pgBadger-
Global information
- Generated on Sun Aug 31 04:15:05 2025
- Log file: /project/archive/log/postgres/dbprd51/postgresql.log-20250830
- Parsed 149,325 log entries in 3s
- Log start from 2025-08-24 00:00:02 to 2025-08-30 23:59:39
-
Overview
Global Stats
- 202 Number of unique normalized queries
- 766 Number of queries
- 15h59m28s Total query duration
- 2025-08-24 00:02:53 First query
- 2025-08-30 23:02:33 Last query
- 2 queries/s at 2025-08-28 02:15:33 Query peak
- 15h59m28s Total query duration
- 0ms Prepare/parse total duration
- 0ms Bind total duration
- 15h59m28s Execute total duration
- 1,394 Number of events
- 18 Number of unique normalized events
- 1,041 Max number of times the same event was reported
- 0 Number of cancellation
- 563 Total number of automatic vacuums
- 258 Total number of automatic analyzes
- 3,185 Number temporary file
- 43.55 GiB Max size of temporary file
- 200.23 MiB Average size of temporary file
- 14,175 Total number of sessions
- 151 sessions at 2025-08-27 00:35:44 Session peak
- 285d5h33m47s Total duration of sessions
- 28m58s Average duration of sessions
- 0 Average queries per session
- 4s61ms Average queries duration per session
- 28m54s Average idle time per session
- 14,175 Total number of connections
- 18 connections/s at 2025-08-28 13:45:02 Connection peak
- 2 Total number of databases
SQL Traffic
Key values
- 2 queries/s Query Peak
- 2025-08-28 02:15:33 Date
SELECT Traffic
Key values
- 2 queries/s Query Peak
- 2025-08-28 02:15:33 Date
INSERT/UPDATE/DELETE Traffic
Key values
- 1 queries/s Query Peak
- 2025-08-26 23:29:26 Date
Queries duration
Key values
- 15h59m28s Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Aug 24 00 4 0ms 8m59s 2m20s 0ms 6s954ms 9m6s 01 7 0ms 2m24s 27s37ms 7s565ms 7s784ms 2m24s 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 16 0ms 7s416ms 6s584ms 14s95ms 29s138ms 37s227ms 06 2 0ms 7s110ms 7s78ms 0ms 0ms 14s157ms 07 2 0ms 7s154ms 7s68ms 0ms 0ms 7s154ms 08 2 0ms 7s113ms 7s55ms 0ms 0ms 14s111ms 09 3 0ms 7s92ms 6s407ms 0ms 0ms 19s222ms 10 5 0ms 11m42s 4m43s 7s36ms 11m33s 11m42s 11 2 0ms 6s971ms 6s966ms 0ms 0ms 13s932ms 12 2 0ms 7s77ms 7s31ms 0ms 0ms 14s63ms 13 2 0ms 7s57ms 6s54ms 0ms 0ms 12s108ms 14 5 0ms 7s152ms 6s684ms 0ms 14s150ms 14s230ms 15 2 0ms 7s104ms 7s66ms 0ms 7s28ms 7s104ms 16 2 0ms 7s215ms 7s137ms 0ms 7s59ms 7s215ms 17 2 0ms 7s94ms 7s40ms 0ms 6s987ms 7s94ms 18 3 0ms 7s232ms 6s451ms 0ms 7s232ms 12s121ms 19 2 0ms 7s83ms 7s50ms 0ms 7s16ms 7s83ms 20 5 0ms 7s133ms 6s441ms 0ms 7s20ms 18s52ms 21 2 0ms 7s226ms 7s104ms 0ms 6s983ms 7s226ms 22 3 0ms 7s88ms 6s400ms 0ms 0ms 12s174ms 23 3 0ms 7s187ms 6s568ms 0ms 5s492ms 7s187ms Aug 25 00 4 0ms 8m59s 2m20s 0ms 7s44ms 9m6s 01 2 0ms 7s162ms 7s151ms 0ms 0ms 14s302ms 02 5 0ms 19s538ms 9s201ms 0ms 6s79ms 19s538ms 03 3 0ms 7s572ms 7s169ms 0ms 7s572ms 13s934ms 04 2 0ms 7s370ms 7s183ms 0ms 0ms 14s367ms 05 8 0ms 17s966ms 8s191ms 7s184ms 14s93ms 17s966ms 06 2 0ms 7s73ms 7s35ms 0ms 0ms 7s73ms 07 8 0ms 9s182ms 8s190ms 0ms 14s305ms 45s481ms 08 2 0ms 7s150ms 7s137ms 0ms 0ms 14s275ms 09 4 0ms 7s106ms 6s231ms 0ms 7s70ms 10s748ms 10 3 0ms 7s63ms 6s494ms 0ms 5s459ms 7s63ms 11 3 0ms 6s994ms 6s330ms 0ms 0ms 11s996ms 12 3 0ms 7s224ms 6s741ms 0ms 6s8ms 7s224ms 13 3 0ms 7s131ms 6s403ms 0ms 0ms 12s78ms 14 3 0ms 6s942ms 6s331ms 0ms 0ms 13s776ms 15 2 0ms 7s33ms 7s20ms 0ms 0ms 7s33ms 16 18 0ms 20s716ms 11s771ms 20s543ms 32s837ms 32s925ms 17 22 0ms 20s807ms 11s695ms 20s554ms 20s694ms 33s11ms 18 2 0ms 7s197ms 7s145ms 0ms 7s93ms 7s197ms 19 2 0ms 7s24ms 7s22ms 0ms 7s20ms 7s24ms 20 2 0ms 7s902ms 7s637ms 0ms 0ms 15s274ms 21 2 0ms 7s57ms 6s981ms 0ms 6s906ms 7s57ms 22 2 0ms 7s208ms 7s179ms 0ms 0ms 14s358ms 23 4 0ms 6s955ms 6s103ms 0ms 10s570ms 13s844ms Aug 26 00 4 0ms 9m 2m20s 0ms 7s169ms 9m6s 01 2 0ms 7s242ms 7s124ms 0ms 0ms 7s242ms 02 3 0ms 7s139ms 6s394ms 0ms 0ms 19s184ms 03 4 0ms 9s142ms 7s570ms 6s935ms 7s149ms 9s142ms 04 2 0ms 7s4ms 6s986ms 0ms 0ms 13s972ms 05 9 0ms 7s503ms 7s145ms 13s996ms 14s147ms 14s951ms 06 2 0ms 7s227ms 7s94ms 0ms 0ms 14s188ms 07 4 0ms 7s102ms 6s114ms 0ms 5s185ms 12s190ms 08 4 0ms 9s107ms 8s66ms 0ms 7s126ms 18s89ms 09 5 0ms 7s63ms 5s998ms 0ms 6s938ms 10s215ms 10 2 0ms 6s962ms 6s946ms 0ms 0ms 13s893ms 11 2 0ms 7s151ms 7s3ms 0ms 6s856ms 7s151ms 12 3 0ms 7s76ms 6s416ms 0ms 0ms 12s196ms 13 5 0ms 7s138ms 6s65ms 5s326ms 7s138ms 10s756ms 14 18 0ms 4m22s 24s93ms 23s452ms 35s826ms 4m37s 15 31 0ms 2m37s 46s261ms 1m34s 1m44s 2m37s 16 15 0ms 14m33s 1m33s 34s909ms 1m58s 14m43s 17 13 0ms 33m51s 5m23s 1m27s 4m27s 33m59s 18 8 0ms 10m7s 1m42s 39s522ms 42s142ms 10m15s 19 4 0ms 42m47s 10m46s 0ms 12s567ms 42m47s 20 39 0ms 50m27s 2m11s 2m 3m21s 50m27s 21 7 0ms 5m16s 1m3s 6s716ms 31s706ms 5m16s 22 19 0ms 3m27s 26s957ms 41s36ms 51s79ms 3m27s 23 29 0ms 14m17s 56s464ms 1m27s 2m8s 14m23s Aug 27 00 12 0ms 25m41s 3m26s 16s213ms 3m6s 25m41s 01 5 0ms 1h49m51s 22m36s 0ms 7s627ms 1h49m51s 02 3 0ms 7s265ms 6s528ms 0ms 5s79ms 14s506ms 03 19 0ms 1h1m53s 6m10s 16s462ms 2m51s 1h2m4s 04 5 0ms 55s69ms 16s654ms 0ms 8s832ms 55s69ms 05 8 0ms 7s353ms 6s629ms 5s66ms 14s225ms 14s255ms 06 10 0ms 2h9m11s 17m15s 5s888ms 8m55s 2h9m24s 07 3 0ms 6s873ms 6s222ms 0ms 0ms 11s889ms 08 2 0ms 7s89ms 6s914ms 0ms 0ms 7s89ms 09 2 0ms 7s266ms 7s162ms 0ms 0ms 7s266ms 10 10 0ms 10s300ms 7s789ms 7s135ms 19s535ms 38s473ms 11 6 0ms 23s14ms 8s871ms 5s605ms 6s858ms 23s14ms 12 7 0ms 7s34ms 5s887ms 5s83ms 7s34ms 12s215ms 13 4 0ms 7s4ms 6s133ms 0ms 5s466ms 7s4ms 14 15 0ms 1m20s 23s131ms 36s209ms 41s846ms 1m20s 15 12 0ms 35m19s 3m1s 7s291ms 12s564ms 35m19s 16 10 0ms 2m26s 35s363ms 12s182ms 19s488ms 2m34s 17 3 0ms 7s283ms 6s486ms 0ms 7s283ms 12s174ms 18 3 0ms 7s234ms 6s391ms 0ms 6s937ms 12s238ms 19 2 0ms 7s85ms 7s35ms 0ms 6s986ms 7s85ms 20 2 0ms 7s197ms 7s32ms 0ms 0ms 7s197ms 21 3 0ms 7s509ms 6s599ms 0ms 5s244ms 7s509ms 22 3 0ms 7s156ms 6s381ms 0ms 0ms 12s167ms 23 2 0ms 7s54ms 7s33ms 0ms 7s12ms 7s54ms Aug 28 00 6 0ms 9m12s 1m37s 5s56ms 12s424ms 9m19s 01 3 0ms 7s12ms 6s334ms 0ms 6s978ms 12s24ms 02 6 0ms 12s726ms 8s337ms 0ms 6s911ms 30s892ms 03 4 0ms 7s10ms 6s161ms 0ms 5s12ms 12s629ms 04 4 0ms 7s118ms 6s43ms 0ms 5s39ms 7s118ms 05 7 0ms 7s229ms 6s203ms 5s88ms 6s993ms 13s756ms 06 3 0ms 8s39ms 7s476ms 0ms 7s119ms 8s39ms 07 2 0ms 6s980ms 6s974ms 0ms 0ms 6s980ms 08 20 0ms 32s562ms 10s625ms 17s108ms 58s1ms 58s481ms 09 2 0ms 7s48ms 7s1ms 0ms 6s954ms 7s48ms 10 6 0ms 11s27ms 7s594ms 0ms 6s850ms 21s591ms 11 3 0ms 16s105ms 10s66ms 0ms 7s174ms 16s105ms 12 2 0ms 7s38ms 6s968ms 0ms 6s898ms 7s38ms 13 3 0ms 6s978ms 6s746ms 0ms 6s974ms 6s978ms 14 2 0ms 6s989ms 6s964ms 0ms 6s939ms 6s989ms 15 4 0ms 14s433ms 8s682ms 7s31ms 7s40ms 14s433ms 16 1 0ms 5s349ms 5s349ms 0ms 0ms 5s349ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 1 0ms 5s7ms 5s7ms 0ms 0ms 5s7ms 19 1 0ms 5s88ms 5s88ms 0ms 0ms 5s88ms 20 1 0ms 5s102ms 5s102ms 0ms 0ms 5s102ms 21 1 0ms 5s271ms 5s271ms 0ms 0ms 5s271ms 22 1 0ms 6s298ms 6s298ms 0ms 0ms 6s298ms 23 1 0ms 5s78ms 5s78ms 0ms 0ms 5s78ms Aug 29 00 4 0ms 9m28s 2m27s 0ms 6s667ms 9m36s 01 2 0ms 5s755ms 5s418ms 0ms 5s81ms 5s755ms 02 1 0ms 5s12ms 5s12ms 0ms 0ms 5s12ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 1 0ms 5s577ms 5s577ms 0ms 0ms 5s577ms 05 4 0ms 5s725ms 5s285ms 5s30ms 5s338ms 5s725ms 06 2 0ms 5s426ms 5s216ms 0ms 5s6ms 5s426ms 07 5 0ms 12s678ms 7s992ms 0ms 5s359ms 16s783ms 08 5 0ms 12s886ms 12s39ms 0ms 11s805ms 12s886ms 09 4 0ms 15s837ms 12s111ms 8s982ms 11s883ms 15s837ms 10 2 0ms 15s88ms 10s163ms 0ms 5s238ms 15s88ms 11 1 0ms 5s63ms 5s63ms 0ms 0ms 5s63ms 12 2 0ms 5s980ms 5s529ms 0ms 5s79ms 5s980ms 13 29 0ms 8m6s 34s831ms 28s554ms 34s371ms 8m6s 14 15 0ms 22s474ms 10s755ms 18s578ms 20s627ms 32s930ms 15 2 0ms 5s966ms 5s524ms 0ms 5s81ms 5s966ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 1 0ms 5s382ms 5s382ms 0ms 0ms 5s382ms 18 1 0ms 5s262ms 5s262ms 0ms 0ms 5s262ms 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 1 0ms 5s134ms 5s134ms 0ms 0ms 5s134ms 21 2 0ms 5s956ms 5s503ms 0ms 5s50ms 5s956ms 22 1 0ms 5s130ms 5s130ms 0ms 0ms 5s130ms 23 1 0ms 5s11ms 5s11ms 0ms 0ms 5s11ms Aug 30 00 3 0ms 9m6s 3m6s 0ms 5s188ms 9m13s 01 1 0ms 5s46ms 5s46ms 0ms 0ms 5s46ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 2 0ms 12s426ms 8s720ms 0ms 5s14ms 12s426ms 04 1 0ms 5s150ms 5s150ms 0ms 0ms 5s150ms 05 2 0ms 5s150ms 5s116ms 0ms 0ms 5s150ms 06 1 0ms 5s66ms 5s66ms 0ms 0ms 5s66ms 07 2 0ms 6s47ms 5s546ms 0ms 5s45ms 6s47ms 08 2 0ms 5s486ms 5s462ms 0ms 0ms 10s924ms 09 1 0ms 5s43ms 5s43ms 0ms 0ms 5s43ms 10 0 0ms 0ms 0ms 0ms 0ms 0ms 11 2 0ms 5s498ms 5s355ms 0ms 5s213ms 5s498ms 12 1 0ms 5s94ms 5s94ms 0ms 0ms 5s94ms 13 0 0ms 0ms 0ms 0ms 0ms 0ms 14 0 0ms 0ms 0ms 0ms 0ms 0ms 15 1 0ms 5s33ms 5s33ms 0ms 0ms 5s33ms 16 1 0ms 5s55ms 5s55ms 0ms 0ms 5s55ms 17 1 0ms 5s81ms 5s81ms 0ms 0ms 5s81ms 18 0 0ms 0ms 0ms 0ms 0ms 0ms 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 1 0ms 5s135ms 5s135ms 0ms 0ms 5s135ms 22 1 0ms 5s98ms 5s98ms 0ms 0ms 5s98ms 23 1 0ms 5s29ms 5s29ms 0ms 0ms 5s29ms Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Aug 24 00 3 0 3m4s 0ms 0ms 8m59s 01 7 0 27s37ms 0ms 7s565ms 2m24s 02 0 0 0ms 0ms 0ms 0ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 16 0 6s584ms 0ms 14s95ms 37s227ms 06 2 0 7s78ms 0ms 0ms 14s157ms 07 2 0 7s68ms 0ms 0ms 7s154ms 08 2 0 7s55ms 0ms 0ms 0ms 09 3 0 6s407ms 0ms 0ms 19s222ms 10 5 0 4m43s 0ms 7s36ms 11m42s 11 2 0 6s966ms 0ms 0ms 13s932ms 12 2 0 7s31ms 0ms 0ms 14s63ms 13 2 0 6s54ms 0ms 0ms 12s108ms 14 5 0 6s684ms 0ms 0ms 14s230ms 15 2 0 7s66ms 0ms 0ms 7s104ms 16 2 0 7s137ms 0ms 0ms 7s215ms 17 2 0 7s40ms 0ms 0ms 7s94ms 18 3 0 6s451ms 0ms 0ms 12s121ms 19 2 0 7s50ms 0ms 0ms 7s83ms 20 5 0 6s441ms 0ms 0ms 18s52ms 21 2 0 7s104ms 0ms 0ms 7s226ms 22 3 0 6s400ms 0ms 0ms 12s174ms 23 3 0 6s568ms 0ms 0ms 7s187ms Aug 25 00 3 0 3m4s 0ms 0ms 8m59s 01 2 0 7s151ms 0ms 0ms 14s302ms 02 5 0 9s201ms 0ms 0ms 19s538ms 03 3 0 7s169ms 0ms 0ms 13s934ms 04 2 0 7s183ms 0ms 0ms 14s367ms 05 8 0 8s191ms 0ms 7s184ms 17s966ms 06 2 0 7s35ms 0ms 0ms 7s73ms 07 8 0 8s190ms 0ms 0ms 45s481ms 08 2 0 7s137ms 0ms 0ms 14s275ms 09 4 0 6s231ms 0ms 0ms 10s748ms 10 3 0 6s494ms 0ms 0ms 7s63ms 11 3 0 6s330ms 0ms 0ms 11s996ms 12 3 0 6s741ms 0ms 0ms 7s224ms 13 3 0 6s403ms 0ms 0ms 12s78ms 14 3 0 6s331ms 0ms 0ms 13s776ms 15 2 0 7s20ms 0ms 0ms 7s33ms 16 18 0 11s771ms 7s171ms 20s543ms 32s925ms 17 22 0 11s695ms 12s284ms 20s554ms 33s11ms 18 2 0 7s145ms 0ms 0ms 7s197ms 19 2 0 7s22ms 0ms 0ms 7s24ms 20 2 0 7s637ms 0ms 0ms 15s274ms 21 2 0 6s981ms 0ms 0ms 7s57ms 22 2 0 7s179ms 0ms 0ms 14s358ms 23 4 0 6s103ms 0ms 0ms 13s844ms Aug 26 00 3 0 3m4s 0ms 0ms 9m 01 2 0 7s124ms 0ms 0ms 7s242ms 02 3 0 6s394ms 0ms 0ms 19s184ms 03 4 0 7s570ms 0ms 6s935ms 9s142ms 04 2 0 6s986ms 0ms 0ms 13s972ms 05 9 0 7s145ms 0ms 13s996ms 14s951ms 06 2 0 7s94ms 0ms 0ms 0ms 07 4 0 6s114ms 0ms 0ms 12s190ms 08 4 0 8s66ms 0ms 0ms 18s89ms 09 5 0 5s998ms 0ms 0ms 10s215ms 10 2 0 6s946ms 0ms 0ms 13s893ms 11 2 0 7s3ms 0ms 0ms 7s151ms 12 3 0 6s416ms 0ms 0ms 12s196ms 13 5 0 6s65ms 0ms 5s326ms 10s756ms 14 17 0 24s978ms 7s169ms 23s452ms 4m37s 15 31 0 46s261ms 1m27s 1m34s 2m37s 16 7 0 6s194ms 0ms 5s321ms 13s305ms 17 7 0 5m2s 0ms 6s956ms 33m59s 18 8 0 1m42s 0ms 39s522ms 10m15s 19 4 0 10m46s 0ms 0ms 42m47s 20 14 0 4m37s 5s159ms 48s863ms 7m18s 21 7 0 1m3s 0ms 6s716ms 5m16s 22 18 0 28s144ms 9s89ms 41s36ms 3m27s 23 12 0 8s22ms 5s114ms 7s279ms 27s378ms Aug 27 00 4 0 2m30s 0ms 0ms 15s34ms 01 3 0 36m42s 0ms 0ms 7s627ms 02 3 0 6s528ms 0ms 0ms 14s506ms 03 6 0 10m48s 0ms 0ms 2m44s 04 5 0 16s654ms 0ms 0ms 55s69ms 05 8 0 6s629ms 0ms 5s66ms 14s255ms 06 10 0 17m15s 0ms 5s888ms 32m56s 07 3 0 6s222ms 0ms 0ms 11s889ms 08 2 0 6s914ms 0ms 0ms 7s89ms 09 2 0 7s162ms 0ms 0ms 7s266ms 10 10 0 7s789ms 0ms 7s135ms 38s473ms 11 6 0 8s871ms 0ms 5s605ms 23s14ms 12 7 0 5s887ms 0ms 5s83ms 12s215ms 13 4 0 6s133ms 0ms 0ms 7s4ms 14 15 0 23s131ms 7s148ms 36s209ms 1m20s 15 12 0 3m1s 0ms 7s291ms 15s479ms 16 10 0 35s363ms 0ms 12s182ms 2m34s 17 3 0 6s486ms 0ms 0ms 12s174ms 18 3 0 6s391ms 0ms 0ms 12s238ms 19 2 0 7s35ms 0ms 0ms 7s85ms 20 2 0 7s32ms 0ms 0ms 7s197ms 21 3 0 6s599ms 0ms 0ms 7s509ms 22 3 0 6s381ms 0ms 0ms 12s167ms 23 2 0 7s33ms 0ms 0ms 7s54ms Aug 28 00 5 0 1m55s 0ms 5s56ms 9m12s 01 3 0 6s334ms 0ms 0ms 12s24ms 02 6 0 8s337ms 0ms 0ms 30s892ms 03 4 0 6s161ms 0ms 0ms 12s629ms 04 4 0 6s43ms 0ms 0ms 7s118ms 05 7 0 6s203ms 0ms 5s88ms 13s756ms 06 3 0 7s476ms 0ms 0ms 8s39ms 07 2 0 6s974ms 0ms 0ms 6s968ms 08 20 0 10s625ms 0ms 17s108ms 58s481ms 09 2 0 7s1ms 0ms 0ms 7s48ms 10 6 0 7s594ms 0ms 0ms 21s591ms 11 3 0 10s66ms 0ms 0ms 16s105ms 12 2 0 6s968ms 0ms 0ms 7s38ms 13 3 0 6s746ms 0ms 0ms 6s978ms 14 2 0 6s964ms 0ms 0ms 6s989ms 15 4 0 8s682ms 0ms 7s31ms 14s433ms 16 1 0 5s349ms 0ms 0ms 5s349ms 17 0 0 0ms 0ms 0ms 0ms 18 1 0 5s7ms 0ms 0ms 5s7ms 19 1 0 5s88ms 0ms 0ms 5s88ms 20 1 0 5s102ms 0ms 0ms 5s102ms 21 1 0 5s271ms 0ms 0ms 5s271ms 22 1 0 6s298ms 0ms 0ms 6s298ms 23 1 0 5s78ms 0ms 0ms 5s78ms Aug 29 00 3 0 3m13s 0ms 0ms 9m28s 01 2 0 5s418ms 0ms 0ms 5s755ms 02 1 0 5s12ms 0ms 0ms 5s12ms 03 0 0 0ms 0ms 0ms 0ms 04 1 0 5s577ms 0ms 0ms 5s577ms 05 4 0 5s285ms 0ms 5s30ms 5s725ms 06 2 0 5s216ms 0ms 0ms 5s426ms 07 5 0 7s992ms 0ms 0ms 16s783ms 08 5 0 12s39ms 0ms 0ms 12s285ms 09 4 0 12s111ms 0ms 8s982ms 15s837ms 10 2 0 10s163ms 0ms 0ms 15s88ms 11 1 0 5s63ms 0ms 0ms 5s63ms 12 2 0 5s529ms 0ms 0ms 5s980ms 13 28 0 18s689ms 13s432ms 21s216ms 3m26s 14 15 0 10s755ms 6s323ms 18s578ms 32s930ms 15 2 0 5s524ms 0ms 0ms 5s966ms 16 0 0 0ms 0ms 0ms 0ms 17 1 0 5s382ms 0ms 0ms 5s382ms 18 1 0 5s262ms 0ms 0ms 5s262ms 19 0 0 0ms 0ms 0ms 0ms 20 1 0 5s134ms 0ms 0ms 5s134ms 21 2 0 5s503ms 0ms 0ms 5s956ms 22 1 0 5s130ms 0ms 0ms 5s130ms 23 1 0 5s11ms 0ms 0ms 5s11ms Aug 30 00 2 0 4m35s 0ms 0ms 9m6s 01 1 0 5s46ms 0ms 0ms 5s46ms 02 0 0 0ms 0ms 0ms 0ms 03 2 0 8s720ms 0ms 0ms 12s426ms 04 1 0 5s150ms 0ms 0ms 5s150ms 05 2 0 5s116ms 0ms 0ms 5s150ms 06 1 0 5s66ms 0ms 0ms 5s66ms 07 2 0 5s546ms 0ms 0ms 6s47ms 08 2 0 5s462ms 0ms 0ms 10s924ms 09 1 0 5s43ms 0ms 0ms 5s43ms 10 0 0 0ms 0ms 0ms 0ms 11 2 0 5s355ms 0ms 0ms 5s498ms 12 1 0 5s94ms 0ms 0ms 5s94ms 13 0 0 0ms 0ms 0ms 0ms 14 0 0 0ms 0ms 0ms 0ms 15 1 0 5s33ms 0ms 0ms 5s33ms 16 1 0 5s55ms 0ms 0ms 5s55ms 17 1 0 5s81ms 0ms 0ms 5s81ms 18 0 0 0ms 0ms 0ms 0ms 19 0 0 0ms 0ms 0ms 0ms 20 0 0 0ms 0ms 0ms 0ms 21 1 0 5s135ms 0ms 0ms 5s135ms 22 1 0 5s98ms 0ms 0ms 5s98ms 23 1 0 5s29ms 0ms 0ms 5s29ms Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Aug 24 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Aug 25 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Aug 26 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 1 0 0 0 9s37ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 4 0 0 0 4m59s 0ms 0ms 3m18s 17 6 0 0 0 5m46s 0ms 0ms 4m27s 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 3 5 0 0 40s76ms 0ms 0ms 1m27s Aug 27 00 4 3 0 0 4m27s 0ms 0ms 1m16s 01 1 0 0 0 2m49s 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Aug 28 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Aug 29 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Aug 30 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare Aug 24 00 0 2 2.00 0.00% 01 0 7 7.00 0.00% 02 0 0 0.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 16 16.00 0.00% 06 0 2 2.00 0.00% 07 0 2 2.00 0.00% 08 0 2 2.00 0.00% 09 0 3 3.00 0.00% 10 0 5 5.00 0.00% 11 0 2 2.00 0.00% 12 0 2 2.00 0.00% 13 0 3 3.00 0.00% 14 0 5 5.00 0.00% 15 0 2 2.00 0.00% 16 0 2 2.00 0.00% 17 0 2 2.00 0.00% 18 0 3 3.00 0.00% 19 0 2 2.00 0.00% 20 0 5 5.00 0.00% 21 0 2 2.00 0.00% 22 0 3 3.00 0.00% 23 0 3 3.00 0.00% Aug 25 00 0 2 2.00 0.00% 01 0 2 2.00 0.00% 02 0 5 5.00 0.00% 03 0 3 3.00 0.00% 04 0 2 2.00 0.00% 05 0 8 8.00 0.00% 06 0 2 2.00 0.00% 07 0 8 8.00 0.00% 08 0 2 2.00 0.00% 09 0 4 4.00 0.00% 10 0 3 3.00 0.00% 11 0 3 3.00 0.00% 12 0 3 3.00 0.00% 13 0 3 3.00 0.00% 14 0 3 3.00 0.00% 15 0 2 2.00 0.00% 16 0 18 18.00 0.00% 17 0 22 22.00 0.00% 18 0 2 2.00 0.00% 19 0 2 2.00 0.00% 20 0 2 2.00 0.00% 21 0 2 2.00 0.00% 22 0 2 2.00 0.00% 23 0 4 4.00 0.00% Aug 26 00 0 2 2.00 0.00% 01 0 2 2.00 0.00% 02 0 3 3.00 0.00% 03 0 4 4.00 0.00% 04 0 2 2.00 0.00% 05 0 9 9.00 0.00% 06 0 2 2.00 0.00% 07 0 4 4.00 0.00% 08 0 4 4.00 0.00% 09 0 5 5.00 0.00% 10 0 2 2.00 0.00% 11 0 2 2.00 0.00% 12 0 3 3.00 0.00% 13 0 5 5.00 0.00% 14 0 17 17.00 0.00% 15 0 30 30.00 0.00% 16 0 7 7.00 0.00% 17 0 13 13.00 0.00% 18 0 8 8.00 0.00% 19 0 4 4.00 0.00% 20 0 39 39.00 0.00% 21 0 7 7.00 0.00% 22 0 19 19.00 0.00% 23 0 29 29.00 0.00% Aug 27 00 0 10 10.00 0.00% 01 0 5 5.00 0.00% 02 0 3 3.00 0.00% 03 0 19 19.00 0.00% 04 0 5 5.00 0.00% 05 0 8 8.00 0.00% 06 0 10 10.00 0.00% 07 0 3 3.00 0.00% 08 0 2 2.00 0.00% 09 0 2 2.00 0.00% 10 0 4 4.00 0.00% 11 0 3 3.00 0.00% 12 0 7 7.00 0.00% 13 0 4 4.00 0.00% 14 0 14 14.00 0.00% 15 0 13 13.00 0.00% 16 0 10 10.00 0.00% 17 0 3 3.00 0.00% 18 0 3 3.00 0.00% 19 0 2 2.00 0.00% 20 0 2 2.00 0.00% 21 0 3 3.00 0.00% 22 0 3 3.00 0.00% 23 0 2 2.00 0.00% Aug 28 00 0 4 4.00 0.00% 01 0 3 3.00 0.00% 02 0 6 6.00 0.00% 03 0 4 4.00 0.00% 04 0 4 4.00 0.00% 05 0 7 7.00 0.00% 06 0 3 3.00 0.00% 07 0 2 2.00 0.00% 08 0 20 20.00 0.00% 09 0 2 2.00 0.00% 10 0 6 6.00 0.00% 11 0 3 3.00 0.00% 12 0 2 2.00 0.00% 13 0 3 3.00 0.00% 14 0 2 2.00 0.00% 15 0 4 4.00 0.00% 16 0 1 1.00 0.00% 17 0 0 0.00 0.00% 18 0 1 1.00 0.00% 19 0 1 1.00 0.00% 20 0 1 1.00 0.00% 21 0 1 1.00 0.00% 22 0 1 1.00 0.00% 23 0 1 1.00 0.00% Aug 29 00 0 2 2.00 0.00% 01 0 2 2.00 0.00% 02 0 1 1.00 0.00% 03 0 0 0.00 0.00% 04 0 1 1.00 0.00% 05 0 4 4.00 0.00% 06 0 2 2.00 0.00% 07 0 5 5.00 0.00% 08 0 5 5.00 0.00% 09 0 4 4.00 0.00% 10 0 2 2.00 0.00% 11 0 1 1.00 0.00% 12 0 1 1.00 0.00% 13 0 28 28.00 0.00% 14 0 15 15.00 0.00% 15 0 2 2.00 0.00% 16 0 0 0.00 0.00% 17 0 1 1.00 0.00% 18 0 1 1.00 0.00% 19 0 0 0.00 0.00% 20 0 1 1.00 0.00% 21 0 2 2.00 0.00% 22 0 1 1.00 0.00% 23 0 1 1.00 0.00% Aug 30 00 0 1 1.00 0.00% 01 0 1 1.00 0.00% 02 0 0 0.00 0.00% 03 0 2 2.00 0.00% 04 0 1 1.00 0.00% 05 0 2 2.00 0.00% 06 0 1 1.00 0.00% 07 0 2 2.00 0.00% 08 0 2 2.00 0.00% 09 0 1 1.00 0.00% 10 0 0 0.00 0.00% 11 0 2 2.00 0.00% 12 0 1 1.00 0.00% 13 0 0 0.00 0.00% 14 0 0 0.00 0.00% 15 0 1 1.00 0.00% 16 0 1 1.00 0.00% 17 0 1 1.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 1 1.00 0.00% 22 0 1 1.00 0.00% 23 0 1 1.00 0.00% Day Hour Count Average / Second Aug 24 00 77 0.02/s 01 106 0.03/s 02 59 0.02/s 03 64 0.02/s 04 64 0.02/s 05 87 0.02/s 06 76 0.02/s 07 77 0.02/s 08 78 0.02/s 09 82 0.02/s 10 80 0.02/s 11 80 0.02/s 12 79 0.02/s 13 88 0.02/s 14 78 0.02/s 15 82 0.02/s 16 83 0.02/s 17 83 0.02/s 18 82 0.02/s 19 82 0.02/s 20 79 0.02/s 21 82 0.02/s 22 80 0.02/s 23 77 0.02/s Aug 25 00 82 0.02/s 01 85 0.02/s 02 95 0.03/s 03 89 0.02/s 04 102 0.03/s 05 106 0.03/s 06 79 0.02/s 07 83 0.02/s 08 82 0.02/s 09 81 0.02/s 10 79 0.02/s 11 79 0.02/s 12 83 0.02/s 13 81 0.02/s 14 77 0.02/s 15 80 0.02/s 16 89 0.02/s 17 94 0.03/s 18 82 0.02/s 19 81 0.02/s 20 77 0.02/s 21 78 0.02/s 22 76 0.02/s 23 86 0.02/s Aug 26 00 80 0.02/s 01 81 0.02/s 02 80 0.02/s 03 82 0.02/s 04 81 0.02/s 05 103 0.03/s 06 86 0.02/s 07 102 0.03/s 08 80 0.02/s 09 121 0.03/s 10 79 0.02/s 11 80 0.02/s 12 84 0.02/s 13 97 0.03/s 14 138 0.04/s 15 131 0.04/s 16 79 0.02/s 17 97 0.03/s 18 81 0.02/s 19 78 0.02/s 20 89 0.02/s 21 83 0.02/s 22 120 0.03/s 23 92 0.03/s Aug 27 00 85 0.02/s 01 98 0.03/s 02 84 0.02/s 03 85 0.02/s 04 85 0.02/s 05 102 0.03/s 06 83 0.02/s 07 81 0.02/s 08 81 0.02/s 09 83 0.02/s 10 87 0.02/s 11 94 0.03/s 12 97 0.03/s 13 82 0.02/s 14 96 0.03/s 15 77 0.02/s 16 88 0.02/s 17 83 0.02/s 18 79 0.02/s 19 78 0.02/s 20 82 0.02/s 21 86 0.02/s 22 107 0.03/s 23 87 0.02/s Aug 28 00 79 0.02/s 01 80 0.02/s 02 84 0.02/s 03 80 0.02/s 04 89 0.02/s 05 96 0.03/s 06 79 0.02/s 07 76 0.02/s 08 92 0.03/s 09 78 0.02/s 10 82 0.02/s 11 80 0.02/s 12 83 0.02/s 13 84 0.02/s 14 78 0.02/s 15 103 0.03/s 16 81 0.02/s 17 80 0.02/s 18 81 0.02/s 19 80 0.02/s 20 79 0.02/s 21 80 0.02/s 22 82 0.02/s 23 88 0.02/s Aug 29 00 112 0.03/s 01 71 0.02/s 02 80 0.02/s 03 79 0.02/s 04 81 0.02/s 05 96 0.03/s 06 80 0.02/s 07 77 0.02/s 08 82 0.02/s 09 80 0.02/s 10 82 0.02/s 11 82 0.02/s 12 79 0.02/s 13 102 0.03/s 14 92 0.03/s 15 81 0.02/s 16 81 0.02/s 17 80 0.02/s 18 81 0.02/s 19 80 0.02/s 20 79 0.02/s 21 77 0.02/s 22 81 0.02/s 23 78 0.02/s Aug 30 00 72 0.02/s 01 83 0.02/s 02 82 0.02/s 03 86 0.02/s 04 81 0.02/s 05 98 0.03/s 06 73 0.02/s 07 80 0.02/s 08 78 0.02/s 09 81 0.02/s 10 83 0.02/s 11 83 0.02/s 12 78 0.02/s 13 77 0.02/s 14 77 0.02/s 15 80 0.02/s 16 97 0.03/s 17 79 0.02/s 18 82 0.02/s 19 79 0.02/s 20 80 0.02/s 21 78 0.02/s 22 80 0.02/s 23 76 0.02/s Day Hour Count Average Duration Average idle time Aug 24 00 77 29m44s 29m37s 01 106 21m1s 21m 02 59 30m40s 30m40s 03 64 30m38s 30m38s 04 64 30m41s 30m41s 05 87 47m30s 47m29s 06 76 30m44s 30m44s 07 77 31m9s 31m9s 08 78 31m3s 31m3s 09 82 30m14s 30m14s 10 80 29m17s 28m59s 11 80 30m38s 30m38s 12 79 30m19s 30m19s 13 88 29m15s 29m15s 14 78 27m37s 27m37s 15 82 29m34s 29m34s 16 83 29m59s 29m58s 17 83 29m34s 29m33s 18 82 29m30s 29m30s 19 82 29m53s 29m53s 20 79 30m19s 30m18s 21 82 29m55s 29m55s 22 80 29m28s 29m28s 23 77 28m41s 28m41s Aug 25 00 82 29m26s 29m19s 01 85 27m33s 27m32s 02 95 25m33s 25m33s 03 89 27m47s 27m47s 04 102 23m37s 23m37s 05 106 21m57s 21m56s 06 79 29m37s 29m37s 07 83 29m58s 29m58s 08 82 29m53s 29m53s 09 81 29m33s 29m32s 10 79 30m27s 30m27s 11 79 30m53s 30m53s 12 83 29m16s 29m16s 13 81 29m55s 29m55s 14 77 30m22s 30m22s 15 80 31m16s 31m16s 16 89 26m16s 26m14s 17 94 25m25s 25m22s 18 82 29m30s 29m29s 19 81 29m33s 29m32s 20 77 30m27s 30m26s 21 78 28m42s 28m42s 22 76 30m23s 30m22s 23 86 28m57s 28m57s Aug 26 00 80 29m47s 29m40s 01 81 30m8s 30m8s 02 80 30m3s 30m3s 03 82 29m35s 29m35s 04 81 29m56s 29m56s 05 103 24m4s 24m3s 06 86 27m48s 27m48s 07 102 23m56s 23m56s 08 80 30m21s 30m20s 09 121 20m26s 20m26s 10 79 29m41s 29m41s 11 80 30m6s 30m6s 12 84 29m11s 29m11s 13 95 25m17s 25m17s 14 137 17m52s 17m49s 15 132 18m27s 18m16s 16 77 29m35s 29m17s 17 97 26m42s 25m59s 18 81 29m48s 29m38s 19 78 29m21s 28m48s 20 92 40m18s 39m22s 21 83 26m42s 26m37s 22 120 20m48s 20m44s 23 92 25m31s 25m13s Aug 27 00 85 28m59s 28m30s 01 98 24m58s 23m49s 02 84 29m24s 29m24s 03 85 28m46s 27m23s 04 85 28m25s 28m24s 05 102 24m18s 24m17s 06 84 33m11s 31m8s 07 81 29m51s 29m51s 08 81 29m18s 29m18s 09 83 30m16s 30m16s 10 86 27m45s 27m44s 11 89 26m37s 26m36s 12 97 23m44s 23m44s 13 82 29m30s 29m29s 14 95 25m4s 25m 15 77 31m34s 31m6s 16 86 28m51s 28m47s 17 83 29m26s 29m26s 18 83 38m54s 38m54s 19 83 57m53s 57m53s 20 82 29m20s 29m19s 21 86 28m13s 28m13s 22 107 21m7s 21m7s 23 87 26m48s 26m47s Aug 28 00 79 29m39s 29m32s 01 80 30m27s 30m27s 02 84 29m20s 29m19s 03 80 29m6s 29m6s 04 89 28m4s 28m4s 05 96 25m32s 25m32s 06 79 29m23s 29m23s 07 76 30m36s 30m36s 08 92 27m3s 27m1s 09 78 30m27s 30m27s 10 82 30m12s 30m11s 11 80 29m39s 29m38s 12 83 30m13s 30m12s 13 84 27m28s 27m27s 14 78 31m22s 31m22s 15 103 22m34s 22m34s 16 81 30m14s 30m14s 17 80 30m20s 30m20s 18 81 30m12s 30m12s 19 80 30m21s 30m21s 20 79 30m26s 30m26s 21 80 30m59s 30m59s 22 82 29m59s 29m59s 23 88 27m20s 27m20s Aug 29 00 112 21m58s 21m53s 01 71 29m21s 29m21s 02 80 29m56s 29m56s 03 79 30m13s 30m13s 04 81 29m22s 29m22s 05 96 24m32s 24m31s 06 80 29m46s 29m46s 07 77 30m9s 30m9s 08 82 29m56s 29m55s 09 80 30m35s 30m35s 10 82 29m58s 29m57s 11 79 30m29s 30m29s 12 77 30m50s 30m50s 13 100 24m12s 24m2s 14 92 26m3s 26m1s 15 81 30m3s 30m2s 16 81 30m1s 30m1s 17 87 52m43s 52m43s 18 81 29m58s 29m58s 19 80 30m28s 30m28s 20 79 29m46s 29m46s 21 77 30m22s 30m22s 22 81 29m31s 29m31s 23 78 31m9s 31m9s Aug 30 00 72 30m24s 30m16s 01 83 29m7s 29m7s 02 82 30m 30m 03 86 29m9s 29m9s 04 81 29m34s 29m34s 05 98 25m2s 25m2s 06 73 30m31s 30m31s 07 80 29m59s 29m59s 08 78 31m29s 31m29s 09 81 30m1s 30m1s 10 83 28m14s 28m14s 11 83 29m41s 29m41s 12 78 30m 30m 13 77 31m5s 31m5s 14 77 31m10s 31m10s 15 80 30m56s 30m56s 16 97 25m36s 25m36s 17 79 30m33s 30m33s 18 82 29m46s 29m46s 19 79 30m28s 30m28s 20 80 30m 30m 21 78 29m11s 29m11s 22 80 30m52s 30m52s 23 76 28m30s 28m30s -
Connections
Established Connections
Key values
- 18 connections Connection Peak
- 2025-08-28 13:45:02 Date
Connections per database
Key values
- ctdprd51 Main Database
- 14,175 connections Total
Connections per user
Key values
- pubeu Main User
- 14,175 connections Total
-
Sessions
Simultaneous sessions
Key values
- 151 sessions Session Peak
- 2025-08-27 00:35:44 Date
Histogram of session times
Key values
- 12,466 1800000-3600000ms duration
Sessions per database
Key values
- ctdprd51 Main Database
- 14,175 sessions Total
Sessions per user
Key values
- pubeu Main User
- 14,175 sessions Total
Sessions per host
Key values
- 10.12.5.53 Main Host
- 14,175 sessions Total
Sessions per application
Key values
- unknown Main Application
- 14,175 sessions Total
-
Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 5,284,902 buffers Checkpoint Peak
- 2025-08-26 23:34:15 Date
- 1619.985 seconds Highest write time
- 0.780 seconds Sync time
Checkpoints Wal files
Key values
- 693 files Wal files usage Peak
- 2025-08-27 03:22:55 Date
Checkpoints distance
