pgBadger-
Global information
- Generated on Sun Jul 5 04:15:03 2026
- Log file: /project/archive/log/postgres/dbprd51/postgresql.log-20260704
- Parsed 15,527 log entries in 2s
- Log start from 2026-07-04 00:00:01 to 2026-07-04 23:59:04
-
Overview
Global Stats
- 63 Number of unique normalized queries
- 64 Number of queries
- 1h47m34s Total query duration
- 2026-07-04 00:09:23 First query
- 2026-07-04 20:55:39 Last query
- 1 queries/s at 2026-07-04 18:12:46 Query peak
- 1h47m34s Total query duration
- 0ms Prepare/parse total duration
- 0ms Bind total duration
- 1h47m34s Execute total duration
- 0 Number of events
- 0 Number of unique normalized events
- 0 Max number of times the same event was reported
- 0 Number of cancellation
- 2 Total number of automatic vacuums
- 11 Total number of automatic analyzes
- 0 Number temporary file
- 0 Max size of temporary file
- 0.00 B Average size of temporary file
- 1,891 Total number of sessions
- 49 sessions at 2026-07-04 00:05:10 Session peak
- 39d22h46m19s Total duration of sessions
- 30m25s Average duration of sessions
- 0 Average queries per session
- 3s413ms Average queries duration per session
- 30m21s Average idle time per session
- 1,891 Total number of connections
- 9 connections/s at 2026-07-04 05:45:08 Connection peak
- 2 Total number of databases
SQL Traffic
Key values
- 1 queries/s Query Peak
- 2026-07-04 18:12:46 Date
SELECT Traffic
Key values
- 1 queries/s Query Peak
- 2026-07-04 15:42:25 Date
INSERT/UPDATE/DELETE Traffic
Key values
- 1 queries/s Query Peak
- 2026-07-04 18:12:46 Date
Queries duration
Key values
- 1h47m34s Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jul 04 00 2 0ms 9m21s 4m44s 0ms 0ms 9m28s 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 1 0ms 6s399ms 6s399ms 0ms 0ms 6s399ms 06 0 0ms 0ms 0ms 0ms 0ms 0ms 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 1 0ms 8s66ms 8s66ms 0ms 0ms 8s66ms 09 0 0ms 0ms 0ms 0ms 0ms 0ms 10 1 0ms 6s332ms 6s332ms 0ms 0ms 6s332ms 11 0 0ms 0ms 0ms 0ms 0ms 0ms 12 0 0ms 0ms 0ms 0ms 0ms 0ms 13 0 0ms 0ms 0ms 0ms 0ms 0ms 14 0 0ms 0ms 0ms 0ms 0ms 0ms 15 3 0ms 20s903ms 15s827ms 0ms 19s992ms 20s903ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 32 0ms 27m7s 1m30s 1m29s 7m14s 27m52s 19 23 0ms 27m51s 2m6s 1m29s 1m51s 27m51s 20 1 0ms 5s569ms 5s569ms 0ms 0ms 5s569ms 21 0 0ms 0ms 0ms 0ms 0ms 0ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jul 04 00 1 0 9m21s 0ms 0ms 9m21s 01 0 0 0ms 0ms 0ms 0ms 02 0 0 0ms 0ms 0ms 0ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 1 0 6s399ms 0ms 0ms 6s399ms 06 0 0 0ms 0ms 0ms 0ms 07 0 0 0ms 0ms 0ms 0ms 08 1 0 8s66ms 0ms 0ms 8s66ms 09 0 0 0ms 0ms 0ms 0ms 10 1 0 6s332ms 0ms 0ms 6s332ms 11 0 0 0ms 0ms 0ms 0ms 12 0 0 0ms 0ms 0ms 0ms 13 0 0 0ms 0ms 0ms 0ms 14 0 0 0ms 0ms 0ms 0ms 15 3 0 15s827ms 0ms 0ms 20s903ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 32 1m30s 1m1s 1m29s 27m52s 19 0 23 2m6s 59s914ms 1m29s 27m51s 20 1 0 5s569ms 0ms 0ms 5s569ms 21 0 0 0ms 0ms 0ms 0ms 22 0 0 0ms 0ms 0ms 0ms 23 0 0 0ms 0ms 0ms 0ms Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jul 04 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare Jul 04 00 0 0 0.00 0.00% 01 0 0 0.00 0.00% 02 0 0 0.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 1 1.00 0.00% 06 0 0 0.00 0.00% 07 0 0 0.00 0.00% 08 0 1 1.00 0.00% 09 0 0 0.00 0.00% 10 0 1 1.00 0.00% 11 0 0 0.00 0.00% 12 0 0 0.00 0.00% 13 0 0 0.00 0.00% 14 0 0 0.00 0.00% 15 0 3 3.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 1 1.00 0.00% 21 0 0 0.00 0.00% 22 0 0 0.00 0.00% 23 0 0 0.00 0.00% Day Hour Count Average / Second Jul 04 00 78 0.02/s 01 77 0.02/s 02 79 0.02/s 03 78 0.02/s 04 80 0.02/s 05 94 0.03/s 06 69 0.02/s 07 74 0.02/s 08 78 0.02/s 09 80 0.02/s 10 76 0.02/s 11 80 0.02/s 12 78 0.02/s 13 79 0.02/s 14 76 0.02/s 15 109 0.03/s 16 76 0.02/s 17 77 0.02/s 18 79 0.02/s 19 75 0.02/s 20 75 0.02/s 21 77 0.02/s 22 75 0.02/s 23 72 0.02/s Day Hour Count Average Duration Average idle time Jul 04 00 78 29m11s 29m4s 01 77 31m43s 31m43s 02 79 30m40s 30m40s 03 78 30m46s 30m46s 04 80 30m3s 30m3s 05 94 25m52s 25m52s 06 69 31m44s 31m44s 07 74 32m6s 32m6s 08 78 31m11s 31m11s 09 80 30m1s 30m1s 10 76 31m26s 31m26s 11 80 30m6s 30m6s 12 78 31m43s 31m43s 13 79 30m26s 30m26s 14 76 31m49s 31m49s 15 109 21m29s 21m28s 16 76 32m43s 32m43s 17 77 31m40s 31m40s 18 78 31m43s 31m6s 19 76 32m47s 32m8s 20 75 31m21s 31m21s 21 77 32m23s 32m23s 22 75 30m26s 30m26s 23 72 31m46s 31m46s -
