') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-08-15 06:53:34 Duration: 1m20s Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '663702' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '663702') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-08-15 06:50:13 Duration: 1m16s Bind query: yes
6 4h9m11s 949 5s1ms 5m51s 15s754ms select r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refacc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, count(*) over () fullrowcount from reference r where r.id in ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) order by r.sort_txt limit ?;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Aug 10 05 1 5s761ms 5s761ms 08 2 14s53ms 7s26ms 09 7 1m 8s689ms 10 4 1m28s 22s216ms 11 1 5s495ms 5s495ms 15 1 1m9s 1m9s Aug 11 07 1 34s987ms 34s987ms 08 3 3m33s 1m11s 17 1 1m10s 1m10s 23 1 56s966ms 56s966ms Aug 12 12 1 50s340ms 50s340ms 15 1 31s223ms 31s223ms 18 1 6s857ms 6s857ms 20 1 41s549ms 41s549ms Aug 13 01 1 1m19s 1m19s 03 1 48s531ms 48s531ms 04 1 6s102ms 6s102ms 07 2 10s910ms 5s455ms 08 2 10s667ms 5s333ms 09 3 1m13s 24s474ms 10 6 1m50s 18s356ms 11 9 51s841ms 5s760ms 12 5 3m25s 41s116ms 13 7 38s689ms 5s527ms 14 3 53s818ms 17s939ms 15 1 5s78ms 5s78ms 16 3 15s825ms 5s275ms 17 15 3m11s 12s788ms 18 5 30s558ms 6s111ms 19 2 10s316ms 5s158ms 21 11 58s971ms 5s361ms 22 3 16s67ms 5s355ms 23 98 37m37s 23s34ms Aug 14 00 84 19m56s 14s249ms 01 9 51s631ms 5s736ms 02 4 52s937ms 13s234ms 03 4 23s712ms 5s928ms 04 4 1m10s 17s600ms 05 13 1m16s 5s871ms 06 12 1m4s 5s359ms 08 1 5s897ms 5s897ms 09 5 29s304ms 5s860ms 11 8 2m54s 21s837ms 16 44 6m9s 8s402ms 19 1 5s11ms 5s11ms 22 6 32s924ms 5s487ms 23 4 22s779ms 5s694ms Aug 15 00 7 1m9s 9s983ms 05 104 27m17s 15s742ms 06 234 1h9m9s 17s731ms 07 76 24m4s 19s10ms 08 122 23m49s 11s720ms 09 3 18s75ms 6s25ms [ User: pubeu - Total duration: 1h31m19s - Times executed: 354 ]
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2101536')) ORDER BY r.sort_txt LIMIT 50;
Date: 2025-08-13 23:33:27 Duration: 5m51s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2105591')) ORDER BY r.sort_txt LIMIT 50;
Date: 2025-08-13 23:33:18 Duration: 5m49s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2105591')) ORDER BY r.sort_txt LIMIT 50;
Date: 2025-08-13 23:33:21 Duration: 5m41s Database: ctdprd51 User: pubeu Bind query: yes
7 4h1m23s 1,435 5s1ms 19s628ms 10s92ms select count(*) from gene_disease gd where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?);Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Aug 10 08 1 7s113ms 7s113ms Aug 13 11 1 5s90ms 5s90ms 13 1 5s39ms 5s39ms 17 2 10s221ms 5s110ms 18 1 5s157ms 5s157ms 23 152 18m6s 7s149ms Aug 14 00 71 9m48s 8s283ms 05 5 27s421ms 5s484ms 09 1 5s699ms 5s699ms 16 100 10m36s 6s361ms Aug 15 00 5 41s639ms 8s327ms 05 181 30m52s 10s235ms 06 475 1h32m25s 11s675ms 07 203 44m23s 13s122ms 08 236 33m22s 8s484ms [ User: pubeu - Total duration: 24m56s - Times executed: 214 ]
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SELECT /* DiseaseGeneAssnsDAO.rowCount */ COUNT(*) FROM gene_disease gd WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341');
Date: 2025-08-15 06:47:59 Duration: 19s628ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO.rowCount */ COUNT(*) FROM gene_disease gd WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341');
Date: 2025-08-15 07:02:56 Duration: 19s565ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO.rowCount */ COUNT(*) FROM gene_disease gd WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341');
Date: 2025-08-15 07:05:57 Duration: 19s438ms Bind query: yes
8 3h32m39s 1,471 5s12ms 47s60ms 8s674ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where associatedterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Aug 10 00 11 1m15s 6s907ms 01 26 2m59s 6s900ms 02 13 1m29s 6s878ms 03 15 1m42s 6s802ms 04 13 1m28s 6s771ms 05 11 1m14s 6s787ms 06 5 34s646ms 6s929ms 07 21 2m26s 6s963ms 08 20 2m26s 7s325ms 09 34 4m35s 8s106ms 10 10 1m16s 7s641ms 11 12 1m21s 6s785ms 12 7 47s697ms 6s813ms 13 12 1m21s 6s800ms 14 5 33s950ms 6s790ms 15 6 40s762ms 6s793ms 16 8 54s601ms 6s825ms 17 6 40s120ms 6s686ms 18 5 33s567ms 6s713ms 19 5 32s696ms 6s539ms 20 8 52s656ms 6s582ms 21 3 19s785ms 6s595ms 22 2 13s595ms 6s797ms 23 4 27s357ms 6s839ms Aug 11 00 5 33s125ms 6s625ms 01 3 20s265ms 6s755ms 02 5 34s584ms 6s916ms 03 2 13s134ms 6s567ms 04 3 20s423ms 6s807ms 05 3 19s628ms 6s542ms 06 8 54s409ms 6s801ms 07 9 59s661ms 6s629ms 08 6 40s633ms 6s772ms 09 1 6s707ms 6s707ms 10 8 53s100ms 6s637ms 11 3 20s5ms 6s668ms 12 8 53s247ms 6s655ms 13 3 20s347ms 6s782ms 14 5 33s930ms 6s786ms 15 12 1m21s 6s790ms 16 8 53s147ms 6s643ms 17 5 33s383ms 6s676ms 18 5 32s962ms 6s592ms 19 8 54s557ms 6s819ms 20 5 33s755ms 6s751ms 21 2 13s706ms 6s853ms 22 6 40s404ms 6s734ms 23 5 33s674ms 6s734ms Aug 12 00 12 1m23s 6s966ms 01 2 13s765ms 6s882ms 02 9 1m2s 6s944ms 03 4 26s869ms 6s717ms 04 5 33s780ms 6s756ms 05 9 1m 6s761ms 06 8 54s686ms 6s835ms 07 8 55s489ms 6s936ms 08 12 1m21s 6s755ms 09 11 1m15s 6s832ms 10 10 1m7s 6s788ms 11 10 1m6s 6s691ms 12 10 1m7s 6s730ms 13 15 1m41s 6s777ms 14 13 1m29s 6s847ms 15 14 1m37s 6s929ms 16 10 1m10s 7s56ms 17 11 1m17s 7s26ms 18 11 1m17s 7s27ms 19 16 1m50s 6s919ms 20 22 2m32s 6s951ms 21 26 3m2s 7s14ms 22 25 2m57s 7s112ms 23 12 1m22s 6s836ms Aug 13 00 9 1m4s 7s207ms 01 16 1m50s 6s908ms 02 14 1m36s 6s927ms 03 15 1m45s 7s33ms 04 16 1m56s 7s255ms 05 1 7s489ms 7s489ms 06 15 1m46s 7s83ms 07 23 2m45s 7s188ms 08 14 1m40s 7s162ms 09 13 1m34s 7s257ms 10 18 2m5s 6s998ms 11 14 1m40s 7s167ms 12 9 1m3s 7s99ms 13 11 1m17s 7s54ms 14 13 1m34s 7s263ms 15 19 2m17s 7s259ms 16 10 1m11s 7s153ms 17 11 1m23s 7s576ms 18 17 2m9s 7s641ms 19 17 1m59s 7s49ms 20 8 58s393ms 7s299ms 21 13 1m34s 7s288ms 22 12 1m26s 7s200ms 23 35 6m52s 11s776ms Aug 14 00 28 4m47s 10s277ms 01 18 2m7s 7s63ms 02 3 20s360ms 6s786ms 03 9 1m3s 7s74ms 04 17 2m1s 7s122ms 05 15 1m58s 7s916ms 06 12 1m23s 6s940ms 07 12 1m24s 7s78ms 08 15 1m52s 7s523ms 09 28 3m31s 7s560ms 10 6 44s245ms 7s374ms 11 7 50s92ms 7s156ms 12 1 6s945ms 6s945ms 13 2 13s763ms 6s881ms 14 2 13s395ms 6s697ms 15 3 20s453ms 6s817ms 16 9 1m24s 9s423ms 17 1 7s101ms 7s101ms 19 5 35s830ms 7s166ms 20 3 22s889ms 7s629ms 22 2 14s117ms 7s58ms Aug 15 05 42 10m15s 14s659ms 06 89 26m43s 18s11ms 07 43 12m11s 17s12ms 08 59 13m27s 13s692ms 09 7 53s942ms 7s706ms 10 5 33s816ms 6s763ms 11 6 40s29ms 6s671ms 13 3 20s283ms 6s761ms 14 1 6s613ms 6s613ms [ User: pubeu - Total duration: 2h15m51s - Times executed: 1124 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1416967'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 06:43:45 Duration: 47s60ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1416967'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 07:05:19 Duration: 45s736ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1416967'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 06:47:41 Duration: 45s460ms Bind query: yes
9 2h36m36s 447 5s8ms 2m28s 21s21ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where phenotypeterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and associatedterm.object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Aug 10 00 6 1m15s 12s649ms 01 2 29s461ms 14s730ms 02 2 24s146ms 12s73ms 03 3 40s730ms 13s576ms 04 4 59s697ms 14s924ms 05 4 40s696ms 10s174ms 06 4 39s599ms 9s899ms 07 3 42s422ms 14s140ms 08 3 52s945ms 17s648ms 09 1 17s953ms 17s953ms 10 7 1m8s 9s733ms 11 4 58s567ms 14s641ms 12 2 29s535ms 14s767ms 13 3 28s946ms 9s648ms 14 1 16s826ms 16s826ms 16 1 5s626ms 5s626ms 20 1 17s474ms 17s474ms 21 1 6s71ms 6s71ms Aug 11 01 1 11s253ms 11s253ms 05 1 5s963ms 5s963ms 13 1 17s495ms 17s495ms 14 3 40s593ms 13s531ms 23 1 17s121ms 17s121ms Aug 12 00 1 17s595ms 17s595ms 04 1 11s575ms 11s575ms 05 1 17s733ms 17s733ms 07 1 17s385ms 17s385ms 08 4 1m3s 15s788ms 09 3 35s476ms 11s825ms 10 4 53s501ms 13s375ms 11 1 18s132ms 18s132ms 12 3 36s562ms 12s187ms 13 3 48s492ms 16s164ms 14 8 1m17s 9s727ms 15 4 52s32ms 13s8ms 16 5 1m 12s105ms 17 6 1m21s 13s620ms 18 3 29s673ms 9s891ms 19 2 18s367ms 9s183ms 20 4 42s340ms 10s585ms 21 6 1m7s 11s199ms 22 5 1m1s 12s280ms 23 2 24s703ms 12s351ms Aug 13 00 4 42s155ms 10s538ms 01 5 54s281ms 10s856ms 02 2 23s592ms 11s796ms 03 2 23s883ms 11s941ms 04 6 1m26s 14s386ms 05 1 18s586ms 18s586ms 06 7 2m8s 18s317ms 07 8 1m46s 13s253ms 08 5 1m20s 16s128ms 09 2 36s504ms 18s252ms 10 7 1m52s 16s8ms 11 4 56s822ms 14s205ms 12 3 37s720ms 12s573ms 13 3 43s622ms 14s540ms 14 4 35s430ms 8s857ms 15 3 23s728ms 7s909ms 16 5 41s541ms 8s308ms 17 8 1m34s 11s816ms 18 3 32s558ms 10s852ms 19 4 1m 15s32ms 20 4 34s615ms 8s653ms 21 2 10s302ms 5s151ms 22 4 57s707ms 14s426ms 23 4 1m25s 21s298ms Aug 14 00 38 8m58s 14s158ms 01 3 29s982ms 9s994ms 02 5 1m2s 12s506ms 03 5 1m8s 13s751ms 04 2 35s451ms 17s725ms 05 5 46s970ms 9s394ms 06 4 25s555ms 6s388ms 09 3 43s546ms 14s515ms 12 2 18s562ms 9s281ms 15 5 1m28s 17s654ms 16 23 14m25s 37s625ms 18 1 12s471ms 12s471ms 19 1 11s742ms 11s742ms Aug 15 05 16 11m18s 42s406ms 06 57 40m47s 42s937ms 07 21 12m40s 36s221ms 08 18 9m8s 30s487ms 09 5 1m25s 17s121ms 10 2 34s804ms 17s402ms 11 2 34s536ms 17s268ms 12 3 50s259ms 16s753ms [ User: pubeu - Total duration: 1h8m42s - Times executed: 290 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1239590'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 08:42:14 Duration: 2m28s Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1239590'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 06:45:32 Duration: 2m1s Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1239590'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 06:49:05 Duration: 1m59s Bind query: yes
10 1h34m50s 521 5s1ms 50s854ms 10s922ms select e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, ( select string_agg(distinct stressorterm.nm || ? || ( select cd from object_type where id = stressorterm.object_type_id) || ? || stressorterm.nm_html || ? || stressorterm.acc_txt || ? || stressorterm.acc_db_cd, ?)) as stressoragents, ( select string_agg(distinct coalesce(receptorterm.nm, ?) || ? || coalesce(( select cd from object_type where id = receptorterm.object_type_id), ?) || ? || coalesce(receptorterm.nm_html, ?) || ? || coalesce(receptorterm.acc_txt, ?) || ? || coalesce(receptorterm.acc_db_cd, ?) || ? || receptor.description, ?)) as receptors, ( select string_agg(distinct country.nm, ?)) as studycountries, ( select string_agg(distinct location.locality_txt, ?)) as localities, ( select string_agg(distinct event.medium_nm || ? || coalesce(event.medium_term_acc_txt, ?), ?)) as assaymediums, ( select string_agg(distinct exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd, ?)) as assayedmarkers, ( select string_agg(distinct diseaseterm.nm || ? || ( select cd from object_type where id = diseaseterm.object_type_id) || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd, ?)) as diseases, ( select string_agg(distinct phenotypeterm.nm || ? || ( select cd from object_type where id = phenotypeterm.object_type_id) || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd, ?)) as phenotypes, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, re.author_summary summary, count(*) over () fullrowcount from exposure e inner join reference r on e.reference_id = r.id inner join exp_stressor stressor on e.exp_stressor_id = stressor.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join term receptorterm on receptor.term_id = receptorterm.id left outer join exp_event event on e.exp_event_id = event.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join exp_event_location location on e.exp_event_id = location.exp_event_id left outer join country on location.country_id = country.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id inner join reference_exp re on e.reference_id = re.reference_id left outer join exp_study_factor expstudyfactor on re.id = expstudyfactor.reference_exp_id where e.reference_id = any (array ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like ?) and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressoragents limit ?;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Aug 10 00 1 5s62ms 5s62ms 05 4 28s210ms 7s52ms 07 2 12s786ms 6s393ms 08 8 1m9s 8s683ms 09 19 3m5s 9s746ms 10 4 23s497ms 5s874ms 11 3 18s324ms 6s108ms Aug 11 02 1 5s716ms 5s716ms 06 2 11s77ms 5s538ms Aug 12 02 3 24s509ms 8s169ms 10 1 6s743ms 6s743ms 11 1 5s59ms 5s59ms 13 3 19s197ms 6s399ms 14 1 5s638ms 5s638ms 15 1 5s68ms 5s68ms 18 8 50s377ms 6s297ms 20 2 10s275ms 5s137ms 21 7 38s623ms 5s517ms 22 4 22s855ms 5s713ms 23 1 5s776ms 5s776ms Aug 13 02 2 10s217ms 5s108ms 03 1 8s96ms 8s96ms 04 2 11s334ms 5s667ms 05 1 5s391ms 5s391ms 06 4 21s584ms 5s396ms 07 2 12s300ms 6s150ms 08 6 40s844ms 6s807ms 09 2 13s580ms 6s790ms 11 3 22s346ms 7s448ms 12 4 21s787ms 5s446ms 13 2 11s103ms 5s551ms 14 5 30s974ms 6s194ms 15 8 44s997ms 5s624ms 16 2 10s396ms 5s198ms 17 4 24s386ms 6s96ms 18 3 15s891ms 5s297ms 19 6 34s648ms 5s774ms 20 5 25s968ms 5s193ms 21 6 33s909ms 5s651ms 22 6 34s82ms 5s680ms 23 21 4m59s 14s277ms Aug 14 00 16 2m13s 8s314ms 01 2 14s578ms 7s289ms 02 3 19s80ms 6s360ms 03 4 21s94ms 5s273ms 04 2 10s21ms 5s10ms 05 6 37s848ms 6s308ms 06 4 21s292ms 5s323ms 07 1 5s180ms 5s180ms 08 5 27s903ms 5s580ms 09 13 1m31s 7s50ms 11 1 5s225ms 5s225ms 12 1 5s29ms 5s29ms 15 1 5s101ms 5s101ms 16 4 31s575ms 7s893ms 19 2 10s836ms 5s418ms 20 2 11s373ms 5s686ms 21 1 5s643ms 5s643ms Aug 15 05 69 13m15s 11s532ms 06 95 25m33s 16s144ms 07 36 10m3s 16s774ms 08 80 16m40s 12s511ms 09 2 12s821ms 6s410ms [ User: pubeu - Total duration: 27m1s - Times executed: 237 ]
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-08-15 06:46:20 Duration: 50s854ms Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-08-15 06:55:39 Duration: 48s997ms Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-08-15 06:33:08 Duration: 45s275ms Bind query: yes
11 1h27m39s 422 5s34ms 23s367ms 12s463ms with recursive sub_node ( object_id, id, path, lvl ) as ( select n.object_id, n.id, array[n.nm_sort], ? from dag_node n where n.object_id = ? union all select n.object_id, n.id, cast(path || n.nm_sort as varchar(?)[]), sn.lvl + ? from dag_node n inner join sub_node sn on (n.parent_id = sn.id)) select distinct t.nm prinm, t.nm_html prinmhtml, t.secondary_nm secondarynm, t.acc_db_cd accdbcd, t.acc_txt termacc, t.is_leaf isleaf, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_genes hasgenes, sn.lvl, sn.path, max(sn.lvl) over () maxlvl, t.has_phenotypes hasphenotypes from sub_node sn inner join term t on sn.object_id = t.id where sn.lvl <= ? order by sn.path;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Aug 13 23 2 14s591ms 7s295ms Aug 14 00 1 5s459ms 5s459ms Aug 15 05 80 15m52s 11s901ms 06 197 44m38s 13s595ms 07 62 15m4s 14s587ms 08 78 11m34s 8s901ms 09 2 10s444ms 5s222ms [ User: pubeu - Total duration: 4m15s - Times executed: 32 ]
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '663702' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 4 ORDER BY sn.path;
Date: 2025-08-15 07:02:24 Duration: 23s367ms Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '663702' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 4 ORDER BY sn.path;
Date: 2025-08-15 06:47:22 Duration: 22s598ms Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '663702' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 4 ORDER BY sn.path;
Date: 2025-08-15 06:50:11 Duration: 22s186ms Bind query: yes
12 1h8m5s 5 13m4s 14m3s 13m37s select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id where gcr.gene_id = any (array (( select gi.id gene_id from term gi where gi.object_type_id = ? and upper(gi.nm) like ?) intersect ( select ai.gene_id from dag_path pi inner join gene_go_annot ai on pi.descendant_object_id = ai.go_term_id inner join db_link dbli on dbli.object_id = pi.ancestor_object_id where dbli.acc_txt = ? and dbli.type_cd = ? and dbli.object_type_id = ?) intersect ( select tp.term_id from term_pathway tp where tp.object_type_id = ? and upper(tp.pathway_acc_txt) = ? and tp.pathway_acc_db_cd = ?))) and gcr.chem_id = any (array ( select dp.descendant_object_id from dag_path dp inner join term t on t.id = dp.ancestor_object_id where upper(t.nm) like ? and t.object_type_id = ?)) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?)) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by c.nm_sort, g.nm_sort, i.sort_txt limit ?;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Aug 10 17 2 27m14s 13m37s 18 3 40m51s 13m37s [ User: pubeu - Total duration: 55m1s - Times executed: 4 ]
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'ESR1') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'R-HSA-2161541' AND tp.pathway_acc_db_cd = 'REACT'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'TAMOXIFEN' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2025-08-10 18:10:51 Duration: 14m3s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'ESR1') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'R-HSA-2161541' AND tp.pathway_acc_db_cd = 'REACT'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'TAMOXIFEN' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2025-08-10 18:12:02 Duration: 13m44s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'ESR1') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'R-HSA-2161541' AND tp.pathway_acc_db_cd = 'REACT'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'TAMOXIFEN' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2025-08-10 17:47:10 Duration: 13m42s Database: ctdprd51 User: pubeu Bind query: yes
13 1h5m6s 7 9m7s 9m36s 9m18s select maint_query_logs_archive ();Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Aug 10 00 1 9m13s 9m13s Aug 11 00 1 9m7s 9m7s Aug 12 00 1 9m7s 9m7s Aug 13 00 1 9m22s 9m22s Aug 14 00 1 9m36s 9m36s Aug 15 00 1 9m29s 9m29s Aug 16 00 1 9m10s 9m10s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-08-14 00:09:37 Duration: 9m36s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-08-15 00:09:30 Duration: 9m29s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-08-13 00:09:24 Duration: 9m22s
14 1h44s 491 5s9ms 43s920ms 7s423ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Aug 10 00 3 18s765ms 6s255ms 01 12 1m15s 6s304ms 02 3 18s669ms 6s223ms 03 3 18s799ms 6s266ms 04 1 6s384ms 6s384ms 05 3 17s422ms 5s807ms 06 6 36s234ms 6s39ms 07 7 44s357ms 6s336ms 08 5 33s943ms 6s788ms 09 4 27s536ms 6s884ms 10 1 6s633ms 6s633ms 11 2 11s829ms 5s914ms 12 3 17s188ms 5s729ms 13 2 12s39ms 6s19ms 16 1 5s114ms 5s114ms 17 4 23s775ms 5s943ms 18 1 6s816ms 6s816ms 19 1 5s458ms 5s458ms 20 3 16s85ms 5s361ms 21 4 20s608ms 5s152ms 22 1 5s454ms 5s454ms Aug 11 01 1 5s272ms 5s272ms 03 1 6s928ms 6s928ms 04 1 5s136ms 5s136ms 06 5 28s371ms 5s674ms 07 7 41s713ms 5s959ms 10 9 51s216ms 5s690ms 12 4 23s588ms 5s897ms 13 8 47s912ms 5s989ms 14 3 18s775ms 6s258ms 15 2 12s752ms 6s376ms 19 2 11s951ms 5s975ms 21 1 5s742ms 5s742ms 22 1 6s37ms 6s37ms 23 1 6s77ms 6s77ms Aug 12 00 5 31s286ms 6s257ms 01 1 6s490ms 6s490ms 02 4 27s116ms 6s779ms 03 2 12s262ms 6s131ms 05 2 12s54ms 6s27ms 07 2 12s425ms 6s212ms 08 1 5s535ms 5s535ms 09 1 5s686ms 5s686ms 10 1 5s632ms 5s632ms 11 3 18s50ms 6s16ms 12 3 19s70ms 6s356ms 13 3 16s497ms 5s499ms 14 3 17s922ms 5s974ms 15 3 19s236ms 6s412ms 16 5 32s183ms 6s436ms 17 2 12s584ms 6s292ms 18 4 25s4ms 6s251ms 19 8 51s152ms 6s394ms 20 5 31s546ms 6s309ms 21 5 32s734ms 6s546ms 22 4 26s293ms 6s573ms 23 12 1m15s 6s268ms Aug 13 00 2 13s501ms 6s750ms 01 4 25s130ms 6s282ms 02 4 25s142ms 6s285ms 03 6 38s268ms 6s378ms 04 10 1m6s 6s686ms 06 6 38s51ms 6s341ms 07 3 17s132ms 5s710ms 08 6 39s961ms 6s660ms 09 9 57s786ms 6s420ms 10 8 54s323ms 6s790ms 11 9 57s231ms 6s359ms 12 6 42s23ms 7s3ms 13 5 30s796ms 6s159ms 14 5 32s766ms 6s553ms 15 8 55s473ms 6s934ms 16 2 14s550ms 7s275ms 17 4 28s756ms 7s189ms 18 6 41s232ms 6s872ms 19 2 12s65ms 6s32ms 20 5 34s67ms 6s813ms 21 2 13s450ms 6s725ms 22 2 13s925ms 6s962ms 23 20 4m 12s5ms Aug 14 00 5 34s138ms 6s827ms 01 4 28s366ms 7s91ms 02 6 43s709ms 7s284ms 03 9 1m 6s677ms 04 4 28s897ms 7s224ms 05 7 46s889ms 6s698ms 06 6 38s860ms 6s476ms 07 6 40s297ms 6s716ms 08 6 40s846ms 6s807ms 09 6 40s58ms 6s676ms 10 7 44s628ms 6s375ms 11 6 41s824ms 6s970ms 12 2 13s51ms 6s525ms 13 6 38s721ms 6s453ms 14 1 6s351ms 6s351ms 15 4 27s134ms 6s783ms 16 13 2m29s 11s524ms 19 13 1m23s 6s456ms 20 21 2m18s 6s572ms 21 1 6s502ms 6s502ms 22 9 1m5s 7s250ms 23 4 24s982ms 6s245ms Aug 15 05 3 1m14s 24s948ms 06 7 4m17s 36s799ms 07 1 40s963ms 40s963ms 08 2 23s695ms 11s847ms 12 1 5s684ms 5s684ms Aug 16 14 1 5s578ms 5s578ms 18 1 5s202ms 5s202ms [ User: pubeu - Total duration: 48m40s - Times executed: 435 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1435886' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-08-15 06:55:17 Duration: 43s920ms Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1435886' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-08-15 06:55:06 Duration: 43s691ms Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1330887' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-08-15 07:08:51 Duration: 40s963ms Bind query: yes
15 1h 260 5s6ms 52s592ms 13s848ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.ixn_id = any (array (( select ixn_id from ixn_anatomy where anatomy_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?)))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Aug 10 08 1 7s837ms 7s837ms Aug 12 13 1 7s630ms 7s630ms 18 1 7s625ms 7s625ms 19 1 7s988ms 7s988ms Aug 13 00 1 8s186ms 8s186ms 02 1 8s175ms 8s175ms 04 1 7s908ms 7s908ms 05 1 8s17ms 8s17ms 09 1 8s681ms 8s681ms 11 1 7s811ms 7s811ms 18 1 7s635ms 7s635ms 23 2 32s631ms 16s315ms Aug 14 00 2 12s817ms 6s408ms 04 1 7s729ms 7s729ms Aug 15 05 58 16m10s 16s738ms 06 116 26m42s 13s812ms 07 30 6m14s 12s490ms 08 31 7m23s 14s320ms 09 5 38s189ms 7s637ms 10 1 7s469ms 7s469ms 13 1 7s572ms 7s572ms 14 2 15s6ms 7s503ms [ User: pubeu - Total duration: 5m6s - Times executed: 33 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.ixn_id = ANY (ARRAY (( select ixn_id from ixn_anatomy where anatomy_id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2117193')))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 06:44:50 Duration: 52s592ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.ixn_id = ANY (ARRAY (( select ixn_id from ixn_anatomy where anatomy_id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2117193')))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 06:43:56 Duration: 51s491ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.ixn_id = ANY (ARRAY (( select ixn_id from ixn_anatomy where anatomy_id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2117193')))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 07:02:49 Duration: 51s391ms Bind query: yes
16 37m44s 224 5s7ms 31s325ms 10s109ms select * from ( select g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, count(*) over () fullrowcount from term g where g.id in ( select gt.gene_id from dag_path dp inner join gene_taxon gt on dp.descendant_object_id = gt.taxon_id where dp.ancestor_object_id = ? union all select gcr.gene_id from dag_path dp inner join gene_chem_reference gcr on dp.descendant_object_id = gcr.taxon_id where dp.ancestor_object_id = ?) offset ?) mq order by mq.genesymbolsort limit ? offset ?;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Aug 12 22 1 6s417ms 6s417ms Aug 13 03 2 10s565ms 5s282ms 06 1 5s465ms 5s465ms 07 1 5s102ms 5s102ms 08 1 5s69ms 5s69ms 09 2 13s48ms 6s524ms 10 7 41s402ms 5s914ms 13 1 5s7ms 5s7ms 14 1 5s121ms 5s121ms 15 3 23s76ms 7s692ms 18 1 5s62ms 5s62ms 19 2 10s103ms 5s51ms 20 1 5s446ms 5s446ms 23 4 1m30s 22s536ms Aug 14 00 18 2m47s 9s280ms 01 2 15s600ms 7s800ms 04 2 11s39ms 5s519ms 05 2 13s485ms 6s742ms 06 1 5s537ms 5s537ms 10 1 5s473ms 5s473ms 11 1 5s43ms 5s43ms 13 1 8s18ms 8s18ms 16 37 4m23s 7s129ms 20 1 5s144ms 5s144ms 22 6 41s73ms 6s845ms 23 2 10s996ms 5s498ms Aug 15 05 26 4m16s 9s879ms 06 60 12m59s 12s992ms 07 30 6m35s 13s173ms 08 6 49s605ms 8s267ms [ User: pubeu - Total duration: 10m25s - Times executed: 85 ]
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '663702' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '663702') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50 OFFSET 500;
Date: 2025-08-13 23:28:47 Duration: 31s325ms Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '663702' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '663702') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50 OFFSET 450;
Date: 2025-08-13 23:28:25 Duration: 29s1ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '663702' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '663702') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50 OFFSET 550;
Date: 2025-08-13 23:28:09 Duration: 24s92ms Database: ctdprd51 User: pubeu Bind query: yes
17 37m30s 4 9m17s 9m25s 9m22s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by genenetworkcount desc limit ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Aug 12 10 4 37m30s 9m22s [ User: pubeu - Total duration: 37m30s - Times executed: 4 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY geneNetworkCount DESC LIMIT 50;
Date: 2025-08-12 10:20:02 Duration: 9m25s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY geneNetworkCount DESC LIMIT 50;
Date: 2025-08-12 10:18:47 Duration: 9m24s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY geneNetworkCount DESC LIMIT 50;
Date: 2025-08-12 10:18:30 Duration: 9m23s Database: ctdprd51 User: pubeu Bind query: yes