Key values
- 19,088.51 Mo Distance Peak
- 2025-08-26 23:11:24 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time Aug 24 00 793 79.63s 0.004s 79.711s 01 190 19.214s 0.002s 19.244s 02 0 0s 0s 0s 03 0 0s 0s 0s 04 0 0s 0s 0s 05 2 0.382s 0.001s 0.397s 06 1,461 146.502s 0.003s 146.533s 07 376 37.752s 0.002s 37.782s 08 441 44.374s 0.002s 44.453s 09 119 12.099s 0.002s 12.129s 10 125 12.725s 0.002s 12.755s 11 114 11.626s 0.002s 11.656s 12 154 15.604s 0.002s 15.633s 13 368 37.043s 0.002s 37.074s 14 442 44.342s 0.003s 44.373s 15 103 10.526s 0.002s 10.556s 16 48 5.09s 0.002s 5.12s 17 101 10.292s 0.002s 10.322s 18 56 5.803s 0.002s 5.833s 19 111 11.3s 0.002s 11.33s 20 52 5.388s 0.002s 5.42s 21 778 78.109s 0.003s 78.186s 22 106 10.715s 0.001s 10.73s 23 52,415 1,627.63s 0.003s 1,627.821s Aug 25 00 819 82.127s 0.003s 82.199s 01 148 15.008s 0.002s 15.039s 02 159 16.111s 0.002s 16.141s 03 1,795 180.052s 0.003s 180.13s 04 173 17.595s 0.002s 17.625s 05 1,468 147.234s 0.003s 147.265s 06 330 33.14s 0.003s 33.219s 07 137 13.906s 0.002s 13.936s 08 365 36.726s 0.003s 36.757s 09 110 11.195s 0.002s 11.225s 10 1,467 147.053s 0.002s 147.083s 11 218 22.012s 0.002s 22.086s 12 1,543 154.697s 0.003s 154.727s 13 242 24.404s 0.002s 24.434s 14 306 30.838s 0.002s 30.867s 15 390 39.254s 0.002s 39.284s 16 197 19.897s 0.002s 19.927s 17 2,003 200.708s 0.002s 200.788s 18 180 18.192s 0.002s 18.222s 19 44 4.487s 0.001s 4.502s 20 67 6.877s 0.002s 6.914s 21 134 13.521s 0.002s 13.551s 22 184 18.585s 0.002s 18.615s 23 96 9.803s 0.002s 9.834s Aug 26 00 2,932 293.8s 0.004s 293.877s 01 80 8.171s 0.002s 8.201s 02 5,545 555.186s 0.002s 555.267s 03 146 14.789s 0.002s 14.817s 04 144 14.484s 0.002s 14.513s 05 106 10.781s 0.002s 10.81s 06 304 30.641s 0.002s 30.67s 07 408 41.055s 0.002s 41.085s 08 53,196 1,626.311s 0.003s 1,626.491s 09 5,695 570.194s 0.003s 570.276s 10 57,142 1,621.264s 0.003s 1,621.439s 11 1,571 157.486s 0.003s 157.517s 12 2,739 274.494s 0.004s 274.617s 13 56,027 1,619.47s 0.152s 1,619.79s 14 22,599 1,619.432s 0.104s 1,619.73s 15 278,507 2,176.928s 0.881s 2,213.255s 16 2,252,131 3,520.823s 1.546s 3,564.178s 17 1,701,073 3,009.662s 0.295s 3,023.334s 18 262,764 1,619.402s 0.015s 1,621.75s 19 34,512 1,630.735s 0.003s 1,630.824s 20 90,065 69.441s 1.732s 108.942s 21 750,284 3,238.799s 0.016s 3,248.342s 22 405,845 2,079.934s 0.01s 2,086.733s 23 10,408,434 2,912.628s 0.157s 2,953.878s Aug 27 00 1,519,026 2,036.854s 0.338s 2,051.407s 01 956,633 1,632.982s 0.003s 1,636.008s 02 1,014,413 1,619.119s 0.014s 1,621.71s 03 838,196 2,347.526s 4.34s 2,530.033s 04 463,968 1,619.619s 0.008s 1,626.168s 05 163,388 3,238.896s 0.006s 3,243.026s 06 612,081 2,703.311s 0.046s 2,710.035s 07 602,511 1,667.764s 0.004s 1,672.365s 08 1,257 126.11s 0.003s 126.139s 09 169 17.003s 0.002s 17.032s 10 507 50.963s 0.002s 50.992s 11 25,325 1,619.049s 0.001s 1,619.157s 12 9,086 910.181s 0.003s 910.331s 13 20,678 1,619.304s 0.002s 1,619.394s 14 1,006 100.952s 0.002s 100.984s 15 3,328 333.531s 0.003s 333.606s 16 323 32.528s 0.002s 32.558s 17 1,922 192.57s 0.003s 192.603s 18 74 7.507s 0.002s 7.537s 19 128 13.003s 0.002s 13.033s 20 81 8.286s 0.002s 8.318s 21 18,386 1,620.319s 0.002s 1,620.418s 22 176 17.606s 0.002s 17.637s 23 79 8.096s 0.002s 8.127s Aug 28 00 8,719 893.32s 0.003s 893.401s 01 640 64.277s 0.002s 64.348s 02 265 26.78s 0.002s 26.811s 03 93 9.44s 0.001s 9.456s 04 25,260 2,175.31s 0.005s 2,175.479s 05 10,796 1,080.767s 0.003s 1,080.896s 06 4,813 482.115s 0.003s 482.196s 07 431 43.351s 0.002s 43.383s 08 3,739 374.426s 0.003s 374.504s 09 224 22.614s 0.002s 22.645s 10 81 8.287s 0.002s 8.318s 11 3,457 346.19s 0.003s 346.261s 12 306 30.821s 0.002s 30.853s 13 100 10.194s 0.002s 10.225s 14 64 6.487s 0.002s 6.518s 15 681 68.301s 0.003s 68.332s 16 454 45.656s 0.003s 45.688s 17 591 59.371s 0.002s 59.403s 18 514 51.663s 0.003s 51.696s 19 653 65.582s 0.003s 65.614s 20 479 48.195s 0.002s 48.268s 21 5,068 507.517s 0.003s 507.555s 22 421 42.354s 0.002s 42.383s 23 458 46.106s 0.004s 46.137s Aug 29 00 2,314 261.661s 0.006s 261.735s 01 392 39.484s 0.002s 39.514s 02 1,307 131.191s 0.003s 131.222s 03 953 95.65s 0.003s 95.682s 04 541 54.308s 0.003s 54.38s 05 470 47.263s 0.002s 47.294s 06 457 46.004s 0.002s 46.035s 07 788 79.134s 0.003s 79.165s 08 1,136 113.973s 0.003s 114.001s 09 1,288 129.118s 0.002s 129.148s 10 496 49.885s 0.002s 49.957s 11 411 41.358s 0.002s 41.387s 12 394 39.655s 0.002s 39.686s 13 3,525 558.138s 0.005s 558.321s 14 724 72.606s 0.002s 72.637s 15 493 49.573s 0.003s 49.603s 16 368 37.066s 0.004s 37.098s 17 242 24.442s 0.003s 24.473s 18 375 37.767s 0.002s 37.8s 19 482 48.474s 0.003s 48.505s 20 360 36.259s 0.003s 36.291s 21 23,334 1,619.333s 0.001s 1,619.443s 22 1,033 103.447s 0.003s 103.478s 23 1,064 106.456s 0.004s 106.488s Aug 30 00 3,236 371.558s 0.006s 371.645s 01 359 36.146s 0.002s 36.175s 02 7,270 728.09s 0.004s 728.142s 03 264 26.537s 0.002s 26.568s 04 395 39.759s 0.002s 39.79s 05 605 60.783s 0.002s 60.815s 06 4,480 448.678s 0.004s 448.812s 07 285 28.729s 0.002s 28.759s 08 302 30.451s 0.002s 30.482s 09 235 23.529s 0.002s 23.561s 10 296 29.837s 0.002s 29.869s 11 2,047 205.219s 0.003s 205.262s 12 4,412 441.765s 0.002s 441.797s 13 414 41.662s 0.002s 41.695s 14 363 36.564s 0.004s 36.597s 15 262 26.35s 0.001s 26.365s 16 459 46.16s 0.002s 46.19s 17 545 54.679s 0.002s 54.758s 18 548 55.066s 0.002s 55.096s 19 355 35.737s 0.002s 35.768s 20 213 21.523s 0.002s 21.554s 21 344 34.637s 0.002s 34.668s 22 374 37.641s 0.002s 37.673s 23 258 26.027s 0.002s 26.058s Day Hour Added Removed Recycled Synced files Longest sync Average sync Aug 24 00 0 1 0 58 0.001s 0.002s 01 0 0 0 36 0.001s 0.002s 02 0 0 0 0 0s 0s 03 0 0 0 0 0s 0s 04 0 0 0 0 0s 0s 05 0 0 0 1 0.001s 0.001s 06 0 0 0 126 0.001s 0.002s 07 0 0 0 114 0.001s 0.002s 08 0 1 0 124 0.001s 0.002s 09 0 0 0 22 0.001s 0.002s 10 0 0 0 22 0.001s 0.002s 11 0 0 0 22 0.001s 0.002s 12 0 0 0 18 0.001s 0.002s 13 0 0 0 118 0.001s 0.002s 14 0 0 0 122 0.001s 0.002s 15 0 0 0 19 0.001s 0.002s 16 0 0 0 13 0.001s 0.002s 17 0 0 0 21 0.001s 0.002s 18 0 0 0 13 0.001s 0.002s 19 0 0 0 22 0.001s 0.002s 20 0 0 0 13 0.001s 0.002s 21 0 1 0 26 0.001s 0.002s 22 0 0 0 13 0.001s 0.001s 23 0 35 0 32 0.001s 0.003s Aug 25 00 0 0 0 73 0.001s 0.002s 01 0 0 0 31 0.001s 0.002s 02 0 0 0 34 0.001s 0.002s 03 0 1 0 42 0.001s 0.002s 04 0 0 0 27 0.001s 0.002s 05 0 0 0 43 0.001s 0.002s 06 0 1 0 110 0.001s 0.002s 07 0 0 0 37 0.001s 0.002s 08 0 0 0 42 0.001s 0.002s 09 0 0 0 23 0.001s 0.002s 10 0 0 0 44 0.001s 0.002s 11 0 1 0 29 0.001s 0.002s 12 0 0 0 27 0.001s 0.002s 13 0 0 0 108 0.001s 0.002s 14 0 0 0 97 0.001s 0.002s 15 0 0 0 108 0.001s 0.002s 16 0 0 0 61 0.001s 0.002s 17 0 1 0 33 0.001s 0.002s 18 0 0 0 22 0.001s 0.002s 19 0 0 0 8 0.001s 0.001s 20 0 0 0 13 0.001s 0.002s 21 0 0 0 21 0.001s 0.002s 22 0 0 0 17 0.001s 0.002s 23 0 0 0 15 0.001s 0.002s Aug 26 00 0 1 0 71 0.001s 0.002s 01 0 0 0 19 0.001s 0.002s 02 0 4 0 38 0.001s 0.002s 03 0 0 0 27 0.001s 0.002s 04 0 0 0 27 0.001s 0.002s 05 0 0 0 22 0.001s 0.002s 06 0 0 0 76 0.001s 0.002s 07 0 0 0 123 0.001s 0.002s 08 0 36 0 86 0.001s 0.002s 09 0 4 0 38 0.001s 0.002s 10 0 38 0 40 0.001s 0.002s 11 0 0 0 27 0.001s 0.002s 12 0 2 0 44 0.001s 0.002s 13 0 37 0 585 0.001s 0.001s 14 0 18 0 145 0.033s 0.001s 15 0 159 2,667 413 0.443s 0.013s 16 0 28 3,222 477 0.725s 0.023s 17 0 0 1,076 168 0.113s 0.014s 18 0 0 183 246 0.001s 0.001s 19 0 0 0 80 0.001s 0.002s 20 0 33 2,694 148 0.779s 0.076s 21 0 0 775 151 0.001s 0.002s 22 0 24 550 82 0.001s 0.002s 23 0 256 2,859 644 0.040s 0.006s Aug 27 00 0 1 1,075 166 0.324s 0.007s 01 0 0 238 96 0.001s 0.003s 02 0 137 177 86 0.011s 0.001s 03 0 61 12,507 1,041 0.774s 0.21s 04 0 0 538 172 0.001s 0.001s 05 0 2 320 83 0.001s 0.002s 06 0 32 538 171 0.024s 0.002s 07 0 0 372 248 0.001s 0.003s 08 0 0 0 86 0.001s 0.002s 09 0 0 0 26 0.001s 0.002s 10 0 0 0 37 0.001s 0.002s 11 0 10 0 34 0.001s 0.001s 12 0 4 0 58 0.001s 0.002s 13 0 10 0 45 0.001s 0.001s 14 0 0 0 43 0.001s 0.002s 15 0 2 0 80 0.001s 0.002s 16 0 0 0 74 0.001s 0.002s 17 0 1 0 35 0.001s 0.002s 18 0 0 0 16 0.001s 0.002s 19 0 0 0 22 0.001s 0.002s 20 0 0 0 15 0.001s 0.002s 21 0 11 0 33 0.001s 0.002s 22 0 0 0 25 0.001s 0.002s 23 0 0 0 15 0.001s 0.002s Aug 28 00 0 4 0 84 0.001s 0.002s 01 0 1 0 37 0.001s 0.002s 02 0 0 0 36 0.001s 0.002s 03 0 0 0 17 0.001s 0.001s 04 0 16 0 70 0.001s 0.003s 05 0 5 0 52 0.001s 0.002s 06 0 2 0 103 0.001s 0.002s 07 0 0 0 127 0.001s 0.002s 08 0 3 0 87 0.001s 0.002s 09 0 0 0 38 0.001s 0.002s 10 0 0 0 17 0.001s 0.002s 11 0 1 0 41 0.001s 0.002s 12 0 0 0 33 0.001s 0.002s 13 0 0 0 16 0.001s 0.002s 14 0 0 0 15 0.001s 0.002s 15 0 0 0 84 0.001s 0.002s 16 0 0 0 19 0.002s 0.002s 17 0 0 0 29 0.001s 0.002s 18 0 0 0 21 0.001s 0.002s 19 0 0 0 20 0.001s 0.002s 20 0 1 0 30 0.001s 0.002s 21 0 3 0 41 0.001s 0.002s 22 0 0 0 23 0.001s 0.002s 23 0 0 0 32 0.001s 0.002s Aug 29 00 0 1 0 98 0.001s 0.002s 01 0 0 0 26 0.001s 0.002s 02 0 0 0 39 0.001s 0.002s 03 0 0 0 36 0.001s 0.002s 04 0 1 0 34 0.001s 0.002s 05 0 0 0 30 0.001s 0.002s 06 0 0 0 29 0.001s 0.002s 07 0 0 0 134 0.001s 0.002s 08 0 0 0 131 0.001s 0.002s 09 0 0 0 70 0.001s 0.002s 10 0 1 0 38 0.001s 0.002s 11 0 0 0 28 0.001s 0.002s 12 0 0 0 31 0.001s 0.002s 13 0 33 0 84 0.001s 0.002s 14 0 0 0 38 0.001s 0.002s 15 0 0 0 21 0.001s 0.002s 16 0 0 0 27 0.001s 0.002s 17 0 0 0 19 0.001s 0.002s 18 0 0 0 19 0.001s 0.002s 19 0 0 0 30 0.001s 0.002s 20 0 0 0 20 0.001s 0.002s 21 0 16 0 30 0.001s 0.001s 22 0 0 0 38 0.001s 0.002s 23 0 0 0 27 0.001s 0.002s Aug 30 00 0 2 0 84 0.001s 0.002s 01 0 0 0 32 0.001s 0.002s 02 0 3 0 48 0.001s 0.002s 03 0 0 0 28 0.001s 0.002s 04 0 0 0 28 0.001s 0.002s 05 0 0 0 31 0.001s 0.002s 06 0 3 0 56 0.001s 0.002s 07 0 0 0 21 0.001s 0.002s 08 0 0 0 29 0.001s 0.002s 09 0 0 0 27 0.001s 0.002s 10 0 0 0 21 0.001s 0.002s 11 0 1 0 37 0.001s 0.002s 12 0 0 0 24 0.001s 0.002s 13 0 0 0 27 0.001s 0.002s 14 0 0 0 23 0.001s 0.002s 15 0 0 0 11 0.001s 0.001s 16 0 0 0 26 0.001s 0.002s 17 0 1 0 19 0.001s 0.002s 18 0 0 0 27 0.001s 0.002s 19 0 0 0 20 0.001s 0.002s 20 0 0 0 19 0.001s 0.002s 21 0 0 0 29 0.001s 0.002s 22 0 0 0 23 0.001s 0.002s 23 0 0 0 19 0.001s 0.002s Day Hour Count Avg time (sec) Aug 24 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 25 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 26 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 27 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 28 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 29 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 30 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Day Hour Mean distance Mean estimate Aug 24 00 2,562.50 kB 167,327.00 kB 01 522.00 kB 135,686.00 kB 02 0.00 kB 0.00 kB 03 0.00 kB 0.00 kB 04 0.00 kB 0.00 kB 05 12.00 kB 115,706.00 kB 06 5,042.00 kB 99,777.00 kB 07 1,157.50 kB 81,096.50 kB 08 1,412.50 kB 65,935.50 kB 09 290.50 kB 53,520.00 kB 10 336.50 kB 43,412.50 kB 11 321.50 kB 35,228.00 kB 12 327.50 kB 28,610.50 kB 13 1,154.50 kB 23,355.50 kB 14 1,389.00 kB 19,178.50 kB 15 312.00 kB 15,636.00 kB 16 145.00 kB 12,693.00 kB 17 304.50 kB 10,339.00 kB 18 164.50 kB 8,405.00 kB 19 319.00 kB 6,869.00 kB 20 146.00 kB 5,592.50 kB 21 2,377.00 kB 4,979.00 kB 22 639.00 kB 4,313.00 kB 23 191,846.33 kB 519,489.33 kB Aug 25 00 2,572.00 kB 398,718.00 kB 01 414.50 kB 323,085.00 kB 02 441.50 kB 261,781.50 kB 03 5,440.50 kB 212,627.50 kB 04 522.00 kB 172,773.50 kB 05 4,830.00 kB 140,488.50 kB 06 940.00 kB 114,342.50 kB 07 488.50 kB 92,734.00 kB 08 1,299.00 kB 75,270.50 kB 09 323.50 kB 61,121.50 kB 10 4,903.00 kB 50,418.00 kB 11 712.00 kB 40,994.50 kB 12 4,579.50 kB 34,077.00 kB 13 667.00 kB 27,699.00 kB 14 873.50 kB 22,600.00 kB 15 1,069.50 kB 18,494.00 kB 16 539.50 kB 15,112.50 kB 17 6,404.00 kB 12,925.50 kB 18 522.50 kB 11,120.50 kB 19 298.00 kB 9,514.00 kB 20 202.50 kB 8,168.50 kB 21 398.50 kB 6,691.00 kB 22 409.00 kB 5,496.50 kB 23 272.00 kB 4,506.00 kB Aug 26 00 7,131.00 kB 11,690.50 kB 01 197.00 kB 9,598.00 kB 02 29,397.50 kB 33,311.50 kB 03 392.00 kB 49,989.00 kB 04 367.00 kB 40,571.00 kB 05 312.00 kB 32,921.50 kB 06 964.50 kB 26,808.00 kB 07 1,186.00 kB 21,947.50 kB 08 291,567.00 kB 553,554.00 kB 09 29,625.50 kB 454,005.00 kB 10 313,295.50 kB 595,149.00 kB 11 4,600.50 kB 482,550.50 kB 12 9,206.50 kB 392,511.50 kB 13 602,378.00 kB 602,378.00 kB 14 309,070.00 kB 573,047.00 kB 15 7,687,815.33 kB 7,691,574.00 kB 16 8,815,869.67 kB 8,826,652.67 kB 17 8,812,462.00 kB 8,822,245.50 kB 18 3,523,826.00 kB 8,291,825.00 kB 19 953.00 kB 7,089,665.50 kB 20 7,390,815.17 kB 8,494,236.00 kB 21 6,519,375.00 kB 8,734,395.00 kB 22 4,433,333.00 kB 8,236,858.00 kB 23 8,506,156.33 kB 9,364,468.67 kB Aug 27 00 8,814,262.00 kB 9,411,700.50 kB 01 1,476,912.33 kB 8,026,339.00 kB 02 4,621,472.00 kB 6,939,527.00 kB 03 8,579,406.17 kB 8,822,980.54 kB 04 8,819,588.00 kB 9,079,651.00 kB 05 2,778,101.00 kB 8,243,586.50 kB 06 4,530,751.00 kB 7,957,063.00 kB 07 2,204,287.67 kB 7,760,125.00 kB 08 3,998.00 kB 5,949,963.00 kB 09 400.00 kB 4,819,838.50 kB 10 1,324.00 kB 3,904,238.00 kB 11 150,352.00 kB 3,344,007.00 kB 12 38,253.00 kB 2,864,008.50 kB 13 163,702.00 kB 2,460,826.00 kB 14 1,301.00 kB 2,104,167.00 kB 15 13,943.00 kB 1,707,085.00 kB 16 802.50 kB 1,382,913.00 kB 17 5,895.50 kB 1,121,281.00 kB 18 201.50 kB 908,277.00 kB 19 345.50 kB 735,769.50 kB 20 251.50 kB 596,019.50 kB 21 92,688.00 kB 500,383.50 kB 22 481.00 kB 405,402.50 kB 23 244.00 kB 328,424.00 kB Aug 28 00 32,784.50 kB 269,548.50 kB 01 1,741.50 kB 221,366.00 kB 02 760.50 kB 179,421.00 kB 03 539.00 kB 153,074.00 kB 04 86,915.33 kB 184,272.00 kB 05 46,487.50 kB 150,587.50 kB 06 14,843.50 kB 127,678.00 kB 07 1,308.50 kB 103,748.50 kB 08 19,380.50 kB 87,784.00 kB 09 720.00 kB 71,213.50 kB 10 230.50 kB 57,756.00 kB 11 11,765.50 kB 49,020.50 kB 12 735.00 kB 39,821.50 kB 13 230.50 kB 32,324.00 kB 14 188.00 kB 26,217.00 kB 15 683.00 kB 21,340.50 kB 16 181.50 kB 17,348.50 kB 17 350.00 kB 14,117.50 kB 18 195.50 kB 11,472.00 kB 19 235.00 kB 9,333.50 kB 20 368.00 kB 7,632.50 kB 21 25,428.00 kB 28,547.00 kB 22 573.50 kB 43,320.00 kB 23 467.00 kB 35,182.00 kB Aug 29 00 8,292.00 kB 29,878.00 kB 01 234.00 kB 24,445.00 kB 02 4,826.00 kB 20,306.00 kB 03 477.50 kB 16,936.50 kB 04 449.50 kB 13,802.00 kB 05 309.00 kB 11,252.00 kB 06 516.00 kB 9,213.50 kB 07 1,127.00 kB 7,637.50 kB 08 2,431.00 kB 6,644.50 kB 09 3,361.50 kB 6,306.00 kB 10 782.00 kB 5,242.50 kB 11 179.50 kB 4,295.00 kB 12 326.50 kB 3,541.50 kB 13 274,646.50 kB 387,480.50 kB 14 735.00 kB 320,686.00 kB 15 203.00 kB 259,823.00 kB 16 321.50 kB 210,518.00 kB 17 168.50 kB 170,550.50 kB 18 158.00 kB 138,176.00 kB 19 455.00 kB 112,010.00 kB 20 187.50 kB 90,764.00 kB 21 253,242.00 kB 253,242.00 kB 22 2,103.00 kB 216,765.00 kB 23 2,318.00 kB 176,173.50 kB Aug 30 00 12,123.50 kB 144,927.50 kB 01 345.50 kB 117,532.00 kB 02 28,051.00 kB 100,527.00 kB 03 335.00 kB 81,494.50 kB 04 334.50 kB 66,074.50 kB 05 314.00 kB 53,566.00 kB 06 21,831.00 kB 45,641.50 kB 07 151.50 kB 38,908.00 kB 08 365.00 kB 31,585.00 kB 09 357.50 kB 25,651.00 kB 10 158.50 kB 20,807.00 kB 11 8,413.00 kB 17,729.50 kB 12 325.00 kB 15,146.00 kB 13 328.50 kB 12,333.00 kB 14 405.50 kB 10,065.00 kB 15 342.00 kB 8,619.00 kB 16 353.00 kB 7,434.50 kB 17 157.50 kB 6,052.00 kB 18 347.00 kB 4,968.50 kB 19 153.50 kB 4,053.00 kB 20 158.00 kB 3,313.50 kB 21 391.00 kB 2,756.00 kB 22 236.50 kB 2,275.50 kB 23 177.50 kB 1,880.00 kB -
Temporary Files
Size of temporary files
Key values
- 20.00 GiB Temp Files size Peak
- 2025-08-26 20:20:27 Date
Number of temporary files
Key values
- 20 per second Temp Files Peak
- 2025-08-26 20:38:52 Date
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size Aug 24 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Aug 25 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Aug 26 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 428 8.11 GiB 19.41 MiB 15 800 55.30 GiB 70.79 MiB 16 115 6.23 GiB 55.51 MiB 17 0 0 0 18 28 27.14 GiB 992.57 MiB 19 55 54.64 GiB 1017.35 MiB 20 341 194.31 GiB 583.51 MiB 21 10 7.96 GiB 815.04 MiB 22 210 18.11 GiB 88.33 MiB 23 131 32.93 GiB 257.42 MiB Aug 27 00 0 0 0 01 0 0 0 02 0 0 0 03 1,014 165.95 GiB 167.59 MiB 04 0 0 0 05 0 0 0 06 9 8.54 GiB 971.73 MiB 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 44 43.55 GiB 1013.58 MiB 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Aug 28 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Aug 29 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Aug 30 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Queries generating the most temporary files (N)
Rank Count Total size Min size Max size Avg size Query 1 1,413 88.40 GiB 8.00 KiB 1.00 GiB 64.06 MiB select * from pgbulkload.pg_bulkload (?);-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.GENE_DISEASE_REFERENCE,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.log,parse-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.DUPE}');
Date: 2025-08-26 20:32:46 Duration: 7m18s Database: ctdprd51 User: load Application: pg_bulkload
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.DAG_PATH,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.log,parse-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.DUPE}');
Date: 2025-08-26 21:04:39 Duration: 5m16s
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=edit.DB_LINK,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.log,parse-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.DUPE}');
Date: 2025-08-26 14:58:44 Duration: 4m22s
2 932 163.18 GiB 120.00 KiB 1.00 GiB 179.29 MiB vacuum full analyze;-
VACUUM FULL ANALYZE;
Date: 2025-08-27 03:55:44 Duration: 48m52s
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VACUUM FULL ANALYZE;
Date: 2025-08-27 03:06:53 Duration: 0ms
3 85 84.26 GiB 263.49 MiB 1.00 GiB 1015.05 MiB select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.gene_go_annot gga, pub2.phenotype_term_reference ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in;-
select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.GENE_GO_ANNOT gga, pub2.PHENOTYPE_TERM_REFERENCE ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in;
Date: 2025-08-26 20:20:24 Duration: 0ms
4 62 2.03 GiB 6.42 MiB 1.00 GiB 33.56 MiB cluster pub2.term;-
CLUSTER pub2.TERM;
Date: 2025-08-27 03:06:13 Duration: 1m2s
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CLUSTER pub2.TERM;
Date: 2025-08-27 03:05:20 Duration: 0ms
5 55 54.64 GiB 658.40 MiB 1.00 GiB 1017.35 MiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.object_type where cd = ?), ptr.term_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.phenotype_term_reference ptr, pub2.phenotype_term_reference ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;-
select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;
Date: 2025-08-26 19:29:51 Duration: 0ms
6 35 4.44 GiB 71.73 MiB 171.87 MiB 129.94 MiB vacuum full analyze db_link;-
vacuum FULL analyze db_link;
Date: 2025-08-26 16:04:24 Duration: 1m58s
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vacuum FULL analyze db_link;
Date: 2025-08-26 16:02:48 Duration: 0ms
7 35 1.20 GiB 21.12 MiB 52.61 MiB 34.97 MiB vacuum full analyze ixn_actor;-
vacuum FULL analyze ixn_actor;
Date: 2025-08-26 16:01:53 Duration: 25s55ms
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vacuum FULL analyze ixn_actor;
Date: 2025-08-26 16:01:34 Duration: 0ms
8 25 17.43 GiB 8.00 KiB 1.00 GiB 714.03 MiB alter table pub2.term_enrichment_agent add constraint term_enrichment_agent_pk primary key (term_id, enriched_term_id, agent_term_id);-
ALTER TABLE pub2.term_enrichment_agent ADD CONSTRAINT term_enrichment_agent_pk PRIMARY KEY (term_id, enriched_term_id, agent_term_id);
Date: 2025-08-26 23:11:25 Duration: 3m12s
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ALTER TABLE pub2.term_enrichment_agent ADD CONSTRAINT term_enrichment_agent_pk PRIMARY KEY (term_id, enriched_term_id, agent_term_id);
Date: 2025-08-26 23:11:24 Duration: 0ms
9 25 393.71 MiB 9.94 MiB 20.22 MiB 15.75 MiB vacuum full analyze ixn;-
vacuum FULL analyze ixn;
Date: 2025-08-26 16:02:09 Duration: 7s926ms
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vacuum FULL analyze ixn;
Date: 2025-08-26 16:02:04 Duration: 0ms
10 20 13.37 GiB 8.00 KiB 1.00 GiB 684.53 MiB create unique index gene_disease_reference_ak1 on pub2.gene_disease_reference using btree (gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id);-
CREATE UNIQUE INDEX gene_disease_reference_ak1 ON pub2.gene_disease_reference USING btree (gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id);
Date: 2025-08-26 20:38:52 Duration: 3m21s
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CREATE UNIQUE INDEX gene_disease_reference_ak1 ON pub2.gene_disease_reference USING btree (gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id);
Date: 2025-08-26 20:38:52 Duration: 0ms
11 20 753.37 MiB 20.52 MiB 64.70 MiB 37.67 MiB cluster pub2.term_label;-
CLUSTER pub2.TERM_LABEL;
Date: 2025-08-27 03:06:50 Duration: 36s823ms
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CLUSTER pub2.TERM_LABEL;
Date: 2025-08-27 03:06:20 Duration: 0ms
12 20 218.59 MiB 6.66 MiB 16.98 MiB 10.93 MiB vacuum full analyze term;-
vacuum FULL analyze TERM;
Date: 2025-08-26 16:01:56 Duration: 9s854ms
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vacuum FULL analyze TERM;
Date: 2025-08-26 16:01:49 Duration: 0ms
13 15 12.45 GiB 420.05 MiB 1.00 GiB 850.02 MiB create index ix_term_enrich_agent_enr_term on pub2.term_enrichment_agent using btree (enriched_term_id);-
CREATE INDEX ix_term_enrich_agent_enr_term ON pub2.term_enrichment_agent USING btree (enriched_term_id);
Date: 2025-08-26 23:13:16 Duration: 1m51s
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CREATE INDEX ix_term_enrich_agent_enr_term ON pub2.term_enrichment_agent USING btree (enriched_term_id);
Date: 2025-08-26 23:13:16 Duration: 0ms
14 15 7.43 GiB 8.00 KiB 1.00 GiB 507.06 MiB alter table pub2.gene_disease_reference add constraint gene_disease_reference_pk primary key (id);-
ALTER TABLE pub2.gene_disease_reference ADD CONSTRAINT gene_disease_reference_pk PRIMARY KEY (id);
Date: 2025-08-26 20:35:31 Duration: 1m23s
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ALTER TABLE pub2.gene_disease_reference ADD CONSTRAINT gene_disease_reference_pk PRIMARY KEY (id);
Date: 2025-08-26 20:35:30 Duration: 0ms Database: ctdprd51 User: pub2
15 10 7.43 GiB 422.51 MiB 1.00 GiB 760.59 MiB create index ix_gene_disease_ref_chem on pub2.gene_disease_reference using btree (via_chem_id);-
CREATE INDEX ix_gene_disease_ref_chem ON pub2.gene_disease_reference USING btree (via_chem_id);
Date: 2025-08-26 20:42:19 Duration: 1m35s
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CREATE INDEX ix_gene_disease_ref_chem ON pub2.gene_disease_reference USING btree (via_chem_id);
Date: 2025-08-26 20:42:19 Duration: 0ms
16 10 7.43 GiB 422.51 MiB 1.00 GiB 760.59 MiB create index ix_gene_disease_ref_reference on pub2.gene_disease_reference using btree (reference_id);-
CREATE INDEX ix_gene_disease_ref_reference ON pub2.gene_disease_reference USING btree (reference_id);
Date: 2025-08-26 20:45:15 Duration: 1m25s
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CREATE INDEX ix_gene_disease_ref_reference ON pub2.gene_disease_reference USING btree (reference_id);
Date: 2025-08-26 20:45:15 Duration: 0ms
17 10 66.43 MiB 8.00 KiB 13.38 MiB 6.64 MiB alter table pub2.phenotype_term add constraint phenotype_term_pk primary key (phenotype_id, term_id);-
ALTER TABLE pub2.phenotype_term ADD CONSTRAINT phenotype_term_pk PRIMARY KEY (phenotype_id, term_id);
Date: 2025-08-26 23:29:09 Duration: 0ms
18 10 7.43 GiB 448.05 MiB 1.00 GiB 760.59 MiB create index ix_gene_disease_reference_ixn on pub2.gene_disease_reference using btree (ixn_id);-
CREATE INDEX ix_gene_disease_reference_ixn ON pub2.gene_disease_reference USING btree (ixn_id);
Date: 2025-08-26 20:48:40 Duration: 1m26s
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CREATE INDEX ix_gene_disease_reference_ixn ON pub2.gene_disease_reference USING btree (ixn_id);
Date: 2025-08-26 20:48:40 Duration: 0ms
19 10 1.11 GiB 8.00 KiB 235.86 MiB 113.91 MiB alter table pub2.phenotype_term_reference add constraint phenotype_term_reference_pk primary key (id);-
ALTER TABLE pub2.phenotype_term_reference ADD CONSTRAINT phenotype_term_reference_pk PRIMARY KEY (id);
Date: 2025-08-26 20:53:00 Duration: 12s223ms
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ALTER TABLE pub2.phenotype_term_reference ADD CONSTRAINT phenotype_term_reference_pk PRIMARY KEY (id);
Date: 2025-08-26 20:52:58 Duration: 0ms
20 10 7.43 GiB 422.66 MiB 1.00 GiB 760.59 MiB create index ix_gene_disease_ref_net_sc on pub2.gene_disease_reference using btree (network_score);-
CREATE INDEX ix_gene_disease_ref_net_sc ON pub2.gene_disease_reference USING btree (network_score);
Date: 2025-08-26 20:52:47 Duration: 2m36s