Connections
Established Connections
Key values
- 9 connections Connection Peak
- 2026-07-04 05:45:08 Date
Connections per database
Key values
- ctdprd51 Main Database
- 1,891 connections Total
Connections per user
Key values
- pubeu Main User
- 1,891 connections Total
-
Sessions
Simultaneous sessions
Key values
- 49 sessions Session Peak
- 2026-07-04 00:05:10 Date
Histogram of session times
Key values
- 1,762 1800000-3600000ms duration
Sessions per database
Key values
- ctdprd51 Main Database
- 1,891 sessions Total
Sessions per user
Key values
- pubeu Main User
- 1,891 sessions Total
Sessions per host
Key values
- 10.12.5.53 Main Host
- 1,891 sessions Total
-
Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 35,146 buffers Checkpoint Peak
- 2026-07-04 19:40:19 Date
- 1619.738 seconds Highest write time
- 0.003 seconds Sync time
Checkpoints Wal files
Key values
- 0 files Wal files usage Peak
- 2026-07-04 21:15:36 Date
Checkpoints distance
Key values
- 109.35 Mo Distance Peak
- 2026-07-04 20:51:52 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time Jul 04 00 770 77.361s 0.004s 77.416s 01 190 19.227s 0.003s 19.237s 02 208 21.02s 0.002s 21.028s 03 228 23.006s 0.002s 23.014s 04 221 22.311s 0.002s 22.319s 05 190 19.19s 0.002s 19.198s 06 237 23.904s 0.002s 23.912s 07 212 21.414s 0.002s 21.422s 08 44 4.586s 0.002s 4.596s 09 390 39.25s 0.002s 39.259s 10 32 3.375s 0.002s 3.383s 11 40 4.186s 0.002s 4.195s 12 105 10.697s 0.002s 10.706s 13 28 2.979s 0.002s 2.989s 14 32 3.374s 0.002s 3.384s 15 23 2.491s 0.002s 2.501s 16 20 2.118s 0.001s 2.122s 17 27 2.889s 0.002s 2.898s 18 37 3.794s 0.001s 3.797s 19 35,146 1,619.738s 0.001s 1,619.742s 20 8,259 827.063s 0.002s 827.086s 21 1,389 139.292s 0.002s 139.301s 22 127 12.896s 0.002s 12.905s 23 168 17.006s 0.002s 17.015s Day Hour Added Removed Recycled Synced files Longest sync Average sync Jul 04 00 0 1 0 70 0.001s 0.002s 01 0 0 0 25 0.001s 0.002s 02 0 0 0 25 0.001s 0.002s 03 0 0 0 26 0.001s 0.002s 04 0 0 0 26 0.001s 0.002s 05 0 0 0 20 0.001s 0.002s 06 0 0 0 28 0.001s 0.002s 07 0 0 0 20 0.001s 0.002s 08 0 0 0 19 0.001s 0.002s 09 0 0 0 35 0.001s 0.002s 10 0 0 0 18 0.001s 0.002s 11 0 0 0 18 0.001s 0.002s 12 0 0 0 29 0.001s 0.002s 13 0 0 0 14 0.001s 0.002s 14 0 0 0 18 0.001s 0.002s 15 0 0 0 17 0.001s 0.002s 16 0 0 0 9 0.001s 0.001s 17 0 0 0 18 0.001s 0.002s 18 0 0 0 15 0.001s 0.001s 19 0 0 0 11 0.001s 0.001s 20 0 4 0 39 0.001s 0.002s 21 0 0 0 35 0.001s 0.002s 22 0 0 0 22 0.001s 0.002s 23 0 0 0 22 0.001s 0.002s Day Hour Count Avg time (sec) Jul 04 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Day Hour Mean distance Mean estimate Jul 04 00 2,064.50 kB 5,116.50 kB 01 113.00 kB 4,158.50 kB 02 141.50 kB 3,393.50 kB 03 153.50 kB 2,786.50 kB 04 147.00 kB 2,276.50 kB 05 52.00 kB 1,862.00 kB 06 239.00 kB 1,554.50 kB 07 61.00 kB 1,270.00 kB 08 53.00 kB 1,039.00 kB 09 1,109.00 kB 1,410.00 kB 10 46.50 kB 1,631.00 kB 11 63.50 kB 1,333.00 kB 12 204.50 kB 1,106.00 kB 13 51.00 kB 918.50 kB 14 41.00 kB 752.50 kB 15 43.00 kB 617.50 kB 16 22.00 kB 531.00 kB 17 31.00 kB 458.50 kB 18 66.00 kB 399.00 kB 19 14.00 kB 360.00 kB 20 28,022.50 kB 28,157.50 kB 21 5,561.00 kB 48,921.50 kB 22 72.50 kB 39,638.50 kB 23 75.50 kB 32,122.50 kB -
Temporary Files
Size of temporary files
Key values
- 0 Temp Files size Peak