18 36m35s 285 5s16ms 35s909ms 7s702ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ? offset ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Aug 10 06 1 5s680ms 5s680ms 13 1 5s861ms 5s861ms 18 1 7s209ms 7s209ms Aug 11 05 1 5s541ms 5s541ms 08 2 35s579ms 17s789ms 10 1 8s943ms 8s943ms 23 2 10s736ms 5s368ms Aug 12 00 1 5s474ms 5s474ms 10 1 9s962ms 9s962ms 14 3 15s439ms 5s146ms 16 4 25s216ms 6s304ms 17 3 16s710ms 5s570ms 18 10 1m14s 7s420ms 19 4 21s549ms 5s387ms 21 3 22s70ms 7s356ms 22 4 22s129ms 5s532ms Aug 13 00 3 16s520ms 5s506ms 01 1 5s134ms 5s134ms 03 1 5s97ms 5s97ms 04 2 41s238ms 20s619ms 06 1 14s956ms 14s956ms 07 1 5s104ms 5s104ms 08 5 28s155ms 5s631ms 10 3 16s735ms 5s578ms 11 1 5s958ms 5s958ms 12 1 5s190ms 5s190ms 13 10 56s926ms 5s692ms 15 3 17s552ms 5s850ms 16 2 13s344ms 6s672ms 18 4 24s774ms 6s193ms 19 6 36s71ms 6s11ms 20 4 22s88ms 5s522ms 21 1 5s464ms 5s464ms 22 3 27s696ms 9s232ms 23 13 1m32s 7s144ms Aug 14 00 14 1m34s 6s776ms 02 2 10s480ms 5s240ms 03 1 5s16ms 5s16ms 04 8 45s975ms 5s746ms 05 28 3m34s 7s643ms 07 2 12s290ms 6s145ms 08 1 5s119ms 5s119ms 09 1 10s970ms 10s970ms 10 1 11s682ms 11s682ms 12 1 5s100ms 5s100ms 13 2 10s186ms 5s93ms 14 3 15s554ms 5s184ms 15 3 18s391ms 6s130ms 16 7 1m4s 9s229ms 17 3 22s970ms 7s656ms 18 1 7s851ms 7s851ms 19 5 27s930ms 5s586ms 20 6 36s669ms 6s111ms 21 3 16s623ms 5s541ms 22 12 1m38s 8s190ms 23 35 3m17s 5s656ms Aug 15 00 2 38s340ms 19s170ms 05 2 37s66ms 18s533ms 06 21 4m33s 13s28ms 07 3 27s710ms 9s236ms 08 11 2m32s 13s869ms [ User: pubeu - Total duration: 25m33s - Times executed: 223 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2112418') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 3969900;
Date: 2025-08-13 04:54:55 Duration: 35s909ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2101651') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 4665100;
Date: 2025-08-14 05:58:09 Duration: 33s232ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2112418') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 3969900;
Date: 2025-08-15 00:18:31 Duration: 33s31ms Database: ctdprd51 User: pubeu Bind query: yes
19 34m7s 214 5s5ms 20s369ms 9s568ms select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where diseaseterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Aug 10 09 1 5s5ms 5s5ms Aug 13 23 5 37s320ms 7s464ms Aug 15 05 35 6m2s 10s345ms 06 98 16m 9s797ms 07 37 5m59s 9s727ms 08 38 5m23s 8s502ms [ User: pubeu - Total duration: 3m3s - Times executed: 17 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2100341') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-08-15 07:04:45 Duration: 20s369ms Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2103600') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-08-15 08:37:53 Duration: 20s73ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2100341') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-08-15 07:06:11 Duration: 19s747ms Bind query: yes
20 26m30s 203 5s26ms 17s50ms 7s836ms select c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposurereferencecount, case when cd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from chem_disease_axn a where a.chem_id = cd.chem_id and a.disease_id = cd.disease_id) else null end actiontypes from chem_disease cd inner join term c on cd.chem_id = c.id inner join term d on cd.disease_id = d.id where cd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, cd.network_score desc nulls last, d.nm_sort, c.nm_sort limit ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Aug 13 23 5 39s801ms 7s960ms Aug 15 05 35 4m26s 7s603ms 06 104 13m51s 7s993ms 07 34 4m46s 8s421ms 08 25 2m47s 6s694ms [ User: pubeu - Total duration: 1m10s - Times executed: 8 ]
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2025-08-15 06:50:50 Duration: 17s50ms Bind query: yes
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2025-08-15 06:38:32 Duration: 13s933ms Bind query: yes
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2105591') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2025-08-15 07:21:48 Duration: 13s578ms Bind query: yes
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 3,921 11h32m19s 5s3ms 16s558ms 10s594ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where exposuremarkerterm.id = ? or receptorterm.id = ? group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Aug 10 09 2 11s218ms 5s609ms Aug 13 10 1 5s124ms 5s124ms 11 1 5s375ms 5s375ms 12 2 10s519ms 5s259ms 17 1 5s143ms 5s143ms 23 58 7m36s 7s864ms Aug 14 00 124 17m33s 8s497ms 01 3 17s158ms 5s719ms 05 3 18s788ms 6s262ms 06 1 5s404ms 5s404ms 09 1 6s412ms 6s412ms 16 115 13m4s 6s821ms 22 1 5s612ms 5s612ms Aug 15 00 5 41s629ms 8s325ms 05 725 1h53m52s 9s424ms 06 1,670 5h23m4s 11s607ms 07 548 2h8s 13s154ms 08 660 1h34m46s 8s616ms [ User: pubeu - Total duration: 46m7s - Times executed: 363 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '2098302' or receptorTerm.id = '2098302' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-08-15 06:44:28 Duration: 16s558ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1603623' or receptorTerm.id = '1603623' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-08-15 07:04:10 Duration: 16s523ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1972847' or receptorTerm.id = '1972847' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-08-15 06:44:59 Duration: 16s490ms Bind query: yes
2 1,800 6h30m57s 5s2ms 1m24s 13s31ms select * from ( select g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, count(*) over () fullrowcount from term g where g.id in ( select gt.gene_id from dag_path dp inner join gene_taxon gt on dp.descendant_object_id = gt.taxon_id where dp.ancestor_object_id = ? union all select gcr.gene_id from dag_path dp inner join gene_chem_reference gcr on dp.descendant_object_id = gcr.taxon_id where dp.ancestor_object_id = ?) offset ?) mq order by mq.genesymbolsort limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Aug 10 00 5 32s545ms 6s509ms 01 2 13s512ms 6s756ms 04 3 19s238ms 6s412ms 05 2 12s714ms 6s357ms 06 1 6s443ms 6s443ms 07 1 6s498ms 6s498ms 09 1 9s196ms 9s196ms 10 1 6s691ms 6s691ms 16 1 6s466ms 6s466ms Aug 12 08 1 5s986ms 5s986ms 09 2 13s94ms 6s547ms 11 1 6s172ms 6s172ms 14 2 12s652ms 6s326ms 18 3 17s127ms 5s709ms 20 2 12s949ms 6s474ms 21 1 6s312ms 6s312ms 23 3 19s188ms 6s396ms Aug 13 02 1 7s864ms 7s864ms 04 1 6s476ms 6s476ms 06 2 13s161ms 6s580ms 07 3 19s735ms 6s578ms 09 1 6s529ms 6s529ms 10 1 6s356ms 6s356ms 11 3 17s913ms 5s971ms 12 1 6s269ms 6s269ms 13 1 6s743ms 6s743ms 14 1 6s331ms 6s331ms 15 5 35s684ms 7s136ms 17 4 22s624ms 5s656ms 19 1 5s334ms 5s334ms 21 1 7s213ms 7s213ms 22 2 14s220ms 7s110ms 23 39 5m22s 8s264ms Aug 14 00 72 11m7s 9s270ms 01 2 14s888ms 7s444ms 02 3 19s771ms 6s590ms 04 1 8s906ms 8s906ms 05 7 46s255ms 6s607ms 08 1 7s165ms 7s165ms 09 2 12s158ms 6s79ms 11 3 18s388ms 6s129ms 15 1 6s673ms 6s673ms 16 36 4m13s 7s29ms 22 2 10s802ms 5s401ms 23 1 6s130ms 6s130ms Aug 15 00 6 49s512ms 8s252ms 05 283 1h5m2s 13s789ms 06 681 2h46m10s 14s640ms 07 215 1h6m28s 18s551ms 08 356 59m43s 10s66ms 09 5 31s52ms 6s210ms 10 7 42s958ms 6s136ms 11 10 1m2s 6s228ms 12 5 31s124ms 6s224ms 13 2 12s189ms 6s94ms [ User: pubeu - Total duration: 39m31s - Times executed: 308 ]
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '663702' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '663702') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-08-15 07:03:13 Duration: 1m24s Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '663702' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '663702') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-08-15 06:53:34 Duration: 1m20s Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '663702' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '663702') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-08-15 06:50:13 Duration: 1m16s Bind query: yes
3 1,471 3h32m39s 5s12ms 47s60ms 8s674ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where associatedterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Aug 10 00 11 1m15s 6s907ms 01 26 2m59s 6s900ms 02 13 1m29s 6s878ms 03 15 1m42s 6s802ms 04 13 1m28s 6s771ms 05 11 1m14s 6s787ms 06 5 34s646ms 6s929ms 07 21 2m26s 6s963ms 08 20 2m26s 7s325ms 09 34 4m35s 8s106ms 10 10 1m16s 7s641ms 11 12 1m21s 6s785ms 12 7 47s697ms 6s813ms 13 12 1m21s 6s800ms 14 5 33s950ms 6s790ms 15 6 40s762ms 6s793ms 16 8 54s601ms 6s825ms 17 6 40s120ms 6s686ms 18 5 33s567ms 6s713ms 19 5 32s696ms 6s539ms 20 8 52s656ms 6s582ms 21 3 19s785ms 6s595ms 22 2 13s595ms 6s797ms 23 4 27s357ms 6s839ms Aug 11 00 5 33s125ms 6s625ms 01 3 20s265ms 6s755ms 02 5 34s584ms 6s916ms 03 2 13s134ms 6s567ms 04 3 20s423ms 6s807ms 05 3 19s628ms 6s542ms 06 8 54s409ms 6s801ms 07 9 59s661ms 6s629ms 08 6 40s633ms 6s772ms 09 1 6s707ms 6s707ms 10 8 53s100ms 6s637ms 11 3 20s5ms 6s668ms 12 8 53s247ms 6s655ms 13 3 20s347ms 6s782ms 14 5 33s930ms 6s786ms 15 12 1m21s 6s790ms 16 8 53s147ms 6s643ms 17 5 33s383ms 6s676ms 18 5 32s962ms 6s592ms 19 8 54s557ms 6s819ms 20 5 33s755ms 6s751ms 21 2 13s706ms 6s853ms 22 6 40s404ms 6s734ms 23 5 33s674ms 6s734ms Aug 12 00 12 1m23s 6s966ms 01 2 13s765ms 6s882ms 02 9 1m2s 6s944ms 03 4 26s869ms 6s717ms 04 5 33s780ms 6s756ms 05 9 1m 6s761ms 06 8 54s686ms 6s835ms 07 8 55s489ms 6s936ms 08 12 1m21s 6s755ms 09 11 1m15s 6s832ms 10 10 1m7s 6s788ms 11 10 1m6s 6s691ms 12 10 1m7s 6s730ms 13 15 1m41s 6s777ms 14 13 1m29s 6s847ms 15 14 1m37s 6s929ms 16 10 1m10s 7s56ms 17 11 1m17s 7s26ms 18 11 1m17s 7s27ms 19 16 1m50s 6s919ms 20 22 2m32s 6s951ms 21 26 3m2s 7s14ms 22 25 2m57s 7s112ms 23 12 1m22s 6s836ms Aug 13 00 9 1m4s 7s207ms 01 16 1m50s 6s908ms 02 14 1m36s 6s927ms 03 15 1m45s 7s33ms 04 16 1m56s 7s255ms 05 1 7s489ms 7s489ms 06 15 1m46s 7s83ms 07 23 2m45s 7s188ms 08 14 1m40s 7s162ms 09 13 1m34s 7s257ms 10 18 2m5s 6s998ms 11 14 1m40s 7s167ms 12 9 1m3s 7s99ms 13 11 1m17s 7s54ms 14 13 1m34s 7s263ms 15 19 2m17s 7s259ms 16 10 1m11s 7s153ms 17 11 1m23s 7s576ms 18 17 2m9s 7s641ms 19 17 1m59s 7s49ms 20 8 58s393ms 7s299ms 21 13 1m34s 7s288ms 22 12 1m26s 7s200ms 23 35 6m52s 11s776ms Aug 14 00 28 4m47s 10s277ms 01 18 2m7s 7s63ms 02 3 20s360ms 6s786ms 03 9 1m3s 7s74ms 04 17 2m1s 7s122ms 05 15 1m58s 7s916ms 06 12 1m23s 6s940ms 07 12 1m24s 7s78ms 08 15 1m52s 7s523ms 09 28 3m31s 7s560ms 10 6 44s245ms 7s374ms 11 7 50s92ms 7s156ms 12 1 6s945ms 6s945ms 13 2 13s763ms 6s881ms 14 2 13s395ms 6s697ms 15 3 20s453ms 6s817ms 16 9 1m24s 9s423ms 17 1 7s101ms 7s101ms 19 5 35s830ms 7s166ms 20 3 22s889ms 7s629ms 22 2 14s117ms 7s58ms Aug 15 05 42 10m15s 14s659ms 06 89 26m43s 18s11ms 07 43 12m11s 17s12ms 08 59 13m27s 13s692ms 09 7 53s942ms 7s706ms 10 5 33s816ms 6s763ms 11 6 40s29ms 6s671ms 13 3 20s283ms 6s761ms 14 1 6s613ms 6s613ms [ User: pubeu - Total duration: 2h15m51s - Times executed: 1124 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1416967'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 06:43:45 Duration: 47s60ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1416967'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 07:05:19 Duration: 45s736ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1416967'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 06:47:41 Duration: 45s460ms Bind query: yes
4 1,435 4h1m23s 5s1ms 19s628ms 10s92ms select count(*) from gene_disease gd where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?);Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Aug 10 08 1 7s113ms 7s113ms Aug 13 11 1 5s90ms 5s90ms 13 1 5s39ms 5s39ms 17 2 10s221ms 5s110ms 18 1 5s157ms 5s157ms 23 152 18m6s 7s149ms Aug 14 00 71 9m48s 8s283ms 05 5 27s421ms 5s484ms 09 1 5s699ms 5s699ms 16 100 10m36s 6s361ms Aug 15 00 5 41s639ms 8s327ms 05 181 30m52s 10s235ms 06 475 1h32m25s 11s675ms 07 203 44m23s 13s122ms 08 236 33m22s 8s484ms [ User: pubeu - Total duration: 24m56s - Times executed: 214 ]
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SELECT /* DiseaseGeneAssnsDAO.rowCount */ COUNT(*) FROM gene_disease gd WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341');
Date: 2025-08-15 06:47:59 Duration: 19s628ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO.rowCount */ COUNT(*) FROM gene_disease gd WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341');
Date: 2025-08-15 07:02:56 Duration: 19s565ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO.rowCount */ COUNT(*) FROM gene_disease gd WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341');
Date: 2025-08-15 07:05:57 Duration: 19s438ms Bind query: yes
5 1,275 7h46m5s 5s 2m3s 21s933ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Aug 10 00 1 7s362ms 7s362ms 01 3 25s83ms 8s361ms 02 1 5s367ms 5s367ms 03 5 28s950ms 5s790ms 04 1 6s606ms 6s606ms 05 2 14s506ms 7s253ms 06 4 34s832ms 8s708ms 07 2 13s265ms 6s632ms 08 3 16s237ms 5s412ms 09 1 10s238ms 10s238ms 10 1 11s414ms 11s414ms 11 3 23s18ms 7s672ms 12 1 5s414ms 5s414ms 13 1 5s788ms 5s788ms 14 1 6s597ms 6s597ms 19 1 5s456ms 5s456ms Aug 11 01 1 5s858ms 5s858ms 07 2 11s147ms 5s573ms 08 1 5s321ms 5s321ms 13 2 16s313ms 8s156ms 15 1 5s58ms 5s58ms 19 1 5s85ms 5s85ms Aug 12 00 2 12s912ms 6s456ms 02 1 5s860ms 5s860ms 06 2 11s683ms 5s841ms 07 2 12s133ms 6s66ms 09 4 24s311ms 6s77ms 10 2 16s391ms 8s195ms 11 1 6s86ms 6s86ms 12 3 22s100ms 7s366ms 13 5 36s522ms 7s304ms 14 4 26s479ms 6s619ms 15 3 19s834ms 6s611ms 16 2 16s536ms 8s268ms 17 1 6s85ms 6s85ms 18 3 18s686ms 6s228ms 19 2 11s754ms 5s877ms 20 3 16s27ms 5s342ms 21 3 25s113ms 8s371ms 22 6 36s969ms 6s161ms 23 7 59s 8s428ms Aug 13 00 2 12s442ms 6s221ms 01 2 11s390ms 5s695ms 02 3 17s15ms 5s671ms 03 3 24s354ms 8s118ms 04 3 23s558ms 7s852ms 05 2 11s268ms 5s634ms 06 6 44s972ms 7s495ms 07 4 28s189ms 7s47ms 09 2 14s765ms 7s382ms 10 4 29s70ms 7s267ms 11 2 12s180ms 6s90ms 12 3 20s758ms 6s919ms 13 8 1m8s 8s615ms 14 2 13s661ms 6s830ms 15 6 42s590ms 7s98ms 16 3 23s691ms 7s897ms 17 4 36s24ms 9s6ms 18 3 22s767ms 7s589ms 19 2 18s427ms 9s213ms 20 1 12s233ms 12s233ms 21 3 24s173ms 8s57ms 22 5 37s682ms 7s536ms 23 52 15m3s 17s376ms Aug 14 00 6 1m1s 10s288ms 01 4 38s767ms 9s691ms 02 2 10s401ms 5s200ms 03 4 37s84ms 9s271ms 04 4 25s865ms 6s466ms 05 2 11s607ms 5s803ms 06 1 5s76ms 5s76ms 07 2 12s242ms 6s121ms 08 2 11s956ms 5s978ms 09 7 55s404ms 7s914ms 10 4 36s134ms 9s33ms 11 1 5s472ms 5s472ms 12 1 5s488ms 5s488ms 15 1 7s645ms 7s645ms 16 1 14s775ms 14s775ms 22 2 12s113ms 6s56ms Aug 15 00 1 10s799ms 10s799ms 05 170 1h20m21s 28s362ms 06 336 2h53m45s 31s28ms 07 135 1h28m1s 39s122ms 08 285 1h12m29s 15s262ms 09 18 2m34s 8s570ms 10 12 1m35s 7s980ms 11 22 2m30s 6s850ms 12 20 2m9s 6s472ms 13 8 53s805ms 6s725ms 14 4 33s135ms 8s283ms [ User: pubeu - Total duration: 1h11m12s - Times executed: 430 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-08-15 07:05:38 Duration: 2m3s Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-08-15 06:47:30 Duration: 2m3s Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-08-15 07:05:13 Duration: 2m2s Bind query: yes
6 949 4h9m11s 5s1ms 5m51s 15s754ms select r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refacc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, count(*) over () fullrowcount from reference r where r.id in ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) order by r.sort_txt limit ?;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Aug 10 05 1 5s761ms 5s761ms 08 2 14s53ms 7s26ms 09 7 1m 8s689ms 10 4 1m28s 22s216ms 11 1 5s495ms 5s495ms 15 1 1m9s 1m9s Aug 11 07 1 34s987ms 34s987ms 08 3 3m33s 1m11s 17 1 1m10s 1m10s 23 1 56s966ms 56s966ms Aug 12 12 1 50s340ms 50s340ms 15 1 31s223ms 31s223ms 18 1 6s857ms 6s857ms 20 1 41s549ms 41s549ms Aug 13 01 1 1m19s 1m19s 03 1 48s531ms 48s531ms 04 1 6s102ms 6s102ms 07 2 10s910ms 5s455ms 08 2 10s667ms 5s333ms 09 3 1m13s 24s474ms 10 6 1m50s 18s356ms 11 9 51s841ms 5s760ms 12 5 3m25s 41s116ms 13 7 38s689ms 5s527ms 14 3 53s818ms 17s939ms 15 1 5s78ms 5s78ms 16 3 15s825ms 5s275ms 17 15 3m11s 12s788ms 18 5 30s558ms 6s111ms 19 2 10s316ms 5s158ms 21 11 58s971ms 5s361ms 22 3 16s67ms 5s355ms 23 98 37m37s 23s34ms Aug 14 00 84 19m56s 14s249ms 01 9 51s631ms 5s736ms 02 4 52s937ms 13s234ms 03 4 23s712ms 5s928ms 04 4 1m10s 17s600ms 05 13 1m16s 5s871ms 06 12 1m4s 5s359ms 08 1 5s897ms 5s897ms 09 5 29s304ms 5s860ms 11 8 2m54s 21s837ms 16 44 6m9s 8s402ms 19 1 5s11ms 5s11ms 22 6 32s924ms 5s487ms 23 4 22s779ms 5s694ms Aug 15 00 7 1m9s 9s983ms 05 104 27m17s 15s742ms 06 234 1h9m9s 17s731ms 07 76 24m4s 19s10ms 08 122 23m49s 11s720ms 09 3 18s75ms 6s25ms [ User: pubeu - Total duration: 1h31m19s - Times executed: 354 ]
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2101536')) ORDER BY r.sort_txt LIMIT 50;
Date: 2025-08-13 23:33:27 Duration: 5m51s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2105591')) ORDER BY r.sort_txt LIMIT 50;
Date: 2025-08-13 23:33:18 Duration: 5m49s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2105591')) ORDER BY r.sort_txt LIMIT 50;
Date: 2025-08-13 23:33:21 Duration: 5m41s Database: ctdprd51 User: pubeu Bind query: yes
7 685 8h23m23s 5s12ms 3m36s 44s92ms select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ?;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Aug 10 00 3 31s357ms 10s452ms 01 9 2m41s 17s977ms 02 4 1m23s 20s907ms 03 1 25s245ms 25s245ms 04 8 2m16s 17s49ms 05 2 32s837ms 16s418ms 06 8 2m16s 17s54ms 07 4 1m32s 23s67ms 08 3 1m14s 24s932ms 09 5 1m16s 15s365ms 10 5 59s70ms 11s814ms 11 2 32s119ms 16s59ms 12 4 1m8s 17s70ms 13 2 43s952ms 21s976ms 14 2 31s831ms 15s915ms 16 1 12s466ms 12s466ms 18 2 32s945ms 16s472ms Aug 11 00 1 23s482ms 23s482ms 06 1 25s557ms 25s557ms 07 2 37s219ms 18s609ms 09 1 25s799ms 25s799ms 10 1 18s623ms 18s623ms 11 1 18s564ms 18s564ms 14 1 24s517ms 24s517ms 15 1 24s286ms 24s286ms 20 1 24s557ms 24s557ms Aug 12 00 3 27s215ms 9s71ms 07 1 13s44ms 13s44ms 08 1 5s332ms 5s332ms 09 2 15s105ms 7s552ms 12 5 1m24s 16s871ms 13 2 45s224ms 22s612ms 14 4 1m19s 19s965ms 15 3 1m6s 22s143ms 16 2 47s780ms 23s890ms 17 2 18s983ms 9s491ms 18 9 3m18s 22s62ms 19 6 1m57s 19s662ms 20 2 47s317ms 23s658ms 21 10 2m54s 17s462ms 22 4 39s611ms 9s902ms 23 7 2m10s 18s670ms Aug 13 00 2 40s214ms 20s107ms 01 3 1m1s 20s630ms 02 4 41s307ms 10s326ms 03 2 19s796ms 9s898ms 04 4 1m3s 15s986ms 05 1 11s836ms 11s836ms 06 3 40s925ms 13s641ms 07 4 1m5s 16s418ms 08 6 2m18s 23s152ms 09 3 35s513ms 11s837ms 10 3 49s269ms 16s423ms 11 6 1m43s 17s220ms 12 4 1m26s 21s502ms 13 4 55s41ms 13s760ms 14 1 16s427ms 16s427ms 15 3 30s830ms 10s276ms 16 2 30s534ms 15s267ms 17 5 1m48s 21s799ms 18 4 1m3s 15s977ms 19 7 2m6s 18s18ms 20 4 1m 15s15ms 21 8 1m56s 14s539ms 22 3 46s229ms 15s409ms 23 20 9m52s 29s634ms Aug 14 00 92 53m7s 34s646ms 01 1 16s844ms 16s844ms 02 2 47s3ms 23s501ms 03 2 49s219ms 24s609ms 04 2 40s918ms 20s459ms 05 7 2m14s 19s201ms 06 2 47s978ms 23s989ms 07 1 27s602ms 27s602ms 08 4 1m33s 23s334ms 09 8 2m 15s37ms 10 1 25s362ms 25s362ms 11 7 1m52s 16s113ms 13 1 7s314ms 7s314ms 15 12 3m29s 17s475ms 16 23 22m56s 59s849ms 18 1 9s259ms 9s259ms 23 1 8s459ms 8s459ms Aug 15 05 38 58m33s 1m32s 06 85 2h24m40s 1m42s 07 30 54m14s 1m48s 08 75 1h8m13s 54s573ms 09 5 1m7s 13s492ms 10 14 3m19s 14s259ms 11 7 1m50s 15s735ms 12 11 2m45s 15s30ms 13 7 1m37s 13s983ms 14 1 23s6ms 23s6ms 15 1 11s446ms 11s446ms [ User: pubeu - Total duration: 2h21m31s - Times executed: 371 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1239590') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-08-15 07:06:21 Duration: 3m36s Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1239590') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-08-15 06:47:05 Duration: 3m30s Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1239590') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-08-15 06:48:55 Duration: 3m27s Bind query: yes
8 521 1h34m50s 5s1ms 50s854ms 10s922ms select e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, ( select string_agg(distinct stressorterm.nm || ? || ( select cd from object_type where id = stressorterm.object_type_id) || ? || stressorterm.nm_html || ? || stressorterm.acc_txt || ? || stressorterm.acc_db_cd, ?)) as stressoragents, ( select string_agg(distinct coalesce(receptorterm.nm, ?) || ? || coalesce(( select cd from object_type where id = receptorterm.object_type_id), ?) || ? || coalesce(receptorterm.nm_html, ?) || ? || coalesce(receptorterm.acc_txt, ?) || ? || coalesce(receptorterm.acc_db_cd, ?) || ? || receptor.description, ?)) as receptors, ( select string_agg(distinct country.nm, ?)) as studycountries, ( select string_agg(distinct location.locality_txt, ?)) as localities, ( select string_agg(distinct event.medium_nm || ? || coalesce(event.medium_term_acc_txt, ?), ?)) as assaymediums, ( select string_agg(distinct exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd, ?)) as assayedmarkers, ( select string_agg(distinct diseaseterm.nm || ? || ( select cd from object_type where id = diseaseterm.object_type_id) || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd, ?)) as diseases, ( select string_agg(distinct phenotypeterm.nm || ? || ( select cd from object_type where id = phenotypeterm.object_type_id) || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd, ?)) as phenotypes, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, re.author_summary summary, count(*) over () fullrowcount from exposure e inner join reference r on e.reference_id = r.id inner join exp_stressor stressor on e.exp_stressor_id = stressor.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join term receptorterm on receptor.term_id = receptorterm.id left outer join exp_event event on e.exp_event_id = event.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join exp_event_location location on e.exp_event_id = location.exp_event_id left outer join country on location.country_id = country.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id inner join reference_exp re on e.reference_id = re.reference_id left outer join exp_study_factor expstudyfactor on re.id = expstudyfactor.reference_exp_id where e.reference_id = any (array ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like ?) and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressoragents limit ?;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Aug 10 00 1 5s62ms 5s62ms 05 4 28s210ms 7s52ms 07 2 12s786ms 6s393ms 08 8 1m9s 8s683ms 09 19 3m5s 9s746ms 10 4 23s497ms 5s874ms 11 3 18s324ms 6s108ms Aug 11 02 1 5s716ms 5s716ms 06 2 11s77ms 5s538ms Aug 12 02 3 24s509ms 8s169ms 10 1 6s743ms 6s743ms 11 1 5s59ms 5s59ms 13 3 19s197ms 6s399ms 14 1 5s638ms 5s638ms 15 1 5s68ms 5s68ms 18 8 50s377ms 6s297ms 20 2 10s275ms 5s137ms 21 7 38s623ms 5s517ms 22 4 22s855ms 5s713ms 23 1 5s776ms 5s776ms Aug 13 02 2 10s217ms 5s108ms 03 1 8s96ms 8s96ms 04 2 11s334ms 5s667ms 05 1 5s391ms 5s391ms 06 4 21s584ms 5s396ms 07 2 12s300ms 6s150ms 08 6 40s844ms 6s807ms 09 2 13s580ms 6s790ms 11 3 22s346ms 7s448ms 12 4 21s787ms 5s446ms 13 2 11s103ms 5s551ms 14 5 30s974ms 6s194ms 15 8 44s997ms 5s624ms 16 2 10s396ms 5s198ms 17 4 24s386ms 6s96ms 18 3 15s891ms 5s297ms 19 6 34s648ms 5s774ms 20 5 25s968ms 5s193ms 21 6 33s909ms 5s651ms 22 6 34s82ms 5s680ms 23 21 4m59s 14s277ms Aug 14 00 16 2m13s 8s314ms 01 2 14s578ms 7s289ms 02 3 19s80ms 6s360ms 03 4 21s94ms 5s273ms 04 2 10s21ms 5s10ms 05 6 37s848ms 6s308ms 06 4 21s292ms 5s323ms 07 1 5s180ms 5s180ms 08 5 27s903ms 5s580ms 09 13 1m31s 7s50ms 11 1 5s225ms 5s225ms 12 1 5s29ms 5s29ms 15 1 5s101ms 5s101ms 16 4 31s575ms 7s893ms 19 2 10s836ms 5s418ms 20 2 11s373ms 5s686ms 21 1 5s643ms 5s643ms Aug 15 05 69 13m15s 11s532ms 06 95 25m33s 16s144ms 07 36 10m3s 16s774ms 08 80 16m40s 12s511ms 09 2 12s821ms 6s410ms [ User: pubeu - Total duration: 27m1s - Times executed: 237 ]
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-08-15 06:46:20 Duration: 50s854ms Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-08-15 06:55:39 Duration: 48s997ms Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-08-15 06:33:08 Duration: 45s275ms Bind query: yes
9 491 1h44s 5s9ms 43s920ms 7s423ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Aug 10 00 3 18s765ms 6s255ms 01 12 1m15s 6s304ms 02 3 18s669ms 6s223ms 03 3 18s799ms 6s266ms 04 1 6s384ms 6s384ms 05 3 17s422ms 5s807ms 06 6 36s234ms 6s39ms 07 7 44s357ms 6s336ms 08 5 33s943ms 6s788ms 09 4 27s536ms 6s884ms 10 1 6s633ms 6s633ms 11 2 11s829ms 5s914ms 12 3 17s188ms 5s729ms 13 2 12s39ms 6s19ms 16 1 5s114ms 5s114ms 17 4 23s775ms 5s943ms 18 1 6s816ms 6s816ms 19 1 5s458ms 5s458ms 20 3 16s85ms 5s361ms 21 4 20s608ms 5s152ms 22 1 5s454ms 5s454ms Aug 11 01 1 5s272ms 5s272ms 03 1 6s928ms 6s928ms 04 1 5s136ms 5s136ms 06 5 28s371ms 5s674ms 07 7 41s713ms 5s959ms 10 9 51s216ms 5s690ms 12 4 23s588ms 5s897ms 13 8 47s912ms 5s989ms 14 3 18s775ms 6s258ms 15 2 12s752ms 6s376ms 19 2 11s951ms 5s975ms 21 1 5s742ms 5s742ms 22 1 6s37ms 6s37ms 23 1 6s77ms 6s77ms Aug 12 00 5 31s286ms 6s257ms 01 1 6s490ms 6s490ms 02 4 27s116ms 6s779ms 03 2 12s262ms 6s131ms 05 2 12s54ms 6s27ms 07 2 12s425ms 6s212ms 08 1 5s535ms 5s535ms 09 1 5s686ms 5s686ms 10 1 5s632ms 5s632ms 11 3 18s50ms 6s16ms 12 3 19s70ms 6s356ms 13 3 16s497ms 5s499ms 14 3 17s922ms 5s974ms 15 3 19s236ms 6s412ms 16 5 32s183ms 6s436ms 17 2 12s584ms 6s292ms 18 4 25s4ms 6s251ms 19 8 51s152ms 6s394ms 20 5 31s546ms 6s309ms 21 5 32s734ms 6s546ms 22 4 26s293ms 6s573ms 23 12 1m15s 6s268ms Aug 13 00 2 13s501ms 6s750ms 01 4 25s130ms 6s282ms 02 4 25s142ms 6s285ms 03 6 38s268ms 6s378ms 04 10 1m6s 6s686ms 06 6 38s51ms 6s341ms 07 3 17s132ms 5s710ms 08 6 39s961ms 6s660ms 09 9 57s786ms 6s420ms 10 8 54s323ms 6s790ms 11 9 57s231ms 6s359ms 12 6 42s23ms 7s3ms 13 5 30s796ms 6s159ms 14 5 32s766ms 6s553ms 15 8 55s473ms 6s934ms 16 2 14s550ms 7s275ms 17 4 28s756ms 7s189ms 18 6 41s232ms 6s872ms 19 2 12s65ms 6s32ms 20 5 34s67ms 6s813ms 21 2 13s450ms 6s725ms 22 2 13s925ms 6s962ms 23 20 4m 12s5ms Aug 14 00 5 34s138ms 6s827ms 01 4 28s366ms 7s91ms 02 6 43s709ms 7s284ms 03 9 1m 6s677ms 04 4 28s897ms 7s224ms 05 7 46s889ms 6s698ms 06 6 38s860ms 6s476ms 07 6 40s297ms 6s716ms 08 6 40s846ms 6s807ms 09 6 40s58ms 6s676ms 10 7 44s628ms 6s375ms 11 6 41s824ms 6s970ms 12 2 13s51ms 6s525ms 13 6 38s721ms 6s453ms 14 1 6s351ms 6s351ms 15 4 27s134ms 6s783ms 16 13 2m29s 11s524ms 19 13 1m23s 6s456ms 20 21 2m18s 6s572ms 21 1 6s502ms 6s502ms 22 9 1m5s 7s250ms 23 4 24s982ms 6s245ms Aug 15 05 3 1m14s 24s948ms 06 7 4m17s 36s799ms 07 1 40s963ms 40s963ms 08 2 23s695ms 11s847ms 12 1 5s684ms 5s684ms Aug 16 14 1 5s578ms 5s578ms 18 1 5s202ms 5s202ms [ User: pubeu - Total duration: 48m40s - Times executed: 435 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1435886' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-08-15 06:55:17 Duration: 43s920ms Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1435886' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-08-15 06:55:06 Duration: 43s691ms Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1330887' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-08-15 07:08:51 Duration: 40s963ms Bind query: yes