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CREATE INDEX ix_gene_disease_ref_net_sc ON pub2.gene_disease_reference USING btree (network_score);
Date: 2025-08-26 20:52:47 Duration: 0ms
21 10 656.62 MiB 8.00 KiB 132.51 MiB 65.66 MiB alter table pub2.gene_disease add constraint gene_disease_pk primary key (gene_id, disease_id);-
ALTER TABLE pub2.gene_disease ADD CONSTRAINT gene_disease_pk PRIMARY KEY (gene_id, disease_id);
Date: 2025-08-26 23:28:40 Duration: 5s796ms
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ALTER TABLE pub2.gene_disease ADD CONSTRAINT gene_disease_pk PRIMARY KEY (gene_id, disease_id);
Date: 2025-08-26 23:28:40 Duration: 0ms Database: ctdprd51 User: pub2
22 10 7.43 GiB 422.51 MiB 1.00 GiB 760.59 MiB create index ix_gene_disease_ref_dis_gene on pub2.gene_disease_reference using btree (disease_id, gene_id);-
CREATE INDEX ix_gene_disease_ref_dis_gene ON pub2.gene_disease_reference USING btree (disease_id, gene_id);
Date: 2025-08-26 20:47:13 Duration: 1m57s
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CREATE INDEX ix_gene_disease_ref_dis_gene ON pub2.gene_disease_reference USING btree (disease_id, gene_id);
Date: 2025-08-26 20:47:13 Duration: 0ms
23 10 464.38 MiB 8.00 KiB 94.95 MiB 46.44 MiB create unique index chem_disease_reference_ak1 on pub2.chem_disease_reference using btree (chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id);-
CREATE UNIQUE INDEX chem_disease_reference_ak1 ON pub2.chem_disease_reference USING btree (chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id);
Date: 2025-08-26 20:55:03 Duration: 6s247ms
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CREATE UNIQUE INDEX chem_disease_reference_ak1 ON pub2.chem_disease_reference USING btree (chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id);
Date: 2025-08-26 20:55:03 Duration: 0ms
24 10 164.82 MiB 8.00 KiB 37.12 MiB 16.48 MiB alter table pub2.term_enrichment add constraint term_enrichment_pk primary key (term_id, enriched_term_id);-
ALTER TABLE pub2.term_enrichment ADD CONSTRAINT term_enrichment_pk PRIMARY KEY (term_id, enriched_term_id);
Date: 2025-08-26 22:53:40 Duration: 0ms Database: ctdprd51 User: pub2
25 10 7.43 GiB 420.61 MiB 1.00 GiB 760.59 MiB create index ix_gene_disease_ref_src_db on pub2.gene_disease_reference using btree (source_acc_db_id);-
CREATE INDEX ix_gene_disease_ref_src_db ON pub2.gene_disease_reference USING btree (source_acc_db_id);
Date: 2025-08-26 20:39:43 Duration: 50s596ms
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CREATE INDEX ix_gene_disease_ref_src_db ON pub2.gene_disease_reference USING btree (source_acc_db_id);
Date: 2025-08-26 20:39:43 Duration: 0ms
26 10 7.43 GiB 435.43 MiB 1.00 GiB 760.59 MiB create index ix_gene_disease_ref_mod_tm on pub2.gene_disease_reference using btree (mod_tm);-
CREATE INDEX ix_gene_disease_ref_mod_tm ON pub2.gene_disease_reference USING btree (mod_tm);
Date: 2025-08-26 20:50:11 Duration: 1m30s
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CREATE INDEX ix_gene_disease_ref_mod_tm ON pub2.gene_disease_reference USING btree (mod_tm);
Date: 2025-08-26 20:50:10 Duration: 0ms
27 10 254.85 MiB 8.00 KiB 60.67 MiB 25.49 MiB alter table pub2.chem_disease_reference add constraint chem_disease_reference_pk primary key (id);-
ALTER TABLE pub2.chem_disease_reference ADD CONSTRAINT chem_disease_reference_pk PRIMARY KEY (id);
Date: 2025-08-26 20:55:29 Duration: 0ms
28 10 7.43 GiB 437.14 MiB 1.00 GiB 760.59 MiB create index ix_gene_disease_ref_disease on pub2.gene_disease_reference using btree (disease_id);-
CREATE INDEX ix_gene_disease_ref_disease ON pub2.gene_disease_reference USING btree (disease_id);
Date: 2025-08-26 20:43:50 Duration: 1m30s
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CREATE INDEX ix_gene_disease_ref_disease ON pub2.gene_disease_reference USING btree (disease_id);
Date: 2025-08-26 20:43:50 Duration: 0ms
29 10 7.43 GiB 276.49 MiB 1.00 GiB 760.59 MiB create index ix_gene_disease_ref_source_cd on pub2.gene_disease_reference using btree (source_cd);-
CREATE INDEX ix_gene_disease_ref_source_cd ON pub2.gene_disease_reference USING btree (source_cd);
Date: 2025-08-26 20:40:44 Duration: 1m1s
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CREATE INDEX ix_gene_disease_ref_source_cd ON pub2.gene_disease_reference USING btree (source_cd);
Date: 2025-08-26 20:40:44 Duration: 0ms
30 9 8.54 GiB 553.61 MiB 1.00 GiB 971.73 MiB select pub2.maint_cached_value_refresh_data_metrics ();-
select pub2.maint_cached_value_refresh_data_metrics ();
Date: 2025-08-27 06:48:13 Duration: 32m56s
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select pub2.maint_cached_value_refresh_data_metrics ();
Date: 2025-08-27 06:43:44 Duration: 0ms
31 8 66.49 MiB 8.00 KiB 18.15 MiB 8.31 MiB alter table pub2.chem_disease add constraint chem_disease_pk primary key (chem_id, disease_id);-
ALTER TABLE pub2.chem_disease ADD CONSTRAINT chem_disease_pk PRIMARY KEY (chem_id, disease_id);
Date: 2025-08-26 23:29:15 Duration: 0ms
32 6 5.92 GiB 940.61 MiB 1.00 GiB 1010.10 MiB select distinct ptr.phenotype_id, cdr.disease_id, ( select id from pub2.object_type where cd = ?), cdr.reference_id, ptr.reference_id, cdr.ixn_id, cdr.chem_id, ( select id from pub2.object_type where cd = ?), cdr.mod_tm from pub2.chem_disease_reference cdr, pub2.phenotype_term_reference ptr where cdr.chem_id = ptr.term_id;-
SELECT DISTINCT ptr.phenotype_id, cdr.disease_id, ( select id from pub2.OBJECT_TYPE where cd = 'disease'), cdr.reference_id, ptr.reference_id, cdr.ixn_id, cdr.chem_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), cdr.mod_tm FROM pub2.CHEM_DISEASE_REFERENCE cdr, pub2.PHENOTYPE_TERM_REFERENCE ptr WHERE cdr.chem_id = ptr.term_id;
Date: 2025-08-26 20:24:32 Duration: 0ms
33 5 254.81 MiB 50.21 MiB 51.39 MiB 50.96 MiB create index ix_chem_disease_ref_mod_tm on pub2.chem_disease_reference using btree (mod_tm);-
CREATE INDEX ix_chem_disease_ref_mod_tm ON pub2.chem_disease_reference USING btree (mod_tm);
Date: 2025-08-26 20:55:22 Duration: 0ms
34 5 1.11 GiB 212.09 MiB 245.02 MiB 227.80 MiB create index ix_phenotype_term_ref_taxon_id on pub2.phenotype_term_reference using btree (taxon_id);-
CREATE INDEX ix_phenotype_term_ref_taxon_id ON pub2.phenotype_term_reference USING btree (taxon_id);
Date: 2025-08-26 20:53:49 Duration: 8s22ms
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CREATE INDEX ix_phenotype_term_ref_taxon_id ON pub2.phenotype_term_reference USING btree (taxon_id);
Date: 2025-08-26 20:53:49 Duration: 0ms
35 5 1.11 GiB 215.73 MiB 237.15 MiB 227.80 MiB create index ix_phenotype_term_ref_phenotype_id on pub2.phenotype_term_reference using btree (phenotype_id);-
CREATE INDEX ix_phenotype_term_ref_phenotype_id ON pub2.phenotype_term_reference USING btree (phenotype_id);
Date: 2025-08-26 20:53:10 Duration: 9s972ms
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CREATE INDEX ix_phenotype_term_ref_phenotype_id ON pub2.phenotype_term_reference USING btree (phenotype_id);
Date: 2025-08-26 20:53:10 Duration: 0ms
36 5 656.58 MiB 127.69 MiB 135.74 MiB 131.32 MiB create index ix_gene_disease_disease on pub2.gene_disease using btree (disease_id);-
CREATE INDEX ix_gene_disease_disease ON pub2.gene_disease USING btree (disease_id);
Date: 2025-08-26 23:28:47 Duration: 6s646ms
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CREATE INDEX ix_gene_disease_disease ON pub2.gene_disease USING btree (disease_id);
Date: 2025-08-26 23:28:46 Duration: 0ms
37 5 254.82 MiB 50.42 MiB 51.46 MiB 50.96 MiB create index ix_chem_disease_reference_ref on pub2.chem_disease_reference using btree (reference_id);-
CREATE INDEX ix_chem_disease_reference_ref ON pub2.chem_disease_reference USING btree (reference_id);
Date: 2025-08-26 20:55:10 Duration: 0ms
38 5 1.11 GiB 223.52 MiB 240.66 MiB 227.80 MiB create index ix_phenotype_term_ref_via_term_id on pub2.phenotype_term_reference using btree (via_term_id);-
CREATE INDEX ix_phenotype_term_ref_via_term_id ON pub2.phenotype_term_reference USING btree (via_term_id);
Date: 2025-08-26 20:54:41 Duration: 11s773ms
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CREATE INDEX ix_phenotype_term_ref_via_term_id ON pub2.phenotype_term_reference USING btree (via_term_id);
Date: 2025-08-26 20:54:41 Duration: 0ms
39 5 66.39 MiB 12.52 MiB 13.69 MiB 13.28 MiB create index ix_phenotype_term_term_id on pub2.phenotype_term using btree (term_id);-
CREATE INDEX ix_phenotype_term_term_id ON pub2.phenotype_term USING btree (term_id);
Date: 2025-08-26 23:29:10 Duration: 0ms
40 5 230.04 MiB 42.45 MiB 48.58 MiB 46.01 MiB create index ix_term_enrich_corr_p_val on pub2.term_enrichment using btree (corrected_p_val);-
CREATE INDEX ix_term_enrich_corr_p_val ON pub2.term_enrichment USING btree (corrected_p_val);
Date: 2025-08-26 22:53:49 Duration: 0ms
41 5 254.81 MiB 50.13 MiB 51.41 MiB 50.96 MiB create index ix_chem_disease_reference_gene on pub2.chem_disease_reference using btree (via_gene_id);-
CREATE INDEX ix_chem_disease_reference_gene ON pub2.chem_disease_reference USING btree (via_gene_id);
Date: 2025-08-26 20:55:16 Duration: 0ms
42 5 1.11 GiB 216.26 MiB 242.95 MiB 227.80 MiB create index ix_phenotype_term_reference_source_acc_db_id on pub2.phenotype_term_reference using btree (source_acc_db_id);-
CREATE INDEX ix_phenotype_term_reference_source_acc_db_id ON pub2.phenotype_term_reference USING btree (source_acc_db_id);
Date: 2025-08-26 20:54:06 Duration: 8s369ms
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CREATE INDEX ix_phenotype_term_reference_source_acc_db_id ON pub2.phenotype_term_reference USING btree (source_acc_db_id);
Date: 2025-08-26 20:54:06 Duration: 0ms
43 5 254.82 MiB 50.50 MiB 51.63 MiB 50.96 MiB create index ix_chem_disease_reference_dis on pub2.chem_disease_reference using btree (disease_id);-
CREATE INDEX ix_chem_disease_reference_dis ON pub2.chem_disease_reference USING btree (disease_id);
Date: 2025-08-26 20:55:06 Duration: 0ms
44 5 164.78 MiB 27.88 MiB 37.45 MiB 32.96 MiB create index ix_term_enrich_obj_type on pub2.term_enrichment using btree (object_type_id);-
CREATE INDEX ix_term_enrich_obj_type ON pub2.term_enrichment USING btree (object_type_id);
Date: 2025-08-26 22:53:41 Duration: 0ms
45 5 688.00 KiB 120.00 KiB 160.00 KiB 137.60 KiB create index ix_gene_disease_cur_ref_qty on pub2.gene_disease using btree (curated_reference_qty) where (curated_reference_qty > ?);-
CREATE INDEX ix_gene_disease_cur_ref_qty ON pub2.gene_disease USING btree (curated_reference_qty) WHERE (curated_reference_qty > 0);
Date: 2025-08-26 23:29:01 Duration: 0ms
46 5 1.11 GiB 224.53 MiB 232.12 MiB 227.80 MiB create index ix_phenotype_term_ref_term_id on pub2.phenotype_term_reference using btree (term_id);-
CREATE INDEX ix_phenotype_term_ref_term_id ON pub2.phenotype_term_reference USING btree (term_id);
Date: 2025-08-26 20:53:20 Duration: 10s676ms
-
CREATE INDEX ix_phenotype_term_ref_term_id ON pub2.phenotype_term_reference USING btree (term_id);
Date: 2025-08-26 20:53:20 Duration: 0ms
47 5 1.11 GiB 201.58 MiB 241.29 MiB 227.80 MiB create index ix_phenotype_term_ref_evidence_cd on pub2.phenotype_term_reference using btree (evidence_cd);-
CREATE INDEX ix_phenotype_term_ref_evidence_cd ON pub2.phenotype_term_reference USING btree (evidence_cd);
Date: 2025-08-26 20:53:57 Duration: 7s932ms
-
CREATE INDEX ix_phenotype_term_ref_evidence_cd ON pub2.phenotype_term_reference USING btree (evidence_cd);
Date: 2025-08-26 20:53:57 Duration: 0ms
48 5 66.39 MiB 12.69 MiB 13.70 MiB 13.28 MiB create index ix_phenotype_term_phenotype_id on pub2.phenotype_term using btree (phenotype_id);-
CREATE INDEX ix_phenotype_term_phenotype_id ON pub2.phenotype_term USING btree (phenotype_id);
Date: 2025-08-26 23:29:10 Duration: 0ms
49 5 254.82 MiB 47.67 MiB 53.61 MiB 50.96 MiB create index ix_chem_disease_ref_source_cd on pub2.chem_disease_reference using btree (source_cd);-
CREATE INDEX ix_chem_disease_ref_source_cd ON pub2.chem_disease_reference USING btree (source_cd);
Date: 2025-08-26 20:55:11 Duration: 0ms
50 5 656.44 MiB 126.66 MiB 140.04 MiB 131.29 MiB create index ix_gene_disease_ind_chem_qty on pub2.gene_disease using btree (indirect_chem_qty) where (indirect_chem_qty > ?);-
CREATE INDEX ix_gene_disease_ind_chem_qty ON pub2.gene_disease USING btree (indirect_chem_qty) WHERE (indirect_chem_qty > 0);
Date: 2025-08-26 23:29:08 Duration: 6s661ms
-
CREATE INDEX ix_gene_disease_ind_chem_qty ON pub2.gene_disease USING btree (indirect_chem_qty) WHERE (indirect_chem_qty > 0);
Date: 2025-08-26 23:29:08 Duration: 0ms
51 5 1.11 GiB 213.32 MiB 248.07 MiB 227.80 MiB create index ix_phenotype_term_ref_object_type_id on pub2.phenotype_term_reference using btree (term_object_type_id);-
CREATE INDEX ix_phenotype_term_ref_object_type_id ON pub2.phenotype_term_reference USING btree (term_object_type_id);
Date: 2025-08-26 20:53:30 Duration: 9s280ms
-
CREATE INDEX ix_phenotype_term_ref_object_type_id ON pub2.phenotype_term_reference USING btree (term_object_type_id);
Date: 2025-08-26 20:53:29 Duration: 0ms
52 5 164.79 MiB 29.45 MiB 37.12 MiB 32.96 MiB create index ix_term_enrich_enr_obj_type on pub2.term_enrichment using btree (enriched_object_type_id);-
CREATE INDEX ix_term_enrich_enr_obj_type ON pub2.term_enrichment USING btree (enriched_object_type_id);
Date: 2025-08-26 22:53:44 Duration: 0ms
53 5 1.56 GiB 317.71 MiB 324.93 MiB 319.69 MiB create index ix_phenotype_term_ref_ids on pub2.phenotype_term_reference using btree (phenotype_id, term_id, via_term_object_type_id, term_object_type_id);-
CREATE INDEX ix_phenotype_term_ref_ids ON pub2.phenotype_term_reference USING btree (phenotype_id, term_id, via_term_object_type_id, term_object_type_id);
Date: 2025-08-26 20:54:57 Duration: 15s663ms
-
CREATE INDEX ix_phenotype_term_ref_ids ON pub2.phenotype_term_reference USING btree (phenotype_id, term_id, via_term_object_type_id, term_object_type_id);
Date: 2025-08-26 20:54:57 Duration: 0ms
54 5 254.82 MiB 48.67 MiB 53.02 MiB 50.96 MiB create index ix_chem_disease_ref_net_sc on pub2.chem_disease_reference using btree (network_score);-
CREATE INDEX ix_chem_disease_ref_net_sc ON pub2.chem_disease_reference USING btree (network_score);
Date: 2025-08-26 20:55:27 Duration: 5s340ms
-
CREATE INDEX ix_chem_disease_ref_net_sc ON pub2.chem_disease_reference USING btree (network_score);
Date: 2025-08-26 20:55:27 Duration: 0ms
55 5 254.81 MiB 50.30 MiB 51.62 MiB 50.96 MiB create index ix_chem_disease_ref_src_db on pub2.chem_disease_reference using btree (source_acc_db_id);-
CREATE INDEX ix_chem_disease_ref_src_db ON pub2.chem_disease_reference USING btree (source_acc_db_id);
Date: 2025-08-26 20:55:13 Duration: 0ms
56 5 230.03 MiB 43.98 MiB 49.05 MiB 46.01 MiB create index ix_term_enrich_raw_p_val on pub2.term_enrichment using btree (raw_p_val);-
CREATE INDEX ix_term_enrich_raw_p_val ON pub2.term_enrichment USING btree (raw_p_val);
Date: 2025-08-26 22:53:55 Duration: 5s582ms
-
CREATE INDEX ix_term_enrich_raw_p_val ON pub2.term_enrichment USING btree (raw_p_val);
Date: 2025-08-26 22:53:55 Duration: 0ms
57 5 254.81 MiB 49.41 MiB 52.80 MiB 50.96 MiB create index ix_chem_disease_reference_ixn on pub2.chem_disease_reference using btree (ixn_id);-
CREATE INDEX ix_chem_disease_reference_ixn ON pub2.chem_disease_reference USING btree (ixn_id);
Date: 2025-08-26 20:55:19 Duration: 0ms
58 5 1.11 GiB 216.66 MiB 235.00 MiB 227.80 MiB create index ix_phenotype_term_reference_ixn_id on pub2.phenotype_term_reference using btree (ixn_id);-
CREATE INDEX ix_phenotype_term_reference_ixn_id ON pub2.phenotype_term_reference USING btree (ixn_id);
Date: 2025-08-26 20:54:30 Duration: 11s529ms
-
CREATE INDEX ix_phenotype_term_reference_ixn_id ON pub2.phenotype_term_reference USING btree (ixn_id);
Date: 2025-08-26 20:54:30 Duration: 0ms
59 5 1.11 GiB 213.58 MiB 232.34 MiB 227.80 MiB create index ix_phenotype_term_reference_term_reference_id on pub2.phenotype_term_reference using btree (term_reference_id);-
CREATE INDEX ix_phenotype_term_reference_term_reference_id ON pub2.phenotype_term_reference USING btree (term_reference_id);
Date: 2025-08-26 20:54:18 Duration: 12s330ms
-
CREATE INDEX ix_phenotype_term_reference_term_reference_id ON pub2.phenotype_term_reference USING btree (term_reference_id);
Date: 2025-08-26 20:54:18 Duration: 0ms
60 5 40.00 KiB 8.00 KiB 8.00 KiB 8.00 KiB create index ix_gene_disease_exp_ref_qty on pub2.gene_disease using btree (exposure_reference_qty) where (exposure_reference_qty > ?);-
CREATE INDEX ix_gene_disease_exp_ref_qty ON pub2.gene_disease USING btree (exposure_reference_qty) WHERE (exposure_reference_qty > 0);
Date: 2025-08-26 23:29:08 Duration: 0ms
61 5 656.58 MiB 129.62 MiB 132.13 MiB 131.32 MiB create index ix_gene_disease_network_score on pub2.gene_disease using btree (network_score);-
CREATE INDEX ix_gene_disease_network_score ON pub2.gene_disease USING btree (network_score);
Date: 2025-08-26 23:29:00 Duration: 13s852ms
-
CREATE INDEX ix_gene_disease_network_score ON pub2.gene_disease USING btree (network_score);
Date: 2025-08-26 23:29:00 Duration: 0ms
62 5 164.78 MiB 30.91 MiB 36.55 MiB 32.96 MiB create index ix_term_enrich_tgt_match on pub2.term_enrichment using btree (target_match_qty);-
CREATE INDEX ix_term_enrich_tgt_match ON pub2.term_enrichment USING btree (target_match_qty);
Date: 2025-08-26 22:53:43 Duration: 0ms
63 5 1.11 GiB 221.15 MiB 231.10 MiB 227.80 MiB create index ix_phenotype_term_ref_reference_id on pub2.phenotype_term_reference using btree (reference_id);-
CREATE INDEX ix_phenotype_term_ref_reference_id ON pub2.phenotype_term_reference USING btree (reference_id);
Date: 2025-08-26 20:53:41 Duration: 11s847ms
-
CREATE INDEX ix_phenotype_term_ref_reference_id ON pub2.phenotype_term_reference USING btree (reference_id);
Date: 2025-08-26 20:53:41 Duration: 0ms
64 4 66.45 MiB 16.48 MiB 16.78 MiB 16.61 MiB create index ix_chem_disease_network_score on pub2.chem_disease using btree (network_score);-
CREATE INDEX ix_chem_disease_network_score ON pub2.chem_disease USING btree (network_score);
Date: 2025-08-26 23:29:13 Duration: 0ms
65 4 14.48 MiB 8.00 KiB 7.29 MiB 3.62 MiB alter table pub2.phenotype_term_axn add constraint phenotype_term_axn_pk primary key (phenotype_id, term_id, action_type_nm, action_degree_type_nm);-
ALTER TABLE pub2.phenotype_term_axn ADD CONSTRAINT phenotype_term_axn_pk PRIMARY KEY (phenotype_id, term_id, action_type_nm, action_degree_type_nm);
Date: 2025-08-26 23:29:11 Duration: 0ms
66 4 66.46 MiB 15.49 MiB 17.14 MiB 16.62 MiB create index ix_chem_disease_disease on pub2.chem_disease using btree (disease_id);-
CREATE INDEX ix_chem_disease_disease ON pub2.chem_disease USING btree (disease_id);
Date: 2025-08-26 23:29:14 Duration: 0ms
67 4 32.00 KiB 8.00 KiB 8.00 KiB 8.00 KiB create index ix_chem_disease_exp_ref_qty on pub2.chem_disease using btree (exposure_reference_qty) where (exposure_reference_qty > ?);-
CREATE INDEX ix_chem_disease_exp_ref_qty ON pub2.chem_disease USING btree (exposure_reference_qty) WHERE (exposure_reference_qty > 0);
Date: 2025-08-26 23:29:15 Duration: 0ms
68 4 2.01 MiB 504.00 KiB 520.00 KiB 514.00 KiB create index ix_chem_disease_cur_ref_qty on pub2.chem_disease using btree (curated_reference_qty) where (curated_reference_qty > ?);-
CREATE INDEX ix_chem_disease_cur_ref_qty ON pub2.chem_disease USING btree (curated_reference_qty) WHERE (curated_reference_qty > 0);
Date: 2025-08-26 23:29:14 Duration: 0ms
69 4 65.57 MiB 16.00 MiB 16.77 MiB 16.39 MiB create index ix_chem_disease_ind_gene_qty on pub2.chem_disease using btree (indirect_gene_qty) where (indirect_gene_qty > ?);-
CREATE INDEX ix_chem_disease_ind_gene_qty ON pub2.chem_disease USING btree (indirect_gene_qty) WHERE (indirect_gene_qty > 0);
Date: 2025-08-26 23:29:14 Duration: 0ms
70 2 6.56 MiB 2.16 MiB 4.40 MiB 3.28 MiB create index ix_phenotype_term_axn_phenotype_id on pub2.phenotype_term_axn using btree (phenotype_id);-
CREATE INDEX ix_phenotype_term_axn_phenotype_id ON pub2.phenotype_term_axn USING btree (phenotype_id);
Date: 2025-08-26 23:29:11 Duration: 0ms
71 2 6.56 MiB 3.01 MiB 3.55 MiB 3.28 MiB create index ix_phenotype_term_axn_term_id on pub2.phenotype_term_axn using btree (term_id);-
CREATE INDEX ix_phenotype_term_axn_term_id ON pub2.phenotype_term_axn USING btree (term_id);
Date: 2025-08-26 23:29:11 Duration: 0ms
72 1 27.14 GiB 27.14 GiB 27.14 GiB 27.14 GiB select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = ?);-
select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = 'does not affect');
Date: 2025-08-26 18:42:47 Duration: 0ms
Queries generating the largest temporary files
Rank Size Query 1 27.14 GiB select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = 'does not affect');[ Date: 2025-08-26 18:42:47 ]
2 1.00 GiB SELECT * FROM pgbulkload.pg_bulkload ($1);[ Date: 2025-08-26 15:23:30 - Database: ctdprd51 - User: load - Application: pg_bulkload ]
3 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-08-26 19:29:51 ]
4 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-08-26 19:29:51 ]
5 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-08-26 19:29:51 ]
6 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-08-26 19:29:51 ]
7 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-08-26 19:29:51 ]
8 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-08-26 19:29:51 ]
9 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-08-26 19:29:51 ]
10 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-08-26 19:29:51 ]
11 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-08-26 19:29:51 ]
12 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-08-26 19:29:51 ]
13 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-08-26 19:29:51 ]
14 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-08-26 19:29:51 ]
15 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-08-26 19:29:51 ]
16 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-08-26 19:29:51 ]
17 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-08-26 19:29:51 ]
18 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-08-26 19:29:51 ]
19 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-08-26 19:29:51 ]
20 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-08-26 19:29:52 ]
-
Vacuums
Vacuums / Analyzes Distribution
Key values
- 294.59 sec Highest CPU-cost vacuum
Table pub2.gene_disease
Database ctdprd51 - 2025-08-27 00:14:36 Date
- 0 sec Highest CPU-cost analyze
Table
Database ctdprd51 - Date
Average Autovacuum Duration
Key values
- 294.59 sec Highest CPU-cost vacuum
Table pub2.gene_disease
Database ctdprd51 - 2025-08-27 00:14:36 Date
Analyzes per table
Key values
- pubc.log_query (142) Main table analyzed (database ctdprd51)
- 258 analyzes Total
Table Number of analyzes ctdprd51.pubc.log_query 142 ctdprd51.pub2.term_set_enrichment 7 ctdprd51.pub2.term_set_enrichment_agent 7 ctdprd51.pg_catalog.pg_class 6 ctdprd51.pg_catalog.pg_attribute 4 ctdprd51.pub2.term 4 ctdprd51.pub2.reference 3 ctdprd51.pg_catalog.pg_type 2 ctdprd51.pg_catalog.pg_index 2 ctdprd51.pub2.phenotype_term 2 ctdprd51.pub1.term_set_enrichment 2 ctdprd51.pub2.db 2 ctdprd51.pub2.dag_node 2 ctdprd51.pg_catalog.pg_depend 2 postgres.pg_catalog.pg_shdepend 2 ctdprd51.pub2.gene_gene_ref_throughput 1 ctdprd51.edit.action_degree 1 ctdprd51.pub2.term_comp_agent 1 ctdprd51.pub2.term_comp 1 ctdprd51.edit.geographic_region 1 ctdprd51.edit.action_type_path 1 ctdprd51.edit.evidence 1 ctdprd51.pub2.exposure 1 ctdprd51.edit.object_note 1 ctdprd51.edit.actor_form_type 1 ctdprd51.load.data_load 1 ctdprd51.edit.age_uom 1 ctdprd51.pub2.medium 1 ctdprd51.pub2.term_pathway 1 ctdprd51.pub2.gene_chem_ref_gene_form 1 ctdprd51.pub2.exp_stressor_stressor_src 1 ctdprd51.edit.country 1 ctdprd51.pub2.exp_receptor_tobacco_use 1 ctdprd51.pub2.exp_anatomy 1 ctdprd51.pg_catalog.pg_description 1 ctdprd51.edit.db_report_site 1 ctdprd51.edit.db_link 1 ctdprd51.pub2.gene_go_annot 1 ctdprd51.pub2.list_db_report 1 ctdprd51.pub2.exp_event 1 ctdprd51.pub1.term_set_enrichment_agent 1 ctdprd51.edit.db_report 1 ctdprd51.pg_catalog.pg_constraint 1 ctdprd51.pub2.db_report_site 1 ctdprd51.pub2.reference_exp 1 ctdprd51.pub2.ixn 1 ctdprd51.pub2.term_reference 1 ctdprd51.pub2.db_report 1 ctdprd51.pub2.exp_study_factor 1 ctdprd51.pg_catalog.pg_attrdef 1 ctdprd51.pub2.gene_disease 1 ctdprd51.edit.race 1 ctdprd51.pub2.exp_event_location 1 ctdprd51.pub2.exp_outcome 1 ctdprd51.pub2.exp_receptor_gender 1 ctdprd51.pub2.slim_term_mapping 1 ctdprd51.pub2.exp_receptor_race 1 ctdprd51.pub2.term_label 1 ctdprd51.pub2.action_type 1 ctdprd51.pub2.gene_taxon 1 ctdprd51.edit.list_db_report 1 ctdprd51.pub2.exp_stressor 1 ctdprd51.edit.db 1 ctdprd51.pub2.reference_party_role 1 ctdprd51.load.ixn_prose 1 ctdprd51.pub1.term_comp 1 ctdprd51.pg_catalog.pg_shdepend 1 ctdprd51.pub2.gene_gene 1 ctdprd51.pub2.gene_gene_reference 1 ctdprd51.edit.action_type 1 ctdprd51.pub2.chem_disease 1 ctdprd51.pub2.exp_event_assay_method 1 ctdprd51.pub2.img 1 ctdprd51.pub2.dag_edge 1 ctdprd51.pub2.exp_event_project 1 ctdprd51.edit.reference_db_link 1 ctdprd51.pub2.reference_party 1 ctdprd51.edit.slim_term 1 ctdprd51.pg_catalog.pg_trigger 1 ctdprd51.pub2.db_link 1 ctdprd51.edit.term_label_type 1 ctdprd51.pub2.country 1 ctdprd51.pub2.geographic_region 1 ctdprd51.pub2.exp_receptor 1 Total 258 Vacuums per table