- Date
Size of temporary files (5 minutes period)
NO DATASET
Number of temporary files
Key values
- 0 per second Temp Files Peak
- Date
Number of temporary files (5 minutes period)
NO DATASET
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size Jul 04 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 -
Vacuums
Vacuums / Analyzes Distribution
Key values
- 0.04 sec Highest CPU-cost vacuum
Table pg_catalog.pg_statistic
Database ctdprd51 - 2026-07-04 00:10:39 Date
- 0 sec Highest CPU-cost analyze
Table
Database ctdprd51 - Date
Average Autovacuum Duration
Key values
- 0.04 sec Highest CPU-cost vacuum
Table pg_catalog.pg_statistic
Database ctdprd51 - 2026-07-04 00:10:39 Date
Analyzes per table
Key values
- pubc.log_query (9) Main table analyzed (database ctdprd51)
- 11 analyzes Total
Vacuums per table
Key values
- pubc.log_query (1) Main table vacuumed on database ctdprd51
- 2 vacuums Total
Tuples removed per table
Key values
- pg_catalog.pg_statistic (592) Main table with removed tuples on database ctdprd51
- 592 tuples Total removed
Pages removed per table
Key values
- unknown (0) Main table with removed pages on database unknown
- 0 pages Total removed
Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs Jul 04 00 2 1 01 0 1 02 0 2 03 0 0 04 0 1 05 0 2 06 0 0 07 0 0 08 0 0 09 0 1 10 0 0 11 0 0 12 0 1 13 0 0 14 0 0 15 0 0 16 0 0 17 0 0 18 0 0 19 0 0 20 0 2 21 0 0 22 0 0 23 0 0 - 0.04 sec Highest CPU-cost vacuum
-
Locks
Locks by types
Key values
- unknown Main Lock Type
- 0 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query NO DATASET
Queries that waited the most
Rank Wait time Query NO DATASET
-
Queries
Queries by type
Key values
- 8 Total read queries
- 55 Total write queries
Queries by database
Key values
- unknown Main database
- 56 Requests
- 1h36m58s (unknown)
- Main time consuming database
Queries by user
Key values
- unknown Main user
- 84 Requests
User Request type Count Duration postgres Total 9 9m9s copy to 9 9m9s pubc Total 1 9m21s select 1 9m21s pubeu Total 14 5m23s select 14 5m23s unknown Total 84 1h42m55s copy to 82 1h42m28s others 1 6s756ms select 1 19s992ms Duration by user
Key values
- 1h42m55s (unknown) Main time consuming user
User Request type Count Duration postgres Total 9 9m9s copy to 9 9m9s pubc Total 1 9m21s select 1 9m21s pubeu Total 14 5m23s select 14 5m23s unknown Total 84 1h42m55s copy to 82 1h42m28s others 1 6s756ms select 1 19s992ms Queries by host
Key values
- unknown Main host
- 108 Requests
- 2h6m50s (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 62 Requests
- 1h37m52s (unknown)
- Main time consuming application
Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2026-07-04 12:47:08 Date
Number of cancelled queries (5 minutes period)
NO DATASET
-
Top Queries
Histogram of query times
Key values
- 45 > 10000ms duration
Slowest individual queries
Rank Duration Query 1 27m51s COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-07-04 19:32:18 ]
2 27m7s COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-07-04 18:45:00 ]
3 9m21s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2026-07-04 00:09:23 - Database: ctdprd51 - User: pubc - Application: psql ]
4 6m53s COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;[ Date: 2026-07-04 19:44:53 ]
5 6m47s COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;[ Date: 2026-07-04 18:57:28 ]
6 1m51s COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;[ Date: 2026-07-04 19:47:54 ]
7 1m44s COPY pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;[ Date: 2026-07-04 19:35:55 ]
8 1m42s COPY pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;[ Date: 2026-07-04 18:48:36 ]
9 1m22s COPY pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;[ Date: 2026-07-04 18:15:30 ]
10 1m21s COPY pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;[ Date: 2026-07-04 19:02:02 ]
