pgBadger-
Global information
- Generated on Sun Aug 30 04:15:04 2026
- Log file: /project/archive/log/postgres/dbprd51/postgresql.log-20260829
- Parsed 15,258 log entries in 2s
- Log start from 2026-08-29 00:00:02 to 2026-08-29 23:59:41
-
Overview
Global Stats
- 64 Number of unique normalized queries
- 66 Number of queries
- 1h49m10s Total query duration
- 2026-08-29 00:09:29 First query
- 2026-08-29 22:33:57 Last query
- 1 queries/s at 2026-08-29 00:09:29 Query peak
- 1h49m10s Total query duration
- 0ms Prepare/parse total duration
- 0ms Bind total duration
- 1h49m10s Execute total duration
- 0 Number of events
- 0 Number of unique normalized events
- 0 Max number of times the same event was reported
- 0 Number of cancellation
- 2 Total number of automatic vacuums
- 13 Total number of automatic analyzes
- 0 Number temporary file
- 0 Max size of temporary file
- 0.00 B Average size of temporary file
- 1,855 Total number of sessions
- 56 sessions at 2026-08-29 00:44:42 Session peak
- 40d2h41m12s Total duration of sessions
- 31m8s Average duration of sessions
- 0 Average queries per session
- 3s531ms Average queries duration per session
- 31m4s Average idle time per session
- 1,855 Total number of connections
- 11 connections/s at 2026-08-29 14:46:10 Connection peak
- 2 Total number of databases
SQL Traffic
Key values
- 1 queries/s Query Peak
- 2026-08-29 00:09:29 Date
SELECT Traffic
Key values
- 1 queries/s Query Peak
- 2026-08-29 00:09:29 Date
INSERT/UPDATE/DELETE Traffic
Key values
- 1 queries/s Query Peak
- 2026-08-29 19:37:37 Date
Queries duration
Key values
- 1h49m10s Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Aug 29 00 2 0ms 9m27s 4m47s 0ms 0ms 9m34s 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 4 0ms 7s419ms 6s570ms 5s648ms 6s858ms 7s419ms 06 0 0ms 0ms 0ms 0ms 0ms 0ms 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 0 0ms 0ms 0ms 0ms 0ms 0ms 09 0 0ms 0ms 0ms 0ms 0ms 0ms 10 0 0ms 0ms 0ms 0ms 0ms 0ms 11 0 0ms 0ms 0ms 0ms 0ms 0ms 12 0 0ms 0ms 0ms 0ms 0ms 0ms 13 0 0ms 0ms 0ms 0ms 0ms 0ms 14 0 0ms 0ms 0ms 0ms 0ms 0ms 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 32 0ms 28m8s 1m31s 1m24s 1m43s 28m55s 19 25 0ms 28m30s 1m59s 1m31s 1m52s 28m30s 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 0 0ms 0ms 0ms 0ms 0ms 0ms 22 3 0ms 7s487ms 6s766ms 0ms 6s714ms 7s487ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Aug 29 00 1 0 9m27s 0ms 0ms 9m27s 01 0 0 0ms 0ms 0ms 0ms 02 0 0 0ms 0ms 0ms 0ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 4 0 6s570ms 0ms 5s648ms 7s419ms 06 0 0 0ms 0ms 0ms 0ms 07 0 0 0ms 0ms 0ms 0ms 08 0 0 0ms 0ms 0ms 0ms 09 0 0 0ms 0ms 0ms 0ms 10 0 0 0ms 0ms 0ms 0ms 11 0 0 0ms 0ms 0ms 0ms 12 0 0 0ms 0ms 0ms 0ms 13 0 0 0ms 0ms 0ms 0ms 14 0 0 0ms 0ms 0ms 0ms 15 0 0 0ms 0ms 0ms 0ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 32 1m31s 1m4s 1m24s 28m55s 19 0 25 1m59s 1m4s 1m31s 28m30s 20 0 0 0ms 0ms 0ms 0ms 21 0 0 0ms 0ms 0ms 0ms 22 3 0 6s766ms 0ms 0ms 7s487ms 23 0 0 0ms 0ms 0ms 0ms Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Aug 29 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare Aug 29 00 0 0 0.00 0.00% 01 0 0 0.00 0.00% 02 0 0 0.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 4 4.00 0.00% 06 0 0 0.00 0.00% 07 0 0 0.00 0.00% 08 0 0 0.00 0.00% 09 0 0 0.00 0.00% 10 0 0 0.00 0.00% 11 0 0 0.00 0.00% 12 0 0 0.00 0.00% 13 0 0 0.00 0.00% 14 0 0 0.00 0.00% 15 0 0 0.