10 478 3d1h4m42s 5s2ms 53m2s 9m10s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Aug 10 00 2 9m23s 4m41s 01 6 17m20s 2m53s 02 5 37m22s 7m28s 03 2 14m51s 7m25s 04 6 23m35s 3m55s 05 2 8m15s 4m7s 06 1 3m5s 3m5s 07 4 23m33s 5m53s 08 1 3m35s 3m35s 09 6 24m29s 4m4s 10 3 13m7s 4m22s 11 5 26m21s 5m16s 12 4 22m52s 5m43s 13 1 5m18s 5m18s 14 1 5m6s 5m6s 15 2 7m7s 3m33s 16 2 5m13s 2m36s 17 1 4m17s 4m17s Aug 11 00 1 3m40s 3m40s 03 2 9m19s 4m39s 06 3 9m28s 3m9s 07 2 15m9s 7m34s 12 1 4m12s 4m12s 13 1 3m31s 3m31s 15 3 31m33s 10m31s 18 1 5m29s 5m29s 21 1 10m3s 10m3s 22 5 25m47s 5m9s Aug 12 02 1 3m27s 3m27s 07 1 3m56s 3m56s 10 1 6m8s 6m8s 11 1 5m8s 5m8s 12 3 13m13s 4m24s 13 2 9m24s 4m42s 14 1 3m19s 3m19s 15 5 13m20s 2m40s 16 4 23m20s 5m50s 17 3 11m26s 3m48s 18 8 40m27s 5m3s 19 1 6m31s 6m31s 20 5 31m23s 6m16s 21 3 12m44s 4m14s 22 6 47m7s 7m51s 23 1 3m39s 3m39s Aug 13 00 4 12m34s 3m8s 02 5 16m20s 3m16s 03 6 24m16s 4m2s 04 4 31m30s 7m52s 06 3 14m30s 4m50s 07 8 28m50s 3m36s 08 4 20m28s 5m7s 09 7 31m44s 4m32s 10 2 7m39s 3m49s 11 2 3m37s 1m48s 12 2 10m45s 5m22s 13 3 8m41s 2m53s 14 6 23m49s 3m58s 15 2 6m13s 3m6s 16 6 21m15s 3m32s 17 4 26m15s 6m33s 18 4 18m17s 4m34s 19 10 52m29s 5m14s 20 4 14m31s 3m37s 21 3 20m9s 6m43s 22 3 20m34s 6m51s 23 12 1h38m4s 8m10s Aug 14 00 61 5h46m32s 5m40s 01 4 12m58s 3m14s 02 8 28m54s 3m36s 04 2 7m15s 3m37s 05 1 3m49s 3m49s 06 1 5m20s 5m20s 07 2 8m57s 4m28s 09 3 25m21s 8m27s 10 2 7m22s 3m41s 11 2 14m26s 7m13s 13 1 3m40s 3m40s 15 8 5m43s 42s975ms 16 28 3h54m59s 8m23s Aug 15 05 7 3m40s 31s528ms 06 32 9h8m6s 17m7s 07 24 14h38m48s 36m37s 08 14 27m57s 1m59s 09 26 11h34m36s 26m42s 10 8 1h58m46s 14m50s 11 7 2h3m5s 17m35s 12 8 1h30m33s 11m19s 13 2 27m19s 13m39s 14 3 45m49s 15m16s [ User: pubeu - Total duration: 1d8h57m21s - Times executed: 306 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-08-15 07:04:28 Duration: 53m2s Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-08-15 07:23:04 Duration: 51m26s Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-08-15 07:18:25 Duration: 51m21s Bind query: yes
11 447 2h36m36s 5s8ms 2m28s 21s21ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where phenotypeterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and associatedterm.object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Aug 10 00 6 1m15s 12s649ms 01 2 29s461ms 14s730ms 02 2 24s146ms 12s73ms 03 3 40s730ms 13s576ms 04 4 59s697ms 14s924ms 05 4 40s696ms 10s174ms 06 4 39s599ms 9s899ms 07 3 42s422ms 14s140ms 08 3 52s945ms 17s648ms 09 1 17s953ms 17s953ms 10 7 1m8s 9s733ms 11 4 58s567ms 14s641ms 12 2 29s535ms 14s767ms 13 3 28s946ms 9s648ms 14 1 16s826ms 16s826ms 16 1 5s626ms 5s626ms 20 1 17s474ms 17s474ms 21 1 6s71ms 6s71ms Aug 11 01 1 11s253ms 11s253ms 05 1 5s963ms 5s963ms 13 1 17s495ms 17s495ms 14 3 40s593ms 13s531ms 23 1 17s121ms 17s121ms Aug 12 00 1 17s595ms 17s595ms 04 1 11s575ms 11s575ms 05 1 17s733ms 17s733ms 07 1 17s385ms 17s385ms 08 4 1m3s 15s788ms 09 3 35s476ms 11s825ms 10 4 53s501ms 13s375ms 11 1 18s132ms 18s132ms 12 3 36s562ms 12s187ms 13 3 48s492ms 16s164ms 14 8 1m17s 9s727ms 15 4 52s32ms 13s8ms 16 5 1m 12s105ms 17 6 1m21s 13s620ms 18 3 29s673ms 9s891ms 19 2 18s367ms 9s183ms 20 4 42s340ms 10s585ms 21 6 1m7s 11s199ms 22 5 1m1s 12s280ms 23 2 24s703ms 12s351ms Aug 13 00 4 42s155ms 10s538ms 01 5 54s281ms 10s856ms 02 2 23s592ms 11s796ms 03 2 23s883ms 11s941ms 04 6 1m26s 14s386ms 05 1 18s586ms 18s586ms 06 7 2m8s 18s317ms 07 8 1m46s 13s253ms 08 5 1m20s 16s128ms 09 2 36s504ms 18s252ms 10 7 1m52s 16s8ms 11 4 56s822ms 14s205ms 12 3 37s720ms 12s573ms 13 3 43s622ms 14s540ms 14 4 35s430ms 8s857ms 15 3 23s728ms 7s909ms 16 5 41s541ms 8s308ms 17 8 1m34s 11s816ms 18 3 32s558ms 10s852ms 19 4 1m 15s32ms 20 4 34s615ms 8s653ms 21 2 10s302ms 5s151ms 22 4 57s707ms 14s426ms 23 4 1m25s 21s298ms Aug 14 00 38 8m58s 14s158ms 01 3 29s982ms 9s994ms 02 5 1m2s 12s506ms 03 5 1m8s 13s751ms 04 2 35s451ms 17s725ms 05 5 46s970ms 9s394ms 06 4 25s555ms 6s388ms 09 3 43s546ms 14s515ms 12 2 18s562ms 9s281ms 15 5 1m28s 17s654ms 16 23 14m25s 37s625ms 18 1 12s471ms 12s471ms 19 1 11s742ms 11s742ms Aug 15 05 16 11m18s 42s406ms 06 57 40m47s 42s937ms 07 21 12m40s 36s221ms 08 18 9m8s 30s487ms 09 5 1m25s 17s121ms 10 2 34s804ms 17s402ms 11 2 34s536ms 17s268ms 12 3 50s259ms 16s753ms [ User: pubeu - Total duration: 1h8m42s - Times executed: 290 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1239590'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 08:42:14 Duration: 2m28s Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1239590'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 06:45:32 Duration: 2m1s Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1239590'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 06:49:05 Duration: 1m59s Bind query: yes
12 422 1h27m39s 5s34ms 23s367ms 12s463ms with recursive sub_node ( object_id, id, path, lvl ) as ( select n.object_id, n.id, array[n.nm_sort], ? from dag_node n where n.object_id = ? union all select n.object_id, n.id, cast(path || n.nm_sort as varchar(?)[]), sn.lvl + ? from dag_node n inner join sub_node sn on (n.parent_id = sn.id)) select distinct t.nm prinm, t.nm_html prinmhtml, t.secondary_nm secondarynm, t.acc_db_cd accdbcd, t.acc_txt termacc, t.is_leaf isleaf, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_genes hasgenes, sn.lvl, sn.path, max(sn.lvl) over () maxlvl, t.has_phenotypes hasphenotypes from sub_node sn inner join term t on sn.object_id = t.id where sn.lvl <= ? order by sn.path;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Aug 13 23 2 14s591ms 7s295ms Aug 14 00 1 5s459ms 5s459ms Aug 15 05 80 15m52s 11s901ms 06 197 44m38s 13s595ms 07 62 15m4s 14s587ms 08 78 11m34s 8s901ms 09 2 10s444ms 5s222ms [ User: pubeu - Total duration: 4m15s - Times executed: 32 ]
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '663702' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 4 ORDER BY sn.path;
Date: 2025-08-15 07:02:24 Duration: 23s367ms Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '663702' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 4 ORDER BY sn.path;
Date: 2025-08-15 06:47:22 Duration: 22s598ms Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '663702' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 4 ORDER BY sn.path;
Date: 2025-08-15 06:50:11 Duration: 22s186ms Bind query: yes
13 285 36m35s 5s16ms 35s909ms 7s702ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ? offset ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Aug 10 06 1 5s680ms 5s680ms 13 1 5s861ms 5s861ms 18 1 7s209ms 7s209ms Aug 11 05 1 5s541ms 5s541ms 08 2 35s579ms 17s789ms 10 1 8s943ms 8s943ms 23 2 10s736ms 5s368ms Aug 12 00 1 5s474ms 5s474ms 10 1 9s962ms 9s962ms 14 3 15s439ms 5s146ms 16 4 25s216ms 6s304ms 17 3 16s710ms 5s570ms 18 10 1m14s 7s420ms 19 4 21s549ms 5s387ms 21 3 22s70ms 7s356ms 22 4 22s129ms 5s532ms Aug 13 00 3 16s520ms 5s506ms 01 1 5s134ms 5s134ms 03 1 5s97ms 5s97ms 04 2 41s238ms 20s619ms 06 1 14s956ms 14s956ms 07 1 5s104ms 5s104ms 08 5 28s155ms 5s631ms 10 3 16s735ms 5s578ms 11 1 5s958ms 5s958ms 12 1 5s190ms 5s190ms 13 10 56s926ms 5s692ms 15 3 17s552ms 5s850ms 16 2 13s344ms 6s672ms 18 4 24s774ms 6s193ms 19 6 36s71ms 6s11ms 20 4 22s88ms 5s522ms 21 1 5s464ms 5s464ms 22 3 27s696ms 9s232ms 23 13 1m32s 7s144ms Aug 14 00 14 1m34s 6s776ms 02 2 10s480ms 5s240ms 03 1 5s16ms 5s16ms 04 8 45s975ms 5s746ms 05 28 3m34s 7s643ms 07 2 12s290ms 6s145ms 08 1 5s119ms 5s119ms 09 1 10s970ms 10s970ms 10 1 11s682ms 11s682ms 12 1 5s100ms 5s100ms 13 2 10s186ms 5s93ms 14 3 15s554ms 5s184ms 15 3 18s391ms 6s130ms 16 7 1m4s 9s229ms 17 3 22s970ms 7s656ms 18 1 7s851ms 7s851ms 19 5 27s930ms 5s586ms 20 6 36s669ms 6s111ms 21 3 16s623ms 5s541ms 22 12 1m38s 8s190ms 23 35 3m17s 5s656ms Aug 15 00 2 38s340ms 19s170ms 05 2 37s66ms 18s533ms 06 21 4m33s 13s28ms 07 3 27s710ms 9s236ms 08 11 2m32s 13s869ms [ User: pubeu - Total duration: 25m33s - Times executed: 223 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2112418') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 3969900;
Date: 2025-08-13 04:54:55 Duration: 35s909ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2101651') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 4665100;
Date: 2025-08-14 05:58:09 Duration: 33s232ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2112418') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 3969900;
Date: 2025-08-15 00:18:31 Duration: 33s31ms Database: ctdprd51 User: pubeu Bind query: yes
14 260 1h 5s6ms 52s592ms 13s848ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.ixn_id = any (array (( select ixn_id from ixn_anatomy where anatomy_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?)))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Aug 10 08 1 7s837ms 7s837ms Aug 12 13 1 7s630ms 7s630ms 18 1 7s625ms 7s625ms 19 1 7s988ms 7s988ms Aug 13 00 1 8s186ms 8s186ms 02 1 8s175ms 8s175ms 04 1 7s908ms 7s908ms 05 1 8s17ms 8s17ms 09 1 8s681ms 8s681ms 11 1 7s811ms 7s811ms 18 1 7s635ms 7s635ms 23 2 32s631ms 16s315ms Aug 14 00 2 12s817ms 6s408ms 04 1 7s729ms 7s729ms Aug 15 05 58 16m10s 16s738ms 06 116 26m42s 13s812ms 07 30 6m14s 12s490ms 08 31 7m23s 14s320ms 09 5 38s189ms 7s637ms 10 1 7s469ms 7s469ms 13 1 7s572ms 7s572ms 14 2 15s6ms 7s503ms [ User: pubeu - Total duration: 5m6s - Times executed: 33 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.ixn_id = ANY (ARRAY (( select ixn_id from ixn_anatomy where anatomy_id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2117193')))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 06:44:50 Duration: 52s592ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.ixn_id = ANY (ARRAY (( select ixn_id from ixn_anatomy where anatomy_id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2117193')))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 06:43:56 Duration: 51s491ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.ixn_id = ANY (ARRAY (( select ixn_id from ixn_anatomy where anatomy_id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2117193')))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 07:02:49 Duration: 51s391ms Bind query: yes
15 224 37m44s 5s7ms 31s325ms 10s109ms select * from ( select g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, count(*) over () fullrowcount from term g where g.id in ( select gt.gene_id from dag_path dp inner join gene_taxon gt on dp.descendant_object_id = gt.taxon_id where dp.ancestor_object_id = ? union all select gcr.gene_id from dag_path dp inner join gene_chem_reference gcr on dp.descendant_object_id = gcr.taxon_id where dp.ancestor_object_id = ?) offset ?) mq order by mq.genesymbolsort limit ? offset ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Aug 12 22 1 6s417ms 6s417ms Aug 13 03 2 10s565ms 5s282ms 06 1 5s465ms 5s465ms 07 1 5s102ms 5s102ms 08 1 5s69ms 5s69ms 09 2 13s48ms 6s524ms 10 7 41s402ms 5s914ms 13 1 5s7ms 5s7ms 14 1 5s121ms 5s121ms 15 3 23s76ms 7s692ms 18 1 5s62ms 5s62ms 19 2 10s103ms 5s51ms 20 1 5s446ms 5s446ms 23 4 1m30s 22s536ms Aug 14 00 18 2m47s 9s280ms 01 2 15s600ms 7s800ms 04 2 11s39ms 5s519ms 05 2 13s485ms 6s742ms 06 1 5s537ms 5s537ms 10 1 5s473ms 5s473ms 11 1 5s43ms 5s43ms 13 1 8s18ms 8s18ms 16 37 4m23s 7s129ms 20 1 5s144ms 5s144ms 22 6 41s73ms 6s845ms 23 2 10s996ms 5s498ms Aug 15 05 26 4m16s 9s879ms 06 60 12m59s 12s992ms 07 30 6m35s 13s173ms 08 6 49s605ms 8s267ms [ User: pubeu - Total duration: 10m25s - Times executed: 85 ]
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '663702' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '663702') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50 OFFSET 500;
Date: 2025-08-13 23:28:47 Duration: 31s325ms Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '663702' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '663702') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50 OFFSET 450;
Date: 2025-08-13 23:28:25 Duration: 29s1ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '663702' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '663702') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50 OFFSET 550;
Date: 2025-08-13 23:28:09 Duration: 24s92ms Database: ctdprd51 User: pubeu Bind query: yes
16 214 34m7s 5s5ms 20s369ms 9s568ms select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where diseaseterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Aug 10 09 1 5s5ms 5s5ms Aug 13 23 5 37s320ms 7s464ms Aug 15 05 35 6m2s 10s345ms 06 98 16m 9s797ms 07 37 5m59s 9s727ms 08 38 5m23s 8s502ms [ User: pubeu - Total duration: 3m3s - Times executed: 17 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2100341') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-08-15 07:04:45 Duration: 20s369ms Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2103600') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-08-15 08:37:53 Duration: 20s73ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2100341') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-08-15 07:06:11 Duration: 19s747ms Bind query: yes
17 203 26m30s 5s26ms 17s50ms 7s836ms select c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposurereferencecount, case when cd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from chem_disease_axn a where a.chem_id = cd.chem_id and a.disease_id = cd.disease_id) else null end actiontypes from chem_disease cd inner join term c on cd.chem_id = c.id inner join term d on cd.disease_id = d.id where cd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, cd.network_score desc nulls last, d.nm_sort, c.nm_sort limit ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Aug 13 23 5 39s801ms 7s960ms Aug 15 05 35 4m26s 7s603ms 06 104 13m51s 7s993ms 07 34 4m46s 8s421ms 08 25 2m47s 6s694ms [ User: pubeu - Total duration: 1m10s - Times executed: 8 ]
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2025-08-15 06:50:50 Duration: 17s50ms Bind query: yes
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2025-08-15 06:38:32 Duration: 13s933ms Bind query: yes
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2105591') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2025-08-15 07:21:48 Duration: 13s578ms Bind query: yes
18 156 16m23s 5s11ms 13s477ms 6s302ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where stressorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or exposuremarkerterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Aug 10 05 1 12s355ms 12s355ms 08 1 5s177ms 5s177ms 20 1 12s73ms 12s73ms 21 3 36s14ms 12s4ms Aug 11 03 1 8s570ms 8s570ms Aug 12 02 2 24s822ms 12s411ms 04 1 12s12ms 12s12ms 18 2 17s509ms 8s754ms 22 1 13s477ms 13s477ms Aug 13 08 2 10s422ms 5s211ms 22 1 5s962ms 5s962ms 23 1 5s319ms 5s319ms Aug 14 00 2 13s629ms 6s814ms 07 1 6s604ms 6s604ms Aug 15 05 17 1m29s 5s240ms 06 78 7m41s 5s919ms 07 33 3m20s 6s74ms 08 8 48s27ms 6s3ms [ User: pubeu - Total duration: 3m8s - Times executed: 20 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where stressorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') or exposureMarkerTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-08-12 22:02:39 Duration: 13s477ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where stressorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') or exposureMarkerTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-08-12 02:29:40 Duration: 12s835ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where stressorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') or exposureMarkerTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-08-10 05:51:51 Duration: 12s355ms Database: ctdprd51 User: pubeu Bind query: yes
19 155 19m29s 6s858ms 20s534ms 7s547ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?)) and ptr.term_object_type_id = ? and ptr.phenotype_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and taxonterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = ? and action_degree_type_nm in (...)) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Aug 10 00 1 7s537ms 7s537ms 01 1 7s464ms 7s464ms 02 1 7s251ms 7s251ms 03 1 7s232ms 7s232ms 04 1 7s385ms 7s385ms 05 3 21s717ms 7s239ms 06 1 7s32ms 7s32ms 07 1 7s117ms 7s117ms 08 1 7s463ms 7s463ms 09 1 7s392ms 7s392ms 10 1 7s279ms 7s279ms 11 1 7s116ms 7s116ms 12 1 7s202ms 7s202ms 13 1 7s289ms 7s289ms 14 1 7s319ms 7s319ms 15 1 7s2ms 7s2ms 16 1 6s866ms 6s866ms 17 1 6s976ms 6s976ms 18 1 7s189ms 7s189ms 19 1 7s108ms 7s108ms 20 1 7s174ms 7s174ms 21 1 6s935ms 6s935ms 22 1 6s970ms 6s970ms 23 1 7s810ms 7s810ms Aug 11 00 1 7s305ms 7s305ms 01 1 7s1ms 7s1ms 02 1 7s300ms 7s300ms 03 1 7s79ms 7s79ms 04 1 7s15ms 7s15ms 05 3 21s843ms 7s281ms 06 1 7s84ms 7s84ms 07 1 7s334ms 7s334ms 08 1 7s123ms 7s123ms 09 2 14s338ms 7s169ms 10 1 7s104ms 7s104ms 11 1 7s228ms 7s228ms 12 1 7s345ms 7s345ms 13 1 7s73ms 7s73ms 14 1 7s26ms 7s26ms 15 1 7s255ms 7s255ms 16 1 7s115ms 7s115ms 17 1 7s212ms 7s212ms 18 1 7s125ms 7s125ms 19 1 7s170ms 7s170ms 20 1 7s126ms 7s126ms 21 1 7s326ms 7s326ms 22 1 7s102ms 7s102ms 23 1 7s172ms 7s172ms Aug 12 00 1 7s353ms 7s353ms 01 1 7s236ms 7s236ms 02 1 7s193ms 7s193ms 03 1 7s209ms 7s209ms 04 1 7s201ms 7s201ms 05 3 22s87ms 7s362ms 06 1 7s235ms 7s235ms 07 1 7s459ms 7s459ms 08 1 7s87ms 7s87ms 09 1 7s488ms 7s488ms 10 1 7s347ms 7s347ms 11 1 6s947ms 6s947ms 12 1 7s208ms 7s208ms 13 1 7s476ms 7s476ms 14 1 6s935ms 6s935ms 15 1 7s183ms 7s183ms 16 1 7s141ms 7s141ms 17 1 7s257ms 7s257ms 18 1 7s577ms 7s577ms 19 1 7s335ms 7s335ms 20 1 7s295ms 7s295ms 21 1 7s267ms 7s267ms 23 1 7s3ms 7s3ms Aug 13 00 1 7s585ms 7s585ms 01 1 7s79ms 7s79ms 02 1 7s174ms 7s174ms 03 1 7s583ms 7s583ms 04 1 7s312ms 7s312ms 05 3 23s113ms 7s704ms 06 1 7s284ms 7s284ms 07 1 7s295ms 7s295ms 08 1 8s205ms 8s205ms 09 1 7s935ms 7s935ms 10 1 7s698ms 7s698ms 11 1 7s699ms 7s699ms 12 1 7s603ms 7s603ms 13 1 7s425ms 7s425ms 14 1 7s260ms 7s260ms 15 1 7s993ms 7s993ms 16 1 7s146ms 7s146ms 17 1 7s489ms 7s489ms 18 1 7s318ms 7s318ms 19 1 7s177ms 7s177ms 20 1 7s592ms 7s592ms 21 1 7s294ms 7s294ms 22 1 7s331ms 7s331ms 23 1 7s289ms 7s289ms Aug 14 00 1 9s164ms 9s164ms 02 1 8s524ms 8s524ms 03 1 7s93ms 7s93ms 04 1 9s14ms 9s14ms 05 3 26s638ms 8s879ms 06 1 7s150ms 7s150ms 07 1 7s474ms 7s474ms 08 1 7s330ms 7s330ms 09 1 7s561ms 7s561ms 10 1 7s177ms 7s177ms 11 1 7s154ms 7s154ms 12 1 7s174ms 7s174ms 13 1 7s199ms 7s199ms 14 1 7s747ms 7s747ms 15 1 6s933ms 6s933ms 16 1 9s695ms 9s695ms 17 1 7s344ms 7s344ms 18 1 7s234ms 7s234ms 19 1 7s265ms 7s265ms 20 1 8s153ms 8s153ms 21 1 7s658ms 7s658ms 22 1 8s729ms 8s729ms 23 1 7s190ms 7s190ms Aug 15 00 1 7s610ms 7s610ms 05 4 48s717ms 12s179ms 06 1 10s841ms 10s841ms Aug 16 05 2 20s365ms 10s182ms 06 1 7s32ms 7s32ms 07 1 7s132ms 7s132ms 08 1 7s212ms 7s212ms 09 1 6s950ms 6s950ms 10 1 7s131ms 7s131ms 11 1 7s136ms 7s136ms 12 1 6s962ms 6s962ms 13 1 7s62ms 7s62ms 14 1 7s243ms 7s243ms 15 1 7s225ms 7s225ms 16 1 7s218ms 7s218ms 17 1 6s858ms 6s858ms 18 1 7s149ms 7s149ms 19 1 7s102ms 7s102ms 20 1 7s183ms 7s183ms 21 1 7s12ms 7s12ms 22 1 6s907ms 6s907ms 23 1 7s158ms 7s158ms [ User: pubeu - Total duration: 15m58s - Times executed: 130 ]
[ User: qaeu - Total duration: 49s987ms - Times executed: 6 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9606' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 05:48:03 Duration: 20s534ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9606' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-16 05:44:08 Duration: 13s41ms Database: ctdprd51 User: qaeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9606' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-14 05:49:21 Duration: 11s559ms Database: ctdprd51 User: pubeu Bind query: yes
20 149 18m52s 5s768ms 20s605ms 7s598ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?)) and ptr.term_object_type_id = ? and ptr.phenotype_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?))) and taxonterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = ? and action_degree_type_nm in (...)) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Aug 10 00 1 7s405ms 7s405ms 01 1 7s334ms 7s334ms 02 1 7s269ms 7s269ms 03 1 7s256ms 7s256ms 04 1 7s253ms 7s253ms 05 3 21s960ms 7s320ms 06 1 6s926ms 6s926ms 08 1 7s356ms 7s356ms 09 1 7s265ms 7s265ms 10 1 7s338ms 7s338ms 11 1 7s264ms 7s264ms 12 1 6s875ms 6s875ms 13 1 7s239ms 7s239ms 14 1 7s159ms 7s159ms 15 1 7s274ms 7s274ms 16 1 7s26ms 7s26ms 17 1 7s42ms 7s42ms 18 1 7s314ms 7s314ms 19 1 6s937ms 6s937ms 20 1 7s299ms 7s299ms 21 1 6s984ms 6s984ms 22 1 7s153ms 7s153ms 23 1 8s81ms 8s81ms Aug 11 00 1 7s111ms 7s111ms 01 1 7s23ms 7s23ms 02 1 7s516ms 7s516ms 03 1 7s128ms 7s128ms 04 1 7s106ms 7s106ms 05 2 14s316ms 7s158ms 06 1 7s51ms 7s51ms 07 1 7s71ms 7s71ms 08 1 7s185ms 7s185ms 09 2 14s479ms 7s239ms 10 1 7s179ms 7s179ms 11 1 7s483ms 7s483ms 12 1 7s92ms 7s92ms 13 1 7s171ms 7s171ms 14 1 7s106ms 7s106ms 15 1 7s169ms 7s169ms 16 1 7s103ms 7s103ms 17 1 7s170ms 7s170ms 18 1 7s201ms 7s201ms 19 1 7s453ms 7s453ms 20 1 7s292ms 7s292ms 21 1 7s218ms 7s218ms 22 1 7s181ms 7s181ms 23 1 7s274ms 7s274ms Aug 12 00 1 7s243ms 7s243ms 01 1 7s470ms 7s470ms 02 1 7s440ms 7s440ms 03 1 7s42ms 7s42ms 04 1 7s343ms 7s343ms 05 3 21s697ms 7s232ms 06 1 7s247ms 7s247ms 07 1 7s336ms 7s336ms 08 1 7s228ms 7s228ms 09 1 7s310ms 7s310ms 10 1 7s73ms 7s73ms 11 1 6s908ms 6s908ms 12 1 7s419ms 7s419ms 13 1 7s165ms 7s165ms 14 1 7s102ms 7s102ms 15 1 7s300ms 7s300ms 16 1 7s608ms 7s608ms 17 1 7s361ms 7s361ms 18 1 8s88ms 8s88ms 19 1 7s76ms 7s76ms 20 1 7s559ms 7s559ms 21 1 7s251ms 7s251ms 23 1 6s908ms 6s908ms Aug 13 00 1 8s711ms 8s711ms 01 1 7s781ms 7s781ms 02 1 7s515ms 7s515ms 03 1 7s455ms 7s455ms 04 1 7s714ms 7s714ms 05 3 22s184ms 7s394ms 06 1 7s96ms 7s96ms 07 1 7s312ms 7s312ms 08 1 7s419ms 7s419ms 11 1 8s801ms 8s801ms 12 1 7s460ms 7s460ms 13 1 7s408ms 7s408ms 14 1 8s417ms 8s417ms 15 1 7s994ms 7s994ms 16 1 7s479ms 7s479ms 17 1 7s416ms 7s416ms 18 1 7s158ms 7s158ms 19 1 7s119ms 7s119ms 20 1 7s624ms 7s624ms 21 1 9s492ms 9s492ms 22 1 7s78ms 7s78ms 23 1 7s414ms 7s414ms Aug 14 01 1 8s16ms 8s16ms 02 1 7s795ms 7s795ms 03 1 7s240ms 7s240ms 04 1 7s179ms 7s179ms 05 1 7s196ms 7s196ms 06 1 7s204ms 7s204ms 07 1 7s198ms 7s198ms 08 1 7s497ms 7s497ms 09 1 8s443ms 8s443ms 10 1 7s599ms 7s599ms 11 1 7s110ms 7s110ms 12 1 7s398ms 7s398ms 13 1 7s438ms 7s438ms 14 1 7s478ms 7s478ms 15 1 7s90ms 7s90ms 16 1 5s768ms 5s768ms 17 1 7s663ms 7s663ms 18 1 7s94ms 7s94ms 19 1 7s760ms 7s760ms 20 1 7s410ms 7s410ms 21 1 7s306ms 7s306ms 22 1 7s765ms 7s765ms 23 1 7s428ms 7s428ms Aug 15 00 1 7s574ms 7s574ms 05 4 1m8s 17s139ms 06 1 9s544ms 9s544ms Aug 16 05 2 14s310ms 7s155ms 06 1 7s210ms 7s210ms 07 1 6s936ms 6s936ms 08 1 7s89ms 7s89ms 09 1 7s231ms 7s231ms 10 1 7s213ms 7s213ms 11 1 7s147ms 7s147ms 12 1 7s232ms 7s232ms 13 1 7s82ms 7s82ms 14 1 7s176ms 7s176ms 15 1 7s78ms 7s78ms 16 1 6s903ms 6s903ms 17 1 6s827ms 6s827ms 18 1 7s73ms 7s73ms 19 1 7s278ms 7s278ms 20 1 7s215ms 7s215ms 21 1 6s854ms 6s854ms 22 1 7s106ms 7s106ms 23 1 7s102ms 7s102ms [ User: pubeu - Total duration: 8m15s - Times executed: 67 ]
[ User: qaeu - Total duration: 14s337ms - Times executed: 2 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 05:48:01 Duration: 20s605ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 05:49:20 Duration: 20s400ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 05:49:20 Duration: 20s385ms Bind query: yes
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 13m4s 14m3s 13m37s 5 1h8m5s select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id where gcr.gene_id = any (array (( select gi.id gene_id from term gi where gi.object_type_id = ? and upper(gi.nm) like ?) intersect ( select ai.gene_id from dag_path pi inner join gene_go_annot ai on pi.descendant_object_id = ai.go_term_id inner join db_link dbli on dbli.object_id = pi.ancestor_object_id where dbli.acc_txt = ? and dbli.type_cd = ? and dbli.object_type_id = ?) intersect ( select tp.term_id from term_pathway tp where tp.object_type_id = ? and upper(tp.pathway_acc_txt) = ? and tp.pathway_acc_db_cd = ?))) and gcr.chem_id = any (array ( select dp.descendant_object_id from dag_path dp inner join term t on t.id = dp.ancestor_object_id where upper(t.nm) like ? and t.object_type_id = ?)) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?)) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by c.nm_sort, g.nm_sort, i.sort_txt limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Aug 10 17 2 27m14s 13m37s 18 3 40m51s 13m37s [ User: pubeu - Total duration: 55m1s - Times executed: 4 ]