11 1m4s COPY pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;[ Date: 2026-07-04 18:16:35 ]
12 1m4s COPY pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;[ Date: 2026-07-04 19:03:07 ]
13 56s679ms COPY pub1.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) TO stdout;[ Date: 2026-07-04 18:58:55 ]
14 55s780ms COPY pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-07-04 19:00:31 ]
15 55s155ms COPY pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-07-04 18:13:58 ]
16 52s429ms COPY pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;[ Date: 2026-07-04 19:37:20 ]
17 51s550ms COPY pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;[ Date: 2026-07-04 18:50:01 ]
18 44s714ms COPY pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;[ Date: 2026-07-04 18:45:49 ]
19 44s409ms COPY pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;[ Date: 2026-07-04 19:33:07 ]
20 44s230ms COPY load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) TO stdout;[ Date: 2026-07-04 18:12:17 ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 27m51s 1 27m51s 27m51s 27m51s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jul 04 19 1 27m51s 27m51s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-07-04 19:32:18 Duration: 27m51s
2 27m7s 1 27m7s 27m7s 27m7s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jul 04 18 1 27m7s 27m7s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-07-04 18:45:00 Duration: 27m7s
3 9m21s 1 9m21s 9m21s 9m21s select maint_query_logs_archive ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jul 04 00 1 9m21s 9m21s [ User: pubc - Total duration: 9m21s - Times executed: 1 ]
[ Application: psql - Total duration: 9m21s - Times executed: 1 ]
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-07-04 00:09:23 Duration: 9m21s Database: ctdprd51 User: pubc Application: psql
4 6m53s 1 6m53s 6m53s 6m53s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jul 04 19 1 6m53s 6m53s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-07-04 19:44:53 Duration: 6m53s
5 6m47s 1 6m47s 6m47s 6m47s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jul 04 18 1 6m47s 6m47s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-07-04 18:57:28 Duration: 6m47s
6 1m51s 1 1m51s 1m51s 1m51s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jul 04 19 1 1m51s 1m51s -
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-07-04 19:47:54 Duration: 1m51s
7 1m44s 1 1m44s 1m44s 1m44s copy pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jul 04 19 1 1m44s 1m44s -
COPY pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-07-04 19:35:55 Duration: 1m44s
8 1m42s 1 1m42s 1m42s 1m42s copy pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jul 04 18 1 1m42s 1m42s -
COPY pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-07-04 18:48:36 Duration: 1m42s
9 1m22s 1 1m22s 1m22s 1m22s copy pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jul 04 18 1 1m22s 1m22s -
COPY pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-07-04 18:15:30 Duration: 1m22s
10 1m21s 1 1m21s 1m21s 1m21s copy pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jul 04 19 1 1m21s 1m21s -
COPY pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-07-04 19:02:02 Duration: 1m21s
11 1m4s 1 1m4s 1m4s 1m4s copy pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jul 04 18 1 1m4s 1m4s -
COPY pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-07-04 18:16:35 Duration: 1m4s
12 1m4s 1 1m4s 1m4s 1m4s copy pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jul 04 19 1 1m4s 1m4s -
COPY pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-07-04 19:03:07 Duration: 1m4s
13 56s679ms 1 56s679ms 56s679ms 56s679ms copy pub1.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jul 04 18 1 56s679ms 56s679ms -
COPY pub1.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-07-04 18:58:55 Duration: 56s679ms