Key values
- pubc.log_query (135) Main table vacuumed on database ctdprd51
- 563 vacuums Total
Index Buffer usage Skipped WAL usage Table Vacuums scans hits misses dirtied pins frozen records full page bytes ctdprd51.pubc.log_query 135 27 65,412 0 2,560 0 97 4,526 1,506 9,209,305 ctdprd51.pub2.phenotype_term 115 2 15,675,136 0 196,742 0 0 798,023 113,804 326,052,386 ctdprd51.pg_toast.pg_toast_9054383 111 1 8,011 0 29 0 0 51 16 38,557 ctdprd51.pub2.ixn 111 1 128,654,741 0 605,487 1 0 1,295,651 375,168 731,602,749 ctdprd51.pub2.gene_disease 8 1 9,988,827 0 1,153,294 0 0 1,660,450 613,692 2,206,095,360 ctdprd51.pub2.term_set_enrichment_agent 5 0 45,483 0 4,701 0 0 22,635 6 1,379,332 ctdprd51.pg_catalog.pg_statistic 4 4 2,784 0 535 0 516 1,802 412 1,755,564 ctdprd51.pub2.term 4 2 1,562,668 0 204,732 0 33 895,990 295,119 1,424,892,471 ctdprd51.pg_catalog.pg_class 3 3 1,071 0 115 0 28 539 113 493,692 ctdprd51.pub2.term_set_enrichment 3 0 1,711 0 134 0 0 710 5 70,691 ctdprd51.pub2.reference 3 2 661,886 0 70,911 0 0 409,478 51,466 225,473,004 ctdprd51.pg_toast.pg_toast_2619 3 3 11,152 0 4,196 0 30,694 9,670 2,013 1,351,609 ctdprd51.pub2.dag_node 2 1 406,962 0 853 0 0 318,868 565 96,072,512 ctdprd51.pg_catalog.pg_attribute 2 2 1,210 0 132 0 78 552 119 631,549 ctdprd51.pub2.exp_event 1 0 13,334 0 4 0 0 6,588 2 402,019 ctdprd51.edit.db_link 1 0 7,601 0 3 0 0 3,682 2 225,957 ctdprd51.pub2.gene_go_annot 1 0 623,077 0 251,784 0 0 311,420 11 18,460,788 ctdprd51.pg_catalog.pg_constraint 1 1 282 0 21 0 0 109 22 101,526 ctdprd51.pub2.exp_anatomy 1 0 127 0 39 0 0 35 2 16,544 ctdprd51.pub2.exp_receptor_tobacco_use 1 0 1,237 0 586 0 0 583 1 42,816 ctdprd51.pub2.gene_chem_ref_gene_form 1 0 34,674 0 3 0 0 17,288 2 1,033,919 ctdprd51.pub2.exp_stressor_stressor_src 1 0 2,879 0 1,414 0 0 1,411 1 91,668 ctdprd51.edit.country 1 0 66 0 1 0 0 8 1 9,627 ctdprd51.pub2.db 1 1 116 0 3 0 0 20 1 11,531 ctdprd51.pg_catalog.pg_description 1 1 202 0 44 0 42 128 23 95,771 ctdprd51.edit.object_note 1 1 175 0 5 0 0 16 3 16,024 ctdprd51.edit.age_uom 1 0 78 0 5 0 0 3 2 14,041 ctdprd51.pub1.term_set_enrichment 1 0 7,906 0 3,650 0 0 3,900 2 241,971 ctdprd51.edit.geographic_region 1 0 64 0 5 0 0 3 2 16,773 ctdprd51.pub2.exposure 1 0 3,955 0 1,927 0 0 1,924 1 121,935 ctdprd51.pg_toast.pg_toast_9054452 1 0 89,433 0 4 0 0 44,709 2 2,654,354 ctdprd51.edit.action_type_path 1 0 51 0 0 0 0 4 1 9,059 ctdprd51.pub2.term_pathway 1 0 3,332 0 3 0 0 1,614 1 103,645 ctdprd51.pub2.term_comp_agent 1 0 143 0 3 0 0 45 1 11,074 ctdprd51.pg_catalog.pg_type 1 1 85 0 40 0 0 55 21 81,182 ctdprd51.pub2.gene_gene_ref_throughput 1 0 15,185 0 2 0 0 1 0 281 ctdprd51.edit.action_degree 1 0 46 0 3 0 0 13 2 15,358 ctdprd51.pg_catalog.pg_index 1 1 177 0 17 0 0 90 12 54,140 ctdprd51.pub2.db_link 1 0 295,120 0 109,351 0 0 147,436 6 8,744,839 ctdprd51.pg_catalog.pg_trigger 1 1 343 0 31 0 0 130 32 142,196 ctdprd51.pub2.exp_receptor 1 0 7,723 0 3,836 0 0 3,833 1 234,566 postgres.pg_catalog.pg_shdepend 1 1 190 0 49 0 0 105 42 125,352 ctdprd51.pg_toast.pg_toast_486223 1 0 52 0 4 0 0 2 1 8,444 ctdprd51.pub2.gene_gene_reference 1 0 31,681 0 2 0 0 1 0 281 ctdprd51.pub2.gene_gene 1 0 12,527 0 4 0 0 1 1 5,097 ctdprd51.pub2.dag_edge 1 0 1,024 0 5 0 0 482 2 39,509 ctdprd51.pub2.img 1 0 1,108 0 5 0 0 524 2 44,871 ctdprd51.edit.reference_db_link 1 0 7,389 0 4 0 0 3,682 2 232,685 ctdprd51.pub2.reference_party 1 0 5,137 0 4 0 0 2,535 2 163,816 ctdprd51.pub2.exp_event_project 1 0 2,280 0 1,121 0 0 1,118 1 74,381 ctdprd51.edit.action_type 1 0 140 0 2 0 0 7 1 9,121 ctdprd51.pub2.exp_event_assay_method 1 0 5,277 0 4 0 0 2,593 2 166,314 ctdprd51.pub2.chem_disease 1 1 274,900 0 48,874 0 0 167,968 48,489 183,386,917 ctdprd51.pub2.exp_outcome 1 0 839 0 366 0 0 362 2 35,689 ctdprd51.pub2.exp_receptor_gender 1 0 2,840 0 1,408 0 0 1,405 1 91,314 ctdprd51.pub2.slim_term_mapping 1 0 606 0 3 0 0 1 1 6,113 ctdprd51.pub2.exp_receptor_race 1 0 1,390 0 663 0 0 660 1 47,359 ctdprd51.pub2.term_label 1 0 190,237 0 6 0 0 95,050 4 5,636,215 ctdprd51.pub2.exp_event_location 1 0 3,696 0 1,799 0 0 1,796 1 114,383 ctdprd51.pub2.reference_party_role 1 0 13,602 0 5 0 0 6,774 2 411,537 ctdprd51.load.ixn_prose 1 0 58,369 0 54,263 0 0 56,292 3 3,345,544 ctdprd51.pub2.gene_taxon 1 0 163,194 0 7 0 0 81,538 4 4,840,371 ctdprd51.pub2.exp_stressor 1 0 6,621 0 3,285 0 0 3,281 2 207,494 ctdprd51.pg_catalog.pg_depend 1 1 639 0 81 0 65 293 83 353,092 ctdprd51.pub2.term_reference 1 0 39,069 0 5 0 0 19,480 2 1,161,191 ctdprd51.pub2.reference_exp 1 0 336 0 4 0 0 131 2 21,980 ctdprd51.pg_catalog.pg_attrdef 1 1 85 0 4 0 0 23 3 12,758 ctdprd51.pub2.exp_study_factor 1 0 114 0 14 0 0 11 1 9,068 Total 563 60 159,017,807 238,647 2,729,196 1 31,553 6,410,108 1,502,818 5,258,623,281 Tuples removed per table
Key values
- pub2.gene_disease (34355424) Main table with removed tuples on database ctdprd51
- 64868560 tuples Total removed
Index Tuples Pages Table Vacuums scans removed remain not yet removable removed remain ctdprd51.pub2.gene_disease 8 1 34,355,424 515,331,360 240,487,968 0 4,041,816 ctdprd51.pub2.phenotype_term 115 2 20,856,827 791,813,448 392,433,858 0 7,595,120 ctdprd51.pub2.chem_disease 1 1 3,476,631 3,476,631 0 0 51,078 ctdprd51.pub2.ixn 111 1 2,227,150 545,218,748 274,521,940 0 64,099,947 ctdprd51.pub2.term 4 2 2,129,522 6,415,701 0 0 407,775 ctdprd51.pub2.dag_node 2 1 1,742,999 3,470,966 0 0 125,259 ctdprd51.pub2.reference 3 2 53,114 602,283 0 0 204,615 ctdprd51.pg_toast.pg_toast_2619 3 3 10,808 58,896 0 0 37,776 ctdprd51.pubc.log_query 135 27 6,362 846,565 636,992 0 24,610 ctdprd51.pg_catalog.pg_statistic 4 4 2,236 12,864 43 0 1,640 ctdprd51.pg_catalog.pg_attribute 2 2 1,599 17,481 0 0 460 ctdprd51.pg_catalog.pg_depend 1 1 1,360 14,070 0 0 139 ctdprd51.pg_catalog.pg_description 1 1 1,285 5,325 0 0 90 ctdprd51.pg_catalog.pg_class 3 3 648 5,929 0 0 282 postgres.pg_catalog.pg_shdepend 1 1 626 1,570 0 0 25 ctdprd51.pg_catalog.pg_trigger 1 1 452 1,797 0 0 52 ctdprd51.pg_catalog.pg_index 1 1 285 1,167 0 0 38 ctdprd51.edit.country 1 0 163 249 0 0 4 ctdprd51.pg_catalog.pg_constraint 1 1 162 879 0 0 40 ctdprd51.pub2.db 1 1 134 134 0 0 7 ctdprd51.pg_catalog.pg_type 1 1 133 1,153 0 0 34 ctdprd51.edit.action_degree 1 0 109 219 0 0 6 ctdprd51.edit.action_type_path 1 0 106 106 0 0 2 ctdprd51.pg_catalog.pg_attrdef 1 1 92 234 0 0 12 ctdprd51.pg_toast.pg_toast_9054383 111 1 73 15,911 8,030 0 2,331 ctdprd51.edit.geographic_region 1 0 67 51 0 0 1 ctdprd51.edit.object_note 1 1 66 33 0 1 2 ctdprd51.edit.action_type 1 0 64 60 0 0 3 ctdprd51.edit.age_uom 1 0 63 9 0 0 1 ctdprd51.pub2.exp_event 1 0 0 223,894 0 0 6,587 ctdprd51.edit.db_link 1 0 0 330,331 0 0 3,681 ctdprd51.pub2.gene_go_annot 1 0 0 48,894,240 0 0 311,419 ctdprd51.pub2.exp_anatomy 1 0 0 4,025 0 0 34 ctdprd51.pub2.exp_receptor_tobacco_use 1 0 0 82,439 0 0 582 ctdprd51.pub2.gene_chem_ref_gene_form 1 0 0 3,191,061 0 0 17,287 ctdprd51.pub2.exp_stressor_stressor_src 1 0 0 318,579 0 0 1,410 ctdprd51.pub1.term_set_enrichment 1 0 0 1,223,990 0 0 20,239 ctdprd51.pub2.exposure 1 0 0 233,322 0 0 1,923 ctdprd51.pg_toast.pg_toast_9054452 1 0 0 241,679 0 0 44,708 ctdprd51.pub2.term_pathway 1 0 0 135,792 0 0 1,613 ctdprd51.pub2.term_comp_agent 1 0 0 4,548 0 0 44 ctdprd51.pub2.gene_gene_ref_throughput 1 0 0 1,454,713 0 0 7,569 ctdprd51.pub2.term_set_enrichment 3 0 0 80,719 0 0 1,336 ctdprd51.pub2.db_link 1 0 0 20,357,616 0 0 147,435 ctdprd51.pub2.exp_receptor 1 0 0 206,105 0 0 3,832 ctdprd51.pg_toast.pg_toast_486223 1 0 0 5 0 0 1 ctdprd51.pub2.gene_gene_reference 1 0 0 1,447,140 0 0 15,778 ctdprd51.pub2.gene_gene 1 0 0 1,154,154 0 0 6,239 ctdprd51.pub2.dag_edge 1 0 0 88,931 0 0 481 ctdprd51.pub2.img 1 0 0 50,671 0 0 523 ctdprd51.edit.reference_db_link 1 0 0 330,331 0 0 3,681 ctdprd51.pub2.reference_party 1 0 0 453,652 0 0 2,534 ctdprd51.pub2.exp_event_project 1 0 0 106,629 0 0 1,117 ctdprd51.pub2.exp_event_assay_method 1 0 0 258,619 0 0 2,592 ctdprd51.pub2.exp_outcome 1 0 0 36,349 0 0 361 ctdprd51.pub2.exp_receptor_gender 1 0 0 201,624 0 0 1,404 ctdprd51.pub2.slim_term_mapping 1 0 0 33,507 0 0 264 ctdprd51.pub2.exp_receptor_race 1 0 0 101,622 0 0 659 ctdprd51.pub2.term_label 1 0 0 6,546,266 0 0 95,049 ctdprd51.pub2.term_set_enrichment_agent 5 0 0 5,503,581 0 0 62,545 ctdprd51.pub2.exp_event_location 1 0 0 269,944 0 0 1,795 ctdprd51.pub2.reference_party_role 1 0 0 1,252,902 0 0 6,773 ctdprd51.load.ixn_prose 1 0 0 3,097,297 0 0 56,291 ctdprd51.pub2.gene_taxon 1 0 0 12,801,236 0 0 81,537 ctdprd51.pub2.exp_stressor 1 0 0 226,513 0 0 3,280 ctdprd51.pub2.term_reference 1 0 0 3,603,573 0 0 19,479 ctdprd51.pub2.reference_exp 1 0 0 3,586 0 0 130 ctdprd51.pub2.exp_study_factor 1 0 0 1,696 0 0 10 Total 563 60 64,868,560 1,981,866,720 908,088,831 1 77,525,387 Pages removed per table
Key values
- edit.object_note (1) Main table with removed pages on database ctdprd51
- 1 pages Total removed
Table Number of vacuums Index scans Tuples removed Pages removed ctdprd51.edit.object_note 1 1 66 1 ctdprd51.pub2.exp_event 1 0 0 0 ctdprd51.pub2.dag_node 2 1 1742999 0 ctdprd51.edit.db_link 1 0 0 0 ctdprd51.pub2.gene_go_annot 1 0 0 0 ctdprd51.pg_catalog.pg_constraint 1 1 162 0 ctdprd51.pub2.exp_anatomy 1 0 0 0 ctdprd51.pub2.exp_receptor_tobacco_use 1 0 0 0 ctdprd51.pub2.gene_chem_ref_gene_form 1 0 0 0 ctdprd51.pub2.exp_stressor_stressor_src 1 0 0 0 ctdprd51.edit.country 1 0 163 0 ctdprd51.pub2.db 1 1 134 0 ctdprd51.pg_toast.pg_toast_9054383 111 1 73 0 ctdprd51.pg_catalog.pg_description 1 1 1285 0 ctdprd51.edit.age_uom 1 0 63 0 ctdprd51.pub1.term_set_enrichment 1 0 0 0 ctdprd51.edit.geographic_region 1 0 67 0 ctdprd51.pub2.phenotype_term 115 2 20856827 0 ctdprd51.pub2.exposure 1 0 0 0 ctdprd51.pg_toast.pg_toast_9054452 1 0 0 0 ctdprd51.edit.action_type_path 1 0 106 0 ctdprd51.pub2.term_pathway 1 0 0 0 ctdprd51.pub2.term_comp_agent 1 0 0 0 ctdprd51.pg_catalog.pg_statistic 4 4 2236 0 ctdprd51.pg_catalog.pg_class 3 3 648 0 ctdprd51.pg_catalog.pg_type 1 1 133 0 ctdprd51.pub2.gene_gene_ref_throughput 1 0 0 0 ctdprd51.pub2.term_set_enrichment 3 0 0 0 ctdprd51.edit.action_degree 1 0 109 0 ctdprd51.pub2.reference 3 2 53114 0 ctdprd51.pg_catalog.pg_index 1 1 285 0 ctdprd51.pub2.db_link 1 0 0 0 ctdprd51.pubc.log_query 135 27 6362 0 ctdprd51.pg_catalog.pg_trigger 1 1 452 0 ctdprd51.pg_catalog.pg_attribute 2 2 1599 0 ctdprd51.pub2.exp_receptor 1 0 0 0 postgres.pg_catalog.pg_shdepend 1 1 626 0 ctdprd51.pg_toast.pg_toast_486223 1 0 0 0 ctdprd51.pub2.term 4 2 2129522 0 ctdprd51.pub2.gene_gene_reference 1 0 0 0 ctdprd51.pub2.gene_gene 1 0 0 0 ctdprd51.pub2.dag_edge 1 0 0 0 ctdprd51.pub2.img 1 0 0 0 ctdprd51.edit.reference_db_link 1 0 0 0 ctdprd51.pub2.reference_party 1 0 0 0 ctdprd51.pub2.exp_event_project 1 0 0 0 ctdprd51.edit.action_type 1 0 64 0 ctdprd51.pub2.exp_event_assay_method 1 0 0 0 ctdprd51.pub2.chem_disease 1 1 3476631 0 ctdprd51.pub2.exp_outcome 1 0 0 0 ctdprd51.pub2.exp_receptor_gender 1 0 0 0 ctdprd51.pub2.slim_term_mapping 1 0 0 0 ctdprd51.pub2.exp_receptor_race 1 0 0 0 ctdprd51.pub2.term_label 1 0 0 0 ctdprd51.pub2.term_set_enrichment_agent 5 0 0 0 ctdprd51.pub2.exp_event_location 1 0 0 0 ctdprd51.pub2.reference_party_role 1 0 0 0 ctdprd51.load.ixn_prose 1 0 0 0 ctdprd51.pub2.gene_taxon 1 0 0 0 ctdprd51.pub2.exp_stressor 1 0 0 0 ctdprd51.pg_catalog.pg_depend 1 1 1360 0 ctdprd51.pg_toast.pg_toast_2619 3 3 10808 0 ctdprd51.pub2.term_reference 1 0 0 0 ctdprd51.pub2.ixn 111 1 2227150 0 ctdprd51.pub2.reference_exp 1 0 0 0 ctdprd51.pub2.gene_disease 8 1 34355424 0 ctdprd51.pg_catalog.pg_attrdef 1 1 92 0 ctdprd51.pub2.exp_study_factor 1 0 0 0 Total 563 60 64,868,560 1 Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs Aug 24 00 0 2 01 0 2 02 0 0 03 0 0 04 0 0 05 1 3 06 0 1 07 0 1 08 0 1 09 0 1 10 0 1 11 0 1 12 1 0 13 0 1 14 0 1 15 0 1 16 0 0 17 0 1 18 0 0 19 0 1 20 1 0 21 0 0 22 0 1 23 0 0 Aug 25 00 0 2 01 1 2 02 0 3 03 0 2 04 0 2 05 1 2 06 0 1 07 0 1 08 0 1 09 1 2 10 0 1 11 0 1 12 0 0 13 0 1 14 0 0 15 1 0 16 0 1 17 0 3 18 0 0 19 0 0 20 0 0 21 0 1 22 1 0 23 0 0 Aug 26 00 1 1 01 0 1 02 0 2 03 1 2 04 0 1 05 0 3 06 0 1 07 0 1 08 1 1 09 0 1 10 0 1 11 0 0 12 0 1 13 11 12 14 8 19 15 2 1 16 6 13 17 10 8 18 0 0 19 0 1 20 0 1 21 1 2 22 0 2 23 19 23 Aug 27 00 228 7 01 230 3 02 0 2 03 5 7 04 0 2 05 1 2 06 3 4 07 0 1 08 0 0 09 0 1 10 0 1 11 1 0 12 3 5 13 1 3 14 0 0 15 0 0 16 0 1 17 0 0 18 0 0 19 0 1 20 0 1 21 1 0 22 0 1 23 0 0 Aug 28 00 1 0 01 1 2 02 0 1 03 0 2 04 0 1 05 1 2 06 0 1 07 1 3 08 0 0 09 0 2 10 0 1 11 0 0 12 1 1 13 0 0 14 0 0 15 0 1 16 0 0 17 0 1 18 0 0 19 0 0 20 0 1 21 2 2 22 1 0 23 0 1 Aug 29 00 1 1 01 0 2 02 1 3 03 0 2 04 0 2 05 0 3 06 1 0 07 0 1 08 0 1 09 0 1 10 0 1 11 0 0 12 0 1 13 2 2 14 0 2 15 0 0 16 0 1 17 0 0 18 0 0 19 1 1 20 2 2 21 0 0 22 2 8 23 0 0 Aug 30 00 1 1 01 0 1 02 0 2 03 0 1 04 0 1 05 1 2 06 0 2 07 0 0 08 0 1 09 0 1 10 0 0 11 1 1 12 0 0 13 0 1 14 1 0 15 0 0 16 0 1 17 0 0 18 0 1 19 0 0 20 0 0 21 0 1 22 0 0 23 0 0 - 294.59 sec Highest CPU-cost vacuum
-
Locks
Locks by types
Key values
- unknown Main Lock Type
- 0 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query NO DATASET
Queries that waited the most
Rank Wait time Query NO DATASET
-
Queries
Queries by type
Key values
- 678 Total read queries
- 64 Total write queries
Queries by database
Key values
- ctdprd51 Main database
- 430 Requests
- 12h32m4s (unknown)
- Main time consuming database
Queries by user
Key values
- pubeu Main user
- 817 Requests
User Request type Count Duration edit Total 2 18s74ms insert 2 18s74ms editeu Total 12 2m17s select 12 2m17s load Total 56 2h34m28s ddl 3 24m20s select 53 2h10m7s pub1 Total 2 46s28ms select 2 46s28ms pub2 Total 11 30m28s insert 5 29m44s select 6 43s344ms pubeu Total 817 2h41m28s select 817 2h41m28s qaeu Total 52 1h32m39s select 52 1h32m39s unknown Total 696 21h4m55s ddl 69 1h23m3s insert 26 1h25m15s others 36 1h48m4s select 552 15h49m30s update 13 39m1s Duration by user
Key values
- 21h4m55s (unknown) Main time consuming user
User Request type Count Duration edit Total 2 18s74ms insert 2 18s74ms editeu Total 12 2m17s select 12 2m17s load Total 56 2h34m28s ddl 3 24m20s select 53 2h10m7s pub1 Total 2 46s28ms select 2 46s28ms pub2 Total 11 30m28s insert 5 29m44s select 6 43s344ms pubeu Total 817 2h41m28s select 817 2h41m28s qaeu Total 52 1h32m39s select 52 1h32m39s unknown Total 696 21h4m55s ddl 69 1h23m3s insert 26 1h25m15s others 36 1h48m4s select 552 15h49m30s update 13 39m1s Queries by host
Key values
- unknown Main host
- 1,648 Requests
- 1d4h27m21s (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 744 Requests
- 15h35m13s (unknown)
- Main time consuming application
Application Request type Count Duration pgAdmin 4 - CONN:3997196 Total 1 9s37ms insert 1 9s37ms pgAdmin 4 - CONN:672804 Total 1 8m6s ddl 1 8m6s pg_bulkload Total 16 15m15s select 16 15m15s psql Total 4 43s818ms select 4 43s818ms unknown Total 744 15h35m13s ddl 36 42m1s insert 18 59m51s others 24 55m29s select 658 12h23m41s update 8 34m8s Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2025-08-26 11:18:39 Date
Number of cancelled queries (5 minutes period)
NO DATASET
-
Top Queries
Histogram of query times
Key values
- 544 1000-10000ms duration
Slowest individual queries
Rank Duration Query 1 2h9m11s select pub2.maint_term_derive_data ();[ Date: 2025-08-27 06:05:18 - Bind query: yes ]
2 1h49m51s select pub2.maint_gene_chem_ref_gene_form_refresh ();[ Date: 2025-08-27 01:56:14 - Bind query: yes ]
3 1h1m53s SELECT maint_term_derive_nm_fts ();[ Date: 2025-08-27 03:01:06 - Bind query: yes ]
4 50m27s select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.GENE_GO_ANNOT gga, pub2.PHENOTYPE_TERM_REFERENCE ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');[ Date: 2025-08-26 20:20:22 - Bind query: yes ]
5 48m52s VACUUM FULL ANALYZE;[ Date: 2025-08-27 03:55:44 - Bind query: yes ]
6 42m47s select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');[ Date: 2025-08-26 19:29:48 - Bind query: yes ]
7 35m19s SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;[ Date: 2025-08-27 15:00:30 - Database: ctdprd51 - User: qaeu - Bind query: yes ]
8 33m51s SELECT i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) FROM edit.IXN i, edit.REFERENCE_IXN r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in ('bogusName') order by i.id asc;[ Date: 2025-08-26 17:49:39 - Database: ctdprd51 - User: load - Bind query: yes ]
9 32m56s select pub2.maint_cached_value_refresh_data_metrics ();[ Date: 2025-08-27 06:48:13 - Bind query: yes ]
10 26m46s insert into pub2.GENE_GO_ANNOT (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.GENE_GO_ANNOT;[ Date: 2025-08-26 17:07:17 - Bind query: yes ]
11 25m41s update pub2.GENE_DISEASE gd set exposure_reference_qty = ( select count(distinct reference_id) from pub2.GENE_DISEASE_REFERENCE gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub2.REFERENCE r where has_exposures = true));[ Date: 2025-08-27 00:00:49 - Bind query: yes ]
12 14m33s insert into pub2.DB_LINK (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary) select object_id, object_type_id, acc_txt, db_id, type_cd, is_primary from edit.DB_LINK;[ Date: 2025-08-26 16:35:03 - Database: ctdprd51 - User: pub2 - Bind query: yes ]
13 14m17s ALTER TABLE pub2.term_enrichment_agent ADD CONSTRAINT term_enr_agent_term_enr_fk FOREIGN KEY (term_id, enriched_term_id) REFERENCES term_enrichment (term_id, enriched_term_id);[ Date: 2025-08-26 23:08:13 - Bind query: yes ]
14 11m42s SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0006955' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5))) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;[ Date: 2025-08-24 10:32:18 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
15 11m33s SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0006955' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5))) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;[ Date: 2025-08-24 10:33:39 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
16 10m7s select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = 'does not affect');[ Date: 2025-08-26 18:02:38 - Database: ctdprd51 - User: load - Bind query: yes ]
17 9m33s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2025-08-27 00:09:35 ]
18 9m28s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2025-08-29 00:09:30 ]
19 9m12s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2025-08-28 00:09:14 ]
20 9m6s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2025-08-30 00:09:08 ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 2h9m11s 1 2h9m11s 2h9m11s 2h9m11s select pub2.maint_term_derive_data ();Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Aug 27 06 1 2h9m11s 2h9m11s -
select pub2.maint_term_derive_data ();
Date: 2025-08-27 06:05:18 Duration: 2h9m11s Bind query: yes
2 1h49m51s 1 1h49m51s 1h49m51s 1h49m51s select pub2.maint_gene_chem_ref_gene_form_refresh ();Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Aug 27 01 1 1h49m51s 1h49m51s -
select pub2.maint_gene_chem_ref_gene_form_refresh ();
Date: 2025-08-27 01:56:14 Duration: 1h49m51s Bind query: yes
3 1h4m21s 7 8m59s 9m33s 9m11s select maint_query_logs_archive ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Aug 24 00 1 8m59s 8m59s Aug 25 00 1 8m59s 8m59s Aug 26 00 1 9m 9m Aug 27 00 1 9m33s 9m33s Aug 28 00 1 9m12s 9m12s Aug 29 00 1 9m28s 9m28s Aug 30 00 1 9m6s 9m6s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-08-27 00:09:35 Duration: 9m33s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-08-29 00:09:30 Duration: 9m28s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-08-28 00:09:14 Duration: 9m12s
4 1h1m53s 1 1h1m53s 1h1m53s 1h1m53s select maint_term_derive_nm_fts ();Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Aug 27 03 1 1h1m53s 1h1m53s -
SELECT maint_term_derive_nm_fts ();
Date: 2025-08-27 03:01:06 Duration: 1h1m53s Bind query: yes
5 54m1s 60 5s483ms 7m18s 54s33ms select * from pgbulkload.pg_bulkload (?);Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Aug 26 14 14 6m45s 28s954ms 15 24 22m17s 55s736ms 17 3 1m6s 22s316ms 20 4 8m47s 2m11s 21 3 6m59s 2m19s 22 11 7m44s 42s191ms 23 1 20s815ms 20s815ms [ User: load - Total duration: 15m15s - Times executed: 16 ]
[ Application: pg_bulkload - Total duration: 15m15s - Times executed: 16 ]
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.GENE_DISEASE_REFERENCE,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.log,parse-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.DUPE}');
Date: 2025-08-26 20:32:46 Duration: 7m18s Database: ctdprd51 User: load Application: pg_bulkload Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.DAG_PATH,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.log,parse-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.DUPE}');
Date: 2025-08-26 21:04:39 Duration: 5m16s Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=edit.DB_LINK,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.log,parse-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.DUPE}');
Date: 2025-08-26 14:58:44 Duration: 4m22s Bind query: yes
6 50m27s 1 50m27s 50m27s 50m27s select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.gene_go_annot gga, pub2.phenotype_term_reference ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Aug 26 20 1 50m27s 50m27s -
select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.GENE_GO_ANNOT gga, pub2.PHENOTYPE_TERM_REFERENCE ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');
Date: 2025-08-26 20:20:22 Duration: 50m27s Bind query: yes
7 48m52s 1 0ms 48m52s 48m52s vacuum full analyze;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Aug 27 03 1 48m52s 48m52s -
VACUUM FULL ANALYZE;
Date: 2025-08-27 03:55:44 Duration: 48m52s Bind query: yes
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VACUUM FULL ANALYZE;
Date: 2025-08-27 03:06:53 Duration: 0ms
8 42m47s 1 42m47s 42m47s 42m47s select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.object_type where cd = ?), ptr.term_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.phenotype_term_reference ptr, pub2.phenotype_term_reference ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Aug 26 19 1 42m47s 42m47s -
select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');
Date: 2025-08-26 19:29:48 Duration: 42m47s Bind query: yes
9 35m55s 8 5s12ms 35m19s 4m29s select g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(r.acc_txt, ? order by r.acc_txt) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id group by g.nm, g.acc_txt, d.nm, d.acc_db_cd || ? || d.acc_txt, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by g.nm, d.nm;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Aug 27 15 8 35m55s 4m29s [ User: qaeu - Total duration: 35m19s - Times executed: 1 ]
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2025-08-27 15:00:30 Duration: 35m19s Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2025-08-27 15:14:12 Duration: 5s559ms Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2025-08-27 15:07:18 Duration: 5s308ms Bind query: yes
10 33m51s 1 33m51s 33m51s 33m51s select i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) from edit.ixn i, edit.reference_ixn r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in (...) order by i.id asc;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Aug 26 17 1 33m51s 33m51s [ User: load - Total duration: 33m51s - Times executed: 1 ]
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SELECT i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) FROM edit.IXN i, edit.REFERENCE_IXN r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in ('bogusName') order by i.id asc;
Date: 2025-08-26 17:49:39 Duration: 33m51s Database: ctdprd51 User: load Bind query: yes
11 32m56s 1 32m56s 32m56s 32m56s select pub2.maint_cached_value_refresh_data_metrics ();Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Aug 27 06 1 32m56s 32m56s -
select pub2.maint_cached_value_refresh_data_metrics ();
Date: 2025-08-27 06:48:13 Duration: 32m56s Bind query: yes
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select pub2.maint_cached_value_refresh_data_metrics ();
Date: 2025-08-27 06:43:44 Duration: 0ms
12 26m46s 1 26m46s 26m46s 26m46s insert into pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.gene_go_annot;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Aug 26 17 1 26m46s 26m46s -
insert into pub2.GENE_GO_ANNOT (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.GENE_GO_ANNOT;
Date: 2025-08-26 17:07:17 Duration: 26m46s Bind query: yes