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'ESR1') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'R-HSA-2161541' AND tp.pathway_acc_db_cd = 'REACT'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'TAMOXIFEN' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2025-08-10 18:10:51 Duration: 14m3s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'ESR1') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'R-HSA-2161541' AND tp.pathway_acc_db_cd = 'REACT'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'TAMOXIFEN' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2025-08-10 18:12:02 Duration: 13m44s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'ESR1') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'R-HSA-2161541' AND tp.pathway_acc_db_cd = 'REACT'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'TAMOXIFEN' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2025-08-10 17:47:10 Duration: 13m42s Database: ctdprd51 User: pubeu Bind query: yes
2 9m17s 9m25s 9m22s 4 37m30s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by genenetworkcount desc limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Aug 12 10 4 37m30s 9m22s [ User: pubeu - Total duration: 37m30s - Times executed: 4 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY geneNetworkCount DESC LIMIT 50;
Date: 2025-08-12 10:20:02 Duration: 9m25s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY geneNetworkCount DESC LIMIT 50;
Date: 2025-08-12 10:18:47 Duration: 9m24s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY geneNetworkCount DESC LIMIT 50;
Date: 2025-08-12 10:18:30 Duration: 9m23s Database: ctdprd51 User: pubeu Bind query: yes
3 9m7s 9m36s 9m18s 7 1h5m6s select maint_query_logs_archive ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Aug 10 00 1 9m13s 9m13s Aug 11 00 1 9m7s 9m7s Aug 12 00 1 9m7s 9m7s Aug 13 00 1 9m22s 9m22s Aug 14 00 1 9m36s 9m36s Aug 15 00 1 9m29s 9m29s Aug 16 00 1 9m10s 9m10s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-08-14 00:09:37 Duration: 9m36s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-08-15 00:09:30 Duration: 9m29s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-08-13 00:09:24 Duration: 9m22s
4 5s2ms 53m2s 9m10s 478 3d1h4m42s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Aug 10 00 2 9m23s 4m41s 01 6 17m20s 2m53s 02 5 37m22s 7m28s 03 2 14m51s 7m25s 04 6 23m35s 3m55s 05 2 8m15s 4m7s 06 1 3m5s 3m5s 07 4 23m33s 5m53s 08 1 3m35s 3m35s 09 6 24m29s 4m4s 10 3 13m7s 4m22s 11 5 26m21s 5m16s 12 4 22m52s 5m43s 13 1 5m18s 5m18s 14 1 5m6s 5m6s 15 2 7m7s 3m33s 16 2 5m13s 2m36s 17 1 4m17s 4m17s Aug 11 00 1 3m40s 3m40s 03 2 9m19s 4m39s 06 3 9m28s 3m9s 07 2 15m9s 7m34s 12 1 4m12s 4m12s 13 1 3m31s 3m31s 15 3 31m33s 10m31s 18 1 5m29s 5m29s 21 1 10m3s 10m3s 22 5 25m47s 5m9s Aug 12 02 1 3m27s 3m27s 07 1 3m56s 3m56s 10 1 6m8s 6m8s 11 1 5m8s 5m8s 12 3 13m13s 4m24s 13 2 9m24s 4m42s 14 1 3m19s 3m19s 15 5 13m20s 2m40s 16 4 23m20s 5m50s 17 3 11m26s 3m48s 18 8 40m27s 5m3s 19 1 6m31s 6m31s 20 5 31m23s 6m16s 21 3 12m44s 4m14s 22 6 47m7s 7m51s 23 1 3m39s 3m39s Aug 13 00 4 12m34s 3m8s 02 5 16m20s 3m16s 03 6 24m16s 4m2s 04 4 31m30s 7m52s 06 3 14m30s 4m50s 07 8 28m50s 3m36s 08 4 20m28s 5m7s 09 7 31m44s 4m32s 10 2 7m39s 3m49s 11 2 3m37s 1m48s 12 2 10m45s 5m22s 13 3 8m41s 2m53s 14 6 23m49s 3m58s 15 2 6m13s 3m6s 16 6 21m15s 3m32s 17 4 26m15s 6m33s 18 4 18m17s 4m34s 19 10 52m29s 5m14s 20 4 14m31s 3m37s 21 3 20m9s 6m43s 22 3 20m34s 6m51s 23 12 1h38m4s 8m10s Aug 14 00 61 5h46m32s 5m40s 01 4 12m58s 3m14s 02 8 28m54s 3m36s 04 2 7m15s 3m37s 05 1 3m49s 3m49s 06 1 5m20s 5m20s 07 2 8m57s 4m28s 09 3 25m21s 8m27s 10 2 7m22s 3m41s 11 2 14m26s 7m13s 13 1 3m40s 3m40s 15 8 5m43s 42s975ms 16 28 3h54m59s 8m23s Aug 15 05 7 3m40s 31s528ms 06 32 9h8m6s 17m7s 07 24 14h38m48s 36m37s 08 14 27m57s 1m59s 09 26 11h34m36s 26m42s 10 8 1h58m46s 14m50s 11 7 2h3m5s 17m35s 12 8 1h30m33s 11m19s 13 2 27m19s 13m39s 14 3 45m49s 15m16s [ User: pubeu - Total duration: 1d8h57m21s - Times executed: 306 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-08-15 07:04:28 Duration: 53m2s Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-08-15 07:23:04 Duration: 51m26s Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1281217') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-08-15 07:18:25 Duration: 51m21s Bind query: yes
5 5s12ms 3m36s 44s92ms 685 8h23m23s select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Aug 10 00 3 31s357ms 10s452ms 01 9 2m41s 17s977ms 02 4 1m23s 20s907ms 03 1 25s245ms 25s245ms 04 8 2m16s 17s49ms 05 2 32s837ms 16s418ms 06 8 2m16s 17s54ms 07 4 1m32s 23s67ms 08 3 1m14s 24s932ms 09 5 1m16s 15s365ms 10 5 59s70ms 11s814ms 11 2 32s119ms 16s59ms 12 4 1m8s 17s70ms 13 2 43s952ms 21s976ms 14 2 31s831ms 15s915ms 16 1 12s466ms 12s466ms 18 2 32s945ms 16s472ms Aug 11 00 1 23s482ms 23s482ms 06 1 25s557ms 25s557ms 07 2 37s219ms 18s609ms 09 1 25s799ms 25s799ms 10 1 18s623ms 18s623ms 11 1 18s564ms 18s564ms 14 1 24s517ms 24s517ms 15 1 24s286ms 24s286ms 20 1 24s557ms 24s557ms Aug 12 00 3 27s215ms 9s71ms 07 1 13s44ms 13s44ms 08 1 5s332ms 5s332ms 09 2 15s105ms 7s552ms 12 5 1m24s 16s871ms 13 2 45s224ms 22s612ms 14 4 1m19s 19s965ms 15 3 1m6s 22s143ms 16 2 47s780ms 23s890ms 17 2 18s983ms 9s491ms 18 9 3m18s 22s62ms 19 6 1m57s 19s662ms 20 2 47s317ms 23s658ms 21 10 2m54s 17s462ms 22 4 39s611ms 9s902ms 23 7 2m10s 18s670ms Aug 13 00 2 40s214ms 20s107ms 01 3 1m1s 20s630ms 02 4 41s307ms 10s326ms 03 2 19s796ms 9s898ms 04 4 1m3s 15s986ms 05 1 11s836ms 11s836ms 06 3 40s925ms 13s641ms 07 4 1m5s 16s418ms 08 6 2m18s 23s152ms 09 3 35s513ms 11s837ms 10 3 49s269ms 16s423ms 11 6 1m43s 17s220ms 12 4 1m26s 21s502ms 13 4 55s41ms 13s760ms 14 1 16s427ms 16s427ms 15 3 30s830ms 10s276ms 16 2 30s534ms 15s267ms 17 5 1m48s 21s799ms 18 4 1m3s 15s977ms 19 7 2m6s 18s18ms 20 4 1m 15s15ms 21 8 1m56s 14s539ms 22 3 46s229ms 15s409ms 23 20 9m52s 29s634ms Aug 14 00 92 53m7s 34s646ms 01 1 16s844ms 16s844ms 02 2 47s3ms 23s501ms 03 2 49s219ms 24s609ms 04 2 40s918ms 20s459ms 05 7 2m14s 19s201ms 06 2 47s978ms 23s989ms 07 1 27s602ms 27s602ms 08 4 1m33s 23s334ms 09 8 2m 15s37ms 10 1 25s362ms 25s362ms 11 7 1m52s 16s113ms 13 1 7s314ms 7s314ms 15 12 3m29s 17s475ms 16 23 22m56s 59s849ms 18 1 9s259ms 9s259ms 23 1 8s459ms 8s459ms Aug 15 05 38 58m33s 1m32s 06 85 2h24m40s 1m42s 07 30 54m14s 1m48s 08 75 1h8m13s 54s573ms 09 5 1m7s 13s492ms 10 14 3m19s 14s259ms 11 7 1m50s 15s735ms 12 11 2m45s 15s30ms 13 7 1m37s 13s983ms 14 1 23s6ms 23s6ms 15 1 11s446ms 11s446ms [ User: pubeu - Total duration: 2h21m31s - Times executed: 371 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1239590') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-08-15 07:06:21 Duration: 3m36s Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1239590') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-08-15 06:47:05 Duration: 3m30s Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1239590') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-08-15 06:48:55 Duration: 3m27s Bind query: yes
6 5s 2m3s 21s933ms 1,275 7h46m5s select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Aug 10 00 1 7s362ms 7s362ms 01 3 25s83ms 8s361ms 02 1 5s367ms 5s367ms 03 5 28s950ms 5s790ms 04 1 6s606ms 6s606ms 05 2 14s506ms 7s253ms 06 4 34s832ms 8s708ms 07 2 13s265ms 6s632ms 08 3 16s237ms 5s412ms 09 1 10s238ms 10s238ms 10 1 11s414ms 11s414ms 11 3 23s18ms 7s672ms 12 1 5s414ms 5s414ms 13 1 5s788ms 5s788ms 14 1 6s597ms 6s597ms 19 1 5s456ms 5s456ms Aug 11 01 1 5s858ms 5s858ms 07 2 11s147ms 5s573ms 08 1 5s321ms 5s321ms 13 2 16s313ms 8s156ms 15 1 5s58ms 5s58ms 19 1 5s85ms 5s85ms Aug 12 00 2 12s912ms 6s456ms 02 1 5s860ms 5s860ms 06 2 11s683ms 5s841ms 07 2 12s133ms 6s66ms 09 4 24s311ms 6s77ms 10 2 16s391ms 8s195ms 11 1 6s86ms 6s86ms 12 3 22s100ms 7s366ms 13 5 36s522ms 7s304ms 14 4 26s479ms 6s619ms 15 3 19s834ms 6s611ms 16 2 16s536ms 8s268ms 17 1 6s85ms 6s85ms 18 3 18s686ms 6s228ms 19 2 11s754ms 5s877ms 20 3 16s27ms 5s342ms 21 3 25s113ms 8s371ms 22 6 36s969ms 6s161ms 23 7 59s 8s428ms Aug 13 00 2 12s442ms 6s221ms 01 2 11s390ms 5s695ms 02 3 17s15ms 5s671ms 03 3 24s354ms 8s118ms 04 3 23s558ms 7s852ms 05 2 11s268ms 5s634ms 06 6 44s972ms 7s495ms 07 4 28s189ms 7s47ms 09 2 14s765ms 7s382ms 10 4 29s70ms 7s267ms 11 2 12s180ms 6s90ms 12 3 20s758ms 6s919ms 13 8 1m8s 8s615ms 14 2 13s661ms 6s830ms 15 6 42s590ms 7s98ms 16 3 23s691ms 7s897ms 17 4 36s24ms 9s6ms 18 3 22s767ms 7s589ms 19 2 18s427ms 9s213ms 20 1 12s233ms 12s233ms 21 3 24s173ms 8s57ms 22 5 37s682ms 7s536ms 23 52 15m3s 17s376ms Aug 14 00 6 1m1s 10s288ms 01 4 38s767ms 9s691ms 02 2 10s401ms 5s200ms 03 4 37s84ms 9s271ms 04 4 25s865ms 6s466ms 05 2 11s607ms 5s803ms 06 1 5s76ms 5s76ms 07 2 12s242ms 6s121ms 08 2 11s956ms 5s978ms 09 7 55s404ms 7s914ms 10 4 36s134ms 9s33ms 11 1 5s472ms 5s472ms 12 1 5s488ms 5s488ms 15 1 7s645ms 7s645ms 16 1 14s775ms 14s775ms 22 2 12s113ms 6s56ms Aug 15 00 1 10s799ms 10s799ms 05 170 1h20m21s 28s362ms 06 336 2h53m45s 31s28ms 07 135 1h28m1s 39s122ms 08 285 1h12m29s 15s262ms 09 18 2m34s 8s570ms 10 12 1m35s 7s980ms 11 22 2m30s 6s850ms 12 20 2m9s 6s472ms 13 8 53s805ms 6s725ms 14 4 33s135ms 8s283ms [ User: pubeu - Total duration: 1h11m12s - Times executed: 430 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-08-15 07:05:38 Duration: 2m3s Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-08-15 06:47:30 Duration: 2m3s Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-08-15 07:05:13 Duration: 2m2s Bind query: yes
7 5s8ms 2m28s 21s21ms 447 2h36m36s select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where phenotypeterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and associatedterm.object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Aug 10 00 6 1m15s 12s649ms 01 2 29s461ms 14s730ms 02 2 24s146ms 12s73ms 03 3 40s730ms 13s576ms 04 4 59s697ms 14s924ms 05 4 40s696ms 10s174ms 06 4 39s599ms 9s899ms 07 3 42s422ms 14s140ms 08 3 52s945ms 17s648ms 09 1 17s953ms 17s953ms 10 7 1m8s 9s733ms 11 4 58s567ms 14s641ms 12 2 29s535ms 14s767ms 13 3 28s946ms 9s648ms 14 1 16s826ms 16s826ms 16 1 5s626ms 5s626ms 20 1 17s474ms 17s474ms 21 1 6s71ms 6s71ms Aug 11 01 1 11s253ms 11s253ms 05 1 5s963ms 5s963ms 13 1 17s495ms 17s495ms 14 3 40s593ms 13s531ms 23 1 17s121ms 17s121ms Aug 12 00 1 17s595ms 17s595ms 04 1 11s575ms 11s575ms 05 1 17s733ms 17s733ms 07 1 17s385ms 17s385ms 08 4 1m3s 15s788ms 09 3 35s476ms 11s825ms 10 4 53s501ms 13s375ms 11 1 18s132ms 18s132ms 12 3 36s562ms 12s187ms 13 3 48s492ms 16s164ms 14 8 1m17s 9s727ms 15 4 52s32ms 13s8ms 16 5 1m 12s105ms 17 6 1m21s 13s620ms 18 3 29s673ms 9s891ms 19 2 18s367ms 9s183ms 20 4 42s340ms 10s585ms 21 6 1m7s 11s199ms 22 5 1m1s 12s280ms 23 2 24s703ms 12s351ms Aug 13 00 4 42s155ms 10s538ms 01 5 54s281ms 10s856ms 02 2 23s592ms 11s796ms 03 2 23s883ms 11s941ms 04 6 1m26s 14s386ms 05 1 18s586ms 18s586ms 06 7 2m8s 18s317ms 07 8 1m46s 13s253ms 08 5 1m20s 16s128ms 09 2 36s504ms 18s252ms 10 7 1m52s 16s8ms 11 4 56s822ms 14s205ms 12 3 37s720ms 12s573ms 13 3 43s622ms 14s540ms 14 4 35s430ms 8s857ms 15 3 23s728ms 7s909ms 16 5 41s541ms 8s308ms 17 8 1m34s 11s816ms 18 3 32s558ms 10s852ms 19 4 1m 15s32ms 20 4 34s615ms 8s653ms 21 2 10s302ms 5s151ms 22 4 57s707ms 14s426ms 23 4 1m25s 21s298ms Aug 14 00 38 8m58s 14s158ms 01 3 29s982ms 9s994ms 02 5 1m2s 12s506ms 03 5 1m8s 13s751ms 04 2 35s451ms 17s725ms 05 5 46s970ms 9s394ms 06 4 25s555ms 6s388ms 09 3 43s546ms 14s515ms 12 2 18s562ms 9s281ms 15 5 1m28s 17s654ms 16 23 14m25s 37s625ms 18 1 12s471ms 12s471ms 19 1 11s742ms 11s742ms Aug 15 05 16 11m18s 42s406ms 06 57 40m47s 42s937ms 07 21 12m40s 36s221ms 08 18 9m8s 30s487ms 09 5 1m25s 17s121ms 10 2 34s804ms 17s402ms 11 2 34s536ms 17s268ms 12 3 50s259ms 16s753ms [ User: pubeu - Total duration: 1h8m42s - Times executed: 290 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1239590'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 08:42:14 Duration: 2m28s Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1239590'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 06:45:32 Duration: 2m1s Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1239590'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 06:49:05 Duration: 1m59s Bind query: yes
8 5s1ms 5m51s 15s754ms 949 4h9m11s select r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refacc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, count(*) over () fullrowcount from reference r where r.id in ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) order by r.sort_txt limit ?;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Aug 10 05 1 5s761ms 5s761ms 08 2 14s53ms 7s26ms 09 7 1m 8s689ms 10 4 1m28s 22s216ms 11 1 5s495ms 5s495ms 15 1 1m9s 1m9s Aug 11 07 1 34s987ms 34s987ms 08 3 3m33s 1m11s 17 1 1m10s 1m10s 23 1 56s966ms 56s966ms Aug 12 12 1 50s340ms 50s340ms 15 1 31s223ms 31s223ms 18 1 6s857ms 6s857ms 20 1 41s549ms 41s549ms Aug 13 01 1 1m19s 1m19s 03 1 48s531ms 48s531ms 04 1 6s102ms 6s102ms 07 2 10s910ms 5s455ms 08 2 10s667ms 5s333ms 09 3 1m13s 24s474ms 10 6 1m50s 18s356ms 11 9 51s841ms 5s760ms 12 5 3m25s 41s116ms 13 7 38s689ms 5s527ms 14 3 53s818ms 17s939ms 15 1 5s78ms 5s78ms 16 3 15s825ms 5s275ms 17 15 3m11s 12s788ms 18 5 30s558ms 6s111ms 19 2 10s316ms 5s158ms 21 11 58s971ms 5s361ms 22 3 16s67ms 5s355ms 23 98 37m37s 23s34ms Aug 14 00 84 19m56s 14s249ms 01 9 51s631ms 5s736ms 02 4 52s937ms 13s234ms 03 4 23s712ms 5s928ms 04 4 1m10s 17s600ms 05 13 1m16s 5s871ms 06 12 1m4s 5s359ms 08 1 5s897ms 5s897ms 09 5 29s304ms 5s860ms 11 8 2m54s 21s837ms 16 44 6m9s 8s402ms 19 1 5s11ms 5s11ms 22 6 32s924ms 5s487ms 23 4 22s779ms 5s694ms Aug 15 00 7 1m9s 9s983ms 05 104 27m17s 15s742ms 06 234 1h9m9s 17s731ms 07 76 24m4s 19s10ms 08 122 23m49s 11s720ms 09 3 18s75ms 6s25ms [ User: pubeu - Total duration: 1h31m19s - Times executed: 354 ]
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2101536')) ORDER BY r.sort_txt LIMIT 50;
Date: 2025-08-13 23:33:27 Duration: 5m51s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2105591')) ORDER BY r.sort_txt LIMIT 50;
Date: 2025-08-13 23:33:18 Duration: 5m49s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2105591')) ORDER BY r.sort_txt LIMIT 50;
Date: 2025-08-13 23:33:21 Duration: 5m41s Database: ctdprd51 User: pubeu Bind query: yes
9 5s6ms 52s592ms 13s848ms 260 1h select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.ixn_id = any (array (( select ixn_id from ixn_anatomy where anatomy_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?)))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Aug 10 08 1 7s837ms 7s837ms Aug 12 13 1 7s630ms 7s630ms 18 1 7s625ms 7s625ms 19 1 7s988ms 7s988ms Aug 13 00 1 8s186ms 8s186ms 02 1 8s175ms 8s175ms 04 1 7s908ms 7s908ms 05 1 8s17ms 8s17ms 09 1 8s681ms 8s681ms 11 1 7s811ms 7s811ms 18 1 7s635ms 7s635ms 23 2 32s631ms 16s315ms Aug 14 00 2 12s817ms 6s408ms 04 1 7s729ms 7s729ms Aug 15 05 58 16m10s 16s738ms 06 116 26m42s 13s812ms 07 30 6m14s 12s490ms 08 31 7m23s 14s320ms 09 5 38s189ms 7s637ms 10 1 7s469ms 7s469ms 13 1 7s572ms 7s572ms 14 2 15s6ms 7s503ms [ User: pubeu - Total duration: 5m6s - Times executed: 33 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.ixn_id = ANY (ARRAY (( select ixn_id from ixn_anatomy where anatomy_id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2117193')))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 06:44:50 Duration: 52s592ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.ixn_id = ANY (ARRAY (( select ixn_id from ixn_anatomy where anatomy_id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2117193')))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 06:43:56 Duration: 51s491ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.ixn_id = ANY (ARRAY (( select ixn_id from ixn_anatomy where anatomy_id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2117193')))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 07:02:49 Duration: 51s391ms Bind query: yes
10 5s2ms 1m24s 13s31ms 1,800 6h30m57s select * from ( select g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, count(*) over () fullrowcount from term g where g.id in ( select gt.gene_id from dag_path dp inner join gene_taxon gt on dp.descendant_object_id = gt.taxon_id where dp.ancestor_object_id = ? union all select gcr.gene_id from dag_path dp inner join gene_chem_reference gcr on dp.descendant_object_id = gcr.taxon_id where dp.ancestor_object_id = ?) offset ?) mq order by mq.genesymbolsort limit ?;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Aug 10 00 5 32s545ms 6s509ms 01 2 13s512ms 6s756ms 04 3 19s238ms 6s412ms 05 2 12s714ms 6s357ms 06 1 6s443ms 6s443ms 07 1 6s498ms 6s498ms 09 1 9s196ms 9s196ms 10 1 6s691ms 6s691ms 16 1 6s466ms 6s466ms Aug 12 08 1 5s986ms 5s986ms 09 2 13s94ms 6s547ms 11 1 6s172ms 6s172ms 14 2 12s652ms 6s326ms 18 3 17s127ms 5s709ms 20 2 12s949ms 6s474ms 21 1 6s312ms 6s312ms 23 3 19s188ms 6s396ms Aug 13 02 1 7s864ms 7s864ms 04 1 6s476ms 6s476ms 06 2 13s161ms 6s580ms 07 3 19s735ms 6s578ms 09 1 6s529ms 6s529ms 10 1 6s356ms 6s356ms 11 3 17s913ms 5s971ms 12 1 6s269ms 6s269ms 13 1 6s743ms 6s743ms 14 1 6s331ms 6s331ms 15 5 35s684ms 7s136ms 17 4 22s624ms 5s656ms 19 1 5s334ms 5s334ms 21 1 7s213ms 7s213ms 22 2 14s220ms 7s110ms 23 39 5m22s 8s264ms Aug 14 00 72 11m7s 9s270ms 01 2 14s888ms 7s444ms 02 3 19s771ms 6s590ms 04 1 8s906ms 8s906ms 05 7 46s255ms 6s607ms 08 1 7s165ms 7s165ms 09 2 12s158ms 6s79ms 11 3 18s388ms 6s129ms 15 1 6s673ms 6s673ms 16 36 4m13s 7s29ms 22 2 10s802ms 5s401ms 23 1 6s130ms 6s130ms Aug 15 00 6 49s512ms 8s252ms 05 283 1h5m2s 13s789ms 06 681 2h46m10s 14s640ms 07 215 1h6m28s 18s551ms 08 356 59m43s 10s66ms 09 5 31s52ms 6s210ms 10 7 42s958ms 6s136ms 11 10 1m2s 6s228ms 12 5 31s124ms 6s224ms 13 2 12s189ms 6s94ms [ User: pubeu - Total duration: 39m31s - Times executed: 308 ]
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '663702' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '663702') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-08-15 07:03:13 Duration: 1m24s Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '663702' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '663702') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-08-15 06:53:34 Duration: 1m20s Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '663702' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '663702') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-08-15 06:50:13 Duration: 1m16s Bind query: yes
11 5s34ms 23s367ms 12s463ms 422 1h27m39s with recursive sub_node ( object_id, id, path, lvl ) as ( select n.object_id, n.id, array[n.nm_sort], ? from dag_node n where n.object_id = ? union all select n.object_id, n.id, cast(path || n.nm_sort as varchar(?)[]), sn.lvl + ? from dag_node n inner join sub_node sn on (n.parent_id = sn.id)) select distinct t.nm prinm, t.nm_html prinmhtml, t.secondary_nm secondarynm, t.acc_db_cd accdbcd, t.acc_txt termacc, t.is_leaf isleaf, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_genes hasgenes, sn.lvl, sn.path, max(sn.lvl) over () maxlvl, t.has_phenotypes hasphenotypes from sub_node sn inner join term t on sn.object_id = t.id where sn.lvl <= ? order by sn.path;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Aug 13 23 2 14s591ms 7s295ms Aug 14 00 1 5s459ms 5s459ms Aug 15 05 80 15m52s 11s901ms 06 197 44m38s 13s595ms 07 62 15m4s 14s587ms 08 78 11m34s 8s901ms 09 2 10s444ms 5s222ms [ User: pubeu - Total duration: 4m15s - Times executed: 32 ]
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '663702' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 4 ORDER BY sn.path;
Date: 2025-08-15 07:02:24 Duration: 23s367ms Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '663702' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 4 ORDER BY sn.path;
Date: 2025-08-15 06:47:22 Duration: 22s598ms Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '663702' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 4 ORDER BY sn.path;
Date: 2025-08-15 06:50:11 Duration: 22s186ms Bind query: yes
12 5s1ms 50s854ms 10s922ms 521 1h34m50s select e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, ( select string_agg(distinct stressorterm.nm || ? || ( select cd from object_type where id = stressorterm.object_type_id) || ? || stressorterm.nm_html || ? || stressorterm.acc_txt || ? || stressorterm.acc_db_cd, ?)) as stressoragents, ( select string_agg(distinct coalesce(receptorterm.nm, ?) || ? || coalesce(( select cd from object_type where id = receptorterm.object_type_id), ?) || ? || coalesce(receptorterm.nm_html, ?) || ? || coalesce(receptorterm.acc_txt, ?) || ? || coalesce(receptorterm.acc_db_cd, ?) || ? || receptor.description, ?)) as receptors, ( select string_agg(distinct country.nm, ?)) as studycountries, ( select string_agg(distinct location.locality_txt, ?)) as localities, ( select string_agg(distinct event.medium_nm || ? || coalesce(event.medium_term_acc_txt, ?), ?)) as assaymediums, ( select string_agg(distinct exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd, ?)) as assayedmarkers, ( select string_agg(distinct diseaseterm.nm || ? || ( select cd from object_type where id = diseaseterm.object_type_id) || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd, ?)) as diseases, ( select string_agg(distinct phenotypeterm.nm || ? || ( select cd from object_type where id = phenotypeterm.object_type_id) || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd, ?)) as phenotypes, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, re.author_summary summary, count(*) over () fullrowcount from exposure e inner join reference r on e.reference_id = r.id inner join exp_stressor stressor on e.exp_stressor_id = stressor.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join term receptorterm on receptor.term_id = receptorterm.id left outer join exp_event event on e.exp_event_id = event.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join exp_event_location location on e.exp_event_id = location.exp_event_id left outer join country on location.country_id = country.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id inner join reference_exp re on e.reference_id = re.reference_id left outer join exp_study_factor expstudyfactor on re.id = expstudyfactor.reference_exp_id where e.reference_id = any (array ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like ?) and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressoragents limit ?;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Aug 10 00 1 5s62ms 5s62ms 05 4 28s210ms 7s52ms 07 2 12s786ms 6s393ms 08 8 1m9s 8s683ms 09 19 3m5s 9s746ms 10 4 23s497ms 5s874ms 11 3 18s324ms 6s108ms Aug 11 02 1 5s716ms 5s716ms 06 2 11s77ms 5s538ms Aug 12 02 3 24s509ms 8s169ms 10 1 6s743ms 6s743ms 11 1 5s59ms 5s59ms 13 3 19s197ms 6s399ms 14 1 5s638ms 5s638ms 15 1 5s68ms 5s68ms 18 8 50s377ms 6s297ms 20 2 10s275ms 5s137ms 21 7 38s623ms 5s517ms 22 4 22s855ms 5s713ms 23 1 5s776ms 5s776ms Aug 13 02 2 10s217ms 5s108ms 03 1 8s96ms 8s96ms 04 2 11s334ms 5s667ms 05 1 5s391ms 5s391ms 06 4 21s584ms 5s396ms 07 2 12s300ms 6s150ms 08 6 40s844ms 6s807ms 09 2 13s580ms 6s790ms 11 3 22s346ms 7s448ms 12 4 21s787ms 5s446ms 13 2 11s103ms 5s551ms 14 5 30s974ms 6s194ms 15 8 44s997ms 5s624ms 16 2 10s396ms 5s198ms 17 4 24s386ms 6s96ms 18 3 15s891ms 5s297ms 19 6 34s648ms 5s774ms 20 5 25s968ms 5s193ms 21 6 33s909ms 5s651ms 22 6 34s82ms 5s680ms 23 21 4m59s 14s277ms Aug 14 00 16 2m13s 8s314ms 01 2 14s578ms 7s289ms 02 3 19s80ms 6s360ms 03 4 21s94ms 5s273ms 04 2 10s21ms 5s10ms 05 6 37s848ms 6s308ms 06 4 21s292ms 5s323ms 07 1 5s180ms 5s180ms 08 5 27s903ms 5s580ms 09 13 1m31s 7s50ms 11 1 5s225ms 5s225ms 12 1 5s29ms 5s29ms 15 1 5s101ms 5s101ms 16 4 31s575ms 7s893ms 19 2 10s836ms 5s418ms 20 2 11s373ms 5s686ms 21 1 5s643ms 5s643ms Aug 15 05 69 13m15s 11s532ms 06 95 25m33s 16s144ms 07 36 10m3s 16s774ms 08 80 16m40s 12s511ms 09 2 12s821ms 6s410ms [ User: pubeu - Total duration: 27m1s - Times executed: 237 ]
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-08-15 06:46:20 Duration: 50s854ms Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-08-15 06:55:39 Duration: 48s997ms Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1416967') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-08-15 06:33:08 Duration: 45s275ms Bind query: yes
13 5s3ms 16s558ms 10s594ms 3,921 11h32m19s select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where exposuremarkerterm.id = ? or receptorterm.id = ? group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Aug 10 09 2 11s218ms 5s609ms Aug 13 10 1 5s124ms 5s124ms 11 1 5s375ms 5s375ms 12 2 10s519ms 5s259ms 17 1 5s143ms 5s143ms 23 58 7m36s 7s864ms Aug 14 00 124 17m33s 8s497ms 01 3 17s158ms 5s719ms 05 3 18s788ms 6s262ms 06 1 5s404ms 5s404ms 09 1 6s412ms 6s412ms 16 115 13m4s 6s821ms 22 1 5s612ms 5s612ms Aug 15 00 5 41s629ms 8s325ms 05 725 1h53m52s 9s424ms 06 1,670 5h23m4s 11s607ms 07 548 2h8s 13s154ms 08 660 1h34m46s 8s616ms [ User: pubeu - Total duration: 46m7s - Times executed: 363 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '2098302' or receptorTerm.id = '2098302' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-08-15 06:44:28 Duration: 16s558ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1603623' or receptorTerm.id = '1603623' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-08-15 07:04:10 Duration: 16s523ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1972847' or receptorTerm.id = '1972847' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-08-15 06:44:59 Duration: 16s490ms Bind query: yes