14 55s780ms 1 55s780ms 55s780ms 55s780ms copy pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jul 04 19 1 55s780ms 55s780ms -
COPY pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-07-04 19:00:31 Duration: 55s780ms
15 55s155ms 1 55s155ms 55s155ms 55s155ms copy pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jul 04 18 1 55s155ms 55s155ms -
COPY pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-07-04 18:13:58 Duration: 55s155ms
16 52s429ms 1 52s429ms 52s429ms 52s429ms copy pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jul 04 19 1 52s429ms 52s429ms -
COPY pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-07-04 19:37:20 Duration: 52s429ms
17 51s550ms 1 51s550ms 51s550ms 51s550ms copy pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jul 04 18 1 51s550ms 51s550ms -
COPY pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-07-04 18:50:01 Duration: 51s550ms
18 44s714ms 1 44s714ms 44s714ms 44s714ms copy pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jul 04 18 1 44s714ms 44s714ms -
COPY pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-07-04 18:45:49 Duration: 44s714ms
19 44s409ms 1 44s409ms 44s409ms 44s409ms copy pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jul 04 19 1 44s409ms 44s409ms -
COPY pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-07-04 19:33:07 Duration: 44s409ms
20 44s230ms 1 44s230ms 44s230ms 44s230ms copy load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jul 04 18 1 44s230ms 44s230ms -
COPY load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) TO stdout;
Date: 2026-07-04 18:12:17 Duration: 44s230ms
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 2 40s896ms 19s992ms 20s903ms 20s448ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jul 04 15 2 40s896ms 20s448ms [ User: pubeu - Total duration: 20s903ms - Times executed: 1 ]
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2200732') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2026-07-04 15:42:25 Duration: 20s903ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2200732') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2026-07-04 15:39:44 Duration: 19s992ms Bind query: yes
2 1 27m51s 27m51s 27m51s 27m51s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jul 04 19 1 27m51s 27m51s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-07-04 19:32:18 Duration: 27m51s
3 1 27m7s 27m7s 27m7s 27m7s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jul 04 18 1 27m7s 27m7s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-07-04 18:45:00 Duration: 27m7s
4 1 9m21s 9m21s 9m21s 9m21s select maint_query_logs_archive ();Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jul 04 00 1 9m21s 9m21s [ User: pubc - Total duration: 9m21s - Times executed: 1 ]
[ Application: psql - Total duration: 9m21s - Times executed: 1 ]
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-07-04 00:09:23 Duration: 9m21s Database: ctdprd51 User: pubc Application: psql
5 1 6m53s 6m53s 6m53s 6m53s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jul 04 19 1 6m53s 6m53s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-07-04 19:44:53 Duration: 6m53s
6 1 6m47s 6m47s 6m47s 6m47s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jul 04 18 1 6m47s 6m47s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-07-04 18:57:28 Duration: 6m47s
7 1 1m51s 1m51s 1m51s 1m51s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jul 04 19 1 1m51s 1m51s -
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-07-04 19:47:54 Duration: 1m51s
8 1 1m44s 1m44s 1m44s 1m44s copy pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jul 04 19 1 1m44s 1m44s -
COPY pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-07-04 19:35:55 Duration: 1m44s
9 1 1m42s 1m42s 1m42s 1m42s copy pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jul 04 18 1 1m42s 1m42s -