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 0 0.00 0.00% 22 0 3 3.00 0.00% 23 0 0 0.00 0.00% Day Hour Count Average / Second Aug 29 00 76 0.02/s 01 76 0.02/s 02 75 0.02/s 03 75 0.02/s 04 76 0.02/s 05 94 0.03/s 06 76 0.02/s 07 80 0.02/s 08 76 0.02/s 09 75 0.02/s 10 75 0.02/s 11 81 0.02/s 12 75 0.02/s 13 76 0.02/s 14 85 0.02/s 15 76 0.02/s 16 73 0.02/s 17 73 0.02/s 18 80 0.02/s 19 78 0.02/s 20 74 0.02/s 21 74 0.02/s 22 74 0.02/s 23 82 0.02/s Day Hour Count Average Duration Average idle time Aug 29 00 76 30m33s 30m26s 01 76 32m41s 32m41s 02 75 31m39s 31m39s 03 75 32m33s 32m33s 04 76 32m32s 32m32s 05 94 25m40s 25m40s 06 76 31m19s 31m19s 07 80 30m18s 30m18s 08 76 31m45s 31m45s 09 75 31m40s 31m40s 10 75 32m27s 32m27s 11 81 29m51s 29m51s 12 75 31m40s 31m40s 13 76 31m44s 31m44s 14 85 28m27s 28m27s 15 76 31m18s 31m18s 16 73 31m2s 31m2s 17 73 32m5s 32m5s 18 79 30m30s 29m53s 19 79 32m19s 31m41s 20 74 31m59s 31m59s 21 74 32m21s 32m21s 22 74 31m38s 31m37s 23 82 30m59s 30m59s -
Connections
Established Connections
Key values
- 11 connections Connection Peak
- 2026-08-29 14:46:10 Date
Connections per database
Key values
- ctdprd51 Main Database
- 1,855 connections Total
Connections per user
Key values
- pubeu Main User
- 1,855 connections Total
-
Sessions
Simultaneous sessions
Key values
- 56 sessions Session Peak
- 2026-08-29 00:44:42 Date
Histogram of session times
Key values
- 1,774 1800000-3600000ms duration
Sessions per database
Key values
- ctdprd51 Main Database
- 1,855 sessions Total
Sessions per user
Key values
- pubeu Main User
- 1,855 sessions Total
Sessions per host
Key values
- 10.12.5.46 Main Host
- 1,855 sessions Total
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Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 33,576 buffers Checkpoint Peak
- 2026-08-29 07:56:16 Date
- 1619.746 seconds Highest write time
- 0.002 seconds Sync time
Checkpoints Wal files
Key values
- 0 files Wal files usage Peak
- 2026-08-29 03:29:26 Date
Checkpoints distance
Key values
- 715.36 Mo Distance Peak
- 2026-08-29 07:56:16 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time Aug 29 00 281 28.405s 0.003s 28.418s 01 64 6.577s 0.002s 6.587s 02 64 6.587s 0.002s 6.597s 03 181 18.209s 0.002s 18.218s 04 161 16.303s 0.002s 16.312s 05 203 20.532s 0.002s 20.586s 06 80 8.195s 0.002s 8.204s 07 33,670 1,629.26s 0.002s 1,629.332s 08 105 10.693s 0.002s 10.701s 09 116 11.798s 0.002s 11.807s 10 169 17.109s 0.002s 17.118s 11 67 6.901s 0.002s 6.91s 12 36 3.778s 0.003s 3.787s 13 77 7.876s 0.002s 7.884s 14 55 5.686s 0.002s 5.715s 15 34 3.577s 0.002s 3.586s 16 516 51.85s 0.002s 51.86s 17 469 47.144s 0.002s 47.154s 18 31 3.29s 0.002s 3.3s 19 32,472 1,619.264s 0.001s 1,619.269s 20 43 4.39s 0.001s 4.395s 21 70 7.183s 0.002s 7.193s 22 55 5.687s 0.002s 5.695s 23 45 4.602s 0.001s 4.608s Day Hour Added Removed Recycled Synced files Longest sync Average sync Aug 29 00 0 0 0 64 0.001s 0.002s 01 0 0 0 21 0.001s 0.002s 02 0 0 0 20 0.001s 0.002s 03 0 0 0 32 0.001s 0.002s 04 0 0 0 32 0.001s 0.002s 05 0 1 0 41 0.001s 0.002s 06 0 0 0 23 0.001s 0.002s 07 0 22 0 47 0.001s 0.002s 08 0 0 0 30 0.001s 0.002s 09 0 0 0 28 0.001s 0.002s 10 0 0 0 33 0.001s 0.002s 11 0 0 0 21 0.001s 0.002s 12 0 0 0 18 0.001s 0.002s 13 0 0 0 21 0.001s 0.002s 14 0 0 0 18 0.001s 0.002s 15 0 0 0 18 0.001s 0.002s 16 0 0 0 29 0.001s 0.002s 17 0 0 0 39 0.001s 0.002s 18 0 0 0 27 0.001s 0.002s 19 0 0 0 10 0.001s 0.001s 20 0 0 0 12 0.001s 0.001s 21 0 0 0 23 0.001s 0.002s 22 0 0 0 22 0.001s 0.002s 23 0 0 0 12 0.001s 0.001s Day Hour Count Avg time (sec) Aug 29 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Day Hour Mean distance Mean estimate Aug 29 00 1,002.50 kB 634,572.00 kB 01 119.50 kB 514,017.50 kB 02 19.00 kB 416,366.50 kB 03 162.50 kB 337,286.00 kB 04 158.00 kB 273,232.00 kB 05 463.50 kB 221,379.00 kB 06 65.50 kB 179,355.50 kB 07 183,319.50 kB 347,971.50 kB 08 209.00 kB 281,911.00 kB 09 103.00 kB 228,365.50 kB 10 220.50 kB 185,019.50 kB 11 64.00 kB 149,878.50 kB 12 39.00 kB 121,409.50 kB 13 57.50 kB 98,352.50 kB 14 68.50 kB 79,678.00 kB 15 53.00 kB 64,550.00 kB 16 1,884.00 kB 52,490.00 kB 17 1,714.50 kB 42,993.00 kB 18 29.00 kB 34,834.00 kB 19 31.00 kB 29,705.00 kB 20 41.00 kB 26,738.00 kB 21 70.00 kB 22,872.50 kB 22 92.50 kB 18,541.50 kB 23 102.00 kB 15,824.00 kB -