14 5s7ms 31s325ms 10s109ms 224 37m44s select * from ( select g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, count(*) over () fullrowcount from term g where g.id in ( select gt.gene_id from dag_path dp inner join gene_taxon gt on dp.descendant_object_id = gt.taxon_id where dp.ancestor_object_id = ? union all select gcr.gene_id from dag_path dp inner join gene_chem_reference gcr on dp.descendant_object_id = gcr.taxon_id where dp.ancestor_object_id = ?) offset ?) mq order by mq.genesymbolsort limit ? offset ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Aug 12 22 1 6s417ms 6s417ms Aug 13 03 2 10s565ms 5s282ms 06 1 5s465ms 5s465ms 07 1 5s102ms 5s102ms 08 1 5s69ms 5s69ms 09 2 13s48ms 6s524ms 10 7 41s402ms 5s914ms 13 1 5s7ms 5s7ms 14 1 5s121ms 5s121ms 15 3 23s76ms 7s692ms 18 1 5s62ms 5s62ms 19 2 10s103ms 5s51ms 20 1 5s446ms 5s446ms 23 4 1m30s 22s536ms Aug 14 00 18 2m47s 9s280ms 01 2 15s600ms 7s800ms 04 2 11s39ms 5s519ms 05 2 13s485ms 6s742ms 06 1 5s537ms 5s537ms 10 1 5s473ms 5s473ms 11 1 5s43ms 5s43ms 13 1 8s18ms 8s18ms 16 37 4m23s 7s129ms 20 1 5s144ms 5s144ms 22 6 41s73ms 6s845ms 23 2 10s996ms 5s498ms Aug 15 05 26 4m16s 9s879ms 06 60 12m59s 12s992ms 07 30 6m35s 13s173ms 08 6 49s605ms 8s267ms [ User: pubeu - Total duration: 10m25s - Times executed: 85 ]
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '663702' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '663702') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50 OFFSET 500;
Date: 2025-08-13 23:28:47 Duration: 31s325ms Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '663702' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '663702') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50 OFFSET 450;
Date: 2025-08-13 23:28:25 Duration: 29s1ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '663702' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '663702') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50 OFFSET 550;
Date: 2025-08-13 23:28:09 Duration: 24s92ms Database: ctdprd51 User: pubeu Bind query: yes
15 5s1ms 19s628ms 10s92ms 1,435 4h1m23s select count(*) from gene_disease gd where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?);Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Aug 10 08 1 7s113ms 7s113ms Aug 13 11 1 5s90ms 5s90ms 13 1 5s39ms 5s39ms 17 2 10s221ms 5s110ms 18 1 5s157ms 5s157ms 23 152 18m6s 7s149ms Aug 14 00 71 9m48s 8s283ms 05 5 27s421ms 5s484ms 09 1 5s699ms 5s699ms 16 100 10m36s 6s361ms Aug 15 00 5 41s639ms 8s327ms 05 181 30m52s 10s235ms 06 475 1h32m25s 11s675ms 07 203 44m23s 13s122ms 08 236 33m22s 8s484ms [ User: pubeu - Total duration: 24m56s - Times executed: 214 ]
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SELECT /* DiseaseGeneAssnsDAO.rowCount */ COUNT(*) FROM gene_disease gd WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341');
Date: 2025-08-15 06:47:59 Duration: 19s628ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO.rowCount */ COUNT(*) FROM gene_disease gd WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341');
Date: 2025-08-15 07:02:56 Duration: 19s565ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO.rowCount */ COUNT(*) FROM gene_disease gd WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341');
Date: 2025-08-15 07:05:57 Duration: 19s438ms Bind query: yes
16 5s5ms 20s369ms 9s568ms 214 34m7s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where diseaseterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Aug 10 09 1 5s5ms 5s5ms Aug 13 23 5 37s320ms 7s464ms Aug 15 05 35 6m2s 10s345ms 06 98 16m 9s797ms 07 37 5m59s 9s727ms 08 38 5m23s 8s502ms [ User: pubeu - Total duration: 3m3s - Times executed: 17 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2100341') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-08-15 07:04:45 Duration: 20s369ms Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2103600') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-08-15 08:37:53 Duration: 20s73ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2100341') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-08-15 07:06:11 Duration: 19s747ms Bind query: yes
17 5s12ms 47s60ms 8s674ms 1,471 3h32m39s select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where associatedterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Aug 10 00 11 1m15s 6s907ms 01 26 2m59s 6s900ms 02 13 1m29s 6s878ms 03 15 1m42s 6s802ms 04 13 1m28s 6s771ms 05 11 1m14s 6s787ms 06 5 34s646ms 6s929ms 07 21 2m26s 6s963ms 08 20 2m26s 7s325ms 09 34 4m35s 8s106ms 10 10 1m16s 7s641ms 11 12 1m21s 6s785ms 12 7 47s697ms 6s813ms 13 12 1m21s 6s800ms 14 5 33s950ms 6s790ms 15 6 40s762ms 6s793ms 16 8 54s601ms 6s825ms 17 6 40s120ms 6s686ms 18 5 33s567ms 6s713ms 19 5 32s696ms 6s539ms 20 8 52s656ms 6s582ms 21 3 19s785ms 6s595ms 22 2 13s595ms 6s797ms 23 4 27s357ms 6s839ms Aug 11 00 5 33s125ms 6s625ms 01 3 20s265ms 6s755ms 02 5 34s584ms 6s916ms 03 2 13s134ms 6s567ms 04 3 20s423ms 6s807ms 05 3 19s628ms 6s542ms 06 8 54s409ms 6s801ms 07 9 59s661ms 6s629ms 08 6 40s633ms 6s772ms 09 1 6s707ms 6s707ms 10 8 53s100ms 6s637ms 11 3 20s5ms 6s668ms 12 8 53s247ms 6s655ms 13 3 20s347ms 6s782ms 14 5 33s930ms 6s786ms 15 12 1m21s 6s790ms 16 8 53s147ms 6s643ms 17 5 33s383ms 6s676ms 18 5 32s962ms 6s592ms 19 8 54s557ms 6s819ms 20 5 33s755ms 6s751ms 21 2 13s706ms 6s853ms 22 6 40s404ms 6s734ms 23 5 33s674ms 6s734ms Aug 12 00 12 1m23s 6s966ms 01 2 13s765ms 6s882ms 02 9 1m2s 6s944ms 03 4 26s869ms 6s717ms 04 5 33s780ms 6s756ms 05 9 1m 6s761ms 06 8 54s686ms 6s835ms 07 8 55s489ms 6s936ms 08 12 1m21s 6s755ms 09 11 1m15s 6s832ms 10 10 1m7s 6s788ms 11 10 1m6s 6s691ms 12 10 1m7s 6s730ms 13 15 1m41s 6s777ms 14 13 1m29s 6s847ms 15 14 1m37s 6s929ms 16 10 1m10s 7s56ms 17 11 1m17s 7s26ms 18 11 1m17s 7s27ms 19 16 1m50s 6s919ms 20 22 2m32s 6s951ms 21 26 3m2s 7s14ms 22 25 2m57s 7s112ms 23 12 1m22s 6s836ms Aug 13 00 9 1m4s 7s207ms 01 16 1m50s 6s908ms 02 14 1m36s 6s927ms 03 15 1m45s 7s33ms 04 16 1m56s 7s255ms 05 1 7s489ms 7s489ms 06 15 1m46s 7s83ms 07 23 2m45s 7s188ms 08 14 1m40s 7s162ms 09 13 1m34s 7s257ms 10 18 2m5s 6s998ms 11 14 1m40s 7s167ms 12 9 1m3s 7s99ms 13 11 1m17s 7s54ms 14 13 1m34s 7s263ms 15 19 2m17s 7s259ms 16 10 1m11s 7s153ms 17 11 1m23s 7s576ms 18 17 2m9s 7s641ms 19 17 1m59s 7s49ms 20 8 58s393ms 7s299ms 21 13 1m34s 7s288ms 22 12 1m26s 7s200ms 23 35 6m52s 11s776ms Aug 14 00 28 4m47s 10s277ms 01 18 2m7s 7s63ms 02 3 20s360ms 6s786ms 03 9 1m3s 7s74ms 04 17 2m1s 7s122ms 05 15 1m58s 7s916ms 06 12 1m23s 6s940ms 07 12 1m24s 7s78ms 08 15 1m52s 7s523ms 09 28 3m31s 7s560ms 10 6 44s245ms 7s374ms 11 7 50s92ms 7s156ms 12 1 6s945ms 6s945ms 13 2 13s763ms 6s881ms 14 2 13s395ms 6s697ms 15 3 20s453ms 6s817ms 16 9 1m24s 9s423ms 17 1 7s101ms 7s101ms 19 5 35s830ms 7s166ms 20 3 22s889ms 7s629ms 22 2 14s117ms 7s58ms Aug 15 05 42 10m15s 14s659ms 06 89 26m43s 18s11ms 07 43 12m11s 17s12ms 08 59 13m27s 13s692ms 09 7 53s942ms 7s706ms 10 5 33s816ms 6s763ms 11 6 40s29ms 6s671ms 13 3 20s283ms 6s761ms 14 1 6s613ms 6s613ms [ User: pubeu - Total duration: 2h15m51s - Times executed: 1124 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1416967'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 06:43:45 Duration: 47s60ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1416967'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 07:05:19 Duration: 45s736ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1416967'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 06:47:41 Duration: 45s460ms Bind query: yes
18 5s26ms 17s50ms 7s836ms 203 26m30s select c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposurereferencecount, case when cd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from chem_disease_axn a where a.chem_id = cd.chem_id and a.disease_id = cd.disease_id) else null end actiontypes from chem_disease cd inner join term c on cd.chem_id = c.id inner join term d on cd.disease_id = d.id where cd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, cd.network_score desc nulls last, d.nm_sort, c.nm_sort limit ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Aug 13 23 5 39s801ms 7s960ms Aug 15 05 35 4m26s 7s603ms 06 104 13m51s 7s993ms 07 34 4m46s 8s421ms 08 25 2m47s 6s694ms [ User: pubeu - Total duration: 1m10s - Times executed: 8 ]
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2025-08-15 06:50:50 Duration: 17s50ms Bind query: yes
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100341') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2025-08-15 06:38:32 Duration: 13s933ms Bind query: yes
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2105591') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2025-08-15 07:21:48 Duration: 13s578ms Bind query: yes
19 5s16ms 35s909ms 7s702ms 285 36m35s select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ? offset ?;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Aug 10 06 1 5s680ms 5s680ms 13 1 5s861ms 5s861ms 18 1 7s209ms 7s209ms Aug 11 05 1 5s541ms 5s541ms 08 2 35s579ms 17s789ms 10 1 8s943ms 8s943ms 23 2 10s736ms 5s368ms Aug 12 00 1 5s474ms 5s474ms 10 1 9s962ms 9s962ms 14 3 15s439ms 5s146ms 16 4 25s216ms 6s304ms 17 3 16s710ms 5s570ms 18 10 1m14s 7s420ms 19 4 21s549ms 5s387ms 21 3 22s70ms 7s356ms 22 4 22s129ms 5s532ms Aug 13 00 3 16s520ms 5s506ms 01 1 5s134ms 5s134ms 03 1 5s97ms 5s97ms 04 2 41s238ms 20s619ms 06 1 14s956ms 14s956ms 07 1 5s104ms 5s104ms 08 5 28s155ms 5s631ms 10 3 16s735ms 5s578ms 11 1 5s958ms 5s958ms 12 1 5s190ms 5s190ms 13 10 56s926ms 5s692ms 15 3 17s552ms 5s850ms 16 2 13s344ms 6s672ms 18 4 24s774ms 6s193ms 19 6 36s71ms 6s11ms 20 4 22s88ms 5s522ms 21 1 5s464ms 5s464ms 22 3 27s696ms 9s232ms 23 13 1m32s 7s144ms Aug 14 00 14 1m34s 6s776ms 02 2 10s480ms 5s240ms 03 1 5s16ms 5s16ms 04 8 45s975ms 5s746ms 05 28 3m34s 7s643ms 07 2 12s290ms 6s145ms 08 1 5s119ms 5s119ms 09 1 10s970ms 10s970ms 10 1 11s682ms 11s682ms 12 1 5s100ms 5s100ms 13 2 10s186ms 5s93ms 14 3 15s554ms 5s184ms 15 3 18s391ms 6s130ms 16 7 1m4s 9s229ms 17 3 22s970ms 7s656ms 18 1 7s851ms 7s851ms 19 5 27s930ms 5s586ms 20 6 36s669ms 6s111ms 21 3 16s623ms 5s541ms 22 12 1m38s 8s190ms 23 35 3m17s 5s656ms Aug 15 00 2 38s340ms 19s170ms 05 2 37s66ms 18s533ms 06 21 4m33s 13s28ms 07 3 27s710ms 9s236ms 08 11 2m32s 13s869ms [ User: pubeu - Total duration: 25m33s - Times executed: 223 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2112418') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 3969900;
Date: 2025-08-13 04:54:55 Duration: 35s909ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2101651') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 4665100;
Date: 2025-08-14 05:58:09 Duration: 33s232ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2112418') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 3969900;
Date: 2025-08-15 00:18:31 Duration: 33s31ms Database: ctdprd51 User: pubeu Bind query: yes
20 5s768ms 20s605ms 7s598ms 149 18m52s select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?)) and ptr.term_object_type_id = ? and ptr.phenotype_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?))) and taxonterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = ? and action_degree_type_nm in (...)) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Aug 10 00 1 7s405ms 7s405ms 01 1 7s334ms 7s334ms 02 1 7s269ms 7s269ms 03 1 7s256ms 7s256ms 04 1 7s253ms 7s253ms 05 3 21s960ms 7s320ms 06 1 6s926ms 6s926ms 08 1 7s356ms 7s356ms 09 1 7s265ms 7s265ms 10 1 7s338ms 7s338ms 11 1 7s264ms 7s264ms 12 1 6s875ms 6s875ms 13 1 7s239ms 7s239ms 14 1 7s159ms 7s159ms 15 1 7s274ms 7s274ms 16 1 7s26ms 7s26ms 17 1 7s42ms 7s42ms 18 1 7s314ms 7s314ms 19 1 6s937ms 6s937ms 20 1 7s299ms 7s299ms 21 1 6s984ms 6s984ms 22 1 7s153ms 7s153ms 23 1 8s81ms 8s81ms Aug 11 00 1 7s111ms 7s111ms 01 1 7s23ms 7s23ms 02 1 7s516ms 7s516ms 03 1 7s128ms 7s128ms 04 1 7s106ms 7s106ms 05 2 14s316ms 7s158ms 06 1 7s51ms 7s51ms 07 1 7s71ms 7s71ms 08 1 7s185ms 7s185ms 09 2 14s479ms 7s239ms 10 1 7s179ms 7s179ms 11 1 7s483ms 7s483ms 12 1 7s92ms 7s92ms 13 1 7s171ms 7s171ms 14 1 7s106ms 7s106ms 15 1 7s169ms 7s169ms 16 1 7s103ms 7s103ms 17 1 7s170ms 7s170ms 18 1 7s201ms 7s201ms 19 1 7s453ms 7s453ms 20 1 7s292ms 7s292ms 21 1 7s218ms 7s218ms 22 1 7s181ms 7s181ms 23 1 7s274ms 7s274ms Aug 12 00 1 7s243ms 7s243ms 01 1 7s470ms 7s470ms 02 1 7s440ms 7s440ms 03 1 7s42ms 7s42ms 04 1 7s343ms 7s343ms 05 3 21s697ms 7s232ms 06 1 7s247ms 7s247ms 07 1 7s336ms 7s336ms 08 1 7s228ms 7s228ms 09 1 7s310ms 7s310ms 10 1 7s73ms 7s73ms 11 1 6s908ms 6s908ms 12 1 7s419ms 7s419ms 13 1 7s165ms 7s165ms 14 1 7s102ms 7s102ms 15 1 7s300ms 7s300ms 16 1 7s608ms 7s608ms 17 1 7s361ms 7s361ms 18 1 8s88ms 8s88ms 19 1 7s76ms 7s76ms 20 1 7s559ms 7s559ms 21 1 7s251ms 7s251ms 23 1 6s908ms 6s908ms Aug 13 00 1 8s711ms 8s711ms 01 1 7s781ms 7s781ms 02 1 7s515ms 7s515ms 03 1 7s455ms 7s455ms 04 1 7s714ms 7s714ms 05 3 22s184ms 7s394ms 06 1 7s96ms 7s96ms 07 1 7s312ms 7s312ms 08 1 7s419ms 7s419ms 11 1 8s801ms 8s801ms 12 1 7s460ms 7s460ms 13 1 7s408ms 7s408ms 14 1 8s417ms 8s417ms 15 1 7s994ms 7s994ms 16 1 7s479ms 7s479ms 17 1 7s416ms 7s416ms 18 1 7s158ms 7s158ms 19 1 7s119ms 7s119ms 20 1 7s624ms 7s624ms 21 1 9s492ms 9s492ms 22 1 7s78ms 7s78ms 23 1 7s414ms 7s414ms Aug 14 01 1 8s16ms 8s16ms 02 1 7s795ms 7s795ms 03 1 7s240ms 7s240ms 04 1 7s179ms 7s179ms 05 1 7s196ms 7s196ms 06 1 7s204ms 7s204ms 07 1 7s198ms 7s198ms 08 1 7s497ms 7s497ms 09 1 8s443ms 8s443ms 10 1 7s599ms 7s599ms 11 1 7s110ms 7s110ms 12 1 7s398ms 7s398ms 13 1 7s438ms 7s438ms 14 1 7s478ms 7s478ms 15 1 7s90ms 7s90ms 16 1 5s768ms 5s768ms 17 1 7s663ms 7s663ms 18 1 7s94ms 7s94ms 19 1 7s760ms 7s760ms 20 1 7s410ms 7s410ms 21 1 7s306ms 7s306ms 22 1 7s765ms 7s765ms 23 1 7s428ms 7s428ms Aug 15 00 1 7s574ms 7s574ms 05 4 1m8s 17s139ms 06 1 9s544ms 9s544ms Aug 16 05 2 14s310ms 7s155ms 06 1 7s210ms 7s210ms 07 1 6s936ms 6s936ms 08 1 7s89ms 7s89ms 09 1 7s231ms 7s231ms 10 1 7s213ms 7s213ms 11 1 7s147ms 7s147ms 12 1 7s232ms 7s232ms 13 1 7s82ms 7s82ms 14 1 7s176ms 7s176ms 15 1 7s78ms 7s78ms 16 1 6s903ms 6s903ms 17 1 6s827ms 6s827ms 18 1 7s73ms 7s73ms 19 1 7s278ms 7s278ms 20 1 7s215ms 7s215ms 21 1 6s854ms 6s854ms 22 1 7s106ms 7s106ms 23 1 7s102ms 7s102ms [ User: pubeu - Total duration: 8m15s - Times executed: 67 ]
[ User: qaeu - Total duration: 14s337ms - Times executed: 2 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 05:48:01 Duration: 20s605ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 05:49:20 Duration: 20s400ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-15 05:49:20 Duration: 20s385ms Bind query: yes
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 11s305ms 2 5s652ms 5s652ms 5s652ms SELECT /* ChemDiseaseAssnsDAO */ ;Times Reported Time consuming prepare #1
Day Hour Count Duration Avg duration Aug 16 23 2 11s305ms 5s652ms -
SELECT /* ChemDiseaseAssnsDAO */ ;
Date: 2025-08-13 23:31:31 Duration: 5s652ms Database: postgres
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 0ms 1,050 0ms 0ms 0ms ;Times Reported Time consuming bind #1
Day Hour Count Duration Avg duration Aug 09 03 1 0ms 0ms 05 1 0ms 0ms 07 1 0ms 0ms 10 2 0ms 0ms 14 1 0ms 0ms 16 1 0ms 0ms Aug 10 07 4 0ms 0ms 08 2 0ms 0ms 22 2 0ms 0ms Aug 12 06 2 0ms 0ms Aug 13 23 8 0ms 0ms Aug 14 00 2 0ms 0ms 01 1 0ms 0ms 07 2 0ms 0ms 08 2 0ms 0ms 09 2 0ms 0ms 16 2 0ms 0ms Aug 15 05 93 0ms 0ms 06 612 0ms 0ms 07 213 0ms 0ms 08 66 0ms 0ms 11 9 0ms 0ms 12 12 0ms 0ms 13 6 0ms 0ms 14 3 0ms 0ms [ User: pubeu - Total duration: 8m38s - Times executed: 46 ]
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;
Date: Duration: 0ms Database: postgres User: ctdprd51 Remote: pubeu parameters: $1 = '2103087'
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Events
Log levels
Key values
- 1,807,541 Event entries
- (EVENTLOG entries are formaly LOG level entries that are not queries)
Events distribution (except queries)
Key values
- 0 PANIC entries
- 108858 FATAL entries
- 3911 ERROR entries
- 0 WARNING entries
- 311 EVENTLOG entries
Most Frequent Errors/Events
Key values
- 100,734 Max number of times the same event was reported
- 113,080 Total events found
Rank Times reported Error 1 100,734 FATAL: remaining connection slots are reserved for non-replication superuser connections
Times Reported Most Frequent Error / Event #1
Day Hour Count Aug 13 10 4 11 3 12 4 13 3 14 10 15 7 16 6 17 4 18 4 19 3 20 5 21 8 22 4 23 810 Aug 14 00 1,030 01 3 02 7 03 5 04 4 05 59 06 32 07 2 08 1 09 2 11 2 12 1 13 2 15 6 16 363 18 1 19 2 21 1 22 5 23 3 Aug 15 00 45 05 2,392 06 75,474 07 20,045 08 372 2 7,383 FATAL: sorry, too many clients already
Times Reported Most Frequent Error / Event #2
Day Hour Count Aug 14 00 17 Aug 15 06 6,071 07 1,295 3 3,048 ERROR: remaining connection slots are reserved for non-replication superuser connections
Times Reported Most Frequent Error / Event #3
Day Hour Count Aug 13 14 4 15 1 16 1 17 1 20 2 21 1 22 1 23 86 Aug 14 00 61 03 2 04 2 05 20 06 10 11 1 13 1 15 1 16 20 22 1 23 1 Aug 15 05 389 06 2,160 07 282 - ERROR: remaining connection slots are reserved for non-replication superuser connections
- ERROR: remaining connection slots are reserved for non-replication superuser connections
- ERROR: remaining connection slots are reserved for non-replication superuser connections
Context: parallel worker
Statement: SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm ,c.nm_html chemnmhtml ,c.acc_txt chemacc ,c.secondary_nm casRN ,c.id chemid ,d.nm diseasenm ,d.acc_txt diseaseacc ,d.acc_db_cd diseaseaccdbcd ,d.id diseaseid ,cd.network_score networkscore ,cd.indirect_gene_qty inferredcount ,cd.reference_qty referencecount ,cd.exposure_reference_qty exposureReferenceCount ,CASE WHEN cd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.chem_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1) ORDER BY actionTypes ,cd.network_score DESC NULLS LAST ,d.nm_sort ,c.nm_sort LIMIT 50Date: 2025-08-13 14:17:39 Database: ctdprd51 Application: User: pubeu Remote:
Context: parallel worker
Statement: SELECT /* ChemDiseaseAssnsDAO.rowCount */ COUNT(*) FROM chem_disease cd WHERE cd.chem_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1)Date: 2025-08-13 14:19:15 Database: ctdprd51 Application: User: pubeu Remote:
Context: parallel worker
Statement: SELECT /* ChemGenesDAO */ g.nm geneSymbol ,g.id geneId ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,COUNT(gcr.ixn_id) ixnCount ,COUNT(DISTINCT gcr.taxon_id) taxonCount ,COUNT(*) OVER() fullRowCount FROM gene_chem_reference gcr INNER JOIN term g ON gcr.gene_id = g.id WHERE gcr.chem_id IN(SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1) GROUP BY g.nm ,g.id ,g.acc_txt ,g.acc_db_cd ,g.nm_sort ORDER BY COUNT(gcr.ixn_id) DESC ,g.nm_sort LIMIT 50Date: 2025-08-13 14:19:15 Database: ctdprd51 Application: User: pubeu Remote:
4 412 FATAL: terminating background worker "..." due to administrator command
Times Reported Most Frequent Error / Event #4
Day Hour Count Aug 13 14 5 16 2 17 2 20 3 21 2 23 49 Aug 14 00 17 03 2 05 9 06 7 16 9 23 3 Aug 15 05 128 06 167 07 7 - FATAL: terminating background worker "parallel worker" due to administrator command
- FATAL: terminating background worker "parallel worker" due to administrator command
- FATAL: terminating background worker "parallel worker" due to administrator command
Statement: SELECT /* ChemDiseaseAssnsDAO.rowCount */ COUNT(*) FROM chem_disease cd WHERE cd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1)
Date: 2025-08-13 16:01:21
Statement: SELECT /* ChemGeneIxnsDAO */ g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,c.nm chemnm ,c.nm_html chemnmhtml ,c.acc_txt chemacc ,c.secondary_nm casRN ,c.id chemId ,i.ixn_prose_txt ixnProse ,i.ixn_prose_html ixnProseHtml ,i.actions_txt ixnActions ,i.id ixnId ,COUNT(DISTINCT gcr.reference_id) refCount ,COUNT(DISTINCT gcr.taxon_id) taxonCount ,COUNT(*) OVER() fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE gcr.chem_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1) GROUP BY g.nm ,g.nm_sort ,g.acc_txt ,g.acc_db_cd ,g.id ,c.nm ,c.nm_html ,c.nm_sort ,c.acc_txt ,c.id ,i.ixn_prose_txt ,i.ixn_prose_html ,i.sort_txt ,i.actions_txt ,i.id ORDER BY g.nm_sort ,c.nm_sort ,i.sort_txt LIMIT 50 OFFSET 1050
Date: 2025-08-13 17:50:04
Statement: SELECT /* ReferenceCitedChemsDAO */ c.id ,c.nm ,c.nm_html nmHtml ,c.acc_txt acc ,c.has_genes hasGenes ,c.has_diseases hasDiseases ,c.has_exposures hasExposures ,c.has_phenotypes hasPhenotypes FROM term c WHERE c.id IN( SELECT cdr.chem_id FROM chem_disease_reference cdr WHERE cdr.reference_id = $1 AND cdr.source_cd = 'C' UNION ALL SELECT gcr.chem_id FROM gene_chem_reference gcr WHERE gcr.reference_id = $2 UNION ALL select stressor.chem_id from exposure e ,exp_stressor stressor where e.reference_id = $3 and e.exp_stressor_id = stressor.id UNION ALL select event.exp_marker_term_id from exposure e ,exp_event event where e.reference_id = $4 and e.exp_event_id = event.id and event.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%' ) UNION ALL SELECT term_id FROM phenotype_term_reference ptr WHERE ptr.reference_id = $5 and ptr.term_object_type_id = 2) ORDER BY c.nm_sort
Date: 2025-08-13 21:44:09
5 299 FATAL: connection to client lost
Times Reported Most Frequent Error / Event #5
Day Hour Count Aug 10 02 1 05 1 Aug 11 08 1 15 1 Aug 12 06 3 20 6 21 5 22 2 Aug 13 02 1 04 1 06 2 08 3 13 6 16 4 17 6 19 9 23 20 Aug 14 00 18 01 6 02 3 03 5 04 4 05 10 06 2 09 1 11 3 12 5 15 1 16 14 17 5 22 2 Aug 15 05 2 06 13 07 55 08 31 09 30 10 5 11 6 12 2 13 1 14 2 15 1 - FATAL: connection to client lost
- FATAL: connection to client lost
Statement: select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm ,associatedTerm.id associatedTermId ,ptr.ixn_id ixnId ,associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort ,COALESCE( associatedTerm.secondary_nm, '' ) casRN ,phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype ,phenotypeTerm.id phenotypeId ,( SELECT STRING_AGG( distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE( taxonTerm.secondary_nm, '' ) ,'|' ) ) as taxonTerms ,( SELECT STRING_AGG( distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|' ) ) as anatomyTerms ,COUNT(DISTINCT taxonTerm.nm) taxonCount ,i.ixn_prose_html ixnProseHtml ,i.ixn_prose_txt ixnProse ,i.sort_txt ixnSort ,( SELECT STRING_AGG( distinct r.acc_txt,'|' ) ) as references ,COUNT(DISTINCT ptr.reference_id) refCount ,pt.indirect_term_qty inferredCount ,COUNT(*) OVER() fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY ( ARRAY ( ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1 ) ) ) and ptr.term_object_type_id = 2 group by associatedTerm ,associatedTermNmSort ,phenotype ,casRN ,ixnId ,ixnProseHtml ,ixnProse ,ixnSort ,associatedTermId ,phenotypeId ,inferredCount ORDER BY associatedTermNmSort LIMIT 50
Date: 2025-08-15 07:24:30
Statement: SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm ,phenotypeTerm.nm_html goNmHTML ,phenotypeTerm.acc_txt goAcc ,phenotypeTerm.id goId ,diseaseTerm.nm diseaseNm ,diseaseTerm.acc_txt diseaseAcc ,diseaseTerm.acc_db_cd diseaseAccDBCd ,diseaseTerm.id diseaseId ,via_gene_qty geneNetworkCount ,via_chem_qty chemNetworkCount ,indirect_reference_qty referenceCount ,COUNT(*) OVER() fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = $1 ) and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50
Date: 2025-08-15 07:25:06
6 287 LOG: could not send data to client: Broken pipe
Times Reported Most Frequent Error / Event #6
Day Hour Count Aug 10 02 1 05 1 Aug 11 08 1 15 1 Aug 12 06 3 20 4 21 5 22 2 Aug 13 02 1 04 1 06 2 08 3 13 6 16 4 17 5 19 9 23 20 Aug 14 00 18 01 6 02 4 03 5 04 2 05 9 06 2 09 1 11 3 12 4 15 1 16 10 17 5 22 2 Aug 15 05 2 06 13 07 55 08 29 09 30 10 5 11 6 12 2 13 1 14 2 15 1 - LOG: could not send data to client: Broken pipe
- LOG: could not send data to client: Broken pipe
Statement: select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm ,associatedTerm.id associatedTermId ,ptr.ixn_id ixnId ,associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort ,COALESCE( associatedTerm.secondary_nm, '' ) casRN ,phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype ,phenotypeTerm.id phenotypeId ,( SELECT STRING_AGG( distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE( taxonTerm.secondary_nm, '' ) ,'|' ) ) as taxonTerms ,( SELECT STRING_AGG( distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|' ) ) as anatomyTerms ,COUNT(DISTINCT taxonTerm.nm) taxonCount ,i.ixn_prose_html ixnProseHtml ,i.ixn_prose_txt ixnProse ,i.sort_txt ixnSort ,( SELECT STRING_AGG( distinct r.acc_txt,'|' ) ) as references ,COUNT(DISTINCT ptr.reference_id) refCount ,pt.indirect_term_qty inferredCount ,COUNT(*) OVER() fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY ( ARRAY ( ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1 ) ) ) and ptr.term_object_type_id = 2 group by associatedTerm ,associatedTermNmSort ,phenotype ,casRN ,ixnId ,ixnProseHtml ,ixnProse ,ixnSort ,associatedTermId ,phenotypeId ,inferredCount ORDER BY associatedTermNmSort LIMIT 50
Date: 2025-08-15 07:24:30
Statement: SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm ,phenotypeTerm.nm_html goNmHTML ,phenotypeTerm.acc_txt goAcc ,phenotypeTerm.id goId ,diseaseTerm.nm diseaseNm ,diseaseTerm.acc_txt diseaseAcc ,diseaseTerm.acc_db_cd diseaseAccDBCd ,diseaseTerm.id diseaseId ,via_gene_qty geneNetworkCount ,via_chem_qty chemNetworkCount ,indirect_reference_qty referenceCount ,COUNT(*) OVER() fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = $1 ) and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50
Date: 2025-08-15 07:25:06
7 274 ERROR: could not map dynamic shared memory segment
Times Reported Most Frequent Error / Event #7
Day Hour Count Aug 13 14 1 23 17 Aug 14 00 8 04 1 05 3 06 2 13 1 16 2 Aug 15 05 67 06 164 07 8 8 213 ERROR: syntax error in ts"..."