COPY pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-07-04 18:48:36 Duration: 1m42s
10 1 1m22s 1m22s 1m22s 1m22s copy pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jul 04 18 1 1m22s 1m22s -
COPY pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-07-04 18:15:30 Duration: 1m22s
11 1 1m21s 1m21s 1m21s 1m21s copy pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jul 04 19 1 1m21s 1m21s -
COPY pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-07-04 19:02:02 Duration: 1m21s
12 1 1m4s 1m4s 1m4s 1m4s copy pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jul 04 18 1 1m4s 1m4s -
COPY pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-07-04 18:16:35 Duration: 1m4s
13 1 1m4s 1m4s 1m4s 1m4s copy pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jul 04 19 1 1m4s 1m4s -
COPY pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-07-04 19:03:07 Duration: 1m4s
14 1 56s679ms 56s679ms 56s679ms 56s679ms copy pub1.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jul 04 18 1 56s679ms 56s679ms -
COPY pub1.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-07-04 18:58:55 Duration: 56s679ms
15 1 55s780ms 55s780ms 55s780ms 55s780ms copy pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jul 04 19 1 55s780ms 55s780ms -
COPY pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-07-04 19:00:31 Duration: 55s780ms
16 1 55s155ms 55s155ms 55s155ms 55s155ms copy pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jul 04 18 1 55s155ms 55s155ms -
COPY pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-07-04 18:13:58 Duration: 55s155ms
17 1 52s429ms 52s429ms 52s429ms 52s429ms copy pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jul 04 19 1 52s429ms 52s429ms -
COPY pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-07-04 19:37:20 Duration: 52s429ms
18 1 51s550ms 51s550ms 51s550ms 51s550ms copy pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jul 04 18 1 51s550ms 51s550ms -
COPY pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-07-04 18:50:01 Duration: 51s550ms
19 1 44s714ms 44s714ms 44s714ms 44s714ms copy pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jul 04 18 1 44s714ms 44s714ms -
COPY pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-07-04 18:45:49 Duration: 44s714ms
20 1 44s409ms 44s409ms 44s409ms 44s409ms copy pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jul 04 19 1 44s409ms 44s409ms -
COPY pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-07-04 19:33:07 Duration: 44s409ms
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 27m51s 27m51s 27m51s 1 27m51s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jul 04 19 1 27m51s 27m51s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-07-04 19:32:18 Duration: 27m51s
2 27m7s 27m7s 27m7s 1 27m7s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jul 04 18 1 27m7s 27m7s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-07-04 18:45:00 Duration: 27m7s
3 9m21s 9m21s 9m21s 1 9m21s select maint_query_logs_archive ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jul 04 00 1 9m21s 9m21s [ User: pubc - Total duration: 9m21s - Times executed: 1 ]
[ Application: psql - Total duration: 9m21s - Times executed: 1 ]
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-07-04 00:09:23 Duration: 9m21s Database: ctdprd51 User: pubc Application: psql
4 6m53s 6m53s 6m53s 1 6m53s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jul 04 19 1 6m53s 6m53s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-07-04 19:44:53 Duration: 6m53s
5 6m47s 6m47s 6m47s 1 6m47s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jul 04 18 1 6m47s 6m47s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-07-04 18:57:28 Duration: 6m47s
6 1m51s 1m51s 1m51s 1 1m51s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jul 04 19 1 1m51s 1m51s -
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-07-04 19:47:54 Duration: 1m51s