Temporary Files
Size of temporary files
Key values
- 0 Temp Files size Peak
- Date
Size of temporary files (5 minutes period)
NO DATASET
Number of temporary files
Key values
- 0 per second Temp Files Peak
- Date
Number of temporary files (5 minutes period)
NO DATASET
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size Aug 29 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 -
Vacuums
Vacuums / Analyzes Distribution
Key values
- 0.02 sec Highest CPU-cost vacuum
Table pub1.term_comp_agent
Database ctdprd51 - 2026-08-29 17:37:51 Date
- 0 sec Highest CPU-cost analyze
Table
Database ctdprd51 - Date
Average Autovacuum Duration
Key values
- 0.02 sec Highest CPU-cost vacuum
Table pub1.term_comp_agent
Database ctdprd51 - 2026-08-29 17:37:51 Date
Analyzes per table
Key values
- pubc.log_query (11) Main table analyzed (database ctdprd51)
- 13 analyzes Total
Vacuums per table
Key values
- pub1.term_comp_agent (1) Main table vacuumed on database ctdprd51
- 2 vacuums Total
Vacuum throughput per table
Key values
- pub1.term_comp_agent (0.02) Max CPU elapsed for vacuum on database ctdprd51
- unknown (0 ms) Max I/O read time for vacuum on database ctdprd51
- unknown (0 ms) Max I/O write time for vacuum on database ctdprd51
Tuples removed per table
Key values
- pubc.log_query (27) Main table with removed tuples on database ctdprd51
- 27 tuples Total removed
Pages removed per table
Key values
- unknown (0) Main table with removed pages on database unknown
- 0 pages Total removed
Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs Aug 29 00 0 0 01 0 1 02 0 0 03 0 1 04 0 1 05 0 4 06 0 0 07 0 1 08 0 1 09 0 0 10 0 1 11 0 0 12 0 0 13 0 0 14 0 0 15 0 0 16 0 1 17 1 2 18 0 0 19 0 0 20 0 0 21 0 0 22 0 0 23 1 0 - 0.02 sec Highest CPU-cost vacuum
-
Locks
Locks by types
Key values
- unknown Main Lock Type
- 0 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query NO DATASET
Queries that waited the most
Rank Wait time Query NO DATASET
-
Queries
Queries by type
Key values
- 8 Total read queries
- 57 Total write queries
Queries by database
Key values
- unknown Main database
- 58 Requests
- 1h38m43s (unknown)
- Main time consuming database
Queries by user
Key values
- unknown Main user
- 137 Requests
User Request type Count Duration load Total 1 7s676ms select 1 7s676ms postgres Total 9 9m18s copy to 9 9m18s pub1 Total 1 16s282ms select 1 16s282ms pub2 Total 1 8s125ms select 1 8s125ms pubc Total 1 9m27s select 1 9m27s pubeu Total 28 4m2s select 28 4m2s qaeu Total 21 52m12s cte 1 5s88ms select 20 52m7s unknown Total 137 11h2m1s copy to 84 1h44m31s ddl 3 1m14s insert 1 2m53s others 13 1h3m38s select 36 8h9m43s Duration by user
Key values
- 11h2m1s (unknown) Main time consuming user
User Request type Count Duration load Total 1 7s676ms select 1 7s676ms postgres Total 9 9m18s copy to 9 9m18s pub1 Total 1 16s282ms select 1 16s282ms pub2 Total 1 8s125ms select 1 8s125ms pubc Total 1 9m27s select 1 9m27s pubeu Total 28 4m2s select 28 4m2s qaeu Total 21 52m12s cte 1 5s88ms select 20 52m7s unknown Total 137 11h2m1s copy to 84 1h44m31s ddl 3 1m14s insert 1 2m53s others 13 1h3m38s select 36 8h9m43s Queries by host
Key values
- unknown Main host
- 199 Requests
- 12h17m33s (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 64 Requests
- 1h39m23s (unknown)
- Main time consuming application
Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2026-08-29 07:09:39 Date
Number of cancelled queries (5 minutes period)
NO DATASET
-
Top Queries
Histogram of query times
Key values
- 43 > 10000ms duration
Slowest individual queries
Rank Duration Query 1 28m30s COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-08-29 19:33:54 ]
2 28m8s COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-08-29 18:46:08 ]