13 25m41s 1 25m41s 25m41s 25m41s update pub2.gene_disease gd set exposure_reference_qty = ( select count(distinct reference_id) from pub2.gene_disease_reference gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub2.reference r where has_exposures = true));Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Aug 27 00 1 25m41s 25m41s -
update pub2.GENE_DISEASE gd set exposure_reference_qty = ( select count(distinct reference_id) from pub2.GENE_DISEASE_REFERENCE gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub2.REFERENCE r where has_exposures = true));
Date: 2025-08-27 00:00:49 Duration: 25m41s Bind query: yes
14 23m16s 2 11m33s 11m42s 11m38s select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.gene_id = any (array (( select ai.gene_id from dag_path pi inner join gene_go_annot ai on pi.descendant_object_id = ai.go_term_id inner join db_link dbli on dbli.object_id = pi.ancestor_object_id where dbli.acc_txt = ? and dbli.type_cd = ? and dbli.object_type_id = ?))) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by c.nm_sort, g.nm_sort, i.sort_txt limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Aug 24 10 2 23m16s 11m38s [ User: pubeu - Total duration: 23m16s - Times executed: 2 ]
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0006955' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5))) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2025-08-24 10:32:18 Duration: 11m42s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0006955' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5))) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2025-08-24 10:33:39 Duration: 11m33s Database: ctdprd51 User: pubeu Bind query: yes
15 15m8s 74 5s351ms 22s474ms 12s280ms select ? AS "Input", phenotypeterm.nm AS "PhenotypeName", phenotypeterm.acc_txt AS "PhenotypeID", diseaseterm.nm AS "DiseaseName", diseaseterm.acc_db_cd || ? || diseaseterm.acc_txt "DiseaseID", ( select string_agg(distinct geneterm.nm, ?) from term geneterm, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and ptr.via_term_id = geneterm.id and ptr.via_term_object_type_id = ?) AS "GeneInferenceNetwork", ( select string_agg(distinct chemterm.nm, ?) from term chemterm, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and ptr.via_term_id = chemterm.id and ptr.via_term_object_type_id = ?) AS "ChemInferenceNetwork", ( select string_agg(distinct r.acc_txt, ?) from reference r, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and (r.id = ptr.reference_id or r.id = ptr.term_reference_id)) AS "PubMedIDs" from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where (phenotypeterm.id = ?) and diseaseterm.object_type_id = ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Aug 25 16 16 3m17s 12s351ms 17 20 4m3s 12s169ms Aug 29 13 24 5m11s 12s981ms 14 14 2m36s 11s159ms [ User: pubeu - Total duration: 11m29s - Times executed: 55 ]
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SELECT /* BatchDiseasePhenotypeAssnsDAO */ 'go:0006915' AS "Input", phenotypeTerm.nm as "PhenotypeName", phenotypeTerm.acc_txt as "PhenotypeID", diseaseTerm.nm as "DiseaseName", diseaseTerm.acc_db_cd || ':' || diseaseTerm.acc_txt "DiseaseID", ( SELECT STRING_AGG(distinct geneTerm.nm, '|') from term geneTerm, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and ptr.via_term_id = geneTerm.id and ptr.via_term_object_type_id = 4) AS "GeneInferenceNetwork", ( SELECT STRING_AGG(distinct chemTerm.nm, '|') from term chemTerm, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and ptr.via_term_id = chemTerm.id and ptr.via_term_object_type_id = 2) AS "ChemInferenceNetwork", ( SELECT STRING_AGG(distinct r.acc_txt, '|') from reference r, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and (r.id = ptr.reference_id or r.id = ptr.term_reference_id)) AS "PubMedIDs" FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE (phenotypeTerm.id = 1268254) and diseaseTerm.object_type_id = 3;
Date: 2025-08-29 14:02:25 Duration: 22s474ms Bind query: yes
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SELECT /* BatchDiseasePhenotypeAssnsDAO */ 'go:0006915' AS "Input", phenotypeTerm.nm as "PhenotypeName", phenotypeTerm.acc_txt as "PhenotypeID", diseaseTerm.nm as "DiseaseName", diseaseTerm.acc_db_cd || ':' || diseaseTerm.acc_txt "DiseaseID", ( SELECT STRING_AGG(distinct geneTerm.nm, '|') from term geneTerm, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and ptr.via_term_id = geneTerm.id and ptr.via_term_object_type_id = 4) AS "GeneInferenceNetwork", ( SELECT STRING_AGG(distinct chemTerm.nm, '|') from term chemTerm, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and ptr.via_term_id = chemTerm.id and ptr.via_term_object_type_id = 2) AS "ChemInferenceNetwork", ( SELECT STRING_AGG(distinct r.acc_txt, '|') from reference r, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and (r.id = ptr.reference_id or r.id = ptr.term_reference_id)) AS "PubMedIDs" FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE (phenotypeTerm.id = 1268254) and diseaseTerm.object_type_id = 3;
Date: 2025-08-29 13:39:10 Duration: 21s955ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchDiseasePhenotypeAssnsDAO */ 'go:0006915' AS "Input", phenotypeTerm.nm as "PhenotypeName", phenotypeTerm.acc_txt as "PhenotypeID", diseaseTerm.nm as "DiseaseName", diseaseTerm.acc_db_cd || ':' || diseaseTerm.acc_txt "DiseaseID", ( SELECT STRING_AGG(distinct geneTerm.nm, '|') from term geneTerm, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and ptr.via_term_id = geneTerm.id and ptr.via_term_object_type_id = 4) AS "GeneInferenceNetwork", ( SELECT STRING_AGG(distinct chemTerm.nm, '|') from term chemTerm, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and ptr.via_term_id = chemTerm.id and ptr.via_term_object_type_id = 2) AS "ChemInferenceNetwork", ( SELECT STRING_AGG(distinct r.acc_txt, '|') from reference r, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and (r.id = ptr.reference_id or r.id = ptr.term_reference_id)) AS "PubMedIDs" FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE (phenotypeTerm.id = 1268254) and diseaseTerm.object_type_id = 3;
Date: 2025-08-29 14:25:44 Duration: 21s310ms Database: ctdprd51 User: pubeu Bind query: yes
16 14m33s 1 14m33s 14m33s 14m33s insert into pub2.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary) select object_id, object_type_id, acc_txt, db_id, type_cd, is_primary from edit.db_link;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Aug 26 16 1 14m33s 14m33s [ User: pub2 - Total duration: 14m33s - Times executed: 1 ]
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insert into pub2.DB_LINK (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary) select object_id, object_type_id, acc_txt, db_id, type_cd, is_primary from edit.DB_LINK;
Date: 2025-08-26 16:35:03 Duration: 14m33s Database: ctdprd51 User: pub2 Bind query: yes
17 14m24s 122 5s56ms 7s902ms 7s87ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?)) and ptr.term_object_type_id = ? and ptr.phenotype_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?))) and taxonterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = ? and action_degree_type_nm in (...)) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Aug 24 00 1 6s954ms 6s954ms 01 1 6s992ms 6s992ms 05 6 43s223ms 7s203ms 06 1 7s47ms 7s47ms 07 1 7s154ms 7s154ms 08 1 7s113ms 7s113ms 09 1 7s81ms 7s81ms 10 1 7s36ms 7s36ms 11 1 6s960ms 6s960ms 12 1 7s77ms 7s77ms 14 2 14s221ms 7s110ms 15 1 7s104ms 7s104ms 16 1 7s215ms 7s215ms 17 1 6s987ms 6s987ms 18 1 7s232ms 7s232ms 19 1 7s83ms 7s83ms 20 1 7s133ms 7s133ms 21 1 7s226ms 7s226ms 22 1 7s25ms 7s25ms 23 1 7s187ms 7s187ms Aug 25 00 1 7s44ms 7s44ms 01 1 7s162ms 7s162ms 02 1 7s86ms 7s86ms 03 1 6s964ms 6s964ms 04 1 7s370ms 7s370ms 05 3 21s365ms 7s121ms 06 1 6s998ms 6s998ms 07 1 7s98ms 7s98ms 08 1 7s124ms 7s124ms 09 1 7s70ms 7s70ms 10 1 6s960ms 6s960ms 11 1 6s994ms 6s994ms 12 1 7s224ms 7s224ms 13 1 7s131ms 7s131ms 14 1 6s942ms 6s942ms 15 1 7s33ms 7s33ms 16 1 7s92ms 7s92ms 17 1 6s919ms 6s919ms 18 1 7s93ms 7s93ms 19 1 7s24ms 7s24ms 20 1 7s902ms 7s902ms 21 1 6s906ms 6s906ms 22 1 7s150ms 7s150ms 23 1 6s955ms 6s955ms Aug 26 00 1 7s46ms 7s46ms 01 1 7s242ms 7s242ms 02 1 7s139ms 7s139ms 03 1 7s55ms 7s55ms 04 1 6s967ms 6s967ms 05 3 21s259ms 7s86ms 06 1 7s227ms 7s227ms 07 1 7s81ms 7s81ms 08 1 7s48ms 7s48ms 09 1 6s938ms 6s938ms 10 1 6s931ms 6s931ms 11 1 7s151ms 7s151ms 12 1 7s52ms 7s52ms 13 1 7s138ms 7s138ms 14 1 7s169ms 7s169ms 15 1 7s274ms 7s274ms 16 1 7s111ms 7s111ms 17 1 6s956ms 6s956ms 18 1 7s60ms 7s60ms 19 1 7s480ms 7s480ms 20 1 6s939ms 6s939ms 21 1 7s497ms 7s497ms 22 1 7s49ms 7s49ms 23 1 7s279ms 7s279ms Aug 27 00 1 7s537ms 7s537ms 01 1 7s627ms 7s627ms 02 1 7s240ms 7s240ms 03 1 7s215ms 7s215ms 04 1 6s955ms 6s955ms 05 3 21s386ms 7s128ms 06 1 6s916ms 6s916ms 07 1 6s779ms 6s779ms 08 1 7s89ms 7s89ms 09 1 7s266ms 7s266ms 10 1 7s135ms 7s135ms 11 1 6s858ms 6s858ms 12 1 7s34ms 7s34ms 13 1 6s969ms 6s969ms 14 1 7s148ms 7s148ms 15 1 7s291ms 7s291ms 16 1 7s160ms 7s160ms 17 1 7s283ms 7s283ms 18 1 6s937ms 6s937ms 19 1 6s986ms 6s986ms 20 1 7s197ms 7s197ms 21 1 7s509ms 7s509ms 22 1 6s975ms 6s975ms 23 1 7s54ms 7s54ms Aug 28 00 1 7s465ms 7s465ms 01 1 6s978ms 6s978ms 02 1 6s950ms 6s950ms 03 1 7s3ms 7s3ms 04 1 7s118ms 7s118ms 05 2 13s779ms 6s889ms 06 1 7s119ms 7s119ms 07 1 6s980ms 6s980ms 08 1 6s993ms 6s993ms 09 1 7s48ms 7s48ms 10 1 6s850ms 6s850ms 11 1 6s919ms 6s919ms 12 1 7s38ms 7s38ms 13 1 6s978ms 6s978ms 14 1 6s989ms 6s989ms 15 1 7s31ms 7s31ms Aug 29 00 1 5s56ms 5s56ms [ User: pubeu - Total duration: 1m51s - Times executed: 16 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-25 20:03:09 Duration: 7s902ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-27 01:03:07 Duration: 7s627ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-27 00:03:24 Duration: 7s537ms Database: ctdprd51 User: pubeu Bind query: yes
18 14m23s 122 5s220ms 8s167ms 7s81ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?)) and ptr.term_object_type_id = ? and ptr.phenotype_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and taxonterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = ? and action_degree_type_nm in (...)) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Aug 24 00 1 6s948ms 6s948ms 01 1 7s153ms 7s153ms 05 5 36s65ms 7s213ms 06 1 7s110ms 7s110ms 07 1 6s981ms 6s981ms 08 1 6s998ms 6s998ms 09 1 7s92ms 7s92ms 10 1 7s58ms 7s58ms 11 1 6s971ms 6s971ms 12 1 6s985ms 6s985ms 14 2 14s159ms 7s79ms 15 1 7s28ms 7s28ms 16 1 7s59ms 7s59ms 17 1 7s94ms 7s94ms 18 1 7s98ms 7s98ms 19 1 7s16ms 7s16ms 20 1 7s20ms 7s20ms 21 1 6s983ms 6s983ms 22 1 7s88ms 7s88ms 23 1 7s25ms 7s25ms Aug 25 00 1 7s40ms 7s40ms 01 1 7s139ms 7s139ms 02 1 7s229ms 7s229ms 03 1 6s970ms 6s970ms 04 1 6s996ms 6s996ms 05 3 21s179ms 7s59ms 06 1 7s73ms 7s73ms 07 1 7s207ms 7s207ms 08 1 7s150ms 7s150ms 09 1 7s106ms 7s106ms 10 1 7s63ms 7s63ms 11 1 6s957ms 6s957ms 12 1 6s992ms 6s992ms 13 1 7s73ms 7s73ms 14 1 6s834ms 6s834ms 15 1 7s8ms 7s8ms 16 1 7s171ms 7s171ms 17 1 6s993ms 6s993ms 18 1 7s197ms 7s197ms 19 1 7s20ms 7s20ms 20 1 7s371ms 7s371ms 21 1 7s57ms 7s57ms 22 1 7s208ms 7s208ms 23 1 6s888ms 6s888ms Aug 26 00 1 7s169ms 7s169ms 01 1 7s7ms 7s7ms 02 1 7s24ms 7s24ms 03 2 14s85ms 7s42ms 04 1 7s4ms 7s4ms 05 3 20s961ms 6s987ms 06 1 6s960ms 6s960ms 07 1 7s102ms 7s102ms 08 1 7s126ms 7s126ms 09 1 7s63ms 7s63ms 10 1 6s962ms 6s962ms 11 1 6s856ms 6s856ms 12 1 7s76ms 7s76ms 13 1 7s105ms 7s105ms 14 1 7s70ms 7s70ms 15 1 7s87ms 7s87ms 16 1 7s110ms 7s110ms 17 1 6s977ms 6s977ms 18 1 7s190ms 7s190ms 19 1 7s310ms 7s310ms 20 1 7s96ms 7s96ms 21 1 7s989ms 7s989ms 22 1 8s167ms 8s167ms 23 1 7s105ms 7s105ms Aug 27 00 1 7s497ms 7s497ms 01 1 7s57ms 7s57ms 02 1 7s265ms 7s265ms 03 1 7s281ms 7s281ms 04 1 7s351ms 7s351ms 05 3 21s348ms 7s116ms 06 1 7s397ms 7s397ms 07 1 6s873ms 6s873ms 08 1 6s739ms 6s739ms 09 1 7s59ms 7s59ms 10 1 7s747ms 7s747ms 11 1 6s877ms 6s877ms 12 2 12s251ms 6s125ms 13 1 7s4ms 7s4ms 14 1 7s95ms 7s95ms 15 1 7s323ms 7s323ms 16 1 7s141ms 7s141ms 17 1 7s13ms 7s13ms 18 1 7s234ms 7s234ms 19 1 7s85ms 7s85ms 20 1 6s866ms 6s866ms 21 1 7s44ms 7s44ms 22 1 7s156ms 7s156ms 23 1 7s12ms 7s12ms Aug 28 00 1 6s943ms 6s943ms 01 1 7s12ms 7s12ms 02 1 6s911ms 6s911ms 03 1 7s10ms 7s10ms 04 1 6s988ms 6s988ms 05 2 14s199ms 7s99ms 06 1 7s271ms 7s271ms 07 1 6s968ms 6s968ms 08 1 7s468ms 7s468ms 09 1 6s954ms 6s954ms 10 1 6s968ms 6s968ms 11 1 7s174ms 7s174ms 12 1 6s898ms 6s898ms 13 1 6s974ms 6s974ms 14 1 6s939ms 6s939ms 15 1 7s40ms 7s40ms [ User: pubeu - Total duration: 13m14s - Times executed: 112 ]
[ User: qaeu - Total duration: 33s539ms - Times executed: 5 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9606' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-26 22:03:12 Duration: 8s167ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9606' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-26 21:03:00 Duration: 7s989ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9606' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-27 10:02:59 Duration: 7s747ms Database: ctdprd51 User: pubeu Bind query: yes
19 14m17s 1 14m17s 14m17s 14m17s alter table pub2.term_enrichment_agent add constraint term_enr_agent_term_enr_fk foreign key (term_id, enriched_term_id) references term_enrichment (term_id, enriched_term_id);Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Aug 26 23 1 14m17s 14m17s -
ALTER TABLE pub2.term_enrichment_agent ADD CONSTRAINT term_enr_agent_term_enr_fk FOREIGN KEY (term_id, enriched_term_id) REFERENCES term_enrichment (term_id, enriched_term_id);
Date: 2025-08-26 23:08:13 Duration: 14m17s Bind query: yes
20 12m45s 5 38s941ms 10m7s 2m33s select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, to_char(cdr.mod_tm, ?) from pub2.gene_chem_reference gcr, pub2.chem_disease_reference cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = ? and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Aug 26 18 5 12m45s 2m33s [ User: load - Total duration: 10m7s - Times executed: 1 ]
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select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = 'does not affect');
Date: 2025-08-26 18:02:38 Duration: 10m7s Database: ctdprd51 User: load Bind query: yes
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select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = 'does not affect');
Date: 2025-08-26 18:22:34 Duration: 40s38ms Bind query: yes
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select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = 'does not affect');
Date: 2025-08-26 18:33:26 Duration: 39s522ms Bind query: yes
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 122 14m24s 5s56ms 7s902ms 7s87ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?)) and ptr.term_object_type_id = ? and ptr.phenotype_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?))) and taxonterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = ? and action_degree_type_nm in (...)) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Aug 24 00 1 6s954ms 6s954ms 01 1 6s992ms 6s992ms 05 6 43s223ms 7s203ms 06 1 7s47ms 7s47ms 07 1 7s154ms 7s154ms 08 1 7s113ms 7s113ms 09 1 7s81ms 7s81ms 10 1 7s36ms 7s36ms 11 1 6s960ms 6s960ms 12 1 7s77ms 7s77ms 14 2 14s221ms 7s110ms 15 1 7s104ms 7s104ms 16 1 7s215ms 7s215ms 17 1 6s987ms 6s987ms 18 1 7s232ms 7s232ms 19 1 7s83ms 7s83ms 20 1 7s133ms 7s133ms 21 1 7s226ms 7s226ms 22 1 7s25ms 7s25ms 23 1 7s187ms 7s187ms Aug 25 00 1 7s44ms 7s44ms 01 1 7s162ms 7s162ms 02 1 7s86ms 7s86ms 03 1 6s964ms 6s964ms 04 1 7s370ms 7s370ms 05 3 21s365ms 7s121ms 06 1 6s998ms 6s998ms 07 1 7s98ms 7s98ms 08 1 7s124ms 7s124ms 09 1 7s70ms 7s70ms 10 1 6s960ms 6s960ms 11 1 6s994ms 6s994ms 12 1 7s224ms 7s224ms 13 1 7s131ms 7s131ms 14 1 6s942ms 6s942ms 15 1 7s33ms 7s33ms 16 1 7s92ms 7s92ms 17 1 6s919ms 6s919ms 18 1 7s93ms 7s93ms 19 1 7s24ms 7s24ms 20 1 7s902ms 7s902ms 21 1 6s906ms 6s906ms 22 1 7s150ms 7s150ms 23 1 6s955ms 6s955ms Aug 26 00 1 7s46ms 7s46ms 01 1 7s242ms 7s242ms 02 1 7s139ms 7s139ms 03 1 7s55ms 7s55ms 04 1 6s967ms 6s967ms 05 3 21s259ms 7s86ms 06 1 7s227ms 7s227ms 07 1 7s81ms 7s81ms 08 1 7s48ms 7s48ms 09 1 6s938ms 6s938ms 10 1 6s931ms 6s931ms 11 1 7s151ms 7s151ms 12 1 7s52ms 7s52ms 13 1 7s138ms 7s138ms 14 1 7s169ms 7s169ms 15 1 7s274ms 7s274ms 16 1 7s111ms 7s111ms 17 1 6s956ms 6s956ms 18 1 7s60ms 7s60ms 19 1 7s480ms 7s480ms 20 1 6s939ms 6s939ms 21 1 7s497ms 7s497ms 22 1 7s49ms 7s49ms 23 1 7s279ms 7s279ms Aug 27 00 1 7s537ms 7s537ms 01 1 7s627ms 7s627ms 02 1 7s240ms 7s240ms 03 1 7s215ms 7s215ms 04 1 6s955ms 6s955ms 05 3 21s386ms 7s128ms 06 1 6s916ms 6s916ms 07 1 6s779ms 6s779ms 08 1 7s89ms 7s89ms 09 1 7s266ms 7s266ms 10 1 7s135ms 7s135ms 11 1 6s858ms 6s858ms 12 1 7s34ms 7s34ms 13 1 6s969ms 6s969ms 14 1 7s148ms 7s148ms 15 1 7s291ms 7s291ms 16 1 7s160ms 7s160ms 17 1 7s283ms 7s283ms 18 1 6s937ms 6s937ms 19 1 6s986ms 6s986ms 20 1 7s197ms 7s197ms 21 1 7s509ms 7s509ms 22 1 6s975ms 6s975ms 23 1 7s54ms 7s54ms Aug 28 00 1 7s465ms 7s465ms 01 1 6s978ms 6s978ms 02 1 6s950ms 6s950ms 03 1 7s3ms 7s3ms 04 1 7s118ms 7s118ms 05 2 13s779ms 6s889ms 06 1 7s119ms 7s119ms 07 1 6s980ms 6s980ms 08 1 6s993ms 6s993ms 09 1 7s48ms 7s48ms 10 1 6s850ms 6s850ms 11 1 6s919ms 6s919ms 12 1 7s38ms 7s38ms 13 1 6s978ms 6s978ms 14 1 6s989ms 6s989ms 15 1 7s31ms 7s31ms Aug 29 00 1 5s56ms 5s56ms [ User: pubeu - Total duration: 1m51s - Times executed: 16 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-25 20:03:09 Duration: 7s902ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-27 01:03:07 Duration: 7s627ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-27 00:03:24 Duration: 7s537ms Database: ctdprd51 User: pubeu Bind query: yes
2 122 14m23s 5s220ms 8s167ms 7s81ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?)) and ptr.term_object_type_id = ? and ptr.phenotype_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and taxonterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = ? and action_degree_type_nm in (...)) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Aug 24 00 1 6s948ms 6s948ms 01 1 7s153ms 7s153ms 05 5 36s65ms 7s213ms 06 1 7s110ms 7s110ms 07 1 6s981ms 6s981ms 08 1 6s998ms 6s998ms 09 1 7s92ms 7s92ms 10 1 7s58ms 7s58ms 11 1 6s971ms 6s971ms 12 1 6s985ms 6s985ms 14 2 14s159ms 7s79ms 15 1 7s28ms 7s28ms 16 1 7s59ms 7s59ms 17 1 7s94ms 7s94ms 18 1 7s98ms 7s98ms 19 1 7s16ms 7s16ms 20 1 7s20ms 7s20ms 21 1 6s983ms 6s983ms 22 1 7s88ms 7s88ms 23 1 7s25ms 7s25ms Aug 25 00 1 7s40ms 7s40ms 01 1 7s139ms 7s139ms 02 1 7s229ms 7s229ms 03 1 6s970ms 6s970ms 04 1 6s996ms 6s996ms 05 3 21s179ms 7s59ms 06 1 7s73ms 7s73ms 07 1 7s207ms 7s207ms 08 1 7s150ms 7s150ms 09 1 7s106ms 7s106ms 10 1 7s63ms 7s63ms 11 1 6s957ms 6s957ms 12 1 6s992ms 6s992ms 13 1 7s73ms 7s73ms 14 1 6s834ms 6s834ms 15 1 7s8ms 7s8ms 16 1 7s171ms 7s171ms 17 1 6s993ms 6s993ms 18 1 7s197ms 7s197ms 19 1 7s20ms 7s20ms 20 1 7s371ms 7s371ms 21 1 7s57ms 7s57ms 22 1 7s208ms 7s208ms 23 1 6s888ms 6s888ms Aug 26 00 1 7s169ms 7s169ms 01 1 7s7ms 7s7ms 02 1 7s24ms 7s24ms 03 2 14s85ms 7s42ms 04 1 7s4ms 7s4ms 05 3 20s961ms 6s987ms 06 1 6s960ms 6s960ms 07 1 7s102ms 7s102ms 08 1 7s126ms 7s126ms 09 1 7s63ms 7s63ms 10 1 6s962ms 6s962ms 11 1 6s856ms 6s856ms 12 1 7s76ms 7s76ms 13 1 7s105ms 7s105ms 14 1 7s70ms 7s70ms 15 1 7s87ms 7s87ms 16 1 7s110ms 7s110ms 17 1 6s977ms 6s977ms 18 1 7s190ms 7s190ms 19 1 7s310ms 7s310ms 20 1 7s96ms 7s96ms 21 1 7s989ms 7s989ms 22 1 8s167ms 8s167ms 23 1 7s105ms 7s105ms Aug 27 00 1 7s497ms 7s497ms 01 1 7s57ms 7s57ms 02 1 7s265ms 7s265ms 03 1 7s281ms 7s281ms 04 1 7s351ms 7s351ms 05 3 21s348ms 7s116ms 06 1 7s397ms 7s397ms 07 1 6s873ms 6s873ms 08 1 6s739ms 6s739ms 09 1 7s59ms 7s59ms 10 1 7s747ms 7s747ms 11 1 6s877ms 6s877ms 12 2 12s251ms 6s125ms 13 1 7s4ms 7s4ms 14 1 7s95ms 7s95ms 15 1 7s323ms 7s323ms 16 1 7s141ms 7s141ms 17 1 7s13ms 7s13ms 18 1 7s234ms 7s234ms 19 1 7s85ms 7s85ms 20 1 6s866ms 6s866ms 21 1 7s44ms 7s44ms 22 1 7s156ms 7s156ms 23 1 7s12ms 7s12ms Aug 28 00 1 6s943ms 6s943ms 01 1 7s12ms 7s12ms 02 1 6s911ms 6s911ms 03 1 7s10ms 7s10ms 04 1 6s988ms 6s988ms 05 2 14s199ms 7s99ms 06 1 7s271ms 7s271ms 07 1 6s968ms 6s968ms 08 1 7s468ms 7s468ms 09 1 6s954ms 6s954ms 10 1 6s968ms 6s968ms 11 1 7s174ms 7s174ms 12 1 6s898ms 6s898ms 13 1 6s974ms 6s974ms 14 1 6s939ms 6s939ms 15 1 7s40ms 7s40ms [ User: pubeu - Total duration: 13m14s - Times executed: 112 ]
[ User: qaeu - Total duration: 33s539ms - Times executed: 5 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9606' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-26 22:03:12 Duration: 8s167ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9606' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-26 21:03:00 Duration: 7s989ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9606' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-08-27 10:02:59 Duration: 7s747ms Database: ctdprd51 User: pubeu Bind query: yes
3 85 7m15s 5s1ms 5s618ms 5s119ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ? or d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Aug 24 05 4 20s402ms 5s100ms 09 1 5s49ms 5s49ms 13 1 5s51ms 5s51ms 14 1 5s41ms 5s41ms 18 1 5s22ms 5s22ms 22 1 5s86ms 5s86ms Aug 25 05 1 5s18ms 5s18ms 11 1 5s39ms 5s39ms 13 1 5s5ms 5s5ms Aug 26 02 1 5s21ms 5s21ms 07 1 5s87ms 5s87ms 12 1 5s120ms 5s120ms 16 1 5s192ms 5s192ms 19 1 5s256ms 5s256ms 20 1 5s234ms 5s234ms 21 1 5s273ms 5s273ms 22 1 5s33ms 5s33ms 23 1 5s238ms 5s238ms Aug 27 02 1 5s79ms 5s79ms 04 1 5s63ms 5s63ms 05 2 10s302ms 5s151ms 06 1 5s1ms 5s1ms 07 1 5s15ms 5s15ms 10 1 5s5ms 5s5ms 11 1 5s49ms 5s49ms 12 2 10s282ms 5s141ms 15 1 5s241ms 5s241ms 16 1 5s40ms 5s40ms 17 1 5s160ms 5s160ms 18 1 5s3ms 5s3ms 22 1 5s10ms 5s10ms Aug 28 00 1 5s481ms 5s481ms 01 1 5s11ms 5s11ms 03 1 5s618ms 5s618ms 05 2 10s203ms 5s101ms 08 1 5s24ms 5s24ms 10 1 5s20ms 5s20ms 16 1 5s349ms 5s349ms 18 1 5s7ms 5s7ms 19 1 5s88ms 5s88ms 20 1 5s102ms 5s102ms 21 1 5s271ms 5s271ms 23 1 5s78ms 5s78ms Aug 29 01 1 5s81ms 5s81ms 02 1 5s12ms 5s12ms 04 1 5s577ms 5s577ms 05 3 15s418ms 5s139ms 06 1 5s6ms 5s6ms 07 1 5s139ms 5s139ms 11 1 5s63ms 5s63ms 12 1 5s79ms 5s79ms 13 1 5s390ms 5s390ms 14 1 5s104ms 5s104ms 15 1 5s81ms 5s81ms 17 1 5s382ms 5s382ms 18 1 5s262ms 5s262ms 20 1 5s134ms 5s134ms 21 1 5s50ms 5s50ms 22 1 5s130ms 5s130ms 23 1 5s11ms 5s11ms Aug 30 00 1 5s188ms 5s188ms 01 1 5s46ms 5s46ms 03 1 5s14ms 5s14ms 04 1 5s150ms 5s150ms 05 2 10s233ms 5s116ms 06 1 5s66ms 5s66ms 07 1 5s45ms 5s45ms 09 1 5s43ms 5s43ms 11 1 5s213ms 5s213ms 12 1 5s94ms 5s94ms 15 1 5s33ms 5s33ms 16 1 5s55ms 5s55ms 17 1 5s81ms 5s81ms 21 1 5s135ms 5s135ms 22 1 5s98ms 5s98ms 23 1 5s29ms 5s29ms [ User: pubeu - Total duration: 6m49s - Times executed: 80 ]
[ User: qaeu - Total duration: 20s265ms - Times executed: 4 ]
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1319292)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2025-08-28 03:02:29 Duration: 5s618ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1322208)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2025-08-29 04:02:35 Duration: 5s577ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1319292)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2025-08-28 00:02:31 Duration: 5s481ms Database: ctdprd51 User: pubeu Bind query: yes
4 74 15m8s 5s351ms 22s474ms 12s280ms select ? AS "Input", phenotypeterm.nm AS "PhenotypeName", phenotypeterm.acc_txt AS "PhenotypeID", diseaseterm.nm AS "DiseaseName", diseaseterm.acc_db_cd || ? || diseaseterm.acc_txt "DiseaseID", ( select string_agg(distinct geneterm.nm, ?) from term geneterm, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and ptr.via_term_id = geneterm.id and ptr.via_term_object_type_id = ?) AS "GeneInferenceNetwork", ( select string_agg(distinct chemterm.nm, ?) from term chemterm, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and ptr.via_term_id = chemterm.id and ptr.via_term_object_type_id = ?) AS "ChemInferenceNetwork", ( select string_agg(distinct r.acc_txt, ?) from reference r, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and (r.id = ptr.reference_id or r.id = ptr.term_reference_id)) AS "PubMedIDs" from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where (phenotypeterm.id = ?) and diseaseterm.object_type_id = ?;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Aug 25 16 16 3m17s 12s351ms 17 20 4m3s 12s169ms Aug 29 13 24 5m11s 12s981ms 14 14 2m36s 11s159ms [ User: pubeu - Total duration: 11m29s - Times executed: 55 ]
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SELECT /* BatchDiseasePhenotypeAssnsDAO */ 'go:0006915' AS "Input", phenotypeTerm.nm as "PhenotypeName", phenotypeTerm.acc_txt as "PhenotypeID", diseaseTerm.nm as "DiseaseName", diseaseTerm.acc_db_cd || ':' || diseaseTerm.acc_txt "DiseaseID", ( SELECT STRING_AGG(distinct geneTerm.nm, '|') from term geneTerm, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and ptr.via_term_id = geneTerm.id and ptr.via_term_object_type_id = 4) AS "GeneInferenceNetwork", ( SELECT STRING_AGG(distinct chemTerm.nm, '|') from term chemTerm, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and ptr.via_term_id = chemTerm.id and ptr.via_term_object_type_id = 2) AS "ChemInferenceNetwork", ( SELECT STRING_AGG(distinct r.acc_txt, '|') from reference r, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and (r.id = ptr.reference_id or r.id = ptr.term_reference_id)) AS "PubMedIDs" FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE (phenotypeTerm.id = 1268254) and diseaseTerm.object_type_id = 3;