Times Reported Most Frequent Error / Event #8
Day Hour Count Aug 10 00 1 01 2 02 1 03 2 04 1 05 23 06 1 07 3 08 1 09 3 10 2 12 2 13 2 14 22 16 4 18 1 19 1 20 1 21 1 22 1 23 2 Aug 11 00 1 02 1 05 2 06 2 07 2 08 2 09 1 10 1 11 1 13 2 14 2 15 1 16 1 18 1 19 1 20 2 21 1 22 1 23 1 Aug 12 01 4 02 1 03 2 04 2 06 2 07 3 08 3 09 2 10 1 11 2 12 1 15 1 16 2 17 2 19 1 20 5 21 2 22 1 23 2 Aug 13 00 1 01 4 02 2 03 1 04 5 05 1 06 1 08 2 09 1 13 2 14 3 15 5 16 2 17 3 20 1 21 2 22 1 Aug 14 00 1 01 1 04 1 05 1 06 1 07 2 08 1 09 2 10 2 12 2 15 3 21 2 22 3 23 2 Aug 15 05 1 06 2 08 3 11 1 12 3 - ERROR: syntax error in ts"ON & THE & 14TH & DAY & OF & THE & EXPERIMENTAL & PERIOD, & COMPARED & WITH & THE & CONTROL & GROUP, & THE & ADDITION & OF & PENNISETUM & AND & BLACK & SOLDIER & FLY & POWDER & SIGNIFICANTLY & REDUCED & THE & EGGSHELL & WEIGHT, & SIGNIFICANTLY & INCREASED & THE & EGGSHELL & THICKNESS, & AND & SIGNIFICANTLY & INCREASED & THE & HASTELBORN & UNIT & OF & LAYING & HENS & P<0.05 & , & BUT & HAD & NO & SIGNIFICANT & EFFECT & ON & OTHER & INDICATORS & P>0.05"
- ERROR: syntax error in ts"(5-HT<4L> | 5HT<4L>)"
- ERROR: syntax error in ts"BIOLOGIC & PRODUCT & LPYRKB< & >AXFEEM"
Statement: SELECT /* GeneBasicQueryDAO */ sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Symbol' THEN true ELSE false END isNameMatch ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,CASE WHEN UPPER(l.nm) = $1 THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE l.object_type_id = 4 AND t.object_type_id = 4 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 4 AND i.nm_fts @@ to_tsquery('common.english_nostops', $2) ) UNION ALL SELECT /* acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,false isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,1 relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 4 AND (upper( l.acc_txt ) = $3 OR upper( l.acc_txt ) = $4 OR upper( l.acc_txt ) = $5 OR upper( l.acc_txt ) = $6 OR upper( l.acc_txt ) = $7 OR upper( l.acc_txt ) = $8 OR upper( l.acc_txt ) = $9 OR upper( l.acc_txt ) = $10 OR upper( l.acc_txt ) = $11 OR upper( l.acc_txt ) = $12 OR upper( l.acc_txt ) = $13 OR upper( l.acc_txt ) = $14 OR upper( l.acc_txt ) = $15 OR upper( l.acc_txt ) = $16 OR upper( l.acc_txt ) = $17 OR upper( l.acc_txt ) = $18 OR upper( l.acc_txt ) = $19 OR upper( l.acc_txt ) = $20 OR upper( l.acc_txt ) = $21 OR upper( l.acc_txt ) = $22 OR upper( l.acc_txt ) = $23 OR upper( l.acc_txt ) = $24 OR upper( l.acc_txt ) = $25 OR upper( l.acc_txt ) = $26 OR upper( l.acc_txt ) = $27 OR upper( l.acc_txt ) = $28 OR upper( l.acc_txt ) = $29 OR upper( l.acc_txt ) = $30 OR upper( l.acc_txt ) = $31 OR upper( l.acc_txt ) = $32 OR upper( l.acc_txt ) = $33 OR upper( l.acc_txt ) = $34 OR upper( l.acc_txt ) = $35 OR upper( l.acc_txt ) = $36 OR upper( l.acc_txt ) = $37 OR upper( l.acc_txt ) = $38 OR upper( l.acc_txt ) = $39 OR upper( l.acc_txt ) = $40 OR upper( l.acc_txt ) = $41 OR upper( l.acc_txt ) = $42 OR upper( l.acc_txt ) = $43 OR upper( l.acc_txt ) = $44 OR upper( l.acc_txt ) = $45 OR upper( l.acc_txt ) = $46 OR upper( l.acc_txt ) = $47 OR upper( l.acc_txt ) = $48 OR upper( l.acc_txt ) = $49 OR upper( l.acc_txt ) = $50 OR upper( l.acc_txt ) = $51 OR upper( l.acc_txt ) = $52 OR upper( l.acc_txt ) = $53 OR upper( l.acc_txt ) = $54 OR upper( l.acc_txt ) = $55 ) ORDER BY 13,14 ) sq LIMIT 50
Date: 2025-08-10 03:35:00 Database: ctdprd51 Application: User: pubeu Remote:
Statement: SELECT /* GeneBasicQueryDAO */ sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Symbol' THEN true ELSE false END isNameMatch ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,CASE WHEN UPPER(l.nm) = $1 THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE l.object_type_id = 4 AND t.object_type_id = 4 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 4 AND i.nm_fts @@ to_tsquery('common.english_nostops', $2) ) UNION ALL SELECT /* acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,false isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,1 relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 4 AND (upper( l.acc_txt ) = $3 OR upper( l.acc_txt ) = $4 OR upper( l.acc_txt ) = $5 ) ORDER BY 13,14 ) sq LIMIT 50
Date: 2025-08-10 04:29:54
Statement: SELECT /* MeshBasicQueryDAO */ sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isNameMatch ,t.has_genes hasGenes ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_phenotypes hasPhenotypes ,CASE WHEN UPPER(l.nm) = $1 THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasExposures FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE t.object_type_id = 2 AND l.object_type_id = 2 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 2 AND i.nm_fts @@ to_tsquery('common.english_nostops', $2) ) UNION ALL SELECT /* term acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,t.has_genes hasgenes ,t.has_chems haschems ,t.has_diseases hasdiseases ,t.has_phenotypes hasPhenotypes ,1 relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasexposures FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 2 AND (upper( l.acc_txt ) = $3 OR upper( l.acc_txt ) = $4 OR upper( l.acc_txt ) = $5 OR upper( l.acc_txt ) = $6 OR upper( l.acc_txt ) = $7 ) ORDER BY 13,14 ) sq LIMIT 50
Date: 2025-08-10 05:06:19 Database: ctdprd51 Application: User: pubeu Remote:
9 175 ERROR: canceling statement due to user request
Times Reported Most Frequent Error / Event #9
Day Hour Count Aug 11 08 1 Aug 12 06 5 20 6 21 5 Aug 13 02 1 06 2 08 3 13 6 16 5 17 5 19 8 23 17 Aug 14 00 1 01 7 02 4 03 5 04 4 05 10 06 2 11 3 12 4 15 1 16 13 17 5 22 2 Aug 15 05 2 06 1 07 8 08 27 09 12 - ERROR: canceling statement due to user request
- ERROR: canceling statement due to user request
- ERROR: canceling statement due to user request
Statement: SELECT pg_database_size(datname::text) FROM pg_catalog.pg_database WHERE datistemplate = false AND datname = $1;
Date: 2025-08-11 08:24:09
Statement: SELECT json_object_agg(coalesce (datname,'null'), row_to_json(T)) FROM ( SELECT
Date: 2025-08-12 06:33:22 Database: postgres Application: User: zbx_monitor Remote:
Statement: SELECT count(*) FROM pg_catalog.pg_stat_all_tables WHERE (n_dead_tup/(n_live_tup+n_dead_tup)::float8) > 0.2 AND (n_live_tup+n_dead_tup) > 50;
Date: 2025-08-12 06:33:22 Database: postgres Application: User: zbx_monitor Remote:
10 63 ERROR: could not attach to dynamic shared area
Times Reported Most Frequent Error / Event #10
Day Hour Count Aug 13 23 7 Aug 14 00 2 06 4 16 1 Aug 15 05 16 06 33 - ERROR: could not attach to dynamic shared area
- ERROR: could not attach to dynamic shared area
- ERROR: could not attach to dynamic shared area
Statement: SELECT /* ReferenceCitedChemsDAO */ c.id ,c.nm ,c.nm_html nmHtml ,c.acc_txt acc ,c.has_genes hasGenes ,c.has_diseases hasDiseases ,c.has_exposures hasExposures ,c.has_phenotypes hasPhenotypes FROM term c WHERE c.id IN( SELECT cdr.chem_id FROM chem_disease_reference cdr WHERE cdr.reference_id = $1 AND cdr.source_cd = 'C' UNION ALL SELECT gcr.chem_id FROM gene_chem_reference gcr WHERE gcr.reference_id = $2 UNION ALL select stressor.chem_id from exposure e ,exp_stressor stressor where e.reference_id = $3 and e.exp_stressor_id = stressor.id UNION ALL select event.exp_marker_term_id from exposure e ,exp_event event where e.reference_id = $4 and e.exp_event_id = event.id and event.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%' ) UNION ALL SELECT term_id FROM phenotype_term_reference ptr WHERE ptr.reference_id = $5 and ptr.term_object_type_id = 2) ORDER BY c.nm_sort
Date: 2025-08-13 23:23:55
Statement: SELECT /* ReferenceCitedGenesDAO */ g.nm symbol ,g.nm_html symbolHtml ,g.secondary_nm nm ,g.acc_txt acc ,g.acc_db_cd accDbCd ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,g.id FROM term g WHERE g.id IN( SELECT gdr.gene_id FROM gene_disease_reference gdr WHERE gdr.reference_id = $1 AND gdr.source_cd IN ('C','O') UNION ALL SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE gcr.reference_id = $2 UNION ALL SELECT ggr.from_gene_id FROM gene_gene_reference ggr WHERE ggr.reference_id = $3 UNION ALL SELECT ggr.to_gene_id FROM gene_gene_reference ggr WHERE ggr.reference_id = $4 UNION ALL select event.exp_marker_term_id from exposure e ,exp_event event where e.reference_id = $5 and e.exp_event_id = event.id and event.exp_marker_type_id in ( select id from exp_marker_type where nm like 'gene%' ) UNION ALL SELECT term_id FROM phenotype_term_reference ptr WHERE ptr.reference_id = $6 and ptr.term_object_type_id = 4 ) ORDER BY g.nm_sort
Date: 2025-08-13 23:23:55
Statement: SELECT /* ChemGenesDAO */ g.nm geneSymbol ,g.id geneId ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,COUNT(gcr.ixn_id) ixnCount ,COUNT(DISTINCT gcr.taxon_id) taxonCount ,COUNT(*) OVER() fullRowCount FROM gene_chem_reference gcr INNER JOIN term g ON gcr.gene_id = g.id WHERE gcr.chem_id IN(SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1) GROUP BY g.nm ,g.id ,g.acc_txt ,g.acc_db_cd ,g.nm_sort ORDER BY COUNT(gcr.ixn_id) DESC ,g.nm_sort LIMIT 50
Date: 2025-08-13 23:23:55
11 33 ERROR: remaining connection slots are reserved for non-replication superuser connections r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,(...) ) as studyFactorNms ,(...) ) as associatedStudyTitles ,(...) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd ,'|' ) ) as stressorAgents ,(...) || '^' || COALESCE(...), '' ) || '^' || COALESCE(...) || '^' || COALESCE(...) || '^' || COALESCE(...) || '^' || receptor.description ,'|' ) ) as receptors ,(...) ) as studyCountries ,(...) ) as localities ,(...),' | ' ) ) as assayMediums ,(...) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd ,'|' ) ) as assayedMarkers ,(...) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd ,'|' ) ) as diseases ,(...) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd ,'|' ) ) as phenotypes ,(...) ) as anatomyTerms ,re.author_summary summary ,COUNT(...) OVER() fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (...) and event1.id = e1.exp_event_id UNION select reference_id from exposure e1 ,term t ,exp_receptor r where t.id = and t.id = r.term_id and r.id = e1.exp_receptor_id ) ) group by e.reference_acc_txt ,r.abbr_authors_txt ,pub_start_yr ,re.author_summary order by stressorAgents LIMIT 50
Times Reported Most Frequent Error / Event #11
Day Hour Count Aug 15 05 3 06 27 07 3 - ERROR: remaining connection slots are reserved for non-replication superuser connections r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,( SELECT STRING_AGG( DISTINCT expStudyFactor.study_factor_nm,' | ' ) ) as studyFactorNms ,( SELECT STRING_AGG( DISTINCT eventProject.project_nm ,' | ' ) ) as associatedStudyTitles ,( SELECT STRING_AGG( distinct stressorTerm.nm || '^' || (select cd from object_type where id = stressorTerm.object_type_id ) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd ,'|' ) ) as stressorAgents ,( SELECT STRING_AGG( distinct COALESCE(receptorTerm.nm, '' ) || '^' || COALESCE( (select cd from object_type where id = receptorTerm.object_type_id ), '' ) || '^' || COALESCE( receptorTerm.nm_html, '' ) || '^' || COALESCE( receptorTerm.acc_txt, '' ) || '^' || COALESCE( receptorTerm.acc_db_cd, '' ) || '^' || receptor.description ,'|' ) ) as receptors ,( SELECT STRING_AGG( distinct country.nm,' | ' ) ) as studyCountries ,( SELECT STRING_AGG( distinct location.locality_txt,' | ' ) ) as localities ,( SELECT STRING_AGG( distinct event.medium_nm || '^' || COALESCE( event.medium_term_acc_txt, '' ),' | ' ) ) as assayMediums ,( SELECT STRING_AGG( distinct exposureMarkerTerm.nm || '^' || (select cd from object_type where id = exposureMarkerTerm.object_type_id ) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd ,'|' ) ) as assayedMarkers ,( SELECT STRING_AGG( distinct diseaseTerm.nm || '^' || (select cd from object_type where id = diseaseTerm.object_type_id ) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd ,'|' ) ) as diseases ,( SELECT STRING_AGG( distinct phenotypeTerm.nm || '^' || (select cd from object_type where id = phenotypeTerm.object_type_id ) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd ,'|' ) ) as phenotypes ,( SELECT STRING_AGG( distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|' ) ) as anatomyTerms ,re.author_summary summary ,COUNT(*) OVER() fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY ( ARRAY ( select reference_id from exposure e1 ,term t ,exp_event event1 where t.id = and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like ) and event1.id = e1.exp_event_id UNION select reference_id from exposure e1 ,term t ,exp_receptor r where t.id = and t.id = r.term_id and r.id = e1.exp_receptor_id ) ) group by e.reference_acc_txt ,r.abbr_authors_txt ,pub_start_yr ,re.author_summary order by stressorAgents LIMIT 50
Context: parallel worker
Statement: SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' ||Date: 2025-08-15 05:46:17
12 30 FATAL: canceling authentication due to timeout
Times Reported Most Frequent Error / Event #12
Day Hour Count Aug 12 06 18 Aug 13 05 12 13 21 ERROR: remaining connection slots are reserved for non-replication superuser connections ,stressorTerm.nm_html as chemNmHtml ,stressorTerm.nm_sort as chemNmSort ,stressorTerm.acc_txt as chemAcc ,(...) ) as stressorSrcTypeNm ,stressor.src_details as stressorSrcDetails ,stressor.sample_qty as stressorSampleQty ,stressor.note as stressorNote ,receptor.qty as nbrReceptors ,receptor.description as receptors ,receptor.note as receptorNotes ,receptorTerm.nm || '^' || (...) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms ,(...) ) as smokerStatus ,receptor.age as ageRange ,receptor.age_uom_nm as ageUOMNm ,receptor.age_qualifier_nm as ageQualifierNm ,receptor.gender_nm as genderNmSearch ,receptor.id receptorID ,(...) from exp_receptor_gender where exp_receptor_id = receptor.id ) as genderDetails ,(...) ) as receptorRace ,(...) ) as assayMethods ,event.medium_nm as medium ,event.medium_term_acc_txt as mediumAccTxt ,(...) ) as associatedStudyTitles ,event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr ,event.detection_limit as detectionLimit ,event.detection_limit_uom as detectionLimitUOM ,event.detection_freq as detectionFreq ,event.note as eventNote ,(...) ) as stateOrProvince ,(...) ) as localityTxt ,(...) ) as studyCountries ,exposureMarkerTerm.nm || '^' || (...) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers ,event.exp_marker_lvl as assayLevel ,assay_uom as measurement ,assay_measurement_stat as measurementStat ,assay_note as assayNote ,eiot.description as outcomeRltnp ,diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField ,phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField ,outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm ,e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,r.abbr_authors_txt as abbrAuthorsTxt ,(...) ) as studyFactorNms ,(...) ) as anatomyTerms ,outcome.note as outcomeNote ,eventLocation.exp_event_id as eventID ,COUNT(...) OVER() fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = or receptorTerm.id = GROUP BY chemNm ,chemNmHtml ,chemNmSort ,chemAcc ,stressorSrcDetails ,stressorSampleQty ,stressorNote ,receptorTerms ,medium ,mediumAccTxt ,assayedMarkers ,assayLevel ,measurement ,measurementStat ,assayNote ,outcomeRltnp ,diseaseField ,phenotypeField ,phenotypeActionDegreeTypeNm ,ref ,r.abbr_authors_txt ,collectionStartAndEndYr ,receptorID ,detectionLimit ,detectionLimitUOM ,detectionFreq ,eventNote ,outcomeNote ,eventID order by chemNmSort LIMIT 50
Times Reported Most Frequent Error / Event #13
Day Hour Count Aug 15 05 3 06 17 07 1 - ERROR: remaining connection slots are reserved for non-replication superuser connections ,stressorTerm.nm_html as chemNmHtml ,stressorTerm.nm_sort as chemNmSort ,stressorTerm.acc_txt as chemAcc ,( SELECT STRING_AGG( distinct stressorSrcType.nm || '^' || stressorSrcType.cd,'|' ) ) as stressorSrcTypeNm ,stressor.src_details as stressorSrcDetails ,stressor.sample_qty as stressorSampleQty ,stressor.note as stressorNote ,receptor.qty as nbrReceptors ,receptor.description as receptors ,receptor.note as receptorNotes ,receptorTerm.nm || '^' || (select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms ,( SELECT STRING_AGG( distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct,' | ' ) ) as smokerStatus ,receptor.age as ageRange ,receptor.age_uom_nm as ageUOMNm ,receptor.age_qualifier_nm as ageQualifierNm ,receptor.gender_nm as genderNmSearch ,receptor.id receptorID ,( SELECT STRING_AGG ( pct || '^' || gender_nm || '^' || gender_nm_html, '|' ) from exp_receptor_gender where exp_receptor_id = receptor.id ) as genderDetails ,( SELECT STRING_AGG( DISTINCT receptorRace.race_nm || '^' || receptorRace.pct,' | ' ) ) as receptorRace ,( SELECT STRING_AGG( DISTINCT eventAssayMethod.nm ,' | ' ) ) as assayMethods ,event.medium_nm as medium ,event.medium_term_acc_txt as mediumAccTxt ,( SELECT STRING_AGG( DISTINCT eventProject.project_nm ,' | ' ) ) as associatedStudyTitles ,event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr ,event.detection_limit as detectionLimit ,event.detection_limit_uom as detectionLimitUOM ,event.detection_freq as detectionFreq ,event.note as eventNote ,( SELECT STRING_AGG( DISTINCT eventLocation.geographic_region_nm,' | ' ) ) as stateOrProvince ,( SELECT STRING_AGG( DISTINCT eventLocation.locality_txt,' | ' ) ) as localityTxt ,( SELECT STRING_AGG( distinct country.nm,' | ' ) ) as studyCountries ,exposureMarkerTerm.nm || '^' || (select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers ,event.exp_marker_lvl as assayLevel ,assay_uom as measurement ,assay_measurement_stat as measurementStat ,assay_note as assayNote ,eiot.description as outcomeRltnp ,diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField ,phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField ,outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm ,e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,r.abbr_authors_txt as abbrAuthorsTxt ,( SELECT STRING_AGG( DISTINCT expStudyFactor.study_factor_nm,' | ' ) ) as studyFactorNms ,( SELECT STRING_AGG( distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|' ) ) as anatomyTerms ,outcome.note as outcomeNote ,eventLocation.exp_event_id as eventID ,COUNT(*) OVER() fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = or receptorTerm.id = GROUP BY chemNm ,chemNmHtml ,chemNmSort ,chemAcc ,stressorSrcDetails ,stressorSampleQty ,stressorNote ,receptorTerms ,medium ,mediumAccTxt ,assayedMarkers ,assayLevel ,measurement ,measurementStat ,assayNote ,outcomeRltnp ,diseaseField ,phenotypeField ,phenotypeActionDegreeTypeNm ,ref ,r.abbr_authors_txt ,collectionStartAndEndYr ,receptorID ,detectionLimit ,detectionLimitUOM ,detectionFreq ,eventNote ,outcomeNote ,eventID order by chemNmSort LIMIT 50
Context: parallel worker
Statement: SELECT DISTINCT stressorTerm.nm as chemNmDate: 2025-08-15 05:46:08
14 18 ERROR: remaining connection slots are reserved for non-replication superuser connections gt.nm gonm ,gt.nm_html gonmhtml ,gga.is_not isnot ,gt.acc_txt goacc ,gt.object_id goid ,d.abbr dagAbbr ,d.nm dagNm ,gga.gene_id geneid ,COUNT(...) annotCount ,COUNT(...) OVER() fullRowCount FROM gene_go_annot gga INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.gene_id = GROUP BY d.priority_seq ,gt.nm ,gt.nm_html ,gt.nm_sort ,d.nm ,d.abbr ,gga.is_not ,gt.acc_txt ,gt.object_id ,gga.gene_id ORDER BY d.abbr ,gt.nm_sort LIMIT 50
Times Reported Most Frequent Error / Event #14
Day Hour Count Aug 15 05 2 06 13 07 3 - ERROR: remaining connection slots are reserved for non-replication superuser connections gt.nm gonm ,gt.nm_html gonmhtml ,gga.is_not isnot ,gt.acc_txt goacc ,gt.object_id goid ,d.abbr dagAbbr ,d.nm dagNm ,gga.gene_id geneid ,COUNT(*) annotCount ,COUNT(*) OVER() fullRowCount FROM gene_go_annot gga INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.gene_id = GROUP BY d.priority_seq ,gt.nm ,gt.nm_html ,gt.nm_sort ,d.nm ,d.abbr ,gga.is_not ,gt.acc_txt ,gt.object_id ,gga.gene_id ORDER BY d.abbr ,gt.nm_sort LIMIT 50
Context: parallel worker
Statement: SELECT /* GeneGODAO */Date: 2025-08-15 05:47:26
15 10 ERROR: remaining connection slots are reserved for non-replication superuser connections FROM (...) OVER() fullRowCount FROM term g WHERE g.id IN (...) OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50
Times Reported Most Frequent Error / Event #15
Day Hour Count Aug 15 05 1 06 9 - ERROR: remaining connection slots are reserved for non-replication superuser connections FROM ( SELECT g.nm genesymbol ,g.nm_sort genesymbolsort ,g.acc_txt geneacc ,g.acc_db_cd geneaccdbcd ,g.id geneid ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = ) OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50
Context: parallel worker
Statement: SELECT /* TaxonGenesDAO */ *Date: 2025-08-15 05:46:29
16 8 LOG: could not receive data from client: Connection reset by peer
Times Reported Most Frequent Error / Event #16
Day Hour Count Aug 11 18 2 Aug 12 08 2 10 1 Aug 13 05 2 Aug 16 13 1 17 8 ERROR: remaining connection slots are reserved for non-replication superuser connections r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,(...) ) as studyFactorNms ,(...) ) as associatedStudyTitles ,(...) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd ,'|' ) ) as stressorAgents ,(...) || '^' || COALESCE(...), '' ) || '^' || COALESCE(...) || '^' || COALESCE(...) || '^' || COALESCE(...) || '^' || receptor.description ,'|' ) ) as receptors ,(...) ) as studyCountries ,(...) ) as localities ,(...),' | ' ) ) as assayMediums ,(...) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd ,'|' ) ) as assayedMarkers ,(...) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd ,'|' ) ) as diseases ,(...) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd ,'|' ) ) as phenotypes ,(...) ) as anatomyTerms ,re.author_summary summary ,COUNT(...) OVER() fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (...) and disease.id = o1.disease_id and o1.id = e1.exp_outcome_id UNION select reference_id from exposure e1 ,term t ,exp_receptor r where t.id in (...) and t.id = r.term_id and r.id = e1.exp_receptor_id ) ) group by e.reference_acc_txt ,r.abbr_authors_txt ,pub_start_yr ,re.author_summary order by stressorAgents LIMIT 50
Times Reported Most Frequent Error / Event #17
Day Hour Count Aug 15 06 8 - ERROR: remaining connection slots are reserved for non-replication superuser connections r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,( SELECT STRING_AGG( DISTINCT expStudyFactor.study_factor_nm,' | ' ) ) as studyFactorNms ,( SELECT STRING_AGG( DISTINCT eventProject.project_nm ,' | ' ) ) as associatedStudyTitles ,( SELECT STRING_AGG( distinct stressorTerm.nm || '^' || (select cd from object_type where id = stressorTerm.object_type_id ) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd ,'|' ) ) as stressorAgents ,( SELECT STRING_AGG( distinct COALESCE(receptorTerm.nm, '' ) || '^' || COALESCE( (select cd from object_type where id = receptorTerm.object_type_id ), '' ) || '^' || COALESCE( receptorTerm.nm_html, '' ) || '^' || COALESCE( receptorTerm.acc_txt, '' ) || '^' || COALESCE( receptorTerm.acc_db_cd, '' ) || '^' || receptor.description ,'|' ) ) as receptors ,( SELECT STRING_AGG( distinct country.nm,' | ' ) ) as studyCountries ,( SELECT STRING_AGG( distinct location.locality_txt,' | ' ) ) as localities ,( SELECT STRING_AGG( distinct event.medium_nm || '^' || COALESCE( event.medium_term_acc_txt, '' ),' | ' ) ) as assayMediums ,( SELECT STRING_AGG( distinct exposureMarkerTerm.nm || '^' || (select cd from object_type where id = exposureMarkerTerm.object_type_id ) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd ,'|' ) ) as assayedMarkers ,( SELECT STRING_AGG( distinct diseaseTerm.nm || '^' || (select cd from object_type where id = diseaseTerm.object_type_id ) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd ,'|' ) ) as diseases ,( SELECT STRING_AGG( distinct phenotypeTerm.nm || '^' || (select cd from object_type where id = phenotypeTerm.object_type_id ) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd ,'|' ) ) as phenotypes ,( SELECT STRING_AGG( distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|' ) ) as anatomyTerms ,re.author_summary summary ,COUNT(*) OVER() fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY ( ARRAY (select reference_id from exposure e1 ,term disease ,exp_outcome o1 where disease.id in ( select descendant_object_id from dag_path where ancestor_object_id = ) and disease.id = o1.disease_id and o1.id = e1.exp_outcome_id UNION select reference_id from exposure e1 ,term t ,exp_receptor r where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = ) and t.id = r.term_id and r.id = e1.exp_receptor_id ) ) group by e.reference_acc_txt ,r.abbr_authors_txt ,pub_start_yr ,re.author_summary order by stressorAgents LIMIT 50
Context: parallel worker
Statement: SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' ||Date: 2025-08-15 06:32:16
18 7 ERROR: remaining connection slots are reserved for non-replication superuser connections g.nm geneSymbol ,g.id geneId ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,COUNT(...) ixnCount ,COUNT(...) taxonCount ,COUNT(...) OVER() fullRowCount FROM gene_chem_reference gcr INNER JOIN term g ON gcr.gene_id = g.id WHERE gcr.chem_id IN(...) GROUP BY g.nm ,g.id ,g.acc_txt ,g.acc_db_cd ,g.nm_sort ORDER BY COUNT(...) DESC ,g.nm_sort LIMIT 50
Times Reported Most Frequent Error / Event #18
Day Hour Count Aug 15 06 7 - ERROR: remaining connection slots are reserved for non-replication superuser connections g.nm geneSymbol ,g.id geneId ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,COUNT(gcr.ixn_id) ixnCount ,COUNT(DISTINCT gcr.taxon_id) taxonCount ,COUNT(*) OVER() fullRowCount FROM gene_chem_reference gcr INNER JOIN term g ON gcr.gene_id = g.id WHERE gcr.chem_id IN(SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = ) GROUP BY g.nm ,g.id ,g.acc_txt ,g.acc_db_cd ,g.nm_sort ORDER BY COUNT(gcr.ixn_id) DESC ,g.nm_sort LIMIT 50
Context: parallel worker
Statement: SELECT /* ChemGenesDAO */Date: 2025-08-15 06:03:03
19 5 ERROR: remaining connection slots are reserved for non-replication superuser connections FROM gene_disease gd WHERE gd.disease_id IN (...)