3 9m27s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2026-08-29 00:09:29 - Database: ctdprd51 - User: pubc - Application: psql ]
4 6m57s COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;[ Date: 2026-08-29 19:46:40 ]
5 6m53s COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;[ Date: 2026-08-29 18:58:46 ]
6 1m52s COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;[ Date: 2026-08-29 19:49:39 ]
7 1m44s COPY pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;[ Date: 2026-08-29 19:37:37 ]
8 1m43s COPY pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;[ Date: 2026-08-29 18:49:48 ]
9 1m22s COPY pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;[ Date: 2026-08-29 18:15:34 ]
10 1m22s COPY pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;[ Date: 2026-08-29 19:02:57 ]
11 1m4s COPY pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;[ Date: 2026-08-29 19:04:03 ]
12 1m4s COPY pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;[ Date: 2026-08-29 18:16:39 ]
13 56s201ms COPY pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-08-29 19:01:26 ]
14 56s26ms COPY pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-08-29 18:14:02 ]
15 52s703ms COPY pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, has_ccc, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;[ Date: 2026-08-29 19:39:03 ]
16 52s336ms COPY pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, has_ccc, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;[ Date: 2026-08-29 18:51:13 ]
17 47s272ms COPY pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;[ Date: 2026-08-29 19:34:46 ]
18 46s826ms COPY load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) TO stdout;[ Date: 2026-08-29 18:12:19 ]
19 46s84ms COPY pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;[ Date: 2026-08-29 18:46:58 ]
20 44s328ms COPY pub2.gene_disease (gene_id, disease_id, reference_qty, curated_reference_qty, indirect_chem_qty, exposure_reference_qty, network_score) TO stdout;[ Date: 2026-08-29 19:05:22 ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 28m30s 1 28m30s 28m30s 28m30s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Aug 29 19 1 28m30s 28m30s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-08-29 19:33:54 Duration: 28m30s
2 28m8s 1 28m8s 28m8s 28m8s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Aug 29 18 1 28m8s 28m8s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-08-29 18:46:08 Duration: 28m8s
3 9m27s 1 9m27s 9m27s 9m27s select maint_query_logs_archive ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Aug 29 00 1 9m27s 9m27s [ User: pubc - Total duration: 9m27s - Times executed: 1 ]
[ Application: psql - Total duration: 9m27s - Times executed: 1 ]
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-08-29 00:09:29 Duration: 9m27s Database: ctdprd51 User: pubc Application: psql
4 6m57s 1 6m57s 6m57s 6m57s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Aug 29 19 1 6m57s 6m57s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-08-29 19:46:40 Duration: 6m57s
5 6m53s 1 6m53s 6m53s 6m53s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Aug 29 18 1 6m53s 6m53s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-08-29 18:58:46 Duration: 6m53s
6 1m52s 1 1m52s 1m52s 1m52s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Aug 29 19 1 1m52s 1m52s -
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-08-29 19:49:39 Duration: 1m52s
7 1m44s 1 1m44s 1m44s 1m44s copy pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Aug 29 19 1 1m44s 1m44s -
COPY pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-08-29 19:37:37 Duration: 1m44s
8 1m43s 1 1m43s 1m43s 1m43s copy pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Aug 29 18 1 1m43s 1m43s -
COPY pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-08-29 18:49:48 Duration: 1m43s