Date: 2025-08-29 14:02:25 Duration: 22s474ms Bind query: yes
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SELECT /* BatchDiseasePhenotypeAssnsDAO */ 'go:0006915' AS "Input", phenotypeTerm.nm as "PhenotypeName", phenotypeTerm.acc_txt as "PhenotypeID", diseaseTerm.nm as "DiseaseName", diseaseTerm.acc_db_cd || ':' || diseaseTerm.acc_txt "DiseaseID", ( SELECT STRING_AGG(distinct geneTerm.nm, '|') from term geneTerm, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and ptr.via_term_id = geneTerm.id and ptr.via_term_object_type_id = 4) AS "GeneInferenceNetwork", ( SELECT STRING_AGG(distinct chemTerm.nm, '|') from term chemTerm, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and ptr.via_term_id = chemTerm.id and ptr.via_term_object_type_id = 2) AS "ChemInferenceNetwork", ( SELECT STRING_AGG(distinct r.acc_txt, '|') from reference r, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and (r.id = ptr.reference_id or r.id = ptr.term_reference_id)) AS "PubMedIDs" FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE (phenotypeTerm.id = 1268254) and diseaseTerm.object_type_id = 3;
Date: 2025-08-29 13:39:10 Duration: 21s955ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchDiseasePhenotypeAssnsDAO */ 'go:0006915' AS "Input", phenotypeTerm.nm as "PhenotypeName", phenotypeTerm.acc_txt as "PhenotypeID", diseaseTerm.nm as "DiseaseName", diseaseTerm.acc_db_cd || ':' || diseaseTerm.acc_txt "DiseaseID", ( SELECT STRING_AGG(distinct geneTerm.nm, '|') from term geneTerm, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and ptr.via_term_id = geneTerm.id and ptr.via_term_object_type_id = 4) AS "GeneInferenceNetwork", ( SELECT STRING_AGG(distinct chemTerm.nm, '|') from term chemTerm, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and ptr.via_term_id = chemTerm.id and ptr.via_term_object_type_id = 2) AS "ChemInferenceNetwork", ( SELECT STRING_AGG(distinct r.acc_txt, '|') from reference r, phenotype_term_reference ptr where pt.phenotype_id = ptr.phenotype_id and pt.term_id = ptr.term_id and (r.id = ptr.reference_id or r.id = ptr.term_reference_id)) AS "PubMedIDs" FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE (phenotypeTerm.id = 1268254) and diseaseTerm.object_type_id = 3;
Date: 2025-08-29 14:25:44 Duration: 21s310ms Database: ctdprd51 User: pubeu Bind query: yes
5 60 54m1s 5s483ms 7m18s 54s33ms select * from pgbulkload.pg_bulkload (?);Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Aug 26 14 14 6m45s 28s954ms 15 24 22m17s 55s736ms 17 3 1m6s 22s316ms 20 4 8m47s 2m11s 21 3 6m59s 2m19s 22 11 7m44s 42s191ms 23 1 20s815ms 20s815ms [ User: load - Total duration: 15m15s - Times executed: 16 ]
[ Application: pg_bulkload - Total duration: 15m15s - Times executed: 16 ]
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.GENE_DISEASE_REFERENCE,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.log,parse-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.DUPE}');
Date: 2025-08-26 20:32:46 Duration: 7m18s Database: ctdprd51 User: load Application: pg_bulkload Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.DAG_PATH,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.log,parse-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.DUPE}');
Date: 2025-08-26 21:04:39 Duration: 5m16s Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=edit.DB_LINK,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.log,parse-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.DUPE}');
Date: 2025-08-26 14:58:44 Duration: 4m22s Bind query: yes
6 28 2m35s 5s36ms 6s716ms 5s559ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Aug 24 10 1 5s90ms 5s90ms 20 3 18s52ms 6s17ms Aug 25 09 2 10s748ms 5s374ms 10 1 5s459ms 5s459ms Aug 26 09 1 5s772ms 5s772ms 13 3 16s83ms 5s361ms 14 1 5s36ms 5s36ms 21 1 6s716ms 6s716ms Aug 27 06 2 11s230ms 5s615ms 13 1 5s466ms 5s466ms 21 1 5s244ms 5s244ms Aug 28 00 1 5s56ms 5s56ms 02 1 5s268ms 5s268ms 10 1 5s131ms 5s131ms 22 1 6s298ms 6s298ms Aug 29 06 1 5s426ms 5s426ms 10 1 5s238ms 5s238ms 15 1 5s966ms 5s966ms 21 1 5s956ms 5s956ms Aug 30 08 2 10s924ms 5s462ms 11 1 5s498ms 5s498ms [ User: pubeu - Total duration: 2m24s - Times executed: 26 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1371691' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-08-26 21:44:26 Duration: 6s716ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1299157' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-08-24 20:57:09 Duration: 6s333ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1426274' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-08-28 22:43:36 Duration: 6s298ms Database: ctdprd51 User: pubeu Bind query: yes
7 19 1m53s 5s12ms 17s966ms 5s974ms select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Aug 24 23 1 5s492ms 5s492ms Aug 25 05 1 17s966ms 17s966ms 07 1 5s738ms 5s738ms 14 1 5s216ms 5s216ms Aug 26 20 2 10s183ms 5s91ms 22 2 10s104ms 5s52ms 23 6 31s863ms 5s310ms Aug 27 03 2 10s794ms 5s397ms 13 1 5s94ms 5s94ms Aug 28 03 1 5s12ms 5s12ms Aug 30 07 1 6s47ms 6s47ms [ User: pubeu - Total duration: 1m48s - Times executed: 18 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1416967') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1416967') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2025-08-25 05:09:35 Duration: 17s966ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1364405') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1364405') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2025-08-30 07:52:31 Duration: 6s47ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1361490') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1361490') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2025-08-25 07:48:26 Duration: 5s738ms Database: ctdprd51 User: pubeu Bind query: yes
8 11 2m11s 8s982ms 14s433ms 11s965ms select distinct i.root_id, edit.get_ixn_prose (i.root_id), o.cd, a.acc_txt as term_acc_txt, a.object_nm as term_nm, a.seq_acc_txt, t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, ?), taxon.nm from edit.ixn_actor a left outer join pub2.term t on a.acc_txt = t.acc_txt and a.object_type_id = t.object_type_id inner join edit.object_type o on a.object_type_id = o.id inner join edit.ixn i on a.ixn_id = i.id inner join edit.reference_ixn ri on i.root_id = ri.ixn_id left outer join pub2.term taxon on ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = ? where (upper(a.object_nm) <> upper(t.nm) or t.nm is null) union select distinct i.root_id, edit.get_ixn_prose (i.root_id), ?, a.anatomy_acc_txt as term_acc_txt, a.anatomy_nm as term_nm, ?, t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, ?), taxon.nm from edit.reference_ixn_anatomy a left outer join pub2.term t on a.anatomy_acc_txt = t.acc_txt and t.object_type_id = ? inner join edit.reference_ixn ri on a.reference_ixn_id = ri.id inner join edit.ixn i on ri.ixn_id = i.id left outer join pub2.term taxon on ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = ? where (upper(a.anatomy_nm) <> upper(t.nm) or t.nm is null) union select e.id, ?, ?, etn.anatomy_acc_txt as term_acc_txt, etn.anatomy_term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_anatomy etn left outer join pub2.term t on etn.anatomy_acc_txt = t.acc_txt and ? = t.object_type_id inner join edit.object_type o on ? = o.id inner join edit.exposure e on e.exp_outcome_id = etn.exp_outcome_id where (upper(etn.anatomy_term_nm) <> upper(t.nm) or t.nm is null) and anatomy_acc_txt is not null and anatomy_acc_txt <> ? union select e.id, ?, ?, etn.chem_acc_txt as term_acc_txt, etn.chem_term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_stressor etn left outer join pub2.term t on etn.chem_acc_txt = t.acc_txt and ? = t.object_type_id inner join edit.object_type o on ? = o.id inner join edit.exposure e on e.exp_stressor_id = etn.id where (upper(etn.chem_term_nm) <> upper(t.nm) or t.nm is null) and chem_acc_txt is not null and chem_acc_txt <> ? union select e.id, ?, ?, etn.disease_acc_txt as term_acc_txt, etn.disease_term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_outcome etn left outer join pub2.term t on etn.disease_acc_txt = t.acc_txt and ? = t.object_type_id inner join edit.object_type o on ? = o.id inner join edit.exposure e on e.exp_outcome_id = etn.id where (upper(etn.disease_term_nm) <> upper(t.nm) or t.nm is null) and disease_acc_txt is not null and disease_acc_txt <> ? union select e.id, ?, ?, etn.phenotype_acc_txt as term_acc_txt, etn.phenotype_term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_outcome etn left outer join pub2.term t on etn.phenotype_acc_txt = t.acc_txt and ? = t.object_type_id inner join edit.object_type o on ? = o.id inner join edit.exposure e on e.exp_outcome_id = etn.id where (upper(etn.phenotype_term_nm) <> upper(t.nm) or t.nm is null) and phenotype_acc_txt is not null and phenotype_acc_txt <> ? union select e.id, ?, o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_receptor etn left outer join pub2.term t on etn.term_acc_txt = t.acc_txt and etn.object_type_id = t.object_type_id inner join edit.object_type o on etn.object_type_id = o.id inner join edit.exposure e on e.exp_receptor_id = etn.id where (upper(etn.term_nm) <> upper(t.nm) or t.nm is null) and term_acc_txt is not null and term_acc_txt <> ? union select etn.id, ?, o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, ?, t.nm, t.acc_txt, ?, ?, ?, ? from edit.medium etn left outer join pub2.term t on etn.term_acc_txt = t.acc_txt and etn.term_object_type_id = t.object_type_id inner join edit.object_type o on etn.term_object_type_id = o.id where (upper(etn.term_nm) <> upper(t.nm) or t.nm is null) and etn.term_acc_txt is not null and etn.term_acc_txt <> ? union select etn.id, ?, o.cd, etn.exp_marker_acc_txt as term_acc_txt, etn.exp_marker_term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_event etn inner join edit.exp_marker_type emt on etn.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on etn.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id inner join edit.exposure e on e.exp_event_id = etn.id where (upper(etn.exp_marker_term_nm) <> upper(t.nm) or t.nm is null) and etn.exp_marker_acc_txt is not null and exp_marker_acc_txt <> ? order by term_nm, term_acc_txt;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Aug 28 15 1 14s433ms 14s433ms Aug 29 07 2 24s382ms 12s191ms 08 5 1m 12s39ms 09 3 32s608ms 10s869ms [ User: editeu - Total duration: 45s897ms - Times executed: 4 ]
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select distinct i.root_id, edit.get_ixn_prose (i.root_id), o.cd, a.acc_txt as term_acc_txt, a.object_nm as term_nm, a.seq_acc_txt, t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.IXN_ACTOR a LEFT OUTER JOIN pub2.TERM t ON a.acc_txt = t.acc_txt AND a.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON a.object_type_id = o.id INNER JOIN edit.IXN i ON a.ixn_id = i.id INNER JOIN edit.REFERENCE_IXN ri ON i.root_id = ri.ixn_id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.object_nm) <> upper(t.nm) OR t.nm is null) UNION select distinct i.root_id, edit.get_ixn_prose (i.root_id), 'anatomy', a.anatomy_acc_txt as term_acc_txt, a.anatomy_nm as term_nm, '', t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.REFERENCE_IXN_ANATOMY a LEFT OUTER JOIN pub2.TERM t ON a.anatomy_acc_txt = t.acc_txt AND t.object_type_id = 10 INNER JOIN edit.REFERENCE_IXN ri ON a.reference_ixn_id = ri.id INNER JOIN edit.IXN i ON ri.ixn_id = i.id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.anatomy_nm) <> upper(t.nm) OR t.nm is null) UNION select e.id, '', 'anatomy', etn.anatomy_acc_txt as term_acc_txt, etn.anatomy_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_ANATOMY etn LEFT OUTER JOIN pub2.TERM t ON etn.anatomy_acc_txt = t.acc_txt AND 10 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 10 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.exp_outcome_id WHERE (upper(etn.anatomy_term_nm) <> upper(t.nm) OR t.nm is null) and anatomy_acc_txt is not null AND anatomy_acc_txt <> '' UNION select e.id, '', 'chem', etn.chem_acc_txt as term_acc_txt, etn.chem_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_STRESSOR etn LEFT OUTER JOIN pub2.TERM t ON etn.chem_acc_txt = t.acc_txt AND 2 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 2 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_stressor_id = etn.id WHERE (upper(etn.chem_term_nm) <> upper(t.nm) OR t.nm is null) and chem_acc_txt is not null AND chem_acc_txt <> '' UNION select e.id, '', 'disease', etn.disease_acc_txt as term_acc_txt, etn.disease_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.disease_acc_txt = t.acc_txt AND 3 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 3 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.disease_term_nm) <> upper(t.nm) OR t.nm is null) and disease_acc_txt is not null AND disease_acc_txt <> '' UNION select e.id, '', 'go', etn.phenotype_acc_txt as term_acc_txt, etn.PHENOTYPE_TERM_NM as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.phenotype_acc_txt = t.acc_txt AND 5 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 5 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.PHENOTYPE_TERM_NM) <> upper(t.nm) OR t.nm is null) and phenotype_acc_txt is not null AND phenotype_acc_txt <> '' UNION select e.id, '', o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_RECEPTOR etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.object_type_id = o.id INNER JOIN edit.EXPOSURE e ON e.exp_receptor_id = etn.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and term_acc_txt is not null AND term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Medium Record - No Seq', t.nm, t.acc_txt, '', -- reference accession '', -- create_by '', -- create_tm 'Medium Record - no Taxon' from edit.MEDIUM etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.term_object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.term_object_type_id = o.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and etn.term_acc_txt is not null AND etn.term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.exp_marker_acc_txt as term_acc_txt, etn.exp_marker_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_EVENT etn INNER JOIN edit.EXP_MARKER_TYPE emt ON etn.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON etn.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id INNER JOIN edit.EXPOSURE e ON e.exp_event_id = etn.id WHERE (upper(etn.exp_marker_term_nm) <> upper(t.nm) OR t.nm is null) and etn.exp_marker_acc_txt is not null AND exp_marker_acc_txt <> '' order by term_nm, term_acc_txt;
Date: 2025-08-28 15:13:30 Duration: 14s433ms Bind query: yes
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select distinct i.root_id, edit.get_ixn_prose (i.root_id), o.cd, a.acc_txt as term_acc_txt, a.object_nm as term_nm, a.seq_acc_txt, t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.IXN_ACTOR a LEFT OUTER JOIN pub2.TERM t ON a.acc_txt = t.acc_txt AND a.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON a.object_type_id = o.id INNER JOIN edit.IXN i ON a.ixn_id = i.id INNER JOIN edit.REFERENCE_IXN ri ON i.root_id = ri.ixn_id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.object_nm) <> upper(t.nm) OR t.nm is null) UNION select distinct i.root_id, edit.get_ixn_prose (i.root_id), 'anatomy', a.anatomy_acc_txt as term_acc_txt, a.anatomy_nm as term_nm, '', t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.REFERENCE_IXN_ANATOMY a LEFT OUTER JOIN pub2.TERM t ON a.anatomy_acc_txt = t.acc_txt AND t.object_type_id = 10 INNER JOIN edit.REFERENCE_IXN ri ON a.reference_ixn_id = ri.id INNER JOIN edit.IXN i ON ri.ixn_id = i.id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.anatomy_nm) <> upper(t.nm) OR t.nm is null) UNION select e.id, '', 'anatomy', etn.anatomy_acc_txt as term_acc_txt, etn.anatomy_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_ANATOMY etn LEFT OUTER JOIN pub2.TERM t ON etn.anatomy_acc_txt = t.acc_txt AND 10 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 10 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.exp_outcome_id WHERE (upper(etn.anatomy_term_nm) <> upper(t.nm) OR t.nm is null) and anatomy_acc_txt is not null AND anatomy_acc_txt <> '' UNION select e.id, '', 'chem', etn.chem_acc_txt as term_acc_txt, etn.chem_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_STRESSOR etn LEFT OUTER JOIN pub2.TERM t ON etn.chem_acc_txt = t.acc_txt AND 2 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 2 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_stressor_id = etn.id WHERE (upper(etn.chem_term_nm) <> upper(t.nm) OR t.nm is null) and chem_acc_txt is not null AND chem_acc_txt <> '' UNION select e.id, '', 'disease', etn.disease_acc_txt as term_acc_txt, etn.disease_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.disease_acc_txt = t.acc_txt AND 3 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 3 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.disease_term_nm) <> upper(t.nm) OR t.nm is null) and disease_acc_txt is not null AND disease_acc_txt <> '' UNION select e.id, '', 'go', etn.phenotype_acc_txt as term_acc_txt, etn.PHENOTYPE_TERM_NM as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.phenotype_acc_txt = t.acc_txt AND 5 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 5 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.PHENOTYPE_TERM_NM) <> upper(t.nm) OR t.nm is null) and phenotype_acc_txt is not null AND phenotype_acc_txt <> '' UNION select e.id, '', o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_RECEPTOR etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.object_type_id = o.id INNER JOIN edit.EXPOSURE e ON e.exp_receptor_id = etn.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and term_acc_txt is not null AND term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Medium Record - No Seq', t.nm, t.acc_txt, '', -- reference accession '', -- create_by '', -- create_tm 'Medium Record - no Taxon' from edit.MEDIUM etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.term_object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.term_object_type_id = o.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and etn.term_acc_txt is not null AND etn.term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.exp_marker_acc_txt as term_acc_txt, etn.exp_marker_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_EVENT etn INNER JOIN edit.EXP_MARKER_TYPE emt ON etn.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON etn.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id INNER JOIN edit.EXPOSURE e ON e.exp_event_id = etn.id WHERE (upper(etn.exp_marker_term_nm) <> upper(t.nm) OR t.nm is null) and etn.exp_marker_acc_txt is not null AND exp_marker_acc_txt <> '' order by term_nm, term_acc_txt;
Date: 2025-08-29 08:34:55 Duration: 12s886ms Database: ctdprd51 User: editeu Bind query: yes
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select distinct i.root_id, edit.get_ixn_prose (i.root_id), o.cd, a.acc_txt as term_acc_txt, a.object_nm as term_nm, a.seq_acc_txt, t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.IXN_ACTOR a LEFT OUTER JOIN pub2.TERM t ON a.acc_txt = t.acc_txt AND a.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON a.object_type_id = o.id INNER JOIN edit.IXN i ON a.ixn_id = i.id INNER JOIN edit.REFERENCE_IXN ri ON i.root_id = ri.ixn_id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.object_nm) <> upper(t.nm) OR t.nm is null) UNION select distinct i.root_id, edit.get_ixn_prose (i.root_id), 'anatomy', a.anatomy_acc_txt as term_acc_txt, a.anatomy_nm as term_nm, '', t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.REFERENCE_IXN_ANATOMY a LEFT OUTER JOIN pub2.TERM t ON a.anatomy_acc_txt = t.acc_txt AND t.object_type_id = 10 INNER JOIN edit.REFERENCE_IXN ri ON a.reference_ixn_id = ri.id INNER JOIN edit.IXN i ON ri.ixn_id = i.id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.anatomy_nm) <> upper(t.nm) OR t.nm is null) UNION select e.id, '', 'anatomy', etn.anatomy_acc_txt as term_acc_txt, etn.anatomy_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_ANATOMY etn LEFT OUTER JOIN pub2.TERM t ON etn.anatomy_acc_txt = t.acc_txt AND 10 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 10 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.exp_outcome_id WHERE (upper(etn.anatomy_term_nm) <> upper(t.nm) OR t.nm is null) and anatomy_acc_txt is not null AND anatomy_acc_txt <> '' UNION select e.id, '', 'chem', etn.chem_acc_txt as term_acc_txt, etn.chem_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_STRESSOR etn LEFT OUTER JOIN pub2.TERM t ON etn.chem_acc_txt = t.acc_txt AND 2 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 2 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_stressor_id = etn.id WHERE (upper(etn.chem_term_nm) <> upper(t.nm) OR t.nm is null) and chem_acc_txt is not null AND chem_acc_txt <> '' UNION select e.id, '', 'disease', etn.disease_acc_txt as term_acc_txt, etn.disease_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.disease_acc_txt = t.acc_txt AND 3 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 3 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.disease_term_nm) <> upper(t.nm) OR t.nm is null) and disease_acc_txt is not null AND disease_acc_txt <> '' UNION select e.id, '', 'go', etn.phenotype_acc_txt as term_acc_txt, etn.PHENOTYPE_TERM_NM as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.phenotype_acc_txt = t.acc_txt AND 5 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 5 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.PHENOTYPE_TERM_NM) <> upper(t.nm) OR t.nm is null) and phenotype_acc_txt is not null AND phenotype_acc_txt <> '' UNION select e.id, '', o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_RECEPTOR etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.object_type_id = o.id INNER JOIN edit.EXPOSURE e ON e.exp_receptor_id = etn.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and term_acc_txt is not null AND term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Medium Record - No Seq', t.nm, t.acc_txt, '', -- reference accession '', -- create_by '', -- create_tm 'Medium Record - no Taxon' from edit.MEDIUM etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.term_object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.term_object_type_id = o.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and etn.term_acc_txt is not null AND etn.term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.exp_marker_acc_txt as term_acc_txt, etn.exp_marker_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_EVENT etn INNER JOIN edit.EXP_MARKER_TYPE emt ON etn.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON etn.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id INNER JOIN edit.EXPOSURE e ON e.exp_event_id = etn.id WHERE (upper(etn.exp_marker_term_nm) <> upper(t.nm) OR t.nm is null) and etn.exp_marker_acc_txt is not null AND exp_marker_acc_txt <> '' order by term_nm, term_acc_txt;
Date: 2025-08-29 07:34:17 Duration: 12s678ms Bind query: yes
9 10 1m19s 5s241ms 14s292ms 7s943ms select ? "Input", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = d.id) "DiseaseCategories", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(distinct r.acc_txt, ?) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id where (d.id = ?) group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by d.nm_sort, g.nm, "DirectEvidence", c.nm;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Aug 28 08 9 1m14s 8s230ms Aug 29 07 1 5s359ms 5s359ms [ User: pubeu - Total duration: 36s812ms - Times executed: 5 ]
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'mesh:d001943' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE (d.id = 2112126) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2025-08-28 08:03:27 Duration: 14s292ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'mesh:d008175' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE (d.id = 2110132) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2025-08-28 08:03:47 Duration: 12s225ms Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'mesh:d009374' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE (d.id = 2105576) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2025-08-28 08:03:09 Duration: 9s188ms Bind query: yes