Times Reported Most Frequent Error / Event #19
Day Hour Count Aug 15 06 5 - ERROR: remaining connection slots are reserved for non-replication superuser connections FROM gene_disease gd WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = )
Context: parallel worker
Statement: SELECT /* DiseaseGeneAssnsDAO.rowCount */ COUNT(*)Date: 2025-08-15 06:03:02
20 5 ERROR: remaining connection slots are reserved for non-replication superuser connections r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,(...) ) as studyFactorNms ,(...) ) as associatedStudyTitles ,(...) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd ,'|' ) ) as stressorAgents ,(...) || '^' || COALESCE(...), '' ) || '^' || COALESCE(...) || '^' || COALESCE(...) || '^' || COALESCE(...) || '^' || receptor.description ,'|' ) ) as receptors ,(...) ) as studyCountries ,(...) ) as localities ,(...),' | ' ) ) as assayMediums ,(...) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd ,'|' ) ) as assayedMarkers ,(...) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd ,'|' ) ) as diseases ,(...) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd ,'|' ) ) as phenotypes ,(...) ) as anatomyTerms ,re.author_summary summary ,COUNT(...) OVER() fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (...) and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1 ,term t ,exp_event event1 where t.id in (...) and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in (...) and event1.id = e1.exp_event_id ) ) group by e.reference_acc_txt ,r.abbr_authors_txt ,pub_start_yr ,re.author_summary order by stressorAgents LIMIT 50
Times Reported Most Frequent Error / Event #20
Day Hour Count Aug 15 05 1 06 4 - ERROR: remaining connection slots are reserved for non-replication superuser connections r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,( SELECT STRING_AGG( DISTINCT expStudyFactor.study_factor_nm,' | ' ) ) as studyFactorNms ,( SELECT STRING_AGG( DISTINCT eventProject.project_nm ,' | ' ) ) as associatedStudyTitles ,( SELECT STRING_AGG( distinct stressorTerm.nm || '^' || (select cd from object_type where id = stressorTerm.object_type_id ) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd ,'|' ) ) as stressorAgents ,( SELECT STRING_AGG( distinct COALESCE(receptorTerm.nm, '' ) || '^' || COALESCE( (select cd from object_type where id = receptorTerm.object_type_id ), '' ) || '^' || COALESCE( receptorTerm.nm_html, '' ) || '^' || COALESCE( receptorTerm.acc_txt, '' ) || '^' || COALESCE( receptorTerm.acc_db_cd, '' ) || '^' || receptor.description ,'|' ) ) as receptors ,( SELECT STRING_AGG( distinct country.nm,' | ' ) ) as studyCountries ,( SELECT STRING_AGG( distinct location.locality_txt,' | ' ) ) as localities ,( SELECT STRING_AGG( distinct event.medium_nm || '^' || COALESCE( event.medium_term_acc_txt, '' ),' | ' ) ) as assayMediums ,( SELECT STRING_AGG( distinct exposureMarkerTerm.nm || '^' || (select cd from object_type where id = exposureMarkerTerm.object_type_id ) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd ,'|' ) ) as assayedMarkers ,( SELECT STRING_AGG( distinct diseaseTerm.nm || '^' || (select cd from object_type where id = diseaseTerm.object_type_id ) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd ,'|' ) ) as diseases ,( SELECT STRING_AGG( distinct phenotypeTerm.nm || '^' || (select cd from object_type where id = phenotypeTerm.object_type_id ) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd ,'|' ) ) as phenotypes ,( SELECT STRING_AGG( distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|' ) ) as anatomyTerms ,re.author_summary summary ,COUNT(*) OVER() fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY ( ARRAY ( select reference_id from exposure e1 ,term chem ,exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = ) and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1 ,term t ,exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = ) and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like ) and event1.id = e1.exp_event_id ) ) group by e.reference_acc_txt ,r.abbr_authors_txt ,pub_start_yr ,re.author_summary order by stressorAgents LIMIT 50
Context: parallel worker
Statement: SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' ||Date: 2025-08-15 05:46:23
21 4 ERROR: remaining connection slots are reserved for non-replication superuser connections r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,(...) ) as studyFactorNms ,(...) ) as associatedStudyTitles ,(...) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd ,'|' ) ) as stressorAgents ,(...) || '^' || COALESCE(...), '' ) || '^' || COALESCE(...) || '^' || COALESCE(...) || '^' || COALESCE(...) || '^' || receptor.description ,'|' ) ) as receptors ,(...) ) as studyCountries ,(...) ) as localities ,(...),' | ' ) ) as assayMediums ,(...) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd ,'|' ) ) as assayedMarkers ,(...) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd ,'|' ) ) as diseases ,(...) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd ,'|' ) ) as phenotypes ,(...) ) as anatomyTerms ,re.author_summary summary ,COUNT(...) OVER() fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (...) and goTerm.id = o1.phenotype_id and o1.id = e1.exp_outcome_id UNION select reference_id from exposure e1 ,term t ,exp_receptor r where t.id in (...) and t.id = r.term_id and r.id = e1.exp_receptor_id ) ) group by e.reference_acc_txt ,r.abbr_authors_txt ,pub_start_yr ,re.author_summary order by stressorAgents LIMIT 50
Times Reported Most Frequent Error / Event #21
Day Hour Count Aug 15 06 3 07 1 - ERROR: remaining connection slots are reserved for non-replication superuser connections r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,( SELECT STRING_AGG( DISTINCT expStudyFactor.study_factor_nm,' | ' ) ) as studyFactorNms ,( SELECT STRING_AGG( DISTINCT eventProject.project_nm ,' | ' ) ) as associatedStudyTitles ,( SELECT STRING_AGG( distinct stressorTerm.nm || '^' || (select cd from object_type where id = stressorTerm.object_type_id ) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd ,'|' ) ) as stressorAgents ,( SELECT STRING_AGG( distinct COALESCE(receptorTerm.nm, '' ) || '^' || COALESCE( (select cd from object_type where id = receptorTerm.object_type_id ), '' ) || '^' || COALESCE( receptorTerm.nm_html, '' ) || '^' || COALESCE( receptorTerm.acc_txt, '' ) || '^' || COALESCE( receptorTerm.acc_db_cd, '' ) || '^' || receptor.description ,'|' ) ) as receptors ,( SELECT STRING_AGG( distinct country.nm,' | ' ) ) as studyCountries ,( SELECT STRING_AGG( distinct location.locality_txt,' | ' ) ) as localities ,( SELECT STRING_AGG( distinct event.medium_nm || '^' || COALESCE( event.medium_term_acc_txt, '' ),' | ' ) ) as assayMediums ,( SELECT STRING_AGG( distinct exposureMarkerTerm.nm || '^' || (select cd from object_type where id = exposureMarkerTerm.object_type_id ) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd ,'|' ) ) as assayedMarkers ,( SELECT STRING_AGG( distinct diseaseTerm.nm || '^' || (select cd from object_type where id = diseaseTerm.object_type_id ) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd ,'|' ) ) as diseases ,( SELECT STRING_AGG( distinct phenotypeTerm.nm || '^' || (select cd from object_type where id = phenotypeTerm.object_type_id ) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd ,'|' ) ) as phenotypes ,( SELECT STRING_AGG( distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|' ) ) as anatomyTerms ,re.author_summary summary ,COUNT(*) OVER() fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY ( ARRAY ( select reference_id from exposure e1 ,term goTerm ,exp_outcome o1 where goTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ) and goTerm.id = o1.phenotype_id and o1.id = e1.exp_outcome_id UNION select reference_id from exposure e1 ,term t ,exp_receptor r where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = ) and t.id = r.term_id and r.id = e1.exp_receptor_id ) ) group by e.reference_acc_txt ,r.abbr_authors_txt ,pub_start_yr ,re.author_summary order by stressorAgents LIMIT 50
Context: parallel worker
Statement: SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' ||Date: 2025-08-15 06:29:00
22 4 ERROR: remaining connection slots are reserved for non-replication superuser connections c.id ,c.nm ,c.nm_html nmHtml ,c.acc_txt acc ,c.has_genes hasGenes ,c.has_diseases hasDiseases ,c.has_exposures hasExposures ,c.has_phenotypes hasPhenotypes FROM term c WHERE c.id IN(...) UNION ALL SELECT term_id FROM phenotype_term_reference ptr WHERE ptr.reference_id = and ptr.term_object_type_id = 2) ORDER BY c.nm_sort
Times Reported Most Frequent Error / Event #22
Day Hour Count Aug 15 06 4 - ERROR: remaining connection slots are reserved for non-replication superuser connections c.id ,c.nm ,c.nm_html nmHtml ,c.acc_txt acc ,c.has_genes hasGenes ,c.has_diseases hasDiseases ,c.has_exposures hasExposures ,c.has_phenotypes hasPhenotypes FROM term c WHERE c.id IN( SELECT cdr.chem_id FROM chem_disease_reference cdr WHERE cdr.reference_id = AND cdr.source_cd = 'C' UNION ALL SELECT gcr.chem_id FROM gene_chem_reference gcr WHERE gcr.reference_id = UNION ALL select stressor.chem_id from exposure e ,exp_stressor stressor where e.reference_id = and e.exp_stressor_id = stressor.id UNION ALL select event.exp_marker_term_id from exposure e ,exp_event event where e.reference_id = and e.exp_event_id = event.id and event.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%' ) UNION ALL SELECT term_id FROM phenotype_term_reference ptr WHERE ptr.reference_id = and ptr.term_object_type_id = 2) ORDER BY c.nm_sort
Context: parallel worker
Statement: SELECT /* ReferenceCitedChemsDAO */Date: 2025-08-15 06:03:45
23 3 ERROR: remaining connection slots are reserved for non-replication superuser connections FROM chem_disease cd WHERE cd.chem_id IN (...)
Times Reported Most Frequent Error / Event #23
Day Hour Count Aug 15 06 2 07 1 - ERROR: remaining connection slots are reserved for non-replication superuser connections FROM chem_disease cd WHERE cd.chem_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = )
Context: parallel worker
Statement: SELECT /* ChemDiseaseAssnsDAO.rowCount */ COUNT(*)Date: 2025-08-15 06:13:23
24 3 ERROR: remaining connection slots are reserved for non-replication superuser connections associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm ,associatedTerm.id associatedTermId ,ptr.ixn_id ixnId ,associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort ,COALESCE(...) casRN ,phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype ,phenotypeTerm.id phenotypeId ,(...) ,'|' ) ) as taxonTerms ,(...) ) as anatomyTerms ,COUNT(...) taxonCount ,i.ixn_prose_html ixnProseHtml ,i.ixn_prose_txt ixnProse ,i.sort_txt ixnSort ,(...) ) as references ,COUNT(...) refCount ,pt.indirect_term_qty inferredCount ,COUNT(...) OVER() fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.ixn_id = ANY (...) ) ) ) and ptr.term_object_type_id =2 group by associatedTerm ,associatedTermNmSort ,phenotype ,casRN ,ixnId ,ixnProseHtml ,ixnProse ,ixnSort ,associatedTermId ,phenotypeId ,inferredCount ORDER BY associatedTermNmSort LIMIT 50
Times Reported Most Frequent Error / Event #24
Day Hour Count Aug 15 06 3 - ERROR: remaining connection slots are reserved for non-replication superuser connections associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm ,associatedTerm.id associatedTermId ,ptr.ixn_id ixnId ,associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort ,COALESCE( associatedTerm.secondary_nm, '' ) casRN ,phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype ,phenotypeTerm.id phenotypeId ,( SELECT STRING_AGG( distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE( taxonTerm.secondary_nm, '' ) ,'|' ) ) as taxonTerms ,( SELECT STRING_AGG( distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|' ) ) as anatomyTerms ,COUNT(DISTINCT taxonTerm.nm) taxonCount ,i.ixn_prose_html ixnProseHtml ,i.ixn_prose_txt ixnProse ,i.sort_txt ixnSort ,( SELECT STRING_AGG( distinct r.acc_txt,'|' ) ) as references ,COUNT(DISTINCT ptr.reference_id) refCount ,pt.indirect_term_qty inferredCount ,COUNT(*) OVER() fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.ixn_id = ANY ( ARRAY ( ( select ixn_id from ixn_anatomy where anatomy_id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = ) ) ) ) and ptr.term_object_type_id =2 group by associatedTerm ,associatedTermNmSort ,phenotype ,casRN ,ixnId ,ixnProseHtml ,ixnProse ,ixnSort ,associatedTermId ,phenotypeId ,inferredCount ORDER BY associatedTermNmSort LIMIT 50
Context: parallel worker
Statement: select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' ||Date: 2025-08-15 06:08:35
25 3 ERROR: remaining connection slots are reserved for non-replication superuser connections d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (...) FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (...) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort LIMIT 50
Times Reported Most Frequent Error / Event #25
Day Hour Count Aug 15 06 3 - ERROR: remaining connection slots are reserved for non-replication superuser connections d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = ) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort LIMIT 50
Context: parallel worker
Statement: SELECT /* DiseaseGeneAssnsDAO */Date: 2025-08-15 06:03:03
26 2 ERROR: remaining connection slots are reserved for non-replication superuser connections FROM chem_disease cd WHERE cd.disease_id IN (...)
Times Reported Most Frequent Error / Event #26
Day Hour Count Aug 15 06 1 07 1 - ERROR: remaining connection slots are reserved for non-replication superuser connections FROM chem_disease cd WHERE cd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = )
Context: parallel worker
Statement: SELECT /* ChemDiseaseAssnsDAO.rowCount */ COUNT(*)Date: 2025-08-15 06:07:13
27 2 ERROR: syntax error at or near "..."
Times Reported Most Frequent Error / Event #27
Day Hour Count Aug 16 20 2 - ERROR: syntax error at or near ")" at character 4810
Statement: select distinct e.reference_acc_txt as "Reference", pref.abbr_authors_txt as "Author", referenceExp.author_summary as "AuthorSummary", (Select STRING_AGG( distinct eventproject.project_nm, '|')) as "AssociatedStudyTitles", eevent.collection_start_yr as "EnrollmentStartYear", eevent.collection_end_yr as "EnrollmentEndYear", (Select STRING_AGG( distinct studyFactor.nm, '|')) as "StudyFactors", (Select STRING_AGG(distinct stressorSrcType.nm, '|')) as "StressorSourceCategory", stressor.chem_term_nm as "ExposureStressorName", stressor.src_details as "StressorSourceDetails", stressor.sample_qty as "NumberOfStressorSamples", stressor.note as "StressorNotes", ereceptor.qty as "NumberOfReceptors", ereceptor.description as "Receptors", ereceptor.term_nm as "ReceptorDescription", ereceptor.term_acc_txt as "ReceptorID", ereceptor.note as "ReceptorNotes", (Select STRING_AGG(distinct COALESCE( COALESCE(NULLIF(CAST(receptorTobaccoUse.pct as int),0)) || '% ' || tobaccoUse.nm, COALESCE(COALESCE(NULLIF(CAST(receptorTobaccoUse.pct as int),0)) || '% ' , tobaccoUse.nm)), '|')) as "SmokingStatus", ereceptor.age || ' ' || age_uom.nm as "Age", age_qualifier.nm as "AgeQualifier", (Select STRING_AGG(distinct COALESCE( COALESCE(NULLIF(CAST(pct as int),0)) || '% ' || gender.nm, COALESCE(COALESCE(NULLIF(CAST(pct as int),0)) || '% ' , gender.nm)), '|') from exp_receptor_gender expgender left outer join gender on expgender.gender_id=gender.id where exp_receptor_id = ereceptor.id ) as "Sex", (Select STRING_AGG(distinct COALESCE( COALESCE(NULLIF(CAST(receptorRace.pct as int),0)) || '% ' || race.nm, COALESCE(COALESCE(NULLIF(CAST(receptorRace.pct as int),0)) || '% ' , race.nm)), '|')) as "Race", (Select STRING_AGG( distinct eventAssayMethod.nm, '|')) as "Methods" , eevent.detection_limit as "DetectionLimit", eevent.detection_limit_uom as "DetectionLimitUnitsOfMeasurement", eevent.detection_freq as "DetectionFrequency", emedium.nm as "Medium", eevent.exp_marker_term_nm as "ExposureMarker", eevent.exp_marker_lvl as "MarkerLevel", eevent.assay_uom as "MarkerUnitsOfMeasurement", eevent.assay_measurement_stat as "MarkerMeasurementStatistic", eevent.assay_note as "AssayNotes", (Select STRING_AGG( distinct country.nm, '|')) as "StudyCountries", (Select STRING_AGG( distinct eventLocation.geographic_region_nm, '|')) as "StateOrProvince", (Select STRING_AGG( distinct eventLocation.locality_txt, '|')) as "CityTownRegionOrArea", eevent.note as "ExposureEventNotes", eiot.description as "OutcomeRelationship", outcome.disease_term_nm as "DiseaseName", outcome.phenotype_action_degree_type_nm as "PhenotypeActionDegreeType", outcome.phenotype_term_nm as "PhenotypeName", (Select STRING_AGG( distinct expAnatomy.anatomy_term_nm, '|')) as "Anatomy", outcome.note as "ExposureOutcomeNotes" from exposure e left outer join reference pref on pref.acc_txt = e.reference_acc_txt left outer join reference_exp referenceExp on referenceExp.reference_acc_txt = e.reference_acc_txt left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id left outer join study_factor studyFactor on studyFactor.id = expStudyFactor.study_factor_id left outer join exp_event_project eventproject on eventproject.exp_event_id = e.exp_event_id inner join exp_stressor stressor on e.exp_stressor_id = stressor.id left outer join exp_receptor ereceptor on e.exp_receptor_id = ereceptor.id left outer join age_uom age_uom on ereceptor.age_uom_id = age_uom.id left outer join age_qualifier age_qualifier on ereceptor.age_qualifier_id = age_qualifier.id left outer join exp_event eevent on e.exp_event_id = eevent.id left outer join medium emedium on eevent.medium_id = emedium.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType on esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse on ereceptor.id = receptorTobaccoUse.exp_receptor_id left outer join tobacco_use tobaccoUse on receptorTobaccoUse.tobacco_use_id = tobaccoUse.id left outer join exp_receptor_race receptorRace on ereceptor.id = receptorRace.exp_receptor_id left outer join race race on receptorRace.race_id = race.id left outer join exp_event_location eventLocation on eevent.id = eventLocation.exp_event_id left outer join country on eventLocation.country_id = country.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join exp_anatomy expAnatomy on outcome.id = expAnatomy.exp_outcome_id left outer join exp_event_assay_method eventAssayMethod on eevent.id = eventAssayMethod.exp_event_id where ereceptor.term_acc_txt in (select acc_txt from term where id in )) or eevent.exp_marker_acc_txt in (select acc_txt from term where id in )) group by "Reference", "Author", "AuthorSummary", "EnrollmentStartYear", "EnrollmentEndYear", "ExposureStressorName", "StressorSourceDetails", "NumberOfStressorSamples", "StressorNotes", "NumberOfReceptors", "Receptors", "ReceptorDescription", "ReceptorID", "ReceptorNotes", "Age", "AgeQualifier", "DetectionLimit", "DetectionLimitUnitsOfMeasurement", "DetectionFrequency", "Medium", "ExposureMarker", "MarkerLevel", "MarkerUnitsOfMeasurement", "MarkerMeasurementStatistic", "AssayNotes", "ExposureEventNotes", "OutcomeRelationship", "DiseaseName", "PhenotypeActionDegreeType", "PhenotypeName", "ExposureOutcomeNotes", ereceptor.id, eventLocation.exp_event_id ;
Date: 2025-08-16 20:08:21 Database: ctdprd51 Application: User: pubeu Remote:
28 2 ERROR: ) T
Times Reported Most Frequent Error / Event #28
Day Hour Count Aug 14 16 1 Aug 15 08 1 29 2 ERROR: remaining connection slots are reserved for non-replication superuser connections c.nm chemnm ,c.nm_html chemnmhtml ,c.acc_txt chemacc ,c.secondary_nm casRN ,c.id chemid ,d.nm diseasenm ,d.acc_txt diseaseacc ,d.acc_db_cd diseaseaccdbcd ,d.id diseaseid ,cd.network_score networkscore ,cd.indirect_gene_qty inferredcount ,cd.reference_qty referencecount ,cd.exposure_reference_qty exposureReferenceCount ,CASE WHEN cd.curated_reference_qty > 0 THEN (...) FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.chem_id IN (...) ORDER BY actionTypes ,cd.network_score DESC NULLS LAST ,d.nm_sort ,c.nm_sort LIMIT 50
Times Reported Most Frequent Error / Event #29
Day Hour Count Aug 15 06 2 - ERROR: remaining connection slots are reserved for non-replication superuser connections c.nm chemnm ,c.nm_html chemnmhtml ,c.acc_txt chemacc ,c.secondary_nm casRN ,c.id chemid ,d.nm diseasenm ,d.acc_txt diseaseacc ,d.acc_db_cd diseaseaccdbcd ,d.id diseaseid ,cd.network_score networkscore ,cd.indirect_gene_qty inferredcount ,cd.reference_qty referencecount ,cd.exposure_reference_qty exposureReferenceCount ,CASE WHEN cd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.chem_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = ) ORDER BY actionTypes ,cd.network_score DESC NULLS LAST ,d.nm_sort ,c.nm_sort LIMIT 50
Context: parallel worker
Statement: SELECT /* ChemDiseaseAssnsDAO */Date: 2025-08-15 06:25:09
30 2 ERROR: remaining connection slots are reserved for non-replication superuser connections ,stressorTerm.nm_html as chemNmHtml ,stressorTerm.nm_sort as chemNmSort ,stressorTerm.acc_txt as chemAcc ,(...) ) as stressorSrcTypeNm ,stressor.src_details as stressorSrcDetails ,stressor.sample_qty as stressorSampleQty ,stressor.note as stressorNote ,receptor.qty as nbrReceptors ,receptor.description as receptors ,receptor.note as receptorNotes ,receptorTerm.nm || '^' || (...) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms ,(...) ) as smokerStatus ,receptor.age as ageRange ,receptor.age_uom_nm as ageUOMNm ,receptor.age_qualifier_nm as ageQualifierNm ,receptor.gender_nm as genderNmSearch ,receptor.id receptorID ,(...) from exp_receptor_gender where exp_receptor_id = receptor.id ) as genderDetails ,(...) ) as receptorRace ,(...) ) as assayMethods ,event.medium_nm as medium ,event.medium_term_acc_txt as mediumAccTxt ,(...) ) as associatedStudyTitles ,event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr ,event.detection_limit as detectionLimit ,event.detection_limit_uom as detectionLimitUOM ,event.detection_freq as detectionFreq ,event.note as eventNote ,(...) ) as stateOrProvince ,(...) ) as localityTxt ,(...) ) as studyCountries ,exposureMarkerTerm.nm || '^' || (...) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers ,event.exp_marker_lvl as assayLevel ,assay_uom as measurement ,assay_measurement_stat as measurementStat ,assay_note as assayNote ,eiot.description as outcomeRltnp ,diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField ,phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField ,outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm ,e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,r.abbr_authors_txt as abbrAuthorsTxt ,(...) ) as studyFactorNms ,(...) ) as anatomyTerms ,outcome.note as outcomeNote ,eventLocation.exp_event_id as eventID ,COUNT(...) OVER() fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where stressorTerm.id in (...) or exposureMarkerTerm.id in (...) GROUP BY chemNm ,chemNmHtml ,chemNmSort ,chemAcc ,stressorSrcDetails ,stressorSampleQty ,stressorNote ,receptorTerms ,medium ,mediumAccTxt ,assayedMarkers ,assayLevel ,measurement ,measurementStat ,assayNote ,outcomeRltnp ,diseaseField ,phenotypeField ,phenotypeActionDegreeTypeNm ,ref ,r.abbr_authors_txt ,collectionStartAndEndYr ,receptorID ,detectionLimit ,detectionLimitUOM ,detectionFreq ,eventNote ,outcomeNote ,eventID order by chemNmSort LIMIT 50
Times Reported Most Frequent Error / Event #30
Day Hour Count Aug 15 05 1 06 1 - ERROR: remaining connection slots are reserved for non-replication superuser connections ,stressorTerm.nm_html as chemNmHtml ,stressorTerm.nm_sort as chemNmSort ,stressorTerm.acc_txt as chemAcc ,( SELECT STRING_AGG( distinct stressorSrcType.nm || '^' || stressorSrcType.cd,'|' ) ) as stressorSrcTypeNm ,stressor.src_details as stressorSrcDetails ,stressor.sample_qty as stressorSampleQty ,stressor.note as stressorNote ,receptor.qty as nbrReceptors ,receptor.description as receptors ,receptor.note as receptorNotes ,receptorTerm.nm || '^' || (select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms ,( SELECT STRING_AGG( distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct,' | ' ) ) as smokerStatus ,receptor.age as ageRange ,receptor.age_uom_nm as ageUOMNm ,receptor.age_qualifier_nm as ageQualifierNm ,receptor.gender_nm as genderNmSearch ,receptor.id receptorID ,( SELECT STRING_AGG ( pct || '^' || gender_nm || '^' || gender_nm_html, '|' ) from exp_receptor_gender where exp_receptor_id = receptor.id ) as genderDetails ,( SELECT STRING_AGG( DISTINCT receptorRace.race_nm || '^' || receptorRace.pct,' | ' ) ) as receptorRace ,( SELECT STRING_AGG( DISTINCT eventAssayMethod.nm ,' | ' ) ) as assayMethods ,event.medium_nm as medium ,event.medium_term_acc_txt as mediumAccTxt ,( SELECT STRING_AGG( DISTINCT eventProject.project_nm ,' | ' ) ) as associatedStudyTitles ,event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr ,event.detection_limit as detectionLimit ,event.detection_limit_uom as detectionLimitUOM ,event.detection_freq as detectionFreq ,event.note as eventNote ,( SELECT STRING_AGG( DISTINCT eventLocation.geographic_region_nm,' | ' ) ) as stateOrProvince ,( SELECT STRING_AGG( DISTINCT eventLocation.locality_txt,' | ' ) ) as localityTxt ,( SELECT STRING_AGG( distinct country.nm,' | ' ) ) as studyCountries ,exposureMarkerTerm.nm || '^' || (select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers ,event.exp_marker_lvl as assayLevel ,assay_uom as measurement ,assay_measurement_stat as measurementStat ,assay_note as assayNote ,eiot.description as outcomeRltnp ,diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField ,phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField ,outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm ,e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,r.abbr_authors_txt as abbrAuthorsTxt ,( SELECT STRING_AGG( DISTINCT expStudyFactor.study_factor_nm,' | ' ) ) as studyFactorNms ,( SELECT STRING_AGG( distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|' ) ) as anatomyTerms ,outcome.note as outcomeNote ,eventLocation.exp_event_id as eventID ,COUNT(*) OVER() fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where stressorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ) or exposureMarkerTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ) GROUP BY chemNm ,chemNmHtml ,chemNmSort ,chemAcc ,stressorSrcDetails ,stressorSampleQty ,stressorNote ,receptorTerms ,medium ,mediumAccTxt ,assayedMarkers ,assayLevel ,measurement ,measurementStat ,assayNote ,outcomeRltnp ,diseaseField ,phenotypeField ,phenotypeActionDegreeTypeNm ,ref ,r.abbr_authors_txt ,collectionStartAndEndYr ,receptorID ,detectionLimit ,detectionLimitUOM ,detectionFreq ,eventNote ,outcomeNote ,eventID order by chemNmSort LIMIT 50
Context: parallel worker
Statement: SELECT DISTINCT stressorTerm.nm as chemNmDate: 2025-08-15 05:46:09
31 2 ERROR: remaining connection slots are reserved for non-replication superuser connections r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,(...) ) as studyFactorNms ,(...) ) as associatedStudyTitles ,(...) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd ,'|' ) ) as stressorAgents ,(...) || '^' || COALESCE(...), '' ) || '^' || COALESCE(...) || '^' || COALESCE(...) || '^' || COALESCE(...) || '^' || receptor.description ,'|' ) ) as receptors ,(...) ) as studyCountries ,(...) ) as localities ,(...),' | ' ) ) as assayMediums ,(...) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd ,'|' ) ) as assayedMarkers ,(...) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd ,'|' ) ) as diseases ,(...) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd ,'|' ) ) as phenotypes ,(...) ) as anatomyTerms ,re.author_summary summary ,COUNT(...) OVER() fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (...) ) and a1.exp_outcome_id = e1.exp_outcome_id UNION select reference_id from exposure e2 ,exp_event ee ,medium m ,term anatomyTerm where e2.exp_event_id = ee.id and ee.medium_id = m.id and m.term_acc_txt = anatomyTerm.acc_txt and m.term_object_type_id = anatomyTerm.object_type_id and anatomyTerm.id = ANY (...) ) ) ) group by e.reference_acc_txt ,r.abbr_authors_txt ,pub_start_yr ,re.author_summary order by stressorAgents LIMIT 50
Times Reported Most Frequent Error / Event #31
Day Hour Count Aug 15 06 2 - ERROR: remaining connection slots are reserved for non-replication superuser connections r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,( SELECT STRING_AGG( DISTINCT expStudyFactor.study_factor_nm,' | ' ) ) as studyFactorNms ,( SELECT STRING_AGG( DISTINCT eventProject.project_nm ,' | ' ) ) as associatedStudyTitles ,( SELECT STRING_AGG( distinct stressorTerm.nm || '^' || (select cd from object_type where id = stressorTerm.object_type_id ) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd ,'|' ) ) as stressorAgents ,( SELECT STRING_AGG( distinct COALESCE(receptorTerm.nm, '' ) || '^' || COALESCE( (select cd from object_type where id = receptorTerm.object_type_id ), '' ) || '^' || COALESCE( receptorTerm.nm_html, '' ) || '^' || COALESCE( receptorTerm.acc_txt, '' ) || '^' || COALESCE( receptorTerm.acc_db_cd, '' ) || '^' || receptor.description ,'|' ) ) as receptors ,( SELECT STRING_AGG( distinct country.nm,' | ' ) ) as studyCountries ,( SELECT STRING_AGG( distinct location.locality_txt,' | ' ) ) as localities ,( SELECT STRING_AGG( distinct event.medium_nm || '^' || COALESCE( event.medium_term_acc_txt, '' ),' | ' ) ) as assayMediums ,( SELECT STRING_AGG( distinct exposureMarkerTerm.nm || '^' || (select cd from object_type where id = exposureMarkerTerm.object_type_id ) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd ,'|' ) ) as assayedMarkers ,( SELECT STRING_AGG( distinct diseaseTerm.nm || '^' || (select cd from object_type where id = diseaseTerm.object_type_id ) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd ,'|' ) ) as diseases ,( SELECT STRING_AGG( distinct phenotypeTerm.nm || '^' || (select cd from object_type where id = phenotypeTerm.object_type_id ) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd ,'|' ) ) as phenotypes ,( SELECT STRING_AGG( distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|' ) ) as anatomyTerms ,re.author_summary summary ,COUNT(*) OVER() fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY ( ARRAY ( select reference_id from exposure e1 ,exp_anatomy a1 where a1.anatomy_id = ANY (ARRAY ( select descendant_object_id from dag_path where ancestor_object_id = ) ) and a1.exp_outcome_id = e1.exp_outcome_id UNION select reference_id from exposure e2 ,exp_event ee ,medium m ,term anatomyTerm where e2.exp_event_id = ee.id and ee.medium_id = m.id and m.term_acc_txt = anatomyTerm.acc_txt and m.term_object_type_id = anatomyTerm.object_type_id and anatomyTerm.id = ANY (ARRAY ( select descendant_object_id from dag_path where ancestor_object_id = ) ) ) ) group by e.reference_acc_txt ,r.abbr_authors_txt ,pub_start_yr ,re.author_summary order by stressorAgents LIMIT 50
Context: parallel worker
Statement: SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' ||Date: 2025-08-15 06:15:21
32 2 ERROR: AND (...) > 50
Times Reported Most Frequent Error / Event #32
Day Hour Count Aug 13 17 1 Aug 14 04 1 33 2 ERROR: invalid byte sequence for encoding
Times Reported Most Frequent Error / Event #33
Day Hour Count Aug 13 06 1 Aug 16 23 1 - ERROR: invalid byte sequence for encoding "UTF8": 0x00
- ERROR: invalid byte sequence for encoding "UTF8": 0x00
Context: unnamed portal parameter $1
Statement: SELECT /* GeneIdBySymbolAccDAO */ t.id ,t.nm ,t.nm_sort nmSort ,t.acc_txt acc ,t.acc_db_cd accDbCd FROM term t ,(SELECT li.term_id FROM term_label li INNER JOIN term_label_type lti ON li.term_label_type_id = lti.id AND li.object_type_id = lti.object_type_id AND UPPER(li.nm) = $1 AND lti.object_type_id = 4 AND lti.nm = 'SYMBOL' UNION SELECT l.object_id FROM db_link l WHERE l.acc_txt = $2 AND l.object_type_id = 4 AND l.type_cd = 'A') ids WHERE t.id = ids.term_id ORDER BY CASE WHEN UPPER(t.nm) = $3 THEN 1 ELSE 2 END ,t.nm_sortDate: 2025-08-13 06:22:30 Database: ctdprd51 Application: User: pubeu Remote:
Context: unnamed portal parameter $1
Statement: SELECT /* ObjectIdDAOImpl.LabelsAndAccs */ t.id ,t.nm ,t.nm_sort nmSort ,t.acc_txt acc ,t.acc_db_cd accDbCd FROM term t ,(SELECT li.term_id FROM term_label li WHERE UPPER(li.nm) = $1 AND li.object_type_id = 2 UNION SELECT l.object_id FROM db_link l WHERE upper( l.acc_txt ) = $2 AND l.object_type_id = 2 AND l.type_cd = 'A') ids WHERE t.id = ids.term_id ORDER BY CASE WHEN UPPER(t.nm) = $3 THEN 1 ELSE 2 END ,t.nm_sortDate: 2025-08-16 23:49:07 Database: ctdprd51 Application: User: pubeu Remote:
34 1 ERROR: FROM (...) as checksum_failures , blk_read_time as blk_read_time , blk_write_time as blk_write_time FROM pg_catalog.pg_stat_database ) T
Times Reported Most Frequent Error / Event #34
Day Hour Count Aug 14 12 1 35 1 ERROR: no operand in ts"..."