9 1m22s 1 1m22s 1m22s 1m22s copy pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Aug 29 18 1 1m22s 1m22s -
COPY pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-08-29 18:15:34 Duration: 1m22s
10 1m22s 1 1m22s 1m22s 1m22s copy pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Aug 29 19 1 1m22s 1m22s -
COPY pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-08-29 19:02:57 Duration: 1m22s
11 1m4s 1 1m4s 1m4s 1m4s copy pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Aug 29 19 1 1m4s 1m4s -
COPY pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-08-29 19:04:03 Duration: 1m4s
12 1m4s 1 1m4s 1m4s 1m4s copy pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Aug 29 18 1 1m4s 1m4s -
COPY pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-08-29 18:16:39 Duration: 1m4s
13 56s201ms 1 56s201ms 56s201ms 56s201ms copy pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Aug 29 19 1 56s201ms 56s201ms -
COPY pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-08-29 19:01:26 Duration: 56s201ms
14 56s26ms 1 56s26ms 56s26ms 56s26ms copy pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Aug 29 18 1 56s26ms 56s26ms -
COPY pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-08-29 18:14:02 Duration: 56s26ms
15 52s703ms 1 52s703ms 52s703ms 52s703ms copy pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, has_ccc, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Aug 29 19 1 52s703ms 52s703ms -
COPY pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, has_ccc, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-08-29 19:39:03 Duration: 52s703ms
16 52s336ms 1 52s336ms 52s336ms 52s336ms copy pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, has_ccc, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Aug 29 18 1 52s336ms 52s336ms -
COPY pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, has_ccc, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-08-29 18:51:13 Duration: 52s336ms
17 47s272ms 1 47s272ms 47s272ms 47s272ms copy pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Aug 29 19 1 47s272ms 47s272ms -
COPY pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-08-29 19:34:46 Duration: 47s272ms
18 46s826ms 1 46s826ms 46s826ms 46s826ms copy load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Aug 29 18 1 46s826ms 46s826ms -
COPY load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) TO stdout;
Date: 2026-08-29 18:12:19 Duration: 46s826ms
19 46s84ms 1 46s84ms 46s84ms 46s84ms copy pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Aug 29 18 1 46s84ms 46s84ms -
COPY pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-08-29 18:46:58 Duration: 46s84ms
20 44s328ms 1 44s328ms 44s328ms 44s328ms copy pub2.gene_disease (gene_id, disease_id, reference_qty, curated_reference_qty, indirect_chem_qty, exposure_reference_qty, network_score) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Aug 29 19 1 44s328ms 44s328ms -
COPY pub2.gene_disease (gene_id, disease_id, reference_qty, curated_reference_qty, indirect_chem_qty, exposure_reference_qty, network_score) TO stdout;
Date: 2026-08-29 19:05:22 Duration: 44s328ms
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 2 12s812ms 6s98ms 6s714ms 6s406ms select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct r.acc_txt, ?)) as references, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id inner join reference r on gcr.reference_id = r.id left outer join term taxonterm on gcr.taxon_id = taxonterm.id where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.chem_id = any (array ( select dp.descendant_object_id from dag_path dp inner join term_label l on l.term_id = dp.ancestor_object_id where upper(l.nm) like ? and l.object_type_id = ?)) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?)) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by refcount desc, taxoncount desc, g.nm_sort;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Aug 29 22 2 12s812ms 6s406ms [ User: pubeu - Total duration: 6s98ms - Times executed: 1 ]