10 8 35m55s 5s12ms 35m19s 4m29s select g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(r.acc_txt, ? order by r.acc_txt) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id group by g.nm, g.acc_txt, d.nm, d.acc_db_cd || ? || d.acc_txt, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by g.nm, d.nm;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Aug 27 15 8 35m55s 4m29s [ User: qaeu - Total duration: 35m19s - Times executed: 1 ]
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2025-08-27 15:00:30 Duration: 35m19s Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2025-08-27 15:14:12 Duration: 5s559ms Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2025-08-27 15:07:18 Duration: 5s308ms Bind query: yes
11 8 1m58s 8s717ms 32s562ms 14s866ms select ? "Input", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = d.id) "DiseaseCategories", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(distinct r.acc_txt, ?) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id where d.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by d.nm_sort, g.nm, "DirectEvidence", c.nm;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Aug 28 08 8 1m58s 14s866ms [ User: pubeu - Total duration: 45s137ms - Times executed: 4 ]
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'mesh:d008113' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2110226) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2025-08-28 08:01:11 Duration: 32s562ms Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'mesh:d002471' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2111847) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2025-08-28 08:02:46 Duration: 18s371ms Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'mesh:d006528' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2113070) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2025-08-28 08:00:38 Duration: 15s387ms Database: ctdprd51 User: pubeu Bind query: yes
12 8 1m12s 8s982ms 9s182ms 9s89ms select ii.cd, count(ii.id) cnt from ( select ot.cd, tl.term_id id from object_type ot inner join term_label tl on ot.id = tl.object_type_id where tl.nm_fts @@ to_tsquery(?, ?) union select ?, r.id from reference r where r.title_abstract_fts @@ to_tsquery(?, ?) or r.id in ( select rpr.reference_id from reference_party_role rpr inner join reference_party rp on rpr.reference_party_id = rp.id where (substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ?)) union select ot.cd, l.object_id from db_link l inner join object_type ot on l.object_type_id = ot.id where l.type_cd = ? and (upper(l.acc_txt) like ? or upper(l.acc_txt) like ?)) ii group by ii.cd;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Aug 25 07 5 45s481ms 9s96ms Aug 26 03 1 9s142ms 9s142ms 08 2 18s89ms 9s44ms [ User: pubeu - Total duration: 1m3s - Times executed: 7 ]
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', 'JUJUBOSIDE & A_QT') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', 'JUJUBOSIDE & A_QT') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'JUJUBOSIDE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A_QT')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE 'JUJUBOSIDE' OR upper(l.acc_txt) LIKE 'A_QT')) ii GROUP BY ii.cd;
Date: 2025-08-25 07:11:11 Duration: 9s182ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', 'JUJUBOSIDE & A_QT') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', 'JUJUBOSIDE & A_QT') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'JUJUBOSIDE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A_QT')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE 'JUJUBOSIDE' OR upper(l.acc_txt) LIKE 'A_QT')) ii GROUP BY ii.cd;
Date: 2025-08-25 07:11:16 Duration: 9s152ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', 'PORIFERASTEROL & MONOGLUCOSIDE_QT') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', 'PORIFERASTEROL & MONOGLUCOSIDE_QT') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PORIFERASTEROL' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'MONOGLUCOSIDE_QT')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE 'PORIFERASTEROL' OR upper(l.acc_txt) LIKE 'MONOGLUCOSIDE_QT')) ii GROUP BY ii.cd;
Date: 2025-08-26 03:47:35 Duration: 9s142ms Database: ctdprd51 User: pubeu Bind query: yes
13 7 1h4m21s 8m59s 9m33s 9m11s select maint_query_logs_archive ();Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Aug 24 00 1 8m59s 8m59s Aug 25 00 1 8m59s 8m59s Aug 26 00 1 9m 9m Aug 27 00 1 9m33s 9m33s Aug 28 00 1 9m12s 9m12s Aug 29 00 1 9m28s 9m28s Aug 30 00 1 9m6s 9m6s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-08-27 00:09:35 Duration: 9m33s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-08-29 00:09:30 Duration: 9m28s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-08-28 00:09:14 Duration: 9m12s
14 7 48s452ms 6s612ms 7s864ms 6s921ms vacuum analyze log_query_archive;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Aug 24 00 1 6s697ms 6s697ms Aug 25 00 1 6s992ms 6s992ms Aug 26 00 1 6s612ms 6s612ms Aug 27 00 1 6s692ms 6s692ms Aug 28 00 1 6s869ms 6s869ms Aug 29 00 1 7s864ms 7s864ms Aug 30 00 1 6s722ms 6s722ms -
VACUUM ANALYZE log_query_archive;
Date: 2025-08-29 00:09:38 Duration: 7s864ms
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VACUUM ANALYZE log_query_archive;
Date: 2025-08-25 00:09:09 Duration: 6s992ms
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VACUUM ANALYZE log_query_archive;
Date: 2025-08-28 00:09:21 Duration: 6s869ms
15 6 43s571ms 5s28ms 11s27ms 7s261ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Aug 28 04 2 10s68ms 5s34ms 05 1 5s243ms 5s243ms 10 2 21s591ms 10s795ms Aug 29 00 1 6s667ms 6s667ms [ User: pubeu - Total duration: 43s571ms - Times executed: 6 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2112418') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-08-28 10:05:58 Duration: 11s27ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2112418') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-08-28 10:05:51 Duration: 10s564ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2110927') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-08-29 00:01:21 Duration: 6s667ms Database: ctdprd51 User: pubeu Bind query: yes
16 6 35s540ms 5s662ms 6s242ms 5s923ms select ii.cd, count(ii.id) cnt from ( select ot.cd, tl.term_id id from object_type ot inner join term_label tl on ot.id = tl.object_type_id where tl.nm_fts @@ to_tsquery(?, ?) union select ?, r.id from reference r where r.title_abstract_fts @@ to_tsquery(?, ?) or r.id in ( select rpr.reference_id from reference_party_role rpr inner join reference_party rp on rpr.reference_party_id = rp.id where (substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ?)) union select ot.cd, l.object_id from db_link l inner join object_type ot on l.object_type_id = ot.id where l.type_cd = ? and (upper(l.acc_txt) like ?)) ii group by ii.cd;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Aug 24 05 1 5s662ms 5s662ms Aug 25 12 1 6s8ms 6s8ms Aug 27 14 2 12s388ms 6s194ms Aug 29 01 1 5s755ms 5s755ms 05 1 5s725ms 5s725ms [ User: pubeu - Total duration: 35s540ms - Times executed: 6 ]
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '234989_AT') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '234989_AT') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '234989_AT')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '234989_AT')) ii GROUP BY ii.cd;
Date: 2025-08-27 14:12:36 Duration: 6s242ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '234989_AT') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '234989_AT') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '234989_AT')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '234989_AT')) ii GROUP BY ii.cd;
Date: 2025-08-27 14:12:41 Duration: 6s146ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', 'GO2VEC_100D.TXT') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', 'GO2VEC_100D.TXT') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'GO2VEC_100D.TXT')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE 'GO2VEC_100D.TXT')) ii GROUP BY ii.cd;
Date: 2025-08-25 12:56:23 Duration: 6s8ms Database: ctdprd51 User: pubeu Bind query: yes
17 5 12m45s 38s941ms 10m7s 2m33s select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, to_char(cdr.mod_tm, ?) from pub2.gene_chem_reference gcr, pub2.chem_disease_reference cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = ? and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Aug 26 18 5 12m45s 2m33s [ User: load - Total duration: 10m7s - Times executed: 1 ]
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select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = 'does not affect');
Date: 2025-08-26 18:02:38 Duration: 10m7s Database: ctdprd51 User: load Bind query: yes
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select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = 'does not affect');
Date: 2025-08-26 18:22:34 Duration: 40s38ms Bind query: yes
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select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = 'does not affect');
Date: 2025-08-26 18:33:26 Duration: 39s522ms Bind query: yes
18 5 2m58s 5s318ms 2m26s 35s646ms select phenotypeterm.nm "GOName", phenotypeterm.acc_txt "GOID", diseaseterm.nm "DiseaseName", diseaseterm.acc_db_cd || ? || diseaseterm.acc_txt "DiseaseID", pt.via_chem_qty "InferenceChemicalQty", ( select string_agg(distinct chemtermnetwork.nm, ?)) "InferenceChemicalNames", pt.via_gene_qty "InferenceGeneQty", ( select string_agg(distinct genetermnetwork.nm, ?)) "InferenceGeneSymbols" from phenotype_term_reference ptr inner join phenotype_term pt on ptr.phenotype_id = pt.phenotype_id and ptr.term_id = pt.term_id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id inner join term diseaseterm on ptr.term_id = diseaseterm.id and diseaseterm.object_type_id = ( select id from object_type where cd = ?) left outer join term genetermnetwork on ptr.via_term_id = genetermnetwork.id and genetermnetwork.object_type_id = ( select id from object_type where cd = ?) left outer join term chemtermnetwork on ptr.via_term_id = chemtermnetwork.id and chemtermnetwork.object_type_id = ( select id from object_type where cd = ?) where phenotypeterm.id in ( select dp.descendant_dag_node_id from dag_path dp where dp.ancestor_object_id = ( select id from term where nm = ?)) and ptr.source_cd = ? and ptr.phenotype_id = phenotypeterm.id and ptr.term_id = diseaseterm.id group by phenotypeterm.nm, phenotypeterm.acc_txt, diseaseterm.nm, diseaseterm.acc_db_cd || ? || diseaseterm.acc_txt, pt.via_chem_qty, pt.via_gene_qty;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Aug 27 16 5 2m58s 35s646ms [ User: qaeu - Total duration: 2m39s - Times executed: 2 ]
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SELECT /* PhenotypeDiseasesDAO */ phenotypeTerm.nm "GOName", phenotypeTerm.acc_txt "GOID", diseaseTerm.nm "DiseaseName", diseaseTerm.acc_db_cd || ':' || diseaseTerm.acc_txt "DiseaseID", pt.via_chem_qty "InferenceChemicalQty", ( SELECT STRING_AGG(DISTINCT chemTermNetwork.nm, '|')) "InferenceChemicalNames", pt.via_gene_qty "InferenceGeneQty", ( SELECT STRING_AGG(DISTINCT geneTermNetwork.nm, '|')) "InferenceGeneSymbols" FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt on ptr.phenotype_id = pt.phenotype_id AND ptr.term_id = pt.term_id INNER JOIN term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id INNER JOIN term diseaseTerm on ptr.term_id = diseaseTerm.id AND diseaseTerm.object_type_id = ( select id from object_type where cd = 'disease') LEFT OUTER JOIN term geneTermNetwork on ptr.via_term_id = geneTermNetwork.id AND geneTermNetwork.object_type_id = ( select id from object_type where cd = 'gene') LEFT OUTER JOIN term chemTermNetwork on ptr.via_term_id = chemTermNetwork.id AND chemTermNetwork.object_type_id = ( select id from object_type where cd = 'chem') WHERE phenotypeTerm.id IN ( SELECT dp.descendant_dag_node_id FROM dag_path dp WHERE dp.ancestor_object_id = ( select id from term where nm = 'biological_process')) AND ptr.source_cd = 'I' AND ptr.phenotype_id = phenotypeTerm.id AND ptr.term_id = diseaseTerm.id GROUP BY phenotypeTerm.nm, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.acc_db_cd || ':' || diseaseTerm.acc_txt, pt.via_chem_qty, pt.via_gene_qty;
Date: 2025-08-27 16:12:28 Duration: 2m26s Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* PhenotypeDiseasesDAO */ phenotypeTerm.nm "GOName", phenotypeTerm.acc_txt "GOID", diseaseTerm.nm "DiseaseName", diseaseTerm.acc_db_cd || ':' || diseaseTerm.acc_txt "DiseaseID", pt.via_chem_qty "InferenceChemicalQty", ( SELECT STRING_AGG(DISTINCT chemTermNetwork.nm, '|')) "InferenceChemicalNames", pt.via_gene_qty "InferenceGeneQty", ( SELECT STRING_AGG(DISTINCT geneTermNetwork.nm, '|')) "InferenceGeneSymbols" FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt on ptr.phenotype_id = pt.phenotype_id AND ptr.term_id = pt.term_id INNER JOIN term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id INNER JOIN term diseaseTerm on ptr.term_id = diseaseTerm.id AND diseaseTerm.object_type_id = ( select id from object_type where cd = 'disease') LEFT OUTER JOIN term geneTermNetwork on ptr.via_term_id = geneTermNetwork.id AND geneTermNetwork.object_type_id = ( select id from object_type where cd = 'gene') LEFT OUTER JOIN term chemTermNetwork on ptr.via_term_id = chemTermNetwork.id AND chemTermNetwork.object_type_id = ( select id from object_type where cd = 'chem') WHERE phenotypeTerm.id IN ( SELECT dp.descendant_dag_node_id FROM dag_path dp WHERE dp.ancestor_object_id = ( select id from term where nm = 'molecular_function')) AND ptr.source_cd = 'I' AND ptr.phenotype_id = phenotypeTerm.id AND ptr.term_id = diseaseTerm.id GROUP BY phenotypeTerm.nm, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.acc_db_cd || ':' || diseaseTerm.acc_txt, pt.via_chem_qty, pt.via_gene_qty;
Date: 2025-08-27 16:14:25 Duration: 12s785ms Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* PhenotypeDiseasesDAO */ phenotypeTerm.nm "GOName", phenotypeTerm.acc_txt "GOID", diseaseTerm.nm "DiseaseName", diseaseTerm.acc_db_cd || ':' || diseaseTerm.acc_txt "DiseaseID", pt.via_chem_qty "InferenceChemicalQty", ( SELECT STRING_AGG(DISTINCT chemTermNetwork.nm, '|')) "InferenceChemicalNames", pt.via_gene_qty "InferenceGeneQty", ( SELECT STRING_AGG(DISTINCT geneTermNetwork.nm, '|')) "InferenceGeneSymbols" FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt on ptr.phenotype_id = pt.phenotype_id AND ptr.term_id = pt.term_id INNER JOIN term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id INNER JOIN term diseaseTerm on ptr.term_id = diseaseTerm.id AND diseaseTerm.object_type_id = ( select id from object_type where cd = 'disease') LEFT OUTER JOIN term geneTermNetwork on ptr.via_term_id = geneTermNetwork.id AND geneTermNetwork.object_type_id = ( select id from object_type where cd = 'gene') LEFT OUTER JOIN term chemTermNetwork on ptr.via_term_id = chemTermNetwork.id AND chemTermNetwork.object_type_id = ( select id from object_type where cd = 'chem') WHERE phenotypeTerm.id IN ( SELECT dp.descendant_dag_node_id FROM dag_path dp WHERE dp.ancestor_object_id = ( select id from term where nm = 'biological_process')) AND ptr.source_cd = 'I' AND ptr.phenotype_id = phenotypeTerm.id AND ptr.term_id = diseaseTerm.id GROUP BY phenotypeTerm.nm, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.acc_db_cd || ':' || diseaseTerm.acc_txt, pt.via_chem_qty, pt.via_gene_qty;
Date: 2025-08-27 16:12:41 Duration: 7s49ms Bind query: yes
19 5 2m55s 7s334ms 2m24s 35s23ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Aug 24 01 5 2m55s 35s23ms [ User: pubeu - Total duration: 2m55s - Times executed: 5 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2110136') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2025-08-24 01:13:58 Duration: 2m24s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2110136') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2025-08-24 01:09:32 Duration: 7s784ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2110136') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2025-08-24 01:08:02 Duration: 7s674ms Database: ctdprd51 User: pubeu Bind query: yes
20 4 25s184ms 6s111ms 6s559ms 6s296ms select p.ancestor_object_id, p.descendant_object_id from dag_path p where p.descendant_object_id in ( select go_term_id from gene_go_annot gga where gga.taxon_id = ( select id from term where acc_txt = ? and object_type_id = ( select id from object_type where cd = ?)) and gga.is_not = ?) and p.ancestor_object_id not in ( select c.id from term c where c.acc_txt in (...) and c.object_type_id = ( select id from object_type where cd = ?));Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Aug 26 22 1 6s111ms 6s111ms Aug 27 12 1 6s559ms 6s559ms Aug 28 13 1 6s287ms 6s287ms 15 1 6s225ms 6s225ms [ User: qaeu - Total duration: 12s847ms - Times executed: 2 ]
[ User: pubeu - Total duration: 6s225ms - Times executed: 1 ]
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select p.ancestor_object_id, p.descendant_object_id from DAG_PATH p where p.descendant_object_id in ( select go_term_id from GENE_GO_ANNOT gga where gga.taxon_id = ( select id from TERM where acc_txt = '9606' and object_type_id = ( select id from OBJECT_TYPE where cd = 'taxon')) AND gga.is_not = 'f') and p.ancestor_object_id NOT in ( SELECT c.id FROM TERM c WHERE c.acc_txt in ('ALL') AND c.object_type_id = ( select id from OBJECT_TYPE where cd = 'go'));
Date: 2025-08-27 12:47:32 Duration: 6s559ms Database: ctdprd51 User: qaeu Bind query: yes
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select p.ancestor_object_id, p.descendant_object_id from DAG_PATH p where p.descendant_object_id in ( select go_term_id from GENE_GO_ANNOT gga where gga.taxon_id = ( select id from TERM where acc_txt = '9606' and object_type_id = ( select id from OBJECT_TYPE where cd = 'taxon')) AND gga.is_not = 'f') and p.ancestor_object_id NOT in ( SELECT c.id FROM TERM c WHERE c.acc_txt in ('ALL') AND c.object_type_id = ( select id from OBJECT_TYPE where cd = 'go'));
Date: 2025-08-28 13:45:10 Duration: 6s287ms Database: ctdprd51 User: qaeu Bind query: yes
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select p.ancestor_object_id, p.descendant_object_id from DAG_PATH p where p.descendant_object_id in ( select go_term_id from GENE_GO_ANNOT gga where gga.taxon_id = ( select id from TERM where acc_txt = '9606' and object_type_id = ( select id from OBJECT_TYPE where cd = 'taxon')) AND gga.is_not = 'f') and p.ancestor_object_id NOT in ( SELECT c.id FROM TERM c WHERE c.acc_txt in ('ALL') AND c.object_type_id = ( select id from OBJECT_TYPE where cd = 'go'));
Date: 2025-08-28 15:09:18 Duration: 6s225ms Database: ctdprd51 User: pubeu Bind query: yes
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 2h9m11s 2h9m11s 2h9m11s 1 2h9m11s select pub2.maint_term_derive_data ();Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Aug 27 06 1 2h9m11s 2h9m11s -
select pub2.maint_term_derive_data ();
Date: 2025-08-27 06:05:18 Duration: 2h9m11s Bind query: yes
2 1h49m51s 1h49m51s 1h49m51s 1 1h49m51s select pub2.maint_gene_chem_ref_gene_form_refresh ();Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Aug 27 01 1 1h49m51s 1h49m51s -
select pub2.maint_gene_chem_ref_gene_form_refresh ();
Date: 2025-08-27 01:56:14 Duration: 1h49m51s Bind query: yes
3 1h1m53s 1h1m53s 1h1m53s 1 1h1m53s select maint_term_derive_nm_fts ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Aug 27 03 1 1h1m53s 1h1m53s -
SELECT maint_term_derive_nm_fts ();
Date: 2025-08-27 03:01:06 Duration: 1h1m53s Bind query: yes
4 50m27s 50m27s 50m27s 1 50m27s select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.gene_go_annot gga, pub2.phenotype_term_reference ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Aug 26 20 1 50m27s 50m27s -
select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.GENE_GO_ANNOT gga, pub2.PHENOTYPE_TERM_REFERENCE ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');
Date: 2025-08-26 20:20:22 Duration: 50m27s Bind query: yes
5 0ms 48m52s 48m52s 1 48m52s vacuum full analyze;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Aug 27 03 1 48m52s 48m52s -
VACUUM FULL ANALYZE;
Date: 2025-08-27 03:55:44 Duration: 48m52s Bind query: yes
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VACUUM FULL ANALYZE;
Date: 2025-08-27 03:06:53 Duration: 0ms
6 42m47s 42m47s 42m47s 1 42m47s select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.object_type where cd = ?), ptr.term_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.phenotype_term_reference ptr, pub2.phenotype_term_reference ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Aug 26 19 1 42m47s 42m47s -
select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');
Date: 2025-08-26 19:29:48 Duration: 42m47s Bind query: yes
7 33m51s 33m51s 33m51s 1 33m51s select i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) from edit.ixn i, edit.reference_ixn r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in (...) order by i.id asc;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Aug 26 17 1 33m51s 33m51s [ User: load - Total duration: 33m51s - Times executed: 1 ]
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SELECT i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) FROM edit.IXN i, edit.REFERENCE_IXN r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in ('bogusName') order by i.id asc;
Date: 2025-08-26 17:49:39 Duration: 33m51s Database: ctdprd51 User: load Bind query: yes
8 32m56s 32m56s 32m56s 1 32m56s select pub2.maint_cached_value_refresh_data_metrics ();Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Aug 27 06 1 32m56s 32m56s -
select pub2.maint_cached_value_refresh_data_metrics ();
Date: 2025-08-27 06:48:13 Duration: 32m56s Bind query: yes
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select pub2.maint_cached_value_refresh_data_metrics ();
Date: 2025-08-27 06:43:44 Duration: 0ms
9 26m46s 26m46s 26m46s 1 26m46s insert into pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.gene_go_annot;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Aug 26 17 1 26m46s 26m46s -
insert into pub2.GENE_GO_ANNOT (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.GENE_GO_ANNOT;
Date: 2025-08-26 17:07:17 Duration: 26m46s Bind query: yes
10 25m41s 25m41s 25m41s 1 25m41s update pub2.gene_disease gd set exposure_reference_qty = ( select count(distinct reference_id) from pub2.gene_disease_reference gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub2.reference r where has_exposures = true));Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Aug 27 00 1 25m41s 25m41s -
update pub2.GENE_DISEASE gd set exposure_reference_qty = ( select count(distinct reference_id) from pub2.GENE_DISEASE_REFERENCE gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub2.REFERENCE r where has_exposures = true));
Date: 2025-08-27 00:00:49 Duration: 25m41s Bind query: yes
11 14m33s 14m33s 14m33s 1 14m33s insert into pub2.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary) select object_id, object_type_id, acc_txt, db_id, type_cd, is_primary from edit.db_link;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Aug 26 16 1 14m33s 14m33s [ User: pub2 - Total duration: 14m33s - Times executed: 1 ]
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insert into pub2.DB_LINK (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary) select object_id, object_type_id, acc_txt, db_id, type_cd, is_primary from edit.DB_LINK;
Date: 2025-08-26 16:35:03 Duration: 14m33s Database: ctdprd51 User: pub2 Bind query: yes
12 14m17s 14m17s 14m17s 1 14m17s alter table pub2.term_enrichment_agent add constraint term_enr_agent_term_enr_fk foreign key (term_id, enriched_term_id) references term_enrichment (term_id, enriched_term_id);Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Aug 26 23 1 14m17s 14m17s -
ALTER TABLE pub2.term_enrichment_agent ADD CONSTRAINT term_enr_agent_term_enr_fk FOREIGN KEY (term_id, enriched_term_id) REFERENCES term_enrichment (term_id, enriched_term_id);
Date: 2025-08-26 23:08:13 Duration: 14m17s Bind query: yes
13 11m33s 11m42s 11m38s 2 23m16s select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.gene_id = any (array (( select ai.gene_id from dag_path pi inner join gene_go_annot ai on pi.descendant_object_id = ai.go_term_id inner join db_link dbli on dbli.object_id = pi.ancestor_object_id where dbli.acc_txt = ? and dbli.type_cd = ? and dbli.object_type_id = ?))) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by c.nm_sort, g.nm_sort, i.sort_txt limit ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Aug 24 10 2 23m16s 11m38s [ User: pubeu - Total duration: 23m16s - Times executed: 2 ]