Times Reported Most Frequent Error / Event #35
Day Hour Count Aug 12 21 1 - ERROR: no operand in ts"松原タニシ & "
Statement: SELECT /* GeneBasicQueryDAO */ sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Symbol' THEN true ELSE false END isNameMatch ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,CASE WHEN UPPER(l.nm) = $1 THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE l.object_type_id = 4 AND t.object_type_id = 4 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 4 AND i.nm_fts @@ to_tsquery('common.english_nostops', $2) ) UNION ALL SELECT /* acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,false isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,1 relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 4 AND (upper( l.acc_txt ) = $3 OR upper( l.acc_txt ) = $4 OR upper( l.acc_txt ) = $5 ) ORDER BY 13,14 ) sq LIMIT 50
Date: 2025-08-12 21:49:30 Database: ctdprd51 Application: User: pubeu Remote:
36 1 ERROR: , blk_write_time as blk_write_time FROM pg_catalog.pg_stat_database ) T
Times Reported Most Frequent Error / Event #36
Day Hour Count Aug 14 16 1 37 1 ERROR: remaining connection slots are reserved for non-replication superuser connections ,stressorTerm.nm_html as chemNmHtml ,stressorTerm.nm_sort as chemNmSort ,stressorTerm.acc_txt as chemAcc ,(...) ) as stressorSrcTypeNm ,stressor.src_details as stressorSrcDetails ,stressor.sample_qty as stressorSampleQty ,stressor.note as stressorNote ,receptor.qty as nbrReceptors ,receptor.description as receptors ,receptor.note as receptorNotes ,receptorTerm.nm || '^' || (...) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms ,(...) ) as smokerStatus ,receptor.age as ageRange ,receptor.age_uom_nm as ageUOMNm ,receptor.age_qualifier_nm as ageQualifierNm ,receptor.gender_nm as genderNmSearch ,receptor.id receptorID ,(...) from exp_receptor_gender where exp_receptor_id = receptor.id ) as genderDetails ,(...) ) as receptorRace ,(...) ) as assayMethods ,event.medium_nm as medium ,event.medium_term_acc_txt as mediumAccTxt ,(...) ) as associatedStudyTitles ,event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr ,event.detection_limit as detectionLimit ,event.detection_limit_uom as detectionLimitUOM ,event.detection_freq as detectionFreq ,event.note as eventNote ,(...) ) as stateOrProvince ,(...) ) as localityTxt ,(...) ) as studyCountries ,exposureMarkerTerm.nm || '^' || (...) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers ,event.exp_marker_lvl as assayLevel ,assay_uom as measurement ,assay_measurement_stat as measurementStat ,assay_note as assayNote ,eiot.description as outcomeRltnp ,diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField ,phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField ,outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm ,e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,r.abbr_authors_txt as abbrAuthorsTxt ,(...) ) as studyFactorNms ,(...) ) as anatomyTerms ,outcome.note as outcomeNote ,eventLocation.exp_event_id as eventID ,COUNT(...) OVER() fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in (...) or receptorTerm.id in (...) GROUP BY chemNm ,chemNmHtml ,chemNmSort ,chemAcc ,stressorSrcDetails ,stressorSampleQty ,stressorNote ,receptorTerms ,medium ,mediumAccTxt ,assayedMarkers ,assayLevel ,measurement ,measurementStat ,assayNote ,outcomeRltnp ,diseaseField ,phenotypeField ,phenotypeActionDegreeTypeNm ,ref ,r.abbr_authors_txt ,collectionStartAndEndYr ,receptorID ,detectionLimit ,detectionLimitUOM ,detectionFreq ,eventNote ,outcomeNote ,eventID order by chemNmSort LIMIT 50
Times Reported Most Frequent Error / Event #37
Day Hour Count Aug 13 23 1 - ERROR: remaining connection slots are reserved for non-replication superuser connections ,stressorTerm.nm_html as chemNmHtml ,stressorTerm.nm_sort as chemNmSort ,stressorTerm.acc_txt as chemAcc ,( SELECT STRING_AGG( distinct stressorSrcType.nm || '^' || stressorSrcType.cd,'|' ) ) as stressorSrcTypeNm ,stressor.src_details as stressorSrcDetails ,stressor.sample_qty as stressorSampleQty ,stressor.note as stressorNote ,receptor.qty as nbrReceptors ,receptor.description as receptors ,receptor.note as receptorNotes ,receptorTerm.nm || '^' || (select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms ,( SELECT STRING_AGG( distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct,' | ' ) ) as smokerStatus ,receptor.age as ageRange ,receptor.age_uom_nm as ageUOMNm ,receptor.age_qualifier_nm as ageQualifierNm ,receptor.gender_nm as genderNmSearch ,receptor.id receptorID ,( SELECT STRING_AGG ( pct || '^' || gender_nm || '^' || gender_nm_html, '|' ) from exp_receptor_gender where exp_receptor_id = receptor.id ) as genderDetails ,( SELECT STRING_AGG( DISTINCT receptorRace.race_nm || '^' || receptorRace.pct,' | ' ) ) as receptorRace ,( SELECT STRING_AGG( DISTINCT eventAssayMethod.nm ,' | ' ) ) as assayMethods ,event.medium_nm as medium ,event.medium_term_acc_txt as mediumAccTxt ,( SELECT STRING_AGG( DISTINCT eventProject.project_nm ,' | ' ) ) as associatedStudyTitles ,event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr ,event.detection_limit as detectionLimit ,event.detection_limit_uom as detectionLimitUOM ,event.detection_freq as detectionFreq ,event.note as eventNote ,( SELECT STRING_AGG( DISTINCT eventLocation.geographic_region_nm,' | ' ) ) as stateOrProvince ,( SELECT STRING_AGG( DISTINCT eventLocation.locality_txt,' | ' ) ) as localityTxt ,( SELECT STRING_AGG( distinct country.nm,' | ' ) ) as studyCountries ,exposureMarkerTerm.nm || '^' || (select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers ,event.exp_marker_lvl as assayLevel ,assay_uom as measurement ,assay_measurement_stat as measurementStat ,assay_note as assayNote ,eiot.description as outcomeRltnp ,diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField ,phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField ,outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm ,e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,r.abbr_authors_txt as abbrAuthorsTxt ,( SELECT STRING_AGG( DISTINCT expStudyFactor.study_factor_nm,' | ' ) ) as studyFactorNms ,( SELECT STRING_AGG( distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|' ) ) as anatomyTerms ,outcome.note as outcomeNote ,eventLocation.exp_event_id as eventID ,COUNT(*) OVER() fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = ) or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ) GROUP BY chemNm ,chemNmHtml ,chemNmSort ,chemAcc ,stressorSrcDetails ,stressorSampleQty ,stressorNote ,receptorTerms ,medium ,mediumAccTxt ,assayedMarkers ,assayLevel ,measurement ,measurementStat ,assayNote ,outcomeRltnp ,diseaseField ,phenotypeField ,phenotypeActionDegreeTypeNm ,ref ,r.abbr_authors_txt ,collectionStartAndEndYr ,receptorID ,detectionLimit ,detectionLimitUOM ,detectionFreq ,eventNote ,outcomeNote ,eventID order by chemNmSort LIMIT 50
Context: parallel worker
Statement: SELECT DISTINCT stressorTerm.nm as chemNmDate: 2025-08-13 23:31:31
38 1 ERROR: remaining connection slots are reserved for non-replication superuser connections FROM chem_disease cd WHERE cd.chem_id IN (...) AND cd.disease_id IN (...)
Times Reported Most Frequent Error / Event #38
Day Hour Count Aug 15 06 1 - ERROR: remaining connection slots are reserved for non-replication superuser connections FROM chem_disease cd WHERE cd.chem_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = ) AND cd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = )
Context: parallel worker
Statement: SELECT /* ChemDiseaseAssnsDAO.rowCount */ COUNT(*)Date: 2025-08-15 06:25:07
39 1 ERROR: remaining connection slots are reserved for non-replication superuser connections c.nm chemnm ,c.nm_html chemnmhtml ,c.acc_txt chemacc ,c.secondary_nm casRN ,c.id chemid ,d.nm diseasenm ,d.acc_txt diseaseacc ,d.acc_db_cd diseaseaccdbcd ,d.id diseaseid ,cd.network_score networkscore ,cd.indirect_gene_qty inferredcount ,cd.reference_qty referencecount ,cd.exposure_reference_qty exposureReferenceCount ,CASE WHEN cd.curated_reference_qty > 0 THEN (...) FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.disease_id IN (...) ORDER BY actionTypes ,cd.network_score DESC NULLS LAST ,d.nm_sort ,c.nm_sort LIMIT 50
Times Reported Most Frequent Error / Event #39
Day Hour Count Aug 15 06 1 - ERROR: remaining connection slots are reserved for non-replication superuser connections c.nm chemnm ,c.nm_html chemnmhtml ,c.acc_txt chemacc ,c.secondary_nm casRN ,c.id chemid ,d.nm diseasenm ,d.acc_txt diseaseacc ,d.acc_db_cd diseaseaccdbcd ,d.id diseaseid ,cd.network_score networkscore ,cd.indirect_gene_qty inferredcount ,cd.reference_qty referencecount ,cd.exposure_reference_qty exposureReferenceCount ,CASE WHEN cd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = ) ORDER BY actionTypes ,cd.network_score DESC NULLS LAST ,d.nm_sort ,c.nm_sort LIMIT 50
Context: parallel worker
Statement: SELECT /* ChemDiseaseAssnsDAO */Date: 2025-08-15 06:05:33
40 1 ERROR: remaining connection slots are reserved for non-replication superuser connections d.nm diseasenm ,d.acc_txt diseaseacc ,d.acc_db_cd diseaseaccdbcd ,d.id diseaseid ,(...) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) slimMappings ,tse.corrected_p_val pValCorrected ,tse.raw_p_val pValRaw ,tse.target_match_qty targetmatchqty ,tse.target_total_qty targettotalqty ,tse.background_match_qty backgroundmatchqty ,tse.background_total_qty backgroundtotalqty ,COUNT(...) OVER() fullRowCount FROM term_set_enrichment tse INNER JOIN term d ON tse.enriched_term_id = d.id WHERE tse.term_ids_digest = AND tse.enriched_object_type_id = 3 AND tse.corrected_p_val < ORDER BY slimMappings ,tse.corrected_p_val LIMIT 1000000
Times Reported Most Frequent Error / Event #40
Day Hour Count Aug 15 06 1 - ERROR: remaining connection slots are reserved for non-replication superuser connections d.nm diseasenm ,d.acc_txt diseaseacc ,d.acc_db_cd diseaseaccdbcd ,d.id diseaseid ,(SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) slimMappings ,tse.corrected_p_val pValCorrected ,tse.raw_p_val pValRaw ,tse.target_match_qty targetmatchqty ,tse.target_total_qty targettotalqty ,tse.background_match_qty backgroundmatchqty ,tse.background_total_qty backgroundtotalqty ,COUNT(*) OVER() fullRowCount FROM term_set_enrichment tse INNER JOIN term d ON tse.enriched_term_id = d.id WHERE tse.term_ids_digest = AND tse.enriched_object_type_id = 3 AND tse.corrected_p_val < ORDER BY slimMappings ,tse.corrected_p_val LIMIT 1000000
Context: parallel worker
Statement: SELECT /* AnalyzerEnrichedDiseasesDAO */Date: 2025-08-15 06:07:32
41 1 ERROR: remaining connection slots are reserved for non-replication superuser connections ,chemTerm.nm_html chemNmHtml ,chemTerm.acc_txt chemAcc ,chemTerm.acc_db_cd chemAccDBCd ,'chem' chemObjectTypeCd FROM term chemTerm ,phenotype_term_reference ptr where ptr.term_id = and ptr.phenotype_id = and ptr.via_term_id = chemTerm.id and source_cd = 'I' ORDER BY chemTerm.nm
Times Reported Most Frequent Error / Event #41
Day Hour Count Aug 15 06 1 - ERROR: remaining connection slots are reserved for non-replication superuser connections ,chemTerm.nm_html chemNmHtml ,chemTerm.acc_txt chemAcc ,chemTerm.acc_db_cd chemAccDBCd ,'chem' chemObjectTypeCd FROM term chemTerm ,phenotype_term_reference ptr where ptr.term_id = and ptr.phenotype_id = and ptr.via_term_id = chemTerm.id and source_cd = 'I' ORDER BY chemTerm.nm
Context: parallel worker
Statement: select distinct /* PhenotypeGeneChemsDAO */ chemTerm.nm chemNmDate: 2025-08-15 06:07:19
42 1 ERROR: remaining connection slots are reserved for non-replication superuser connections ,stressorTerm.nm_html as chemNmHtml ,stressorTerm.nm_sort as chemNmSort ,stressorTerm.acc_txt as chemAcc ,(...) ) as stressorSrcTypeNm ,stressor.src_details as stressorSrcDetails ,stressor.sample_qty as stressorSampleQty ,stressor.note as stressorNote ,receptor.qty as nbrReceptors ,receptor.description as receptors ,receptor.note as receptorNotes ,receptorTerm.nm || '^' || (...) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms ,(...) ) as smokerStatus ,receptor.age as ageRange ,receptor.age_uom_nm as ageUOMNm ,receptor.age_qualifier_nm as ageQualifierNm ,receptor.gender_nm as genderNmSearch ,receptor.id receptorID ,(...) from exp_receptor_gender where exp_receptor_id = receptor.id ) as genderDetails ,(...) ) as receptorRace ,(...) ) as assayMethods ,event.medium_nm as medium ,event.medium_term_acc_txt as mediumAccTxt ,(...) ) as associatedStudyTitles ,event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr ,event.detection_limit as detectionLimit ,event.detection_limit_uom as detectionLimitUOM ,event.detection_freq as detectionFreq ,event.note as eventNote ,(...) ) as stateOrProvince ,(...) ) as localityTxt ,(...) ) as studyCountries ,exposureMarkerTerm.nm || '^' || (...) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers ,event.exp_marker_lvl as assayLevel ,assay_uom as measurement ,assay_measurement_stat as measurementStat ,assay_note as assayNote ,eiot.description as outcomeRltnp ,diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField ,phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField ,outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm ,e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,r.abbr_authors_txt as abbrAuthorsTxt ,(...) ) as studyFactorNms ,(...) ) as anatomyTerms ,outcome.note as outcomeNote ,eventLocation.exp_event_id as eventID ,COUNT(...) OVER() fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = or receptorTerm.id = GROUP BY chemNm ,chemNmHtml ,chemNmSort ,chemAcc ,stressorSrcDetails ,stressorSampleQty ,stressorNote ,receptorTerms ,medium ,mediumAccTxt ,assayedMarkers ,assayLevel ,measurement ,measurementStat ,assayNote ,outcomeRltnp ,diseaseField ,phenotypeField ,phenotypeActionDegreeTypeNm ,ref ,r.abbr_authors_txt ,collectionStartAndEndYr ,receptorID ,detectionLimit ,detectionLimitUOM
Times Reported Most Frequent Error / Event #42
Day Hour Count Aug 15 06 1 - ERROR: remaining connection slots are reserved for non-replication superuser connections ,stressorTerm.nm_html as chemNmHtml ,stressorTerm.nm_sort as chemNmSort ,stressorTerm.acc_txt as chemAcc ,( SELECT STRING_AGG( distinct stressorSrcType.nm || '^' || stressorSrcType.cd,'|' ) ) as stressorSrcTypeNm ,stressor.src_details as stressorSrcDetails ,stressor.sample_qty as stressorSampleQty ,stressor.note as stressorNote ,receptor.qty as nbrReceptors ,receptor.description as receptors ,receptor.note as receptorNotes ,receptorTerm.nm || '^' || (select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms ,( SELECT STRING_AGG( distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct,' | ' ) ) as smokerStatus ,receptor.age as ageRange ,receptor.age_uom_nm as ageUOMNm ,receptor.age_qualifier_nm as ageQualifierNm ,receptor.gender_nm as genderNmSearch ,receptor.id receptorID ,( SELECT STRING_AGG ( pct || '^' || gender_nm || '^' || gender_nm_html, '|' ) from exp_receptor_gender where exp_receptor_id = receptor.id ) as genderDetails ,( SELECT STRING_AGG( DISTINCT receptorRace.race_nm || '^' || receptorRace.pct,' | ' ) ) as receptorRace ,( SELECT STRING_AGG( DISTINCT eventAssayMethod.nm ,' | ' ) ) as assayMethods ,event.medium_nm as medium ,event.medium_term_acc_txt as mediumAccTxt ,( SELECT STRING_AGG( DISTINCT eventProject.project_nm ,' | ' ) ) as associatedStudyTitles ,event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr ,event.detection_limit as detectionLimit ,event.detection_limit_uom as detectionLimitUOM ,event.detection_freq as detectionFreq ,event.note as eventNote ,( SELECT STRING_AGG( DISTINCT eventLocation.geographic_region_nm,' | ' ) ) as stateOrProvince ,( SELECT STRING_AGG( DISTINCT eventLocation.locality_txt,' | ' ) ) as localityTxt ,( SELECT STRING_AGG( distinct country.nm,' | ' ) ) as studyCountries ,exposureMarkerTerm.nm || '^' || (select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers ,event.exp_marker_lvl as assayLevel ,assay_uom as measurement ,assay_measurement_stat as measurementStat ,assay_note as assayNote ,eiot.description as outcomeRltnp ,diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField ,phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField ,outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm ,e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,r.abbr_authors_txt as abbrAuthorsTxt ,( SELECT STRING_AGG( DISTINCT expStudyFactor.study_factor_nm,' | ' ) ) as studyFactorNms ,( SELECT STRING_AGG( distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|' ) ) as anatomyTerms ,outcome.note as outcomeNote ,eventLocation.exp_event_id as eventID ,COUNT(*) OVER() fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = or receptorTerm.id = GROUP BY chemNm ,chemNmHtml ,chemNmSort ,chemAcc ,stressorSrcDetails ,stressorSampleQty ,stressorNote ,receptorTerms ,medium ,mediumAccTxt ,assayedMarkers ,assayLevel ,measurement ,measurementStat ,assayNote ,outcomeRltnp ,diseaseField ,phenotypeField ,phenotypeActionDegreeTypeNm ,ref ,r.abbr_authors_txt ,collectionStartAndEndYr ,receptorID ,detectionLimit ,detectionLimitUOM
Context: parallel worker
Statement: SELECT DISTINCT stressorTerm.nm as chemNmDate: 2025-08-15 06:40:28
43 1 ERROR: remaining connection slots are reserved for non-replication superuser connections g.nm symbol ,g.nm_html symbolHtml ,g.secondary_nm nm ,g.acc_txt acc ,g.acc_db_cd accDbCd ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,g.id FROM term g WHERE g.id IN(...) UNION ALL SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE gcr.reference_id = UNION ALL SELECT ggr.from_gene_id FROM gene_gene_reference ggr WHERE ggr.reference_id = UNION ALL SELECT ggr.to_gene_id FROM gene_gene_reference ggr WHERE ggr.reference_id = UNION ALL select event.exp_marker_term_id from exposure e ,exp_event event where e.reference_id = and e.exp_event_id = event.id and event.exp_marker_type_id in (...) UNION ALL SELECT term_id FROM phenotype_term_reference ptr WHERE ptr.reference_id = and ptr.term_object_type_id = 4 ) ORDER BY g.nm_sort
Times Reported Most Frequent Error / Event #43
Day Hour Count Aug 14 16 1 - ERROR: remaining connection slots are reserved for non-replication superuser connections g.nm symbol ,g.nm_html symbolHtml ,g.secondary_nm nm ,g.acc_txt acc ,g.acc_db_cd accDbCd ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,g.id FROM term g WHERE g.id IN( SELECT gdr.gene_id FROM gene_disease_reference gdr WHERE gdr.reference_id = AND gdr.source_cd IN ('C','O') UNION ALL SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE gcr.reference_id = UNION ALL SELECT ggr.from_gene_id FROM gene_gene_reference ggr WHERE ggr.reference_id = UNION ALL SELECT ggr.to_gene_id FROM gene_gene_reference ggr WHERE ggr.reference_id = UNION ALL select event.exp_marker_term_id from exposure e ,exp_event event where e.reference_id = and e.exp_event_id = event.id and event.exp_marker_type_id in ( select id from exp_marker_type where nm like 'gene%' ) UNION ALL SELECT term_id FROM phenotype_term_reference ptr WHERE ptr.reference_id = and ptr.term_object_type_id = 4 ) ORDER BY g.nm_sort
Context: parallel worker
Statement: SELECT /* ReferenceCitedGenesDAO */Date: 2025-08-14 16:07:58
44 1 ERROR: , COALESCE(...) as checksum_failures , blk_read_time as blk_read_time , blk_write_time as blk_write_time FROM pg_catalog.pg_stat_database ) T
Times Reported Most Frequent Error / Event #44
Day Hour Count Aug 14 05 1 45 1 LOG: database system was shut down at ...
Times Reported Most Frequent Error / Event #45
Day Hour Count Aug 15 08 1 46 1 ERROR: remaining connection slots are reserved for non-replication superuser connections ,COUNT(...) OVER() fullRowCount FROM (...) AND gga.is_not = false ) sq ORDER BY sq.gonmsort ,sq.genesymbolsort LIMIT 50
Times Reported Most Frequent Error / Event #46
Day Hour Count Aug 15 06 1 - ERROR: remaining connection slots are reserved for non-replication superuser connections ,COUNT(*) OVER() fullRowCount FROM ( SELECT DISTINCT gt.nm gonm ,gt.nm_html gonmhtml ,gt.nm_sort gonmsort ,gt.acc_txt goacc ,gt.object_id goid ,g.nm genesymbol ,g.nm_sort genesymbolsort ,g.acc_txt geneacc ,g.acc_db_cd geneaccdbcd ,g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN (SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = ) AND gga.is_not = false ) sq ORDER BY sq.gonmsort ,sq.genesymbolsort LIMIT 50
Context: parallel worker
Statement: SELECT /* GoGenesDAO */ sq.*Date: 2025-08-15 06:25:06
47 1 ERROR: , tup_deleted as tup_deleted , conflicts as conflicts , temp_files as temp_files , temp_bytes as temp_bytes , deadlocks as deadlocks , COALESCE(...) as checksum_failures , blk_read_time as blk_read_time , blk_write_time as blk_write_time FROM pg_catalog.pg_stat_database ) T
Times Reported Most Frequent Error / Event #47
Day Hour Count Aug 14 16 1