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id INNER JOIN reference r on gcr.reference_id = r.id LEFT OUTER JOIN term taxonTerm on gcr.taxon_id = taxonTerm.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'gene'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE 'BENZO[A]PYRENE' AND l.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY refCount DESC, taxonCount DESC, g.nm_sort;
Date: 2026-08-29 22:28:03 Duration: 6s714ms Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id INNER JOIN reference r on gcr.reference_id = r.id LEFT OUTER JOIN term taxonTerm on gcr.taxon_id = taxonTerm.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'gene'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE 'BENZO[A]PYRENE' AND l.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY refCount DESC, taxonCount DESC, g.nm_sort;
Date: 2026-08-29 22:33:57 Duration: 6s98ms Database: ctdprd51 User: pubeu Bind query: yes
2 2 12s2ms 5s648ms 6s354ms 6s1ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ? or d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Aug 29 05 2 12s2ms 6s1ms [ User: pubeu - Total duration: 6s354ms - Times executed: 1 ]
[ User: qaeu - Total duration: 5s648ms - Times executed: 1 ]
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1403103)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-08-29 05:48:50 Duration: 6s354ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1404748)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-08-29 05:43:41 Duration: 5s648ms Database: ctdprd51 User: qaeu Bind query: yes
3 1 28m30s 28m30s 28m30s 28m30s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Aug 29 19 1 28m30s 28m30s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-08-29 19:33:54 Duration: 28m30s
4 1 28m8s 28m8s 28m8s 28m8s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Aug 29 18 1 28m8s 28m8s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-08-29 18:46:08 Duration: 28m8s
5 1 9m27s 9m27s 9m27s 9m27s select maint_query_logs_archive ();Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Aug 29 00 1 9m27s 9m27s [ User: pubc - Total duration: 9m27s - Times executed: 1 ]
[ Application: psql - Total duration: 9m27s - Times executed: 1 ]
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-08-29 00:09:29 Duration: 9m27s Database: ctdprd51 User: pubc Application: psql
6 1 6m57s 6m57s 6m57s 6m57s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Aug 29 19 1 6m57s 6m57s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-08-29 19:46:40 Duration: 6m57s
7 1 6m53s 6m53s 6m53s 6m53s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Aug 29 18 1 6m53s 6m53s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-08-29 18:58:46 Duration: 6m53s
8 1 1m52s 1m52s 1m52s 1m52s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Aug 29 19 1 1m52s 1m52s -
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-08-29 19:49:39 Duration: 1m52s
9 1 1m44s 1m44s 1m44s 1m44s copy pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Aug 29 19 1 1m44s 1m44s -
COPY pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-08-29 19:37:37 Duration: 1m44s
10 1 1m43s 1m43s 1m43s 1m43s copy pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Aug 29 18 1 1m43s 1m43s -
COPY pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-08-29 18:49:48 Duration: 1m43s
11 1 1m22s 1m22s 1m22s 1m22s copy pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Aug 29 18 1 1m22s 1m22s -
COPY pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-08-29 18:15:34 Duration: 1m22s
12 1 1m22s 1m22s 1m22s 1m22s copy pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Aug 29 19 1 1m22s 1m22s -