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0006955' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5))) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2025-08-24 10:32:18 Duration: 11m42s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0006955' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5))) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2025-08-24 10:33:39 Duration: 11m33s Database: ctdprd51 User: pubeu Bind query: yes
14 8m59s 9m33s 9m11s 7 1h4m21s select maint_query_logs_archive ();Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Aug 24 00 1 8m59s 8m59s Aug 25 00 1 8m59s 8m59s Aug 26 00 1 9m 9m Aug 27 00 1 9m33s 9m33s Aug 28 00 1 9m12s 9m12s Aug 29 00 1 9m28s 9m28s Aug 30 00 1 9m6s 9m6s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-08-27 00:09:35 Duration: 9m33s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-08-29 00:09:30 Duration: 9m28s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-08-28 00:09:14 Duration: 9m12s
15 5s12ms 35m19s 4m29s 8 35m55s select g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(r.acc_txt, ? order by r.acc_txt) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id group by g.nm, g.acc_txt, d.nm, d.acc_db_cd || ? || d.acc_txt, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by g.nm, d.nm;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Aug 27 15 8 35m55s 4m29s [ User: qaeu - Total duration: 35m19s - Times executed: 1 ]
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2025-08-27 15:00:30 Duration: 35m19s Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2025-08-27 15:14:12 Duration: 5s559ms Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2025-08-27 15:07:18 Duration: 5s308ms Bind query: yes
16 38s941ms 10m7s 2m33s 5 12m45s select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, to_char(cdr.mod_tm, ?) from pub2.gene_chem_reference gcr, pub2.chem_disease_reference cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = ? and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Aug 26 18 5 12m45s 2m33s [ User: load - Total duration: 10m7s - Times executed: 1 ]
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select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = 'does not affect');
Date: 2025-08-26 18:02:38 Duration: 10m7s Database: ctdprd51 User: load Bind query: yes
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select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = 'does not affect');
Date: 2025-08-26 18:22:34 Duration: 40s38ms Bind query: yes
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select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub2.GENE_CHEM_REFERENCE gcr, pub2.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = 'does not affect');
Date: 2025-08-26 18:33:26 Duration: 39s522ms Bind query: yes
17 5s483ms 7m18s 54s33ms 60 54m1s select * from pgbulkload.pg_bulkload (?);Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Aug 26 14 14 6m45s 28s954ms 15 24 22m17s 55s736ms 17 3 1m6s 22s316ms 20 4 8m47s 2m11s 21 3 6m59s 2m19s 22 11 7m44s 42s191ms 23 1 20s815ms 20s815ms [ User: load - Total duration: 15m15s - Times executed: 16 ]
[ Application: pg_bulkload - Total duration: 15m15s - Times executed: 16 ]
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.GENE_DISEASE_REFERENCE,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.log,parse-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.DUPE}');
Date: 2025-08-26 20:32:46 Duration: 7m18s Database: ctdprd51 User: load Application: pg_bulkload Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.DAG_PATH,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.log,parse-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.DUPE}');
Date: 2025-08-26 21:04:39 Duration: 5m16s Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=edit.DB_LINK,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.log,parse-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.DUPE}');
Date: 2025-08-26 14:58:44 Duration: 4m22s Bind query: yes
18 5s318ms 2m26s 35s646ms 5 2m58s select phenotypeterm.nm "GOName", phenotypeterm.acc_txt "GOID", diseaseterm.nm "DiseaseName", diseaseterm.acc_db_cd || ? || diseaseterm.acc_txt "DiseaseID", pt.via_chem_qty "InferenceChemicalQty", ( select string_agg(distinct chemtermnetwork.nm, ?)) "InferenceChemicalNames", pt.via_gene_qty "InferenceGeneQty", ( select string_agg(distinct genetermnetwork.nm, ?)) "InferenceGeneSymbols" from phenotype_term_reference ptr inner join phenotype_term pt on ptr.phenotype_id = pt.phenotype_id and ptr.term_id = pt.term_id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id inner join term diseaseterm on ptr.term_id = diseaseterm.id and diseaseterm.object_type_id = ( select id from object_type where cd = ?) left outer join term genetermnetwork on ptr.via_term_id = genetermnetwork.id and genetermnetwork.object_type_id = ( select id from object_type where cd = ?) left outer join term chemtermnetwork on ptr.via_term_id = chemtermnetwork.id and chemtermnetwork.object_type_id = ( select id from object_type where cd = ?) where phenotypeterm.id in ( select dp.descendant_dag_node_id from dag_path dp where dp.ancestor_object_id = ( select id from term where nm = ?)) and ptr.source_cd = ? and ptr.phenotype_id = phenotypeterm.id and ptr.term_id = diseaseterm.id group by phenotypeterm.nm, phenotypeterm.acc_txt, diseaseterm.nm, diseaseterm.acc_db_cd || ? || diseaseterm.acc_txt, pt.via_chem_qty, pt.via_gene_qty;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Aug 27 16 5 2m58s 35s646ms [ User: qaeu - Total duration: 2m39s - Times executed: 2 ]
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SELECT /* PhenotypeDiseasesDAO */ phenotypeTerm.nm "GOName", phenotypeTerm.acc_txt "GOID", diseaseTerm.nm "DiseaseName", diseaseTerm.acc_db_cd || ':' || diseaseTerm.acc_txt "DiseaseID", pt.via_chem_qty "InferenceChemicalQty", ( SELECT STRING_AGG(DISTINCT chemTermNetwork.nm, '|')) "InferenceChemicalNames", pt.via_gene_qty "InferenceGeneQty", ( SELECT STRING_AGG(DISTINCT geneTermNetwork.nm, '|')) "InferenceGeneSymbols" FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt on ptr.phenotype_id = pt.phenotype_id AND ptr.term_id = pt.term_id INNER JOIN term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id INNER JOIN term diseaseTerm on ptr.term_id = diseaseTerm.id AND diseaseTerm.object_type_id = ( select id from object_type where cd = 'disease') LEFT OUTER JOIN term geneTermNetwork on ptr.via_term_id = geneTermNetwork.id AND geneTermNetwork.object_type_id = ( select id from object_type where cd = 'gene') LEFT OUTER JOIN term chemTermNetwork on ptr.via_term_id = chemTermNetwork.id AND chemTermNetwork.object_type_id = ( select id from object_type where cd = 'chem') WHERE phenotypeTerm.id IN ( SELECT dp.descendant_dag_node_id FROM dag_path dp WHERE dp.ancestor_object_id = ( select id from term where nm = 'biological_process')) AND ptr.source_cd = 'I' AND ptr.phenotype_id = phenotypeTerm.id AND ptr.term_id = diseaseTerm.id GROUP BY phenotypeTerm.nm, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.acc_db_cd || ':' || diseaseTerm.acc_txt, pt.via_chem_qty, pt.via_gene_qty;
Date: 2025-08-27 16:12:28 Duration: 2m26s Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* PhenotypeDiseasesDAO */ phenotypeTerm.nm "GOName", phenotypeTerm.acc_txt "GOID", diseaseTerm.nm "DiseaseName", diseaseTerm.acc_db_cd || ':' || diseaseTerm.acc_txt "DiseaseID", pt.via_chem_qty "InferenceChemicalQty", ( SELECT STRING_AGG(DISTINCT chemTermNetwork.nm, '|')) "InferenceChemicalNames", pt.via_gene_qty "InferenceGeneQty", ( SELECT STRING_AGG(DISTINCT geneTermNetwork.nm, '|')) "InferenceGeneSymbols" FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt on ptr.phenotype_id = pt.phenotype_id AND ptr.term_id = pt.term_id INNER JOIN term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id INNER JOIN term diseaseTerm on ptr.term_id = diseaseTerm.id AND diseaseTerm.object_type_id = ( select id from object_type where cd = 'disease') LEFT OUTER JOIN term geneTermNetwork on ptr.via_term_id = geneTermNetwork.id AND geneTermNetwork.object_type_id = ( select id from object_type where cd = 'gene') LEFT OUTER JOIN term chemTermNetwork on ptr.via_term_id = chemTermNetwork.id AND chemTermNetwork.object_type_id = ( select id from object_type where cd = 'chem') WHERE phenotypeTerm.id IN ( SELECT dp.descendant_dag_node_id FROM dag_path dp WHERE dp.ancestor_object_id = ( select id from term where nm = 'molecular_function')) AND ptr.source_cd = 'I' AND ptr.phenotype_id = phenotypeTerm.id AND ptr.term_id = diseaseTerm.id GROUP BY phenotypeTerm.nm, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.acc_db_cd || ':' || diseaseTerm.acc_txt, pt.via_chem_qty, pt.via_gene_qty;
Date: 2025-08-27 16:14:25 Duration: 12s785ms Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* PhenotypeDiseasesDAO */ phenotypeTerm.nm "GOName", phenotypeTerm.acc_txt "GOID", diseaseTerm.nm "DiseaseName", diseaseTerm.acc_db_cd || ':' || diseaseTerm.acc_txt "DiseaseID", pt.via_chem_qty "InferenceChemicalQty", ( SELECT STRING_AGG(DISTINCT chemTermNetwork.nm, '|')) "InferenceChemicalNames", pt.via_gene_qty "InferenceGeneQty", ( SELECT STRING_AGG(DISTINCT geneTermNetwork.nm, '|')) "InferenceGeneSymbols" FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt on ptr.phenotype_id = pt.phenotype_id AND ptr.term_id = pt.term_id INNER JOIN term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id INNER JOIN term diseaseTerm on ptr.term_id = diseaseTerm.id AND diseaseTerm.object_type_id = ( select id from object_type where cd = 'disease') LEFT OUTER JOIN term geneTermNetwork on ptr.via_term_id = geneTermNetwork.id AND geneTermNetwork.object_type_id = ( select id from object_type where cd = 'gene') LEFT OUTER JOIN term chemTermNetwork on ptr.via_term_id = chemTermNetwork.id AND chemTermNetwork.object_type_id = ( select id from object_type where cd = 'chem') WHERE phenotypeTerm.id IN ( SELECT dp.descendant_dag_node_id FROM dag_path dp WHERE dp.ancestor_object_id = ( select id from term where nm = 'biological_process')) AND ptr.source_cd = 'I' AND ptr.phenotype_id = phenotypeTerm.id AND ptr.term_id = diseaseTerm.id GROUP BY phenotypeTerm.nm, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.acc_db_cd || ':' || diseaseTerm.acc_txt, pt.via_chem_qty, pt.via_gene_qty;
Date: 2025-08-27 16:12:41 Duration: 7s49ms Bind query: yes
19 7s334ms 2m24s 35s23ms 5 2m55s select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Aug 24 01 5 2m55s 35s23ms [ User: pubeu - Total duration: 2m55s - Times executed: 5 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2110136') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2025-08-24 01:13:58 Duration: 2m24s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2110136') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2025-08-24 01:09:32 Duration: 7s784ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2110136') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2025-08-24 01:08:02 Duration: 7s674ms Database: ctdprd51 User: pubeu Bind query: yes
20 8s717ms 32s562ms 14s866ms 8 1m58s select ? "Input", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = d.id) "DiseaseCategories", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(distinct r.acc_txt, ?) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id where d.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by d.nm_sort, g.nm, "DirectEvidence", c.nm;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Aug 28 08 8 1m58s 14s866ms [ User: pubeu - Total duration: 45s137ms - Times executed: 4 ]
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'mesh:d008113' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2110226) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2025-08-28 08:01:11 Duration: 32s562ms Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'mesh:d002471' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2111847) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2025-08-28 08:02:46 Duration: 18s371ms Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'mesh:d006528' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2113070) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2025-08-28 08:00:38 Duration: 15s387ms Database: ctdprd51 User: pubeu Bind query: yes
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
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Events
Log levels
Key values
- 81,191 Event entries
- (EVENTLOG entries are formaly LOG level entries that are not queries)
Events distribution (except queries)
Key values
- 0 PANIC entries
- 2 FATAL entries
- 28 ERROR entries
- 1318 WARNING entries
- 46 EVENTLOG entries
Most Frequent Errors/Events
Key values
- 1,041 Max number of times the same event was reported
- 1,394 Total events found
Rank Times reported Error 1 1,041 WARNING: skipping "..." --- only table or database owner can vacuum it
Times Reported Most Frequent Error / Event #1
Day Hour Count Aug 27 03 1,041 2 224 WARNING: skipping "..." --- only superuser or database owner can vacuum it
Times Reported Most Frequent Error / Event #2
Day Hour Count Aug 27 03 224 3 43 WARNING: skipping "..." --- only superuser can vacuum it
Times Reported Most Frequent Error / Event #3
Day Hour Count Aug 27 03 43 4 24 ERROR: unexpected EOF on client connection with an open transaction
Times Reported Most Frequent Error / Event #4
Day Hour Count Aug 27 14 16 16 8 5 19 LOG: could not receive data from client: Connection timed out
Times Reported Most Frequent Error / Event #5
Day Hour Count Aug 26 20 3 Aug 27 18 4 19 5 Aug 29 17 7 6 16 ERROR: invalid byte sequence for encoding
Times Reported Most Frequent Error / Event #6
Day Hour Count Aug 25 11 1 Aug 26 12 6 Aug 29 00 3 03 1 04 5 - ERROR: invalid byte sequence for encoding "UTF8": 0x00
- ERROR: invalid byte sequence for encoding "UTF8": 0x00
Context: unnamed portal parameter $1
Statement: SELECT /* ObjectIdDAOImpl.LabelsAndAccs */ t.id ,t.nm ,t.nm_sort nmSort ,t.acc_txt acc ,t.acc_db_cd accDbCd FROM term t ,(SELECT li.term_id FROM term_label li WHERE UPPER(li.nm) = $1 AND li.object_type_id = 2 UNION SELECT l.object_id FROM db_link l WHERE upper( l.acc_txt ) = $2 AND l.object_type_id = 2 AND l.type_cd = 'A') ids WHERE t.id = ids.term_id ORDER BY CASE WHEN UPPER(t.nm) = $3 THEN 1 ELSE 2 END ,t.nm_sortDate: 2025-08-25 11:54:41 Database: ctdprd51 Application: User: pubeu Remote:
Context: unnamed portal parameter $1
Statement: SELECT /* GeneIdBySymbolAccDAO */ t.id ,t.nm ,t.nm_sort nmSort ,t.acc_txt acc ,t.acc_db_cd accDbCd FROM term t ,(SELECT li.term_id FROM term_label li INNER JOIN term_label_type lti ON li.term_label_type_id = lti.id AND li.object_type_id = lti.object_type_id AND UPPER(li.nm) = $1 AND lti.object_type_id = 4 AND lti.nm = 'SYMBOL' UNION SELECT l.object_id FROM db_link l WHERE l.acc_txt = $2 AND l.object_type_id = 4 AND l.type_cd = 'A') ids WHERE t.id = ids.term_id ORDER BY CASE WHEN UPPER(t.nm) = $3 THEN 1 ELSE 2 END ,t.nm_sortDate: 2025-08-29 00:53:07 Database: ctdprd51 Application: User: pubeu Remote:
7 6 ERROR: relation "..." does not exist
Times Reported Most Frequent Error / Event #7
Day Hour Count Aug 26 16 2 Aug 27 10 1 11 1 15 1 Aug 29 13 1 - ERROR: relation "ixn_actor" does not exist
- ERROR: relation "db_link" does not exist at character 15
- ERROR: relation "pubx.db_link" does not exist at character 220
Statement: vacuum FULL analyze ixn_actor
Date: 2025-08-26 16:01:15
Statement: select * from db_link limit 100
Date: 2025-08-26 16:08:07
Statement: select min( to_char ( create_tm, 'yyyymmdd' ) ), max(to_char ( create_tm, 'yyyymmdd' ))--reference_acc_txt, create_by, create_tm, sent_tm from reference_contact where reference_acc_txt in ( select acc_txt from pubX.db_link l where object_type_id = ( select id from object_type where cd = 'reference' ) AND l.type_cd = 'A' AND l.is_primary = true AND (SELECT r.has_ixns OR r.has_diseases or r.has_exposures -- !! CHANGE PUB SCHEMA QUALIFIER TO LIVE/QA SCHEMA !! FROM pub2.reference r WHERE r.id = l.object_id) ) and sent_tm is null
Date: 2025-08-27 10:38:32 Database: ctdprd51 Application: pgAdmin 4 - CONN:3997196 User: edit Remote:
8 6 WARNING: there is no transaction in progress
Times Reported Most Frequent Error / Event #8
Day Hour Count Aug 27 03 2 06 4 9 3 WARNING: there is already a transaction in progress
Times Reported Most Frequent Error / Event #9
Day Hour Count Aug 27 11 3 10 2 LOG: could not send data to client: Broken pipe
Times Reported Most Frequent Error / Event #10
Day Hour Count Aug 24 10 2 11 2 ERROR: syntax error at or near "..."
Times Reported Most Frequent Error / Event #11
Day Hour Count Aug 26 16 1 Aug 28 06 1 - ERROR: syntax error at or near "and" at character 168
- ERROR: syntax error at or near ")" at character 4810
Statement: select distinct t.nm, tl.nm from pub1.term_label tl ,pub1.term t where ( t.nm, tl.nm ) not in ( select lt.nm from load.term lt ,load.term_label ltl and lt.id = ltl.term_id ) and t.id = tl.term_id limit 100
Date: 2025-08-26 16:12:06
Statement: select distinct e.reference_acc_txt as "Reference", pref.abbr_authors_txt as "Author", referenceExp.author_summary as "AuthorSummary", (Select STRING_AGG( distinct eventproject.project_nm, '|')) as "AssociatedStudyTitles", eevent.collection_start_yr as "EnrollmentStartYear", eevent.collection_end_yr as "EnrollmentEndYear", (Select STRING_AGG( distinct studyFactor.nm, '|')) as "StudyFactors", (Select STRING_AGG(distinct stressorSrcType.nm, '|')) as "StressorSourceCategory", stressor.chem_term_nm as "ExposureStressorName", stressor.src_details as "StressorSourceDetails", stressor.sample_qty as "NumberOfStressorSamples", stressor.note as "StressorNotes", ereceptor.qty as "NumberOfReceptors", ereceptor.description as "Receptors", ereceptor.term_nm as "ReceptorDescription", ereceptor.term_acc_txt as "ReceptorID", ereceptor.note as "ReceptorNotes", (Select STRING_AGG(distinct COALESCE( COALESCE(NULLIF(CAST(receptorTobaccoUse.pct as int),0)) || '% ' || tobaccoUse.nm, COALESCE(COALESCE(NULLIF(CAST(receptorTobaccoUse.pct as int),0)) || '% ' , tobaccoUse.nm)), '|')) as "SmokingStatus", ereceptor.age || ' ' || age_uom.nm as "Age", age_qualifier.nm as "AgeQualifier", (Select STRING_AGG(distinct COALESCE( COALESCE(NULLIF(CAST(pct as int),0)) || '% ' || gender.nm, COALESCE(COALESCE(NULLIF(CAST(pct as int),0)) || '% ' , gender.nm)), '|') from exp_receptor_gender expgender left outer join gender on expgender.gender_id=gender.id where exp_receptor_id = ereceptor.id ) as "Sex", (Select STRING_AGG(distinct COALESCE( COALESCE(NULLIF(CAST(receptorRace.pct as int),0)) || '% ' || race.nm, COALESCE(COALESCE(NULLIF(CAST(receptorRace.pct as int),0)) || '% ' , race.nm)), '|')) as "Race", (Select STRING_AGG( distinct eventAssayMethod.nm, '|')) as "Methods" , eevent.detection_limit as "DetectionLimit", eevent.detection_limit_uom as "DetectionLimitUnitsOfMeasurement", eevent.detection_freq as "DetectionFrequency", emedium.nm as "Medium", eevent.exp_marker_term_nm as "ExposureMarker", eevent.exp_marker_lvl as "MarkerLevel", eevent.assay_uom as "MarkerUnitsOfMeasurement", eevent.assay_measurement_stat as "MarkerMeasurementStatistic", eevent.assay_note as "AssayNotes", (Select STRING_AGG( distinct country.nm, '|')) as "StudyCountries", (Select STRING_AGG( distinct eventLocation.geographic_region_nm, '|')) as "StateOrProvince", (Select STRING_AGG( distinct eventLocation.locality_txt, '|')) as "CityTownRegionOrArea", eevent.note as "ExposureEventNotes", eiot.description as "OutcomeRelationship", outcome.disease_term_nm as "DiseaseName", outcome.phenotype_action_degree_type_nm as "PhenotypeActionDegreeType", outcome.phenotype_term_nm as "PhenotypeName", (Select STRING_AGG( distinct expAnatomy.anatomy_term_nm, '|')) as "Anatomy", outcome.note as "ExposureOutcomeNotes" from exposure e left outer join reference pref on pref.acc_txt = e.reference_acc_txt left outer join reference_exp referenceExp on referenceExp.reference_acc_txt = e.reference_acc_txt left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id left outer join study_factor studyFactor on studyFactor.id = expStudyFactor.study_factor_id left outer join exp_event_project eventproject on eventproject.exp_event_id = e.exp_event_id inner join exp_stressor stressor on e.exp_stressor_id = stressor.id left outer join exp_receptor ereceptor on e.exp_receptor_id = ereceptor.id left outer join age_uom age_uom on ereceptor.age_uom_id = age_uom.id left outer join age_qualifier age_qualifier on ereceptor.age_qualifier_id = age_qualifier.id left outer join exp_event eevent on e.exp_event_id = eevent.id left outer join medium emedium on eevent.medium_id = emedium.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType on esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse on ereceptor.id = receptorTobaccoUse.exp_receptor_id left outer join tobacco_use tobaccoUse on receptorTobaccoUse.tobacco_use_id = tobaccoUse.id left outer join exp_receptor_race receptorRace on ereceptor.id = receptorRace.exp_receptor_id left outer join race race on receptorRace.race_id = race.id left outer join exp_event_location eventLocation on eevent.id = eventLocation.exp_event_id left outer join country on eventLocation.country_id = country.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join exp_anatomy expAnatomy on outcome.id = expAnatomy.exp_outcome_id left outer join exp_event_assay_method eventAssayMethod on eevent.id = eventAssayMethod.exp_event_id where ereceptor.term_acc_txt in (select acc_txt from term where id in )) or eevent.exp_marker_acc_txt in (select acc_txt from term where id in )) group by "Reference", "Author", "AuthorSummary", "EnrollmentStartYear", "EnrollmentEndYear", "ExposureStressorName", "StressorSourceDetails", "NumberOfStressorSamples", "StressorNotes", "NumberOfReceptors", "Receptors", "ReceptorDescription", "ReceptorID", "ReceptorNotes", "Age", "AgeQualifier", "DetectionLimit", "DetectionLimitUnitsOfMeasurement", "DetectionFrequency", "Medium", "ExposureMarker", "MarkerLevel", "MarkerUnitsOfMeasurement", "MarkerMeasurementStatistic", "AssayNotes", "ExposureEventNotes", "OutcomeRelationship", "DiseaseName", "PhenotypeActionDegreeType", "PhenotypeName", "ExposureOutcomeNotes", ereceptor.id, eventLocation.exp_event_id ;
Date: 2025-08-28 06:53:22 Database: ctdprd51 Application: User: pubeu Remote:
12 2 FATAL: connection to client lost
Times Reported Most Frequent Error / Event #12
Day Hour Count Aug 24 10 2 13 1 ERROR: column "..." does not exist
Times Reported Most Frequent Error / Event #13
Day Hour Count Aug 26 16 1 - ERROR: column "acc_txt" does not exist at character 32
Statement: select * from term_label where acc_txt = '461054-93-3'
Date: 2025-08-26 16:16:54 Database: ctdprd51 Application: pgAdmin 4 - CONN:1161282 User: pub1 Remote:
14 1 ERROR: subquery has too few columns
Times Reported Most Frequent Error / Event #14
Day Hour Count Aug 26 16 1 - ERROR: subquery has too few columns at character 92
Statement: select distinct t.nm, tl.nm from pub1.term_label tl ,pub1.term t where ( t.nm, tl.nm ) not in ( select lt.nm from load.term lt ,load.term_label ltl where lt.id = ltl.term_id ) and t.id = tl.term_id limit 100
Date: 2025-08-26 16:12:13
15 1 ERROR: function count(...) does not exist
Times Reported Most Frequent Error / Event #15
Day Hour Count Aug 26 16 1 - ERROR: function count(character varying, character varying) does not exist at character 8
Hint: No function matches the given name and argument types. You might need to add explicit type casts.
Statement: select count( distinct t.nm, tl.nm ) from pub1.term_label tl ,pub1.term t where ( t.nm, tl.nm ) not in ( select lt.nm, ltl.nm from load.term lt ,load.term_label ltl where lt.id = ltl.term_id ) and t.id = tl.term_id limit 100Date: 2025-08-26 16:13:59
16 1 LOG: could not receive data from client: Connection reset by peer
Times Reported Most Frequent Error / Event #16
Day Hour Count Aug 29 13 1 17 1 ERROR: function get_ixn_prose(...) does not exist
Times Reported Most Frequent Error / Event #17
Day Hour Count Aug 26 14 1 - ERROR: function get_ixn_prose(integer) does not exist at character 66
Hint: No function matches the given name and argument types. You might need to add explicit type casts.
Statement: select reference_acc_txt ,taxon_acc_txt ,pubTerm.nm ,get_ixn_prose( ixn_id ) ,create_by ,create_tm from edit.reference_ixn ri ,pub1.term pubTerm -- set to CURRENT PRODUCTION PUB!!!!! where taxon_acc_txt not in ( select acc_txt from load.term where object_type_id = ( select id from edit.object_type where cd = 'taxon' ) ) and pubTerm.acc_txt = ri.taxon_acc_txt and object_type_id = ( select id from edit.object_type where cd = 'taxon' ) and taxon_acc_txt is not null and taxon_acc_txt <> ''Date: 2025-08-26 14:35:37 Database: ctdprd51 Application: pgAdmin 4 - CONN:3657194 User: load Remote:
18 1 WARNING: is not a PostgreSQL server process
Times Reported Most Frequent Error / Event #18
Day Hour Count Aug 27 11 1