7 1m44s 1m44s 1m44s 1 1m44s copy pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jul 04 19 1 1m44s 1m44s -
COPY pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-07-04 19:35:55 Duration: 1m44s
8 1m42s 1m42s 1m42s 1 1m42s copy pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jul 04 18 1 1m42s 1m42s -
COPY pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-07-04 18:48:36 Duration: 1m42s
9 1m22s 1m22s 1m22s 1 1m22s copy pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jul 04 18 1 1m22s 1m22s -
COPY pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-07-04 18:15:30 Duration: 1m22s
10 1m21s 1m21s 1m21s 1 1m21s copy pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jul 04 19 1 1m21s 1m21s -
COPY pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-07-04 19:02:02 Duration: 1m21s
11 1m4s 1m4s 1m4s 1 1m4s copy pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jul 04 18 1 1m4s 1m4s -
COPY pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-07-04 18:16:35 Duration: 1m4s
12 1m4s 1m4s 1m4s 1 1m4s copy pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jul 04 19 1 1m4s 1m4s -
COPY pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-07-04 19:03:07 Duration: 1m4s
13 56s679ms 56s679ms 56s679ms 1 56s679ms copy pub1.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jul 04 18 1 56s679ms 56s679ms -
COPY pub1.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-07-04 18:58:55 Duration: 56s679ms
14 55s780ms 55s780ms 55s780ms 1 55s780ms copy pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jul 04 19 1 55s780ms 55s780ms -
COPY pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-07-04 19:00:31 Duration: 55s780ms
15 55s155ms 55s155ms 55s155ms 1 55s155ms copy pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jul 04 18 1 55s155ms 55s155ms -
COPY pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-07-04 18:13:58 Duration: 55s155ms
16 52s429ms 52s429ms 52s429ms 1 52s429ms copy pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jul 04 19 1 52s429ms 52s429ms -
COPY pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-07-04 19:37:20 Duration: 52s429ms
17 51s550ms 51s550ms 51s550ms 1 51s550ms copy pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jul 04 18 1 51s550ms 51s550ms -
COPY pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-07-04 18:50:01 Duration: 51s550ms
18 44s714ms 44s714ms 44s714ms 1 44s714ms copy pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jul 04 18 1 44s714ms 44s714ms -
COPY pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-07-04 18:45:49 Duration: 44s714ms
19 44s409ms 44s409ms 44s409ms 1 44s409ms copy pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jul 04 19 1 44s409ms 44s409ms -
COPY pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-07-04 19:33:07 Duration: 44s409ms
20 44s230ms 44s230ms 44s230ms 1 44s230ms copy load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jul 04 18 1 44s230ms 44s230ms -
COPY load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) TO stdout;
Date: 2026-07-04 18:12:17 Duration: 44s230ms
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 0ms 1 0ms 0ms 0ms ;Times Reported Time consuming bind #1
Day Hour Count Duration Avg duration Jul 03 22 1 0ms 0ms [ User: pubeu - Total duration: 3m34s - Times executed: 1 ]
-
;
Date: Duration: 0ms Database: postgres User: ctdprd51 Remote: pubeu
-
Events
Log levels
Key values
- 7,741 Event entries
- (EVENTLOG entries are formaly LOG level entries that are not queries)
Events distribution (except queries)
Key values
- 0 PANIC entries
- 0 FATAL entries
- 0 ERROR entries
- 0 WARNING entries
- 0 EVENTLOG entries
Events per 5 minutes
NO DATASET
Most Frequent Errors/Events
Key values
- 0 Max number of times the same event was reported
- 0 Total events found
Rank Times reported Error NO DATASET