COPY pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-08-29 19:02:57 Duration: 1m22s
13 1 1m4s 1m4s 1m4s 1m4s copy pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Aug 29 19 1 1m4s 1m4s -
COPY pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-08-29 19:04:03 Duration: 1m4s
14 1 1m4s 1m4s 1m4s 1m4s copy pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Aug 29 18 1 1m4s 1m4s -
COPY pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-08-29 18:16:39 Duration: 1m4s
15 1 56s201ms 56s201ms 56s201ms 56s201ms copy pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Aug 29 19 1 56s201ms 56s201ms -
COPY pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-08-29 19:01:26 Duration: 56s201ms
16 1 56s26ms 56s26ms 56s26ms 56s26ms copy pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Aug 29 18 1 56s26ms 56s26ms -
COPY pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-08-29 18:14:02 Duration: 56s26ms
17 1 52s703ms 52s703ms 52s703ms 52s703ms copy pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, has_ccc, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Aug 29 19 1 52s703ms 52s703ms -
COPY pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, has_ccc, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-08-29 19:39:03 Duration: 52s703ms
18 1 52s336ms 52s336ms 52s336ms 52s336ms copy pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, has_ccc, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Aug 29 18 1 52s336ms 52s336ms -
COPY pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, has_ccc, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-08-29 18:51:13 Duration: 52s336ms
19 1 47s272ms 47s272ms 47s272ms 47s272ms copy pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Aug 29 19 1 47s272ms 47s272ms -
COPY pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-08-29 19:34:46 Duration: 47s272ms
20 1 46s826ms 46s826ms 46s826ms 46s826ms copy load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Aug 29 18 1 46s826ms 46s826ms -
COPY load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) TO stdout;
Date: 2026-08-29 18:12:19 Duration: 46s826ms
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 28m30s 28m30s 28m30s 1 28m30s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Aug 29 19 1 28m30s 28m30s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-08-29 19:33:54 Duration: 28m30s
2 28m8s 28m8s 28m8s 1 28m8s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Aug 29 18 1 28m8s 28m8s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-08-29 18:46:08 Duration: 28m8s
3 9m27s 9m27s 9m27s 1 9m27s select maint_query_logs_archive ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Aug 29 00 1 9m27s 9m27s [ User: pubc - Total duration: 9m27s - Times executed: 1 ]
[ Application: psql - Total duration: 9m27s - Times executed: 1 ]
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-08-29 00:09:29 Duration: 9m27s Database: ctdprd51 User: pubc Application: psql
4 6m57s 6m57s 6m57s 1 6m57s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Aug 29 19 1 6m57s 6m57s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-08-29 19:46:40 Duration: 6m57s
5 6m53s 6m53s 6m53s 1 6m53s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Aug 29 18 1 6m53s 6m53s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-08-29 18:58:46 Duration: 6m53s
6 1m52s 1m52s 1m52s 1 1m52s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Aug 29 19 1 1m52s 1m52s -
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-08-29 19:49:39 Duration: 1m52s
7 1m44s 1m44s 1m44s 1 1m44s copy pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Aug 29 19 1 1m44s 1m44s -
COPY pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-08-29 19:37:37 Duration: 1m44s
8 1m43s 1m43s 1m43s 1 1m43s copy pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Aug 29 18 1 1m43s 1m43s -
COPY pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-08-29 18:49:48 Duration: 1m43s
9 1m22s 1m22s 1m22s 1 1m22s copy pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Aug 29 18 1 1m22s 1m22s -
COPY pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-08-29 18:15:34 Duration: 1m22s
10 1m22s 1m22s 1m22s 1 1m22s copy pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Aug 29 19 1 1m22s 1m22s -
COPY pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-08-29 19:02:57 Duration: 1m22s
11 1m4s 1m4s 1m4s 1 1m4s copy pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Aug 29 19 1 1m4s 1m4s -
COPY pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-08-29 19:04:03 Duration: 1m4s
12 1m4s 1m4s 1m4s 1 1m4s copy pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Aug 29 18 1 1m4s 1m4s -
COPY pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-08-29 18:16:39 Duration: 1m4s
13 56s201ms 56s201ms 56s201ms 1 56s201ms copy pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Aug 29 19 1 56s201ms 56s201ms -
COPY pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-08-29 19:01:26 Duration: 56s201ms
14 56s26ms 56s26ms 56s26ms 1 56s26ms copy pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Aug 29 18 1 56s26ms 56s26ms -
COPY pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-08-29 18:14:02 Duration: 56s26ms
15 52s703ms 52s703ms 52s703ms 1 52s703ms copy pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, has_ccc, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Aug 29 19 1 52s703ms 52s703ms -
COPY pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, has_ccc, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-08-29 19:39:03 Duration: 52s703ms
16 52s336ms 52s336ms 52s336ms 1 52s336ms copy pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, has_ccc, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Aug 29 18 1 52s336ms 52s336ms -
COPY pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, has_ccc, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-08-29 18:51:13 Duration: 52s336ms
17 47s272ms 47s272ms 47s272ms 1 47s272ms copy pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Aug 29 19 1 47s272ms 47s272ms -
COPY pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-08-29 19:34:46 Duration: 47s272ms
18 46s826ms 46s826ms 46s826ms 1 46s826ms copy load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Aug 29 18 1 46s826ms 46s826ms -
COPY load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) TO stdout;
Date: 2026-08-29 18:12:19 Duration: 46s826ms
19 46s84ms 46s84ms 46s84ms 1 46s84ms copy pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Aug 29 18 1 46s84ms 46s84ms -
COPY pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-08-29 18:46:58 Duration: 46s84ms
20 44s328ms 44s328ms 44s328ms 1 44s328ms copy pub2.gene_disease (gene_id, disease_id, reference_qty, curated_reference_qty, indirect_chem_qty, exposure_reference_qty, network_score) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Aug 29 19 1 44s328ms 44s328ms -
COPY pub2.gene_disease (gene_id, disease_id, reference_qty, curated_reference_qty, indirect_chem_qty, exposure_reference_qty, network_score) TO stdout;
Date: 2026-08-29 19:05:22 Duration: 44s328ms
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
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Events
Log levels
Key values
- 7,597 Event entries
- (EVENTLOG entries are formaly LOG level entries that are not queries)
Events distribution (except queries)
Key values
- 0 PANIC entries
- 0 FATAL entries
- 0 ERROR entries
- 0 WARNING entries
- 0 EVENTLOG entries
Events per 5 minutes
NO DATASET
Most Frequent Errors/Events
Key values
- 0 Max number of times the same event was reported
- 0 Total events found
Rank Times reported Error NO